MELO3C014562 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C014562
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	RING finger-like protein
Location	chr5 : 1363865 .. 1373585 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATAGTATTCATTTATAAGAAGAAGAAGCTTCGTATAAAATAATATCAAATTTCAAGTCGATCGTAATTACATAAAATATTTTCTCTCTCCGATATCCGATCCCTCCTCTTCTCTCCTACTCTAACCCTACAGATCCCTTCCTTCTCCCCTCATTTCTCCGATTCTATAATAATCTTCTCTCCAGATCCACTCCTCATCCCGCCTGATCCTTATTTCCTTCGCAATCTGTAACGCTAAGTGTCGATCTCACCGGCGAGCGGCGAGGTTTAATTTACTTTCCAGGTACGCTTTCTCACGCGCAAACATTAAGCAAATAATATTTTCCAACATCGAATCGGTTGTGGAATAGTTTTTGTAAGCGATCAGTAGAGGAATTTAGGGTGAAAATGAAGTTGAATCGTCGGCAAAAGAAAAAGAAAAAGGAAAAAGGTAGGGATGAGAAGAGAGGTTAAGTTAAAGTAAAGTAGGAGTTGAGACTGAGAGAGTGTATGAGAGAAATTGTCTGTTTGTTTGTTTTGGAGTATTGGAATAACATTGTCATCAAATCTGCTCCCTGACCATCAGAATCTTCACTGCTTCCTTCACTTTAATTCATCGCCTGCACGCTACCATTAACTTTTCTTTTCTTTTTTTCTCTCTCTCTCTCTCTCTTCTTTTTAATAAATTTTGGAAAACTTGAATTTGAACCCTACATGCATGAATCCGTAAAAGGTGTATGAATATTATTTATCTATTTATTTATTTTTTAAAGGTGAGTGTATAATGTCGTAGTTATTGGAGGCAGAGAAACTATGGTCTGTTTATGTTTTTATTATATATAAGGGTATCAAAAAGTTGATACTTTTGCTTAGTTTGTCTTCGGGTATTTTTTATTGTATAAAGGTTAAATAGCCTAAGTGTAAGTATCAATTACATATTACTATAATTCAAACTAAAACATAAAAAAAACAATTTATTTTTGAAATAGAAATTAATCGTAGCCTGTGATCATAATACTTTATTATTTATCTCAAATACTCTATATATGTTTGTGGCATTAGATACCATAGTGAGTAATTTACTTACATAATTTTTAGGATTTTTATAAACTAGATTAAAATAGTTTGCATCTTAACGTTAGTTATCATAATTTAATATTTTTTCTGTTTATATTTGTGGATGTCAGTGTCTAGACCATTTTTTGCATGCCTCCAACTAATCTCATAGGATAATCTACAAACCCTACAATATTTTAGTTTCAAGATAACTTTTCCAAGAAAATTAGTGAACCCATCTAACACTACAACATTTGGTATCAAGATAACTAAGACATTGAATCCTAGCTAGGTACCAACTACCGTTTGAATCCATGACTTTTTTATTATTAAAACGGTCAAAAAATTAATAATTTTAATAATCAATTGAGCATCCCAAAATCCCAACGATTGTCTCTAAATTTTAGTTCCTAAAGTTTTAAACTCTATTCACTTGTATTTTTGTAATGTTGTCCCTATATCGAAGTATTTAAAGAGCTCTAATTCGAAGCTTTGCAAGAACAAAAAAAAGAAAAAACAATATCTTATTCAAAAGCTTTGCAAAAAAATTATTTATTTAATTATTAATTGGTTTTTTTGTGGTGTTTTTTGTTTGATTAACATTTTATTCCATTCCTTCAATTGCATATATATTTTCTAAAAGTTTGGAAGTAAACTAAACTTTGCAATTTTGTGAAATATATGAAAAAACTACAATGCATATATATTTTCTAAAAATTTGGAAGTCAACTAAACTTGCATTTTTGGGAAATATATGAAAAATCACCAATCAATTTTGTGTCATTGCATTTTGAAAATAACAATGCAATATTAACCAAAATTATGTCTAAATCTTAATGCAATTTTAGCTTTTATTTAATATTTACATATTTCGCTGTGACAATTTTCAAACCAACCCTCTTTTAGATTTTTATTTATTTATTTTTGTCTTCAAATTTTCAAGCTTGATTACATTCTAGCTCTCTAAACAGAGCCTAAAGTGCTTTCATTACTGTTACTATTACTAAGAATGAGAACATCCAATTCAGCCATAAATAAACAACAAGAAGCCCATTTTCAATGCTTATTTGAATCCAAAATTGATAGAGAACAGAACTTAACTAAGTCTAATAGTTAAGGTCCAATCAACAGACTAATCTAAATCTAAACCACGTAATCATCAAGATGAAACCTAAATTAAACCCCAATTTACAGAAACTAACACACTCGAGCATTTAAATGACATTACAAGATGTGGCTATTTGTAGTCTTATTGAGGCATCATCTTATCTTTTTTCCTGCAATCTTTGTAAGAGTCATAATTTATCCAATATATTAAGCCAACAGATCAAAATTTCGATTTCCCTCAATTATGTTTCCACGGTTGAAACATTGATGCCGGTGAGCTCGATTTGCGCAGCCACCGTGTTGATTGCGTCAATGACATCCATTTTCCCCCGAGTCAAAGCCTCATCCACGGGAGTTTTCTCATGGCTATACACGTAAGTAACATTTGAATTGTTACAACCCGACAAAGATCCTTGTTATGTTACAATGTTTGAATTAAATCTCACAATGAACTTATAAAACATAACGTACCTGTTCAACAAGCTCAAATTGGCTCCTGCCAAGATCAACTTCTTCACCACCTAAAGAAATGTGTGAAGACAATTAGGTTTGTGTAACAATTAACAAATCTAATTGGTTCATTAACTTTCAAAACATTTATTTTTTGAAACGAGTGGAAGATCGATTAATTATTATCGACAGTTTATGAACCTATACAGGTGTTTAAGGGAACCCCTTGAAGATCAATTAAAAGTTTGGAAGCCTGTGAAAAATGAAAGCTTATAAACTAAACCGAAAAGTATTAAATATTTTAGAGCATTACCTCAATATGCCCATTCAGACATGCCCAATGCAGTGGTGTGTTCTTCTCTGCATTCAAAGCATTCACATCCTGCCCGCACTCAAAAAGGTTAGAGACATAATGGAAGGGTAAAGATTTCACGAGTAAGATTTGATAAATCCAGCCAAAGGTTTTAAAATGAAAATTGCCAACCGACCCTTCATCAGGCAGAAGATGAAAATAAATAGGAAAGTCATCGAGCTAGTTGGTGATGTTTATTCAAGGGAACAAACCAAAATGTACTATCCAAGATAAAACAAAACTACAGCAGGCTCAATAAATATAACGGGGGGTAGAGTACATTGGAACGCTTAATTAAGTTGAATTCAATCAAAAAGGGAATTGTAGCAGTCCAAATTTATTCATTTCATAGTTCAAGCAGATTGACGACAGGAACGATGATATGGATAACACAATGGATAACACAGATGCATGAAGAATAGAAGCAAAAAGCTGTTTCTTGAGAAAGAATCCTCTGTCAATTATTAGTCAGTGAGAAAATACATAGCCAATCAGCAGATAAAATTACATGAAGTAGATATCTCACCACTCCTCTATTTATGAGAAACTCCACTATTGAAAGATGTCCATTTGCAGCAGCCATGTGTAGAGCTACAATCAAATAACAGAGATTACAATAAACCGGAAAACTTGATTGCCTTCTATGTATGACTTCATCTTCAAATGGTCTAGAATTTAAATTAGAAATATATTGTTACGCTTAGAACCCATTTGCATTGATTCCCTACATGTTTAATAAAAATTTTTAAAGGACTTAGAAAACGATTCCAAATAGGTTTTTGTGCAAAAACAAAATCAATTAAGTTCTAACTTGAAATTTTTTACCGACTGTATCAGTTAATTGTAGAGTGAACAACTAAAGATAGCAGGTGTGAGTATGTTTATGTTCAATGGAGTAATTATGTTTTCTTATTAGGAACAGAAAGCTTCTTTGAAATCTTTGTAAATCTGGAGGAACATAAGTTGGAAAGTAAACTCATGAAATCTTAAAAATCTCATATCAAATGAGTGGGATTTATGATGAACACAAAACTATTGTTACCAGTTCGGCCCTCGGAATCCTTGGAATCGAGACAAACACCAGCAGAAGTAAGCCTTTCTACATCCTCCAAATCGTTGTATCTAGCAGCCTGTCAAGTGACATAAAAAAAACCTAAGTCCTCCATTGCTGAATCCTTAACTCCCCAATATATCGATCTCTCAAGTATGATGTAAATGATTTGCTACCCATGGACTTTTCAGAGTTCTAGTTGTTCATATATTTCCATTATCAAAATCACAATAGGAACGAAAGTGCAATCCATTTGGTTAAATGACCTTATAATAAGGTCAAATTGTAGAATGAATGCTTCGACAAGAAGATGAGAAGATATTCTGCAATGGAAGGAAAAGTGAACAAACCAGAAATAGAGGATTCAATAAAGCAAGAGATTGAAGATTGTACATCAACGAGATCCTCAATGTCATTCATCGTGGTTTGCACGGTGCTCTGCTCTTCTGATTGATTAGCTTCCACAACCATCGTGATACAGCCGAAATCTCCACCCAAAAAAGAGAATCCTTCAAAATCTGAACTGCTTGCGACGATCCCCTTGTCACTGTAAAGAGATTAAACCCTAAATTGTCGATTGTAGGCGGAAGAGAGTGCAAAAGCAATTCCGTCCAACTGCCGCCTTAGCATTGCATCTTCCGTTGTTTCGCTCCAACTAACCGACACGTAGCTATTTCCATGGGCCTCATTTTATTAGGCCCAAAAATAATGGGTCTGGTCCGCATTTTGATGTGCAATCGAGATCCAGCCCAGTAAAGATTTTAAGTTAGGATTTCGATTTTATAGTAAAGGAAAAAAAATTCAAAACAATTTATTTTTTGAGAATTACATGAGTTAATAAAAATAAATTTGTTAATTAGATTAACATAATTATCTGTTAATCTAATTAATGGGTCATTTCAATGTCAATGGAAAATTAACTGACATTGTTTCATTATAATTTATAAGTTTTTAACCTTCCCATCCAAAAACAGTAAGTTAGCTGAAAAATATTTTTAATCCCTAAATTTTTATTTTTTGAAAAAACAAAACTAATTTAGTTTTTAGACTTTGGTTTATAATGATTTAGGGTTGGTTTGGATTGACTTAAAGAAAAAAATATTTTTCAATAAACTTACTTTTGTTTAAATTCATTTTCGTGGAAATTGTTTAAAATATACTTAAGAAAATAATAACATTCAGACACTCTTATTTTCTAAATTAAATATCTTAAATACCTGAAAATCCAAACAGGCCATAGGTCGGTATATTTTTTTAGTTCCTGATTTCGTGTGTAATAACTTAATGACTTTATTTTAAAATCCGTAGCAATGAATTCTATGATATAAACAAAATTCACCAACATTCGATTTCACTTTTTTAACATTTGATGATGTACATGTTGTATTTTATAAAATTGTCGAAATTGATTTATTTAGGTAAAAAGATCTCGTTAATCTTTTACACTAAATTTTATAAAGAGATTAGTTTCCTTTACGTCCAAATGTTGTAGGGTCATGGATTGTCCAGTAAAGTTAGTCTAGGTACGTCCAATGTGACCCAGACAAAATTCGAAAGAGTAAGTTTGAAATCCTTTATAATCTATAAAATGATGGACGTACGAACCTCCCATCAAGAGAGACACAATCACGAACTTAAATGGATGCCTACATTGTGCACAGGTCGCACTTATAAAGGTAAATACATAATTTGGATTTCATAATATAGGGAAGCATTGTTAAAAATTAAAAGGATAAAACAAAGATTAAATTATTGCAAAATAGTAAAATTTAGAACAAAAACTATCTTTTTAGTTCCTAAGTTTTGATGAATACGTGTATGTTTAAAAATAAAACATTTTTAGTTTTTAGGTTTATAAGAATAGAGATGCGTACCTTTTTATTAAAATAACTTTATATTTTATTTTAAATAATCAACCGAACAACTTCCCAAAAATCATATCGTTCTTATAACTATTTTTAAAATCTTAGATATAATGTAATTATTTTTAAAAAATCAAACATATAATTAGAAACTTATAAATCTAACTTTTAAAAATTTATAGAATTCATTTCCAAACGAATCTTCGACCTAAAAAAGTTTAGATTCGAAGATAAAATAAAAGTTCACGGGTTAAATTGATAACAAAAATTTTGGTAAAAGAGAGTATAAAAGGGCAAAAAAAAGAGATTCCAAGATATTAATTTATATCACCGAATGAAGGGAAAGAAAAACCCTTTTGGCGGTGAAGATAATTAACGCAAAAAAGTTTGAATATAGAAAAGGAAAGTATAATAATAATAGTAACTGATAAATAAATAAAATTTAACCCTAGATTTTGTATAAAAGGACTTCCAATTCACAACTTGTAAATTTTCTCGTCAAGAACTCCTAGATCGCGAGTAGAGAATATTCTCGAGCATCGTTTTCTTTTCTTCTGGTTCAGAATAATTCCTTCAGCATCTCTTTTCATCTCAAGTTTTTGATTGATTTGTGCTGAACAACAACTATTTGGGGTTCTTGTGTAATTTAAGAGCGAGGAAGATCGGAAAGACAAACCCTCGTGTACTCGCTATGTCTTCTTCCGGAATCTCTTCCCAAAGCTCCCAATTGACAGATGCGGTTCAAGGACTAGTTCTTAGCGATCAGGTTTTATTATTTATCTATTCATTTTCGGAGTTGATGTACTTTTACGCGCTTTCTTTATTTAAGAGAATCTGAGGTGTGTGAGAAATGGTTGTTTTTCGATTTGTGTTGATAGTTCTTATTGGAAGTATTGGTGTTCTCAAATCTGAAATTGTTGATTTAGTCTTGGTGTCATTTGCTTTTCAAGATTTGCGTTTCTTGGGGGCTAATTAAATGAGTCAGAGATTGTTGGGTTAGTCTTGTTTTTTTCATCGTCTAGATTATGGACGTCGGGGATTGTTTTCTGCGTTTTGATGTCTAGAGGAAAATGGTTCAATCGAATTGAATATCATAATAATCTGTTCATGTTCACCCGTTTGTCAGTAATTGTTGTTTTTCTTTTGCGAATTTGGTCGGTCGCGTGTGAATAATTTTATTTATTCTTTAAAGAAGATTGATTTTTCCTCTATTTCAGTTCGAGTTGCATTACCATGATTTTGTCCAAGTGTCTGTTTTCTGACTTTCTGGATTTGTATGTTTAGTTGGAAATGTAGATCTTTCTTGTTCTGGTTCAGAATAATTCTTTAGTCTCTCCTTTTTTCTTTAGTTTTGATTTGTGCTGAACAACTGTTCGGGTTCTGTGTTTTTTAGAGCGATAAAGATCGGAGGGTTATGACAACTTCTTCCGGAATCTCTATCCAGAGCGCTGAAATTTCAGATGCCGTTCAAGAACAAGTAACTTGCCACCAGGTTTTTTCTATCTATTCATTTTCGATGTCGATCTACTTTCAAGCACTTTCCTTTTTCTAGAGAATCAGGGGCGTAAAACTGTGGTAGGAAATGATTGTCTACAATTTGTTTTGCTAGTTCTTATGGGAAATATAGTGAATCTGAAACCGTTAATCTAGTTAGTTTTGTTGCCATTTGTTTTTTCTAGATCTGTAACCGTTGGGTTGATCATGTTTCTTTCATTGTCAAGATTGTGGATATCAGGCCCTGCGATATAATATCTAGGGAGAATATGGTTTTGAATTGAATTTTAGATTGGTTGAATGGCTATGAGGAATCATAAAAAGCAGGAACTATTGCTTATGTTCATCTTGTTTTTCTCTTGCGTTGGTTTGTCACCTGTGTTTGTTTTTCTTTATTCTATCAGGAAGATTTCCTCTCTTTCAGTTAGAGCTGCATTTCTATGATTCTGTTTGATTGCTTGTTTTAGAATATTGAATATTCTCTGCATGCTTCAAGGATTTCTTATTTTGTGGATTTGTATGTTCAGTTGGAAATGGGAAAGAAAGTAGAGATTCAAGGAACGGGGCATGGTAGTCACGATGGGGCTTGTGCAATTTGCTTGAATAAGATAGCACTTCAAGAAACTGCTTTAGTAAGAGGCTGTGAGCACGCCTATTGGTTTGTTCCTATCGATTCATCTTTCGTCTACTTATAAATATTTTCTATAGCATGACTTATTCATTTCGTTGTCGCTCTATGCTTGTATTGGAGATGGAGTTTTAAGTTGTTGCGAACGTATTCCTGGGAGTCCGCTAAACTTTGTAGGAGAAAATTCACTGTATCCATATTGCCTTTGGTGCAATGTTTCTAATTGTACTTGAGGTTGCTCGGATTTAATTGGAAGAGGTATGCTGTTTTAGATTTATAACCAAAACATCTTGGAGTTAGGGAATTGTATGGTATGGAGTCATATCGATAATTTGTTGTTATTTGAAAGAAAGATATATCATAAACTATCCGAAGTCAGAGTTAAGTCTTGTCTTATATAGTTTATTGGTAGTTGAACTTAAAATGCTTGGTGGTATTTGGACCAAATTAGACTGACAACCGCCGGTTAATTATTATGACATATGATGGACACACTCTAAATATGACACATATCAAACACCGTGTTGAATATTTGATGGGATGGGTACAAAGTACAATAGACACAAAGCACATATTGGAACAATTATTAGGCATTTGGATATCTCCGAATTCGGCAGAGATGGCATGTCGCGTATGCTTCTTTTTTGGAAGCGAGTTACCCTTTCAGCTCTTCCAAATTATGAATTTTCGATGCATGTTATAGTTGTATGTTTTGGCTTTATTTTATTTTATTTAGTCTTTCATTTACTTTCTTGAAGTGCAACTTGCATCCTTCGATGGGCCTCATACACTCAAAAGCCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGGTTTGTCCATTCATTATTCTCGGGAGATCTTTTGTAGATTTAGTTTAGATTTGAACCATTGTTTTAAATTACCGTTCTTATTAAATATTGCCTTTGCATTGTTAGCATCCACGACTACATGTTTGAGGAGAGTGTATGCCTGCTTCTGAGAGCTTCGTGGTATAAACCTCTAATCTTTGAAGAACGGGAGGAAACGTATGATGAGCCTGAGGACGACCAATACTATCATTATGAGGATGATGATGAAGAGTTAGAGGATGCCTACCTGGGTGAATCACCATCTCTCCGCATCGGGAATCGAAGGTGGGGATACAATGGTTACGTGAGGGCAGGTAGACAGGAAGCCCGACCAGTTCTTAGGCAGGAGTTTACTGGAGGACCAAGTTCATCGAGGGATCCCGTAACAAAACAGGCCTCCAAAGACAAAACAGGTCGACGTGCTAAAAGGGCCTTGAAACGGGAAGCAGCAGATAAGGCTGCAGCCGCCAAGCATCAAGAACATCTGGCTAGGTTTGGCCGGAAGTGATTTTTATATTTAAAACTTCTGTACATAACTAAGCTCTTTTCTTTTCTATGTGTACAGCTCTTTGATTCAATCTTCTTTTCCTTAGCCAATGTGCCTTGCTAAAAGGCTGGTGGCTCCCAATGAAAAACTAAGATAGAGATCATACATGCTGACAAGGGCGGCGTACATGGCAGCGCCTGCAGAATTCTTTGTACAAAACTTTGGATCTCAAAATCATTCGTAAAAGAATTATTAGGAGTTAGCGCTGTAAGTTTCATGTATTGAAACTTTCCAGAACAAACTAGGCGATGAACATATTTGTTATTGTTGTAGCTACTTGTAGTACATCTAATAAAATTTGTCTTTTCAGGAG

mRNA sequence

GAATAGTATTCATTTATAAGAAGAAGAAGCTTCGTATAAAATAATATCAAATTTCAAGTCGATCGTAATTACATAAAATATTTTCTCTCTCCGATATCCGATCCCTCCTCTTCTCTCCTACTCTAACCCTACAGATCCCTTCCTTCTCCCCTCATTTCTCCGATTCTATAATAATCTTCTCTCCAGATCCACTCCTCATCCCGCCTGATCCTTATTTCCTTCGCAATCTGTAACGCTAAGTGTCGATCTCACCGGCGAGCGGCGAGGTTTAATTTACTTTCCAGAGCGATAAAGATCGGAGGGTTATGACAACTTCTTCCGGAATCTCTATCCAGAGCGCTGAAATTTCAGATGCCGTTCAAGAACAAGTAACTTGCCACCAGTTGGAAATGGGAAAGAAAGTAGAGATTCAAGGAACGGGGCATGGTAGTCACGATGGGGCTTGTGCAATTTGCTTGAATAAGATAGCACTTCAAGAAACTGCTTTAGTAAGAGGCTGTGAGCACGCCTATTGTGCAACTTGCATCCTTCGATGGGCCTCATACACTCAAAAGCCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGCATCCACGACTACATGTTTGAGGAGAGTGTATGCCTGCTTCTGAGAGCTTCGTGGTATAAACCTCTAATCTTTGAAGAACGGGAGGAAACGTATGATGAGCCTGAGGACGACCAATACTATCATTATGAGGATGATGATGAAGAGTTAGAGGATGCCTACCTGGGTGAATCACCATCTCTCCGCATCGGGAATCGAAGGTGGGGATACAATGGTTACGTGAGGGCAGGTAGACAGGAAGCCCGACCAGTTCTTAGGCAGGAGTTTACTGGAGGACCAAGTTCATCGAGGGATCCCGTAACAAAACAGGCCTCCAAAGACAAAACAGGTCGACGTGCTAAAAGGGCCTTGAAACGGGAAGCAGCAGATAAGGCTGCAGCCGCCAAGCATCAAGAACATCTGGCTAGGTTTGGCCGGAAGTGATTTTTATATTTAAAACTTCTGTACATAACTAAGCTCTTTTCTTTTCTATGTGTACAGCTCTTTGATTCAATCTTCTTTTCCTTAGCCAATGTGCCTTGCTAAAAGGCTGGTGGCTCCCAATGAAAAACTAAGATAGAGATCATACATGCTGACAAGGGCGGCGTACATGGCAGCGCCTGCAGAATTCTTTGTACAAAACTTTGGATCTCAAAATCATTCGTAAAAGAATTATTAGGAGTTAGCGCTGTAAGTTTCATGTATTGAAACTTTCCAGAACAAACTAGGCGATGAACATATTTGTTATTGTTGTAGCTACTTGTAGTACATCTAATAAAATTTGTCTTTTCAGGAG

Coding sequence (CDS)

ATGACAACTTCTTCCGGAATCTCTATCCAGAGCGCTGAAATTTCAGATGCCGTTCAAGAACAAGTAACTTGCCACCAGTTGGAAATGGGAAAGAAAGTAGAGATTCAAGGAACGGGGCATGGTAGTCACGATGGGGCTTGTGCAATTTGCTTGAATAAGATAGCACTTCAAGAAACTGCTTTAGTAAGAGGCTGTGAGCACGCCTATTGTGCAACTTGCATCCTTCGATGGGCCTCATACACTCAAAAGCCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGCATCCACGACTACATGTTTGAGGAGAGTGTATGCCTGCTTCTGAGAGCTTCGTGGTATAAACCTCTAATCTTTGAAGAACGGGAGGAAACGTATGATGAGCCTGAGGACGACCAATACTATCATTATGAGGATGATGATGAAGAGTTAGAGGATGCCTACCTGGGTGAATCACCATCTCTCCGCATCGGGAATCGAAGGTGGGGATACAATGGTTACGTGAGGGCAGGTAGACAGGAAGCCCGACCAGTTCTTAGGCAGGAGTTTACTGGAGGACCAAGTTCATCGAGGGATCCCGTAACAAAACAGGCCTCCAAAGACAAAACAGGTCGACGTGCTAAAAGGGCCTTGAAACGGGAAGCAGCAGATAAGGCTGCAGCCGCCAAGCATCAAGAACATCTGGCTAGGTTTGGCCGGAAGTGA

Protein sequence

MTTSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK*

Homology

[Close]

BLAST of MELO3C014562 vs. TrEMBL
Match: A0A0A0KK15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G431760 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 6.8e-132
Identity = 235/245 (95.92%), Postives = 238/245 (97.14%), Query Frame = 1


Query: 1   MTTSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA 60
           M TSSGISIQSAEISDAVQEQVTC QLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA
Sbjct: 33  MATSSGISIQSAEISDAVQEQVTCDQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA 92

Query: 61  LVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR 120
           LVRGCEHAYCATCILRWASYT+KPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR
Sbjct: 93  LVRGCEHAYCATCILRWASYTKKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR 152

Query: 121 ASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA 180
           ASWYKP I EEREETYD+PEDDQYY YEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA
Sbjct: 153 ASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA 212

Query: 181 GRQEARPVLRQEFTGGPSSSRDPVTKQA-SKDKTGRRAKRALKREAADKAAAAKHQEHLA 240
           GRQEARPVLRQEFT GPSSSR+PVTKQA SKDKTGRRAKRALKREAADKAAAAKHQEHLA
Sbjct: 213 GRQEARPVLRQEFT-GPSSSREPVTKQASSKDKTGRRAKRALKREAADKAAAAKHQEHLA 272

Query: 241 RFGRK 245
           RFGRK
Sbjct: 273 RFGRK 276

[Close]

BLAST of MELO3C014562 vs. TrEMBL
Match: A0A0A0KK15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G431760 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 6.8e-116
Identity = 217/276 (78.62%), Postives = 228/276 (82.61%), Query Frame = 1


Query: 3   TSSGISIQSAEISDAVQEQVTCHQLEMGKK-------VEIQG------------------ 62
           +SSGIS QS+E++DAVQ  V C Q +  ++       + IQ                   
Sbjct: 2   SSSGISSQSSELTDAVQGLVLCDQSDKDRRAMATSSGISIQSAEISDAVQEQVTCDQLEM 61

Query: 63  --------TGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQC 122
                   TGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYT+KPTCPQC
Sbjct: 62  GKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTKKPTCPQC 121

Query: 123 KHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYED 182
           KHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKP I EEREETYD+PEDDQYY YED
Sbjct: 122 KHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYED 181

Query: 183 DDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA- 242
           DDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT GPSSSR+PVTKQA 
Sbjct: 182 DDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT-GPSSSREPVTKQAS 241

Query: 243 SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 245
           SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 242 SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276

HSP 2 Score: 334.0 bits (855), Expect = 1.6e-88
Identity = 165/246 (67.07%), Postives = 190/246 (77.24%), Query Frame = 1


Query: 1   MTTSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA 60
           MT+   +  Q   +SD +      HQ EM    +      G+H G CAICL++I LQETA
Sbjct: 1   MTSVINMDGQDQILSDLINSSTQQHQGEMQSNTDNVEKRCGNHGGVCAICLDEIMLQETA 60

Query: 61  LVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR 120
           LV+GCEHAYCATCILRW +Y+QKPTCPQCKHPFEFL VHRSLDGSIHDYMFEESVCLLLR
Sbjct: 61  LVKGCEHAYCATCILRWVTYSQKPTCPQCKHPFEFLNVHRSLDGSIHDYMFEESVCLLLR 120

Query: 121 ASWYKPLIFEEREETYDEPEDDQYYHYED-DDEELEDAYLGESPSLRIGNRRWGYNGYVR 180
           A W++PLI EERE+ YD+P DD YY YED +D++L++AY   S S+RIGNRRWG NGYVR
Sbjct: 121 AKWFEPLIVEEREDVYDDP-DDYYYPYEDEEDDDLDEAYFSSSSSIRIGNRRWGDNGYVR 180

Query: 181 AGRQEARPVLRQEF-TGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHL 240
            GRQEARPV R      G SSSR+P  K+A+ DKTGRRAKRALKREAADKAAAAKHQ+HL
Sbjct: 181 GGRQEARPVNRSNIEDSGASSSREPRKKEAAMDKTGRRAKRALKREAADKAAAAKHQQHL 240

Query: 241 ARFGRK 245
           AR GRK
Sbjct: 241 ARLGRK 245

[Close]

BLAST of MELO3C014562 vs. TrEMBL
Match: A0A061GU17_THECC (RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_040934 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.2e-83
Identity = 159/242 (65.70%), Postives = 186/242 (76.86%), Query Frame = 1


Query: 4   SSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVR 63
           +S I I + +I +A+       Q EM  K  +   G  +H G CAICL+KI LQETALV+
Sbjct: 2   TSVIKIDAEQIVNALPNLSLQDQKEMKNKGAVGEEGCENHSGICAICLDKIVLQETALVK 61

Query: 64  GCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASW 123
           GCEHAYC TCILRWA+Y++ PTCPQCKHPFEFL VHRSLDG I+DYMFEESVCLLLRA+W
Sbjct: 62  GCEHAYCVTCILRWATYSKMPTCPQCKHPFEFLNVHRSLDGRINDYMFEESVCLLLRAAW 121

Query: 124 YKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQ 183
           ++PLI E+REE YD+ ED  YY YE+DD++ ++AY   SPSLRIGNRRWG NGYVR+GRQ
Sbjct: 122 FEPLIVEDREELYDDLED--YYPYEEDDDQ-DEAYYASSPSLRIGNRRWGDNGYVRSGRQ 181

Query: 184 EARPVLRQEF-TGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG 243
           EARPV R  F   G  SSR+P  K+ +K   GRRAKRALKREAADKAAAAKHQEHL R G
Sbjct: 182 EARPVQRSNFQDSGAGSSREPKKKEVAKSTMGRRAKRALKREAADKAAAAKHQEHLMRLG 240

Query: 244 RK 245
           RK
Sbjct: 242 RK 240

[Close]

BLAST of MELO3C014562 vs. TrEMBL
Match: A0A061GZE8_THECC (RING/U-box superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_040934 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 7.6e-83
Identity = 158/242 (65.29%), Postives = 187/242 (77.27%), Query Frame = 1


Query: 4   SSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVR 63
           +S I I + +I +A+   ++    EM  K  +   G  +H G CAICL+KI LQETALV+
Sbjct: 2   TSVIKIDAEQIVNALPN-LSLQDQEMKNKGAVGEEGCENHSGICAICLDKIVLQETALVK 61

Query: 64  GCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASW 123
           GCEHAYC TCILRWA+Y++ PTCPQCKHPFEFL VHRSLDG I+DYMFEESVCLLLRA+W
Sbjct: 62  GCEHAYCVTCILRWATYSKMPTCPQCKHPFEFLNVHRSLDGRINDYMFEESVCLLLRAAW 121

Query: 124 YKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQ 183
           ++PLI E+REE YD+ ED  YY YE+DD++ ++AY   SPSLRIGNRRWG NGYVR+GRQ
Sbjct: 122 FEPLIVEDREELYDDLED--YYPYEEDDDQ-DEAYYASSPSLRIGNRRWGDNGYVRSGRQ 181

Query: 184 EARPVLRQEF-TGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG 243
           EARPV R  F   G  SSR+P  K+ +K   GRRAKRALKREAADKAAAAKHQEHL R G
Sbjct: 182 EARPVQRSNFQDSGAGSSREPKKKEVAKSTMGRRAKRALKREAADKAAAAKHQEHLMRLG 239

Query: 244 RK 245
           RK
Sbjct: 242 RK 239

[Close]

BLAST of MELO3C014562 vs. TrEMBL
Match: B9GG85_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s28270g PE=4 SV=2)

HSP 1 Score: 314.7 bits (805), Expect = 1.0e-82
Identity = 152/224 (67.86%), Postives = 178/224 (79.46%), Query Frame = 1


Query: 26  QLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPT 85
           Q EM  KVE      G+H G CAICL+KI LQETALV+GCEHAYC TCILRW++YT+ PT
Sbjct: 19  QGEMESKVESSERACGNHGGICAICLDKIVLQETALVKGCEHAYCVTCILRWSTYTKNPT 78

Query: 86  CPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYY 145
           CPQCKHPFEFL +HRSLDGSI DYMFEESVCLLLRASW+  L  E+ E+ Y++PED  YY
Sbjct: 79  CPQCKHPFEFLNIHRSLDGSIQDYMFEESVCLLLRASWFMTLTVEDHEDVYEDPED--YY 138

Query: 146 HY----EDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEF-TGGPSSS 205
            Y    EDDD++L++ YL  S +LRIGNRRWG NGYVRAG QEARPV + +F   G  +S
Sbjct: 139 PYEFEDEDDDDDLDEVYLSSSSNLRIGNRRWGDNGYVRAGHQEARPVYQADFKDSGACTS 198

Query: 206 RDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 245
           R+P  K+A+KD+TGRRAKR LKREAADKAAA+KHQ+HLAR GRK
Sbjct: 199 REPKKKEAAKDRTGRRAKRTLKREAADKAAASKHQQHLARLGRK 240

[Close]

BLAST of MELO3C014562 vs. TAIR10
Match: AT5G19430.1 (AT5G19430.1 RING/U-box superfamily protein)

HSP 1 Score: 265.8 bits (678), Expect = 2.7e-71
Identity = 138/249 (55.42%), Postives = 172/249 (69.08%), Query Frame = 1


Query: 9   IQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHA 68
           +   ++ D +Q+    +Q +   + EI     G+H G CAICL++I LQETA+V+GCEH 
Sbjct: 8   VSEQQVIDGIQDLALQNQDKKKIQEEIHEPSFGNHGGCCAICLSEIPLQETAMVKGCEHT 67

Query: 69  YCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPL- 128
           YC TCILRWAS  + PTCPQCKHPF+FL VHR+LDGSI D++FEESVCLLLRASW+ PL 
Sbjct: 68  YCVTCILRWASCKESPTCPQCKHPFDFLSVHRALDGSIEDFLFEESVCLLLRASWFVPLD 127

Query: 129 IFEEREETYDEPED-DQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEAR 188
           + E+   ++   +D D  Y YED+D++L++ YL  S SLRIGNRRWG NG+VR+GRQEAR
Sbjct: 128 VVEQASYSHGYHDDFDIPYDYEDEDDDLDEFYLHGS-SLRIGNRRWGGNGFVRSGRQEAR 187

Query: 189 PVLRQEFTGGPSSSRDPVTKQASKDK-------TGRRAKRALKREAADKA----AAAKHQ 245
           PV R   +G  SSS    +    KDK       TGRRAKRA+KREAA+KA    AAAKH+
Sbjct: 188 PVQRYSGSGSSSSSSSGSSSSEPKDKQVKTTNTTGRRAKRAMKREAANKAAEVTAAAKHE 247

[Close]

BLAST of MELO3C014562 vs. TAIR10
Match: AT5G12310.1 (AT5G12310.1 RING/U-box superfamily protein)

HSP 1 Score: 250.8 bits (639), Expect = 8.9e-67
Identity = 128/220 (58.18%), Postives = 158/220 (71.82%), Query Frame = 1


Query: 41  GSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHR 100
           G+H G CAICL+ I LQETA+V+GCEHAYC TCILRWASY +KPTCPQCK PF+FL VHR
Sbjct: 37  GNHGGCCAICLDTIPLQETAMVKGCEHAYCVTCILRWASYKEKPTCPQCKLPFDFLNVHR 96

Query: 101 SLDGSIHDYMFEESVCLLLRASWYKPLIFEEREE-----TYDEPEDDQYYHYEDDDEELE 160
           +LDGS+ D+MFEESVCLLLRASW++PL   ER        YD     +Y   ++DD++L+
Sbjct: 97  ALDGSVEDFMFEESVCLLLRASWFQPLEAVERVSDNDNFNYDFDIPPEYEEEDEDDDDLD 156

Query: 161 DAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQASKDK--- 220
           + Y+ +  SLR+GNRRWG NG+VRAGRQEARPV + +  GG +S  +P +  + + K   
Sbjct: 157 EFYM-QGSSLRLGNRRWGDNGFVRAGRQEARPV-QHKNRGGQASGSEPASSSSCEPKEKT 216

Query: 221 ----TGRRAKRALKREAADKA----AAAKHQEHLARFGRK 245
               TGRRAKRA+KREAA+KA    AAAKH+  L R GRK
Sbjct: 217 SSAITGRRAKRAMKREAANKAAEAVAAAKHEALLVRLGRK 254

[Close]

BLAST of MELO3C014562 vs. NCBI nr
Match: gi|659097507|ref|XP_008449664.1| (PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo])

HSP 1 Score: 508.1 bits (1307), Expect = 8.8e-141
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1


Query: 1   MTTSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA 60
           MTTSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA
Sbjct: 1   MTTSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA 60

Query: 61  LVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR 120
           LVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR
Sbjct: 61  LVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR 120

Query: 121 ASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA 180
           ASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA
Sbjct: 121 ASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA 180

Query: 181 GRQEARPVLRQEFTGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLAR 240
           GRQEARPVLRQEFTGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLAR
Sbjct: 181 GRQEARPVLRQEFTGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLAR 240

Query: 241 FGRK 245
           FGRK
Sbjct: 241 FGRK 244

[Close]

BLAST of MELO3C014562 vs. NCBI nr
Match: gi|659097505|ref|XP_008449663.1| (PREDICTED: uncharacterized protein LOC103491476 isoform X1 [Cucumis melo])

HSP 1 Score: 508.1 bits (1307), Expect = 8.8e-141
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1


Query: 1   MTTSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA 60
           MTTSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA
Sbjct: 33  MTTSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA 92

Query: 61  LVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR 120
           LVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR
Sbjct: 93  LVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR 152

Query: 121 ASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA 180
           ASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA
Sbjct: 153 ASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA 212

Query: 181 GRQEARPVLRQEFTGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLAR 240
           GRQEARPVLRQEFTGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLAR
Sbjct: 213 GRQEARPVLRQEFTGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLAR 272

Query: 241 FGRK 245
           FGRK
Sbjct: 273 FGRK 276

[Close]

BLAST of MELO3C014562 vs. NCBI nr
Match: gi|659097505|ref|XP_008449663.1| (PREDICTED: uncharacterized protein LOC103491476 isoform X1 [Cucumis melo])

HSP 1 Score: 438.7 bits (1127), Expect = 6.6e-120
Identity = 222/275 (80.73%), Postives = 229/275 (83.27%), Query Frame = 1


Query: 3   TSSGISIQSAEISDAVQEQVTCHQ------------------LEMGKKVEIQGTGH---- 62
           +SSGIS QS++++DAVQ  V   Q                   E+   V+ Q T H    
Sbjct: 2   SSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLEM 61

Query: 63  -----------GSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQC 122
                      GSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQC
Sbjct: 62  GKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQC 121

Query: 123 KHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYED 182
           KHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYED
Sbjct: 122 KHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYED 181

Query: 183 DDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQAS 242
           DDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQAS
Sbjct: 182 DDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQAS 241

Query: 243 KDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 245
           KDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 242 KDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276

HSP 2 Score: 478.0 bits (1229), Expect = 9.8e-132
Identity = 235/245 (95.92%), Postives = 238/245 (97.14%), Query Frame = 1


Query: 1   MTTSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA 60
           M TSSGISIQSAEISDAVQEQVTC QLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA
Sbjct: 1   MATSSGISIQSAEISDAVQEQVTCDQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA 60

Query: 61  LVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR 120
           LVRGCEHAYCATCILRWASYT+KPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR
Sbjct: 61  LVRGCEHAYCATCILRWASYTKKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR 120

Query: 121 ASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA 180
           ASWYKP I EEREETYD+PEDDQYY YEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA
Sbjct: 121 ASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA 180

Query: 181 GRQEARPVLRQEFTGGPSSSRDPVTKQA-SKDKTGRRAKRALKREAADKAAAAKHQEHLA 240
           GRQEARPVLRQEFT GPSSSR+PVTKQA SKDKTGRRAKRALKREAADKAAAAKHQEHLA
Sbjct: 181 GRQEARPVLRQEFT-GPSSSREPVTKQASSKDKTGRRAKRALKREAADKAAAAKHQEHLA 240

Query: 241 RFGRK 245
           RFGRK
Sbjct: 241 RFGRK 244

[Close]

BLAST of MELO3C014562 vs. NCBI nr
Match: gi|449444871|ref|XP_004140197.1| (PREDICTED: uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus])

HSP 1 Score: 478.0 bits (1229), Expect = 9.8e-132
Identity = 235/245 (95.92%), Postives = 238/245 (97.14%), Query Frame = 1


Query: 1   MTTSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA 60
           M TSSGISIQSAEISDAVQEQVTC QLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA
Sbjct: 33  MATSSGISIQSAEISDAVQEQVTCDQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA 92

Query: 61  LVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR 120
           LVRGCEHAYCATCILRWASYT+KPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR
Sbjct: 93  LVRGCEHAYCATCILRWASYTKKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR 152

Query: 121 ASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA 180
           ASWYKP I EEREETYD+PEDDQYY YEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA
Sbjct: 153 ASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA 212

Query: 181 GRQEARPVLRQEFTGGPSSSRDPVTKQA-SKDKTGRRAKRALKREAADKAAAAKHQEHLA 240
           GRQEARPVLRQEFT GPSSSR+PVTKQA SKDKTGRRAKRALKREAADKAAAAKHQEHLA
Sbjct: 213 GRQEARPVLRQEFT-GPSSSREPVTKQASSKDKTGRRAKRALKREAADKAAAAKHQEHLA 272

Query: 241 RFGRK 245
           RFGRK
Sbjct: 273 RFGRK 276

[Close]

BLAST of MELO3C014562 vs. NCBI nr
Match: gi|449444871|ref|XP_004140197.1| (PREDICTED: uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus])

HSP 1 Score: 424.9 bits (1091), Expect = 9.8e-116
Identity = 217/276 (78.62%), Postives = 228/276 (82.61%), Query Frame = 1


Query: 3   TSSGISIQSAEISDAVQEQVTCHQLEMGKK-------VEIQG------------------ 62
           +SSGIS QS+E++DAVQ  V C Q +  ++       + IQ                   
Sbjct: 2   SSSGISSQSSELTDAVQGLVLCDQSDKDRRAMATSSGISIQSAEISDAVQEQVTCDQLEM 61

Query: 63  --------TGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQC 122
                   TGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYT+KPTCPQC
Sbjct: 62  GKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTKKPTCPQC 121

Query: 123 KHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYED 182
           KHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKP I EEREETYD+PEDDQYY YED
Sbjct: 122 KHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYED 181

Query: 183 DDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA- 242
           DDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT GPSSSR+PVTKQA 
Sbjct: 182 DDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT-GPSSSREPVTKQAS 241

Query: 243 SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 245
           SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 242 SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276

HSP 2 Score: 334.0 bits (855), Expect = 2.3e-88
Identity = 165/246 (67.07%), Postives = 190/246 (77.24%), Query Frame = 1


Query: 1   MTTSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA 60
           MT+   +  Q   +SD +      HQ EM    +      G+H G CAICL++I LQETA
Sbjct: 1   MTSVINMDGQDQILSDLINSSTQQHQGEMQSNTDNVEKRCGNHGGVCAICLDEIMLQETA 60

Query: 61  LVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR 120
           LV+GCEHAYCATCILRW +Y+QKPTCPQCKHPFEFL VHRSLDGSIHDYMFEESVCLLLR
Sbjct: 61  LVKGCEHAYCATCILRWVTYSQKPTCPQCKHPFEFLNVHRSLDGSIHDYMFEESVCLLLR 120

Query: 121 ASWYKPLIFEEREETYDEPEDDQYYHYED-DDEELEDAYLGESPSLRIGNRRWGYNGYVR 180
           A W++PLI EERE+ YD+P DD YY YED +D++L++AY   S S+RIGNRRWG NGYVR
Sbjct: 121 AKWFEPLIVEEREDVYDDP-DDYYYPYEDEEDDDLDEAYFSSSSSIRIGNRRWGDNGYVR 180

Query: 181 AGRQEARPVLRQEF-TGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHL 240
            GRQEARPV R      G SSSR+P  K+A+ DKTGRRAKRALKREAADKAAAAKHQ+HL
Sbjct: 181 GGRQEARPVNRSNIEDSGASSSREPRKKEAAMDKTGRRAKRALKREAADKAAAAKHQQHL 240

Query: 241 ARFGRK 245
           AR GRK
Sbjct: 241 ARLGRK 245

The following BLAST results are available for this feature:

BLAST of MELO3C014562 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK15_CUCSA	6.8e-132	95.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G431760 PE=4 SV=1	[more]
A0A0A0KK15_CUCSA	6.8e-116	78.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G431760 PE=4 SV=1	[more]
A0A061GU17_THECC	1.2e-83	65.70	RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_040934 PE=4 S...	[more]
A0A061GZE8_THECC	7.6e-83	65.29	RING/U-box superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_040934 PE=4 S...	[more]
B9GG85_POPTR	1.0e-82	67.86	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s28270g PE=4 SV=2	[more]

BLAST of MELO3C014562 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G19430.1	2.7e-71	55.42	RING/U-box superfamily protein	[more]
AT5G12310.1	8.9e-67	58.18	RING/U-box superfamily protein	[more]

BLAST of MELO3C014562 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097507\|ref\|XP_008449664.1\|	8.8e-141	100.00	PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo]	[more]
gi\|659097505\|ref\|XP_008449663.1\|	8.8e-141	100.00	PREDICTED: uncharacterized protein LOC103491476 isoform X1 [Cucumis melo]	[more]
gi\|659097505\|ref\|XP_008449663.1\|	6.6e-120	80.73	PREDICTED: uncharacterized protein LOC103491476 isoform X1 [Cucumis melo]	[more]
gi\|449444871\|ref\|XP_004140197.1\|	9.8e-132	95.92	PREDICTED: uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus]	[more]
gi\|449444871\|ref\|XP_004140197.1\|	9.8e-116	78.62	PREDICTED: uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR017907	Znf_RING_CS
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR017907	Znf_RING_CS
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR017907	Znf_RING_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding
GO:0005515	protein binding
GO:0008270	zinc ion binding
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU44320	melon EST collection version 4.0	transcribed_cluster
MU60049	melon EST collection version 4.0	transcribed_cluster
MU65325	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014562T3	MELO3C014562T3	mRNA
MELO3C014562T1	MELO3C014562T1	mRNA
MELO3C014562T2	MELO3C014562T2	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU60049	MU60049	transcribed_cluster
MU44320	MU44320	transcribed_cluster
MU65325	MU65325	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 78..122 score: 1.
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 79..121 score: 9.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 79..122 score: 1
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 77..148 score: 1.0
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 97..106 scor
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 72..129 score: 4.65

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C014562	Csa6G431760	Cucumber (Chinese Long) v2	cumeB491
MELO3C014562	Cla008576	Watermelon (97103) v1	mewmB419
MELO3C014562	ClCG02G022880	Watermelon (Charleston Gray)	mewcgB376
MELO3C014562	Cla97C02G048950	Watermelon (97103) v2	mewmbB377
MELO3C014562	Bhi10G000198	Wax gourd	mewgoB484
MELO3C014562	CSPI06G23870	Wild cucumber (PI 183967)	cpimeB493
MELO3C014562	Cucsa.087010	Cucumber (Gy14) v1	cgymeB098
MELO3C014562	CmaCh20G001100	Cucurbita maxima (Rimu)	cmameB521
MELO3C014562	CmaCh02G012750	Cucurbita maxima (Rimu)	cmameB572
MELO3C014562	CmoCh02G013160	Cucurbita moschata (Rifu)	cmomeB561
MELO3C014562	CmoCh20G001190	Cucurbita moschata (Rifu)	cmomeB509
MELO3C014562	Lsi10G010890	Bottle gourd (USVL1VR-Ls)	lsimeB072
MELO3C014562	Cp4.1LG16g08580	Cucurbita pepo (Zucchini)	cpemeB278
MELO3C014562	Cp4.1LG05g04790	Cucurbita pepo (Zucchini)	cpemeB696
MELO3C014562	CsGy6G023220	Cucumber (Gy14) v2	cgybmeB432
MELO3C014562	Carg02689	Silver-seed gourd	carmeB0910
MELO3C014562	Carg06878	Silver-seed gourd	carmeB0528
MELO3C014562	CsaV3_6G039010	Cucumber (Chinese Long) v3	cucmeB503

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None