CmaCh02G012750 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh02G012750
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRING finger-like protein
LocationCma_Chr02 : 7483171 .. 7486332 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGATCGCCGTTAGAGAATATTCTCGAGCATCTTTTTTTTCTTCTCTTTTGCTTCAGAATAATTCTTCAGCATCTCCTTTCATTTCAAGTTTCGATTTCTGCTGAATAACTGTTGTTCTGGGTTCTGTGTGATCTAATTTATAAAGCGAGAAGAATCGGAGGTGAAACCCTCGTGTTCTCGCCATGGCTTCTTCGGGAATCTCTACTGAAAGCGCCGAATTGTCTGATGCGGTTCAAATACTGGAAGTTTGCAACCAGGTTTTAATCTATCTTTTCACTTCCGAAGTTGTTACACTTCTTGCGTAAAACTTGGCGCGAGAAATGGTTGTTTTTGTGTTGAGAGTTCGAATTGGAAGTATCGTTGATCTAATCTTGTTTTCTAGATTTGCGCTGGTCAAGGGTTAATTGAAGTGTTATCGTCGGTTTAGTCTTATTTTATTTCATTTTCAAGATTTTCGTGGCGTCGATAAGCGTATTTCTGCTTTTTAATATCAAGGAAGTACGTGTTCTAAATGAAAGGATTTGATGTGCGTGTTTTCTTTTTTTTACTCTGAGGACCCGTAGGAAGCGGGAGCTATTGTTAACATTCATTGATTTCCGTTATCCGATTGCCTGCTAATAGATCACTGTTGTTTTGAAATTGTGAATTTGGTCACCTGCGCATGCTATTTTATTTTCCAATGAAAGTTCTTAACTCCTGCCCTTGGCGTTGCATATTGTTGAAGTGTCTGTTTTCAAACATTAGTCATTTGCATAAATGTATTTTGAGGATTGCTAAGTTGCTGAACTTCTCTGTTCAGATTGAAATGGGAAAGAAGGTAGAGATTCACGGAACGGGGCATGGGAGTCATGATGGGGTTTGTGCAATTTGCTTAAATAAGATAGCTCTCCAAGAAACTGCCTTAGTGAGGGGTTGCGAGCATGCCTATTGGTTTGTTCTGATTGATTAATCTTTCATCTATGTATTAATAGTTTTTATAGCACGACTTTCATCTGCTTTACATTAGGTAATTTGTTGATCCGTTCCTTTTCTGTATTTTGTATGGGAATCTTTTTTGCAGTCATATGTTGACGTTCTATAGATGGTGCAATTCTTATGCTGCATTTATCATATATATTTCATTTCATTGTGGTTCTATGCTTGAATTGGAGTTGGAGTTTTAAGATCTTGCGAACATATTCCTGGGACTCCGCTAAACTTTATAGGAGAAAATTCATTGTATCCATATTGCTATTGGTACAATGTTTCTAATTGTGCTTCAGGTTGCTGGGATTTAATGGAAGAGGTATGCTATTTTAGATTTATAGCCCAAGTATCTTGGAGTCGGAGAAAATGTATGGTTCAGAGTCTGATGGTTAATCTGTTAATTCTCGTCTTATTTAGTTTGTTAATAATTAATTATTGATTATTGAAGTTAGAATGCTTGCTTGGTGAGACTGGGATAGAAACCTGTTGTACTCGGTACTCAGTGACTTATTGTGAGCCTGTGAATCTTATAGATGTCGGCTTTGGTAACGTGTTTGTATTCTACATAGGTTGGCTACTTGTTAAATCGGACACATATCAAATACTGTGTTGAACATTTATGGAGTGCAATAGACATGAATCAGACGCATCTCGAACAATTATTAGGCATTTGAACTAAGTATTGAAACATATGTTGAACAAGGCTGGGATGTTTAGAAAATGTCAATGTCCGTGCTAGCGTCTATGCTTCTTTGTTATTAGCCGATTACTCTTTCATCACCTCCAATTTGTCATCACATACTCGAAGCTTTTGGTGTCGGTTGCAAAGTTTAATTTTATGTTTTATTACTTGGTGTGGGAACATTTCCTCTATGACTATTGCAGAGAACACTTTATTTAGTTTTCACTTTCAGCTTAGGATCTTATCAGTAATAATTAAACCAAACAAAAAATGAAGTGGCAAATGGTCAAGTGAATTGTCTATTGTTTTCCAACCACTGAAGTATTACAAATATTTTCCTTGCTTTTTTTGAGGAATAGTGTGATCTTTTACAGTTTATACATATGGGCATTATATTCTTTTATTAATGCATTGTTTTACTTTCATGAAGTGCGACTTGCATCCTTCGATGGGCCTCATATAATAAGAATCCGACGTGTCCACAATGTAAACATCCATTTGAGTTCCTGATTGTGCATCGTTCTCTTGATGGGAGGTATGCCTCTTCATCATTCTATGGACCTTTTATAGTTTAGAGTCGCAGTATCATTTTAAATTAATGTTCTTACTTTTCTATCCATTTACTGTCTGCGTATTGTAGCGTCCATGACTTTATGTTTGAGGAGAGCGTATGCTTGCTTCTGAGAGCTTCATGGTATGTACCTCTGATCGTTGAAGATCGGGAAGAAACCTATGAAGATCCTGATGAGTACTACCCTTATGAGGATGACGACGAAGAGTTTGAGGAAGCTTACCTGGGTGCATCGTCGAGTCTCCGCATCGGCAATCGAAGGTGGGGAGACAATGGATATGTGAGGGGAGGTCGACAAGAAGCACGACCAGTTATTAGGTCAACTGTTCCAGTGCATGCAGGAGCTAGTTCATCACGTGAGCCTATAAAAAAAGATGCTTCCAAAGATAAAACAGGTCGACGAGCTAAAAGGGCCTTGAAACGGGAAGCTGCTGATAAAGCTGCAGCAGCTAAACATCAGGAACATCTAGCTAGGTTTGGGCGAAAGTGATTCAAGTTCCTGTATATAACAAGCCTTGCGCTTAGACCCTGTGTACAGTTCCAAGATTCAATTTACTTTCACAGTTGAAGTACCTTACCTCCCCTGAGCCTGGTGGCTCCCAATTAAATCTATGGTGGGGACTATACTTCAAGGTATAAAGGACATCCCAATGAGTTCTTTGTATGAACATCGAATCTCAAAATCAATCATAGAACAGTTGTTATGGTCGGATTTTCTGTTCTTTTTTAGATGAAGTAGTCAACCACTTTCATATGTGTGCAAGTTTTACGTGAAGGACACCAAAAGCCTTTGAGTTGTAGCTCAAGTAGGTGAAATCTAAGGCATTGGACCTCGGTGAATTGTAGCTCAAAGGATATCAACAGCCAACTTTAGACTCAAACTTGAAGTCCAAGCACATTAGTGTACATGTGATGTGGTTGGGAAGTAAATCAACTTTTCCT

mRNA sequence

TGGATCGCCGTTAGAGAATATTCTCGAGCATCTTTTTTTTCTTCTCTTTTGCTTCAGAATAATTCTTCAGCATCTCCTTTCATTTCAAGTTTCGATTTCTGCTGAATAACTGTTGTTCTGGGTTCTGTGTGATCTAATTTATAAAGCGAGAAGAATCGGAGGTGAAACCCTCGTGTTCTCGCCATGGCTTCTTCGGGAATCTCTACTGAAAGCGCCGAATTGTCTGATGCGGTTCAAATACTGGAAGTTTGCAACCAGATTGAAATGGGAAAGAAGGTAGAGATTCACGGAACGGGGCATGGGAGTCATGATGGGGTTTGTGCAATTTGCTTAAATAAGATAGCTCTCCAAGAAACTGCCTTAGTGAGGGGTTGCGAGCATGCCTATTGTGCGACTTGCATCCTTCGATGGGCCTCATATAATAAGAATCCGACGTGTCCACAATGTAAACATCCATTTGAGTTCCTGATTGTGCATCGTTCTCTTGATGGGAGCGTCCATGACTTTATGTTTGAGGAGAGCGTATGCTTGCTTCTGAGAGCTTCATGGTATGTACCTCTGATCGTTGAAGATCGGGAAGAAACCTATGAAGATCCTGATGAGTACTACCCTTATGAGGATGACGACGAAGAGTTTGAGGAAGCTTACCTGGGTGCATCGTCGAGTCTCCGCATCGGCAATCGAAGGTGGGGAGACAATGGATATGTGAGGGGAGGTCGACAAGAAGCACGACCAGTTATTAGGTCAACTGTTCCAGTGCATGCAGGAGCTAGTTCATCACGTGAGCCTATAAAAAAAGATGCTTCCAAAGATAAAACAGGTCGACGAGCTAAAAGGGCCTTGAAACGGGAAGCTGCTGATAAAGCTGCAGCAGCTAAACATCAGGAACATCTAGCTAGGTTTGGGCGAAAGTGATTCAAGTTCCTGTATATAACAAGCCTTGCGCTTAGACCCTGTGTACAGTTCCAAGATTCAATTTACTTTCACAGTTGAAGTACCTTACCTCCCCTGAGCCTGGTGGCTCCCAATTAAATCTATGGTGGGGACTATACTTCAAGGTATAAAGGACATCCCAATGAGTTCTTTGTATGAACATCGAATCTCAAAATCAATCATAGAACAGTTGTTATGGTCGGATTTTCTGTTCTTTTTTAGATGAAGTAGTCAACCACTTTCATATGTGTGCAAGTTTTACGTGAAGGACACCAAAAGCCTTTGAGTTGTAGCTCAAGTAGGTGAAATCTAAGGCATTGGACCTCGGTGAATTGTAGCTCAAAGGATATCAACAGCCAACTTTAGACTCAAACTTGAAGTCCAAGCACATTAGTGTACATGTGATGTGGTTGGGAAGTAAATCAACTTTTCCT

Coding sequence (CDS)

ATGGCTTCTTCGGGAATCTCTACTGAAAGCGCCGAATTGTCTGATGCGGTTCAAATACTGGAAGTTTGCAACCAGATTGAAATGGGAAAGAAGGTAGAGATTCACGGAACGGGGCATGGGAGTCATGATGGGGTTTGTGCAATTTGCTTAAATAAGATAGCTCTCCAAGAAACTGCCTTAGTGAGGGGTTGCGAGCATGCCTATTGTGCGACTTGCATCCTTCGATGGGCCTCATATAATAAGAATCCGACGTGTCCACAATGTAAACATCCATTTGAGTTCCTGATTGTGCATCGTTCTCTTGATGGGAGCGTCCATGACTTTATGTTTGAGGAGAGCGTATGCTTGCTTCTGAGAGCTTCATGGTATGTACCTCTGATCGTTGAAGATCGGGAAGAAACCTATGAAGATCCTGATGAGTACTACCCTTATGAGGATGACGACGAAGAGTTTGAGGAAGCTTACCTGGGTGCATCGTCGAGTCTCCGCATCGGCAATCGAAGGTGGGGAGACAATGGATATGTGAGGGGAGGTCGACAAGAAGCACGACCAGTTATTAGGTCAACTGTTCCAGTGCATGCAGGAGCTAGTTCATCACGTGAGCCTATAAAAAAAGATGCTTCCAAAGATAAAACAGGTCGACGAGCTAAAAGGGCCTTGAAACGGGAAGCTGCTGATAAAGCTGCAGCAGCTAAACATCAGGAACATCTAGCTAGGTTTGGGCGAAAGTGA

Protein sequence

MASSGISTESAELSDAVQILEVCNQIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETALVRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASWYVPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQEARPVIRSTVPVHAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Homology
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BLAST of CmaCh02G012750 vs. TrEMBL
Match: A0A0A0KK15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G431760 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 5.2e-108
Identity = 202/244 (82.79%), Postives = 215/244 (88.11%), Query Frame = 1 

Query: 3   SSGISTESAELSDAVQILEVCNQIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETALVR 62
           SSGIS +SAE+SDAVQ    C+Q+EMGKKVEI GTGHGSHDG CAICLNKIALQETALVR
Sbjct: 36  SSGISIQSAEISDAVQEQVTCDQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVR 95

Query: 63  GCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASW 122
           GCEHAYCATCILRWASY K PTCPQCKHPFEFLIVHRSLDGS+HD+MFEESVCLLLRASW
Sbjct: 96  GCEHAYCATCILRWASYTKKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASW 155

Query: 123 YVPLIVEDREETYEDP--DEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 182
           Y P I+E+REETY+DP  D+YYPYEDDDEE E+AYLG S SLRIGNRRWG NGYVR GRQ
Sbjct: 156 YKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQ 215

Query: 183 EARPVIRSTVPVHAGASSSREPIKKDA-SKDKTGRRAKRALKREAADKAAAAKHQEHLAR 242
           EARPV+R       G SSSREP+ K A SKDKTGRRAKRALKREAADKAAAAKHQEHLAR
Sbjct: 216 EARPVLRQE---FTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKAAAAKHQEHLAR 275

Query: 243 FGRK 244
           FGRK
Sbjct: 276 FGRK 276

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BLAST of CmaCh02G012750 vs. TrEMBL
Match: M5X7I0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010547mg PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 5.1e-87
Identity = 166/233 (71.24%), Postives = 194/233 (83.26%), Query Frame = 1 

Query: 13  LSDAVQILEVCNQIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETALVRGCEHAYCATC 72
           LSD +      +Q EM    +      G+H GVCAICL++I LQETALV+GCEHAYCATC
Sbjct: 14  LSDLINSSTQQHQGEMQSNTDNVEKRCGNHGGVCAICLDEIMLQETALVKGCEHAYCATC 73

Query: 73  ILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASWYVPLIVEDRE 132
           ILRW +Y++ PTCPQCKHPFEFL VHRSLDGS+HD+MFEESVCLLLRA W+ PLIVE+RE
Sbjct: 74  ILRWVTYSQKPTCPQCKHPFEFLNVHRSLDGSIHDYMFEESVCLLLRAKWFEPLIVEERE 133

Query: 133 ETYEDPDE-YYPYED-DDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQEARPVIRSTV 192
           + Y+DPD+ YYPYED +D++ +EAY  +SSS+RIGNRRWGDNGYVRGGRQEARPV RS +
Sbjct: 134 DVYDDPDDYYYPYEDEEDDDLDEAYFSSSSSIRIGNRRWGDNGYVRGGRQEARPVNRSNI 193

Query: 193 PVHAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 244
              +GASSSREP KK+A+ DKTGRRAKRALKREAADKAAAAKHQ+HLAR GRK
Sbjct: 194 E-DSGASSSREPRKKEAAMDKTGRRAKRALKREAADKAAAAKHQQHLARLGRK 245

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BLAST of CmaCh02G012750 vs. TrEMBL
Match: B9GG85_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s28270g PE=4 SV=2)

HSP 1 Score: 322.0 bits (824), Expect = 6.2e-85
Identity = 157/223 (70.40%), Postives = 185/223 (82.96%), Query Frame = 1 

Query: 25  QIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETALVRGCEHAYCATCILRWASYNKNPT 84
           Q EM  KVE      G+H G+CAICL+KI LQETALV+GCEHAYC TCILRW++Y KNPT
Sbjct: 19  QGEMESKVESSERACGNHGGICAICLDKIVLQETALVKGCEHAYCVTCILRWSTYTKNPT 78

Query: 85  CPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASWYVPLIVEDREETYEDPDEYYPY 144
           CPQCKHPFEFL +HRSLDGS+ D+MFEESVCLLLRASW++ L VED E+ YEDP++YYPY
Sbjct: 79  CPQCKHPFEFLNIHRSLDGSIQDYMFEESVCLLLRASWFMTLTVEDHEDVYEDPEDYYPY 138

Query: 145 ----EDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQEARPVIRSTVPVHAGASSSR 204
               EDDD++ +E YL +SS+LRIGNRRWGDNGYVR G QEARPV ++     +GA +SR
Sbjct: 139 EFEDEDDDDDLDEVYLSSSSNLRIGNRRWGDNGYVRAGHQEARPVYQADFK-DSGACTSR 198

Query: 205 EPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 244
           EP KK+A+KD+TGRRAKR LKREAADKAAA+KHQ+HLAR GRK
Sbjct: 199 EPKKKEAAKDRTGRRAKRTLKREAADKAAASKHQQHLARLGRK 240

[Close]
BLAST of CmaCh02G012750 vs. TrEMBL
Match: A0A061GU17_THECC (RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_040934 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 4.0e-84
Identity = 162/241 (67.22%), Postives = 194/241 (80.50%), Query Frame = 1 

Query: 3   SSGISTESAELSDAVQILEVCNQIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETALVR 62
           +S I  ++ ++ +A+  L + +Q EM  K  +   G  +H G+CAICL+KI LQETALV+
Sbjct: 2   TSVIKIDAEQIVNALPNLSLQDQKEMKNKGAVGEEGCENHSGICAICLDKIVLQETALVK 61

Query: 63  GCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASW 122
           GCEHAYC TCILRWA+Y+K PTCPQCKHPFEFL VHRSLDG ++D+MFEESVCLLLRA+W
Sbjct: 62  GCEHAYCVTCILRWATYSKMPTCPQCKHPFEFLNVHRSLDGRINDYMFEESVCLLLRAAW 121

Query: 123 YVPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQEA 182
           + PLIVEDREE Y+D ++YYPYE+DD++ +EAY  +S SLRIGNRRWGDNGYVR GRQEA
Sbjct: 122 FEPLIVEDREELYDDLEDYYPYEEDDDQ-DEAYYASSPSLRIGNRRWGDNGYVRSGRQEA 181

Query: 183 RPVIRSTVPVHAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGR 242
           RPV RS     +GA SSREP KK+ +K   GRRAKRALKREAADKAAAAKHQEHL R GR
Sbjct: 182 RPVQRSNFQ-DSGAGSSREPKKKEVAKSTMGRRAKRALKREAADKAAAAKHQEHLMRLGR 240

Query: 243 K 244
           K
Sbjct: 242 K 240

[Close]
BLAST of CmaCh02G012750 vs. TrEMBL
Match: B9SY31_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0067240 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 3.4e-83
Identity = 153/244 (62.70%), Postives = 191/244 (78.28%), Query Frame = 1 

Query: 6   ISTESAELSDAVQILEVCNQIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETALVRGCE 65
           +  +  +L +++  L V +Q+E+  +V++H    G+H GVCAICL+KI LQETAL++GCE
Sbjct: 10  LQQQQQQLPNSLSHLSVQDQVEVQTEVKVHENPCGNHGGVCAICLDKIVLQETALIKGCE 69

Query: 66  HAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASWYVP 125
           HAYC  CILRWA+Y++ PTCPQCKHPFEFL VHRSLDGS+ D+MFEESVCLLLRA+W+ P
Sbjct: 70  HAYCVMCILRWATYSQKPTCPQCKHPFEFLNVHRSLDGSIQDYMFEESVCLLLRAAWFNP 129

Query: 126 LIVEDREETYEDPDEYYPYE------DDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGR 185
           LIVE  E+ Y+D D+YY YE      DD+++  + YL +SS+LRIGNR+WGDNGYVR GR
Sbjct: 130 LIVESHEDAYDDLDDYYVYEYGDDDDDDEDDLADVYLSSSSNLRIGNRKWGDNGYVRSGR 189

Query: 186 QEARPVIRSTVPVHAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLAR 244
           QEARP  R  V      SSS EP KK+ ++D+TGRRAKR LKREAADKAAAAKHQ+HLAR
Sbjct: 190 QEARPAYRPNVQDSGAGSSSSEPKKKETARDRTGRRAKRTLKREAADKAAAAKHQQHLAR 249

[Close]
BLAST of CmaCh02G012750 vs. TAIR10
Match: AT5G19430.1 (AT5G19430.1 RING/U-box superfamily protein)

HSP 1 Score: 260.0 bits (663), Expect = 1.5e-69
Identity = 141/245 (57.55%), Postives = 177/245 (72.24%), Query Frame = 1 

Query: 12  ELSDAVQILEVCNQIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETALVRGCEHAYCAT 71
           ++ D +Q L + NQ +   + EIH    G+H G CAICL++I LQETA+V+GCEH YC T
Sbjct: 12  QVIDGIQDLALQNQDKKKIQEEIHEPSFGNHGGCCAICLSEIPLQETAMVKGCEHTYCVT 71

Query: 72  CILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASWYVPLIVEDR 131
           CILRWAS  ++PTCPQCKHPF+FL VHR+LDGS+ DF+FEESVCLLLRASW+VPL V ++
Sbjct: 72  CILRWASCKESPTCPQCKHPFDFLSVHRALDGSIEDFLFEESVCLLLRASWFVPLDVVEQ 131

Query: 132 EE----TYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQEARPVIR 191
                  ++D D  Y YED+D++ +E YL   SSLRIGNRRWG NG+VR GRQEARPV R
Sbjct: 132 ASYSHGYHDDFDIPYDYEDEDDDLDEFYL-HGSSLRIGNRRWGGNGFVRSGRQEARPVQR 191

Query: 192 -----STVPVHAGASSSREPIKKDASKDKTGRRAKRALKREAADKA----AAAKHQEHLA 244
                S+    +G+SSS    K+  + + TGRRAKRA+KREAA+KA    AAAKH+ HL 
Sbjct: 192 YSGSGSSSSSSSGSSSSEPKDKQVKTTNTTGRRAKRAMKREAANKAAEVTAAAKHEAHLV 251

[Close]
BLAST of CmaCh02G012750 vs. TAIR10
Match: AT5G12310.1 (AT5G12310.1 RING/U-box superfamily protein)

HSP 1 Score: 238.4 bits (607), Expect = 4.6e-63
Identity = 136/243 (55.97%), Postives = 164/243 (67.49%), Query Frame = 1 

Query: 17  VQILEVCNQIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETALVRGCEHAYCATCILRW 76
           V +L + +Q E       +    G+H G CAICL+ I LQETA+V+GCEHAYC TCILRW
Sbjct: 14  VDVLPLQDQDEKKTPQVFNELSFGNHGGCCAICLDTIPLQETAMVKGCEHAYCVTCILRW 73

Query: 77  ASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASWYVPLIVEDR----- 136
           ASY + PTCPQCK PF+FL VHR+LDGSV DFMFEESVCLLLRASW+ PL   +R     
Sbjct: 74  ASYKEKPTCPQCKLPFDFLNVHRALDGSVEDFMFEESVCLLLRASWFQPLEAVERVSDND 133

Query: 137 --EETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQEARPVIRST 196
                ++ P EY   ++DD++ +E Y+   SSLR+GNRRWGDNG+VR GRQEARPV    
Sbjct: 134 NFNYDFDIPPEYEEEDEDDDDLDEFYM-QGSSLRLGNRRWGDNGFVRAGRQEARPVQHKN 193

Query: 197 VPVHA-----GASSSREPIKKDASKDKTGRRAKRALKREAADKA----AAAKHQEHLARF 244
               A      +SSS EP K+  S   TGRRAKRA+KREAA+KA    AAAKH+  L R 
Sbjct: 194 RGGQASGSEPASSSSCEP-KEKTSSAITGRRAKRAMKREAANKAAEAVAAAKHEALLVRL 253

[Close]
BLAST of CmaCh02G012750 vs. NCBI nr
Match: gi|778716917|ref|XP_011657615.1| (PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 7.5e-108
Identity = 202/244 (82.79%), Postives = 215/244 (88.11%), Query Frame = 1 

Query: 3   SSGISTESAELSDAVQILEVCNQIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETALVR 62
           SSGIS +SAE+SDAVQ    C+Q+EMGKKVEI GTGHGSHDG CAICLNKIALQETALVR
Sbjct: 4   SSGISIQSAEISDAVQEQVTCDQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVR 63

Query: 63  GCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASW 122
           GCEHAYCATCILRWASY K PTCPQCKHPFEFLIVHRSLDGS+HD+MFEESVCLLLRASW
Sbjct: 64  GCEHAYCATCILRWASYTKKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASW 123

Query: 123 YVPLIVEDREETYEDP--DEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 182
           Y P I+E+REETY+DP  D+YYPYEDDDEE E+AYLG S SLRIGNRRWG NGYVR GRQ
Sbjct: 124 YKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQ 183

Query: 183 EARPVIRSTVPVHAGASSSREPIKKDA-SKDKTGRRAKRALKREAADKAAAAKHQEHLAR 242
           EARPV+R       G SSSREP+ K A SKDKTGRRAKRALKREAADKAAAAKHQEHLAR
Sbjct: 184 EARPVLRQE---FTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKAAAAKHQEHLAR 243

Query: 243 FGRK 244
           FGRK
Sbjct: 244 FGRK 244

[Close]
BLAST of CmaCh02G012750 vs. NCBI nr
Match: gi|449444871|ref|XP_004140197.1| (PREDICTED: uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 7.5e-108
Identity = 202/244 (82.79%), Postives = 215/244 (88.11%), Query Frame = 1 

Query: 3   SSGISTESAELSDAVQILEVCNQIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETALVR 62
           SSGIS +SAE+SDAVQ    C+Q+EMGKKVEI GTGHGSHDG CAICLNKIALQETALVR
Sbjct: 36  SSGISIQSAEISDAVQEQVTCDQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVR 95

Query: 63  GCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASW 122
           GCEHAYCATCILRWASY K PTCPQCKHPFEFLIVHRSLDGS+HD+MFEESVCLLLRASW
Sbjct: 96  GCEHAYCATCILRWASYTKKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASW 155

Query: 123 YVPLIVEDREETYEDP--DEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 182
           Y P I+E+REETY+DP  D+YYPYEDDDEE E+AYLG S SLRIGNRRWG NGYVR GRQ
Sbjct: 156 YKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQ 215

Query: 183 EARPVIRSTVPVHAGASSSREPIKKDA-SKDKTGRRAKRALKREAADKAAAAKHQEHLAR 242
           EARPV+R       G SSSREP+ K A SKDKTGRRAKRALKREAADKAAAAKHQEHLAR
Sbjct: 216 EARPVLRQE---FTGPSSSREPVTKQASSKDKTGRRAKRALKREAADKAAAAKHQEHLAR 275

Query: 243 FGRK 244
           FGRK
Sbjct: 276 FGRK 276

[Close]
BLAST of CmaCh02G012750 vs. NCBI nr
Match: gi|659097507|ref|XP_008449664.1| (PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo])

HSP 1 Score: 396.7 bits (1018), Expect = 2.8e-107
Identity = 199/243 (81.89%), Postives = 214/243 (88.07%), Query Frame = 1 

Query: 3   SSGISTESAELSDAVQILEVCNQIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETALVR 62
           SSGIS +SAE+SDAVQ    C+Q+EMGKKVEI GTGHGSHDG CAICLNKIALQETALVR
Sbjct: 4   SSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVR 63

Query: 63  GCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASW 122
           GCEHAYCATCILRWASY + PTCPQCKHPFEFLIVHRSLDGS+HD+MFEESVCLLLRASW
Sbjct: 64  GCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASW 123

Query: 123 YVPLIVEDREETYEDP--DEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 182
           Y PLI E+REETY++P  D+YY YEDDDEE E+AYLG S SLRIGNRRWG NGYVR GRQ
Sbjct: 124 YKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQ 183

Query: 183 EARPVIRSTVPVHAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 242
           EARPV+R       G SSSR+P+ K ASKDKTGRRAKRALKREAADKAAAAKHQEHLARF
Sbjct: 184 EARPVLRQEFT--GGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 243

Query: 243 GRK 244
           GRK
Sbjct: 244 GRK 244

[Close]
BLAST of CmaCh02G012750 vs. NCBI nr
Match: gi|659097505|ref|XP_008449663.1| (PREDICTED: uncharacterized protein LOC103491476 isoform X1 [Cucumis melo])

HSP 1 Score: 396.7 bits (1018), Expect = 2.8e-107
Identity = 199/243 (81.89%), Postives = 214/243 (88.07%), Query Frame = 1 

Query: 3   SSGISTESAELSDAVQILEVCNQIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETALVR 62
           SSGIS +SAE+SDAVQ    C+Q+EMGKKVEI GTGHGSHDG CAICLNKIALQETALVR
Sbjct: 36  SSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVR 95

Query: 63  GCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASW 122
           GCEHAYCATCILRWASY + PTCPQCKHPFEFLIVHRSLDGS+HD+MFEESVCLLLRASW
Sbjct: 96  GCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASW 155

Query: 123 YVPLIVEDREETYEDP--DEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 182
           Y PLI E+REETY++P  D+YY YEDDDEE E+AYLG S SLRIGNRRWG NGYVR GRQ
Sbjct: 156 YKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQ 215

Query: 183 EARPVIRSTVPVHAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 242
           EARPV+R       G SSSR+P+ K ASKDKTGRRAKRALKREAADKAAAAKHQEHLARF
Sbjct: 216 EARPVLRQEFT--GGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 275

Query: 243 GRK 244
           GRK
Sbjct: 276 GRK 276

[Close]
BLAST of CmaCh02G012750 vs. NCBI nr
Match: gi|595899827|ref|XP_007213836.1| (hypothetical protein PRUPE_ppa010547mg [Prunus persica])

HSP 1 Score: 328.9 bits (842), Expect = 7.3e-87
Identity = 166/233 (71.24%), Postives = 194/233 (83.26%), Query Frame = 1 

Query: 13  LSDAVQILEVCNQIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETALVRGCEHAYCATC 72
           LSD +      +Q EM    +      G+H GVCAICL++I LQETALV+GCEHAYCATC
Sbjct: 14  LSDLINSSTQQHQGEMQSNTDNVEKRCGNHGGVCAICLDEIMLQETALVKGCEHAYCATC 73

Query: 73  ILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASWYVPLIVEDRE 132
           ILRW +Y++ PTCPQCKHPFEFL VHRSLDGS+HD+MFEESVCLLLRA W+ PLIVE+RE
Sbjct: 74  ILRWVTYSQKPTCPQCKHPFEFLNVHRSLDGSIHDYMFEESVCLLLRAKWFEPLIVEERE 133

Query: 133 ETYEDPDE-YYPYED-DDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQEARPVIRSTV 192
           + Y+DPD+ YYPYED +D++ +EAY  +SSS+RIGNRRWGDNGYVRGGRQEARPV RS +
Sbjct: 134 DVYDDPDDYYYPYEDEEDDDLDEAYFSSSSSIRIGNRRWGDNGYVRGGRQEARPVNRSNI 193

Query: 193 PVHAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 244
              +GASSSREP KK+A+ DKTGRRAKRALKREAADKAAAAKHQ+HLAR GRK
Sbjct: 194 E-DSGASSSREPRKKEAAMDKTGRRAKRALKREAADKAAAAKHQQHLARLGRK 245

The following BLAST results are available for this feature:
BLAST of CmaCh02G012750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh02G012750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KK15_CUCSA5.2e-10882.79Uncharacterized protein OS=Cucumis sativus GN=Csa_6G431760 PE=4 SV=1[more]
M5X7I0_PRUPE5.1e-8771.24Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010547mg PE=4 SV=1[more]
B9GG85_POPTR6.2e-8570.40Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s28270g PE=4 SV=2[more]
A0A061GU17_THECC4.0e-8467.22RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_040934 PE=4 S... [more]
B9SY31_RICCO3.4e-8362.70Protein binding protein, putative OS=Ricinus communis GN=RCOM_0067240 PE=4 SV=1[more]
BLAST of CmaCh02G012750 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G19430.11.5e-6957.55 RING/U-box superfamily protein[more]
AT5G12310.14.6e-6355.97 RING/U-box superfamily protein[more]
BLAST of CmaCh02G012750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778716917|ref|XP_011657615.1|7.5e-10882.79PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis sativus][more]
gi|449444871|ref|XP_004140197.1|7.5e-10882.79PREDICTED: uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus][more]
gi|659097507|ref|XP_008449664.1|2.8e-10781.89PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo][more]
gi|659097505|ref|XP_008449663.1|2.8e-10781.89PREDICTED: uncharacterized protein LOC103491476 isoform X1 [Cucumis melo][more]
gi|595899827|ref|XP_007213836.1|7.3e-8771.24hypothetical protein PRUPE_ppa010547mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G012750.1CmaCh02G012750.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 46..89
score: 7.
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 46..88
score: 7.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 46..89
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 43..96
score: 4.6
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 64..73
scor
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 40..96
score: 2.79

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh02G012750Cucsa.087010Cucumber (Gy14) v1cgycmaB0167
CmaCh02G012750Cla008576Watermelon (97103) v1cmawmB592
CmaCh02G012750Csa6G431760Cucumber (Chinese Long) v2cmacuB630
CmaCh02G012750MELO3C014562Melon (DHL92) v3.5.1cmameB572
CmaCh02G012750ClCG02G022870Watermelon (Charleston Gray)cmawcgB541
CmaCh02G012750CSPI06G23870Wild cucumber (PI 183967)cmacpiB635
CmaCh02G012750CmoCh02G013160Cucurbita moschata (Rifu)cmacmoB619
CmaCh02G012750CmoCh20G001190Cucurbita moschata (Rifu)cmacmoB607
CmaCh02G012750Lsi10G010890Bottle gourd (USVL1VR-Ls)cmalsiB540
CmaCh02G012750Cp4.1LG16g08580Cucurbita pepo (Zucchini)cmacpeB627
CmaCh02G012750Cp4.1LG05g04790Cucurbita pepo (Zucchini)cmacpeB646
CmaCh02G012750MELO3C014562.2Melon (DHL92) v3.6.1cmamedB654
CmaCh02G012750CsaV3_6G039010Cucumber (Chinese Long) v3cmacucB0752
CmaCh02G012750Cla97C02G048950Watermelon (97103) v2cmawmbB629
CmaCh02G012750Bhi10G000198Wax gourdcmawgoB0757
CmaCh02G012750CsGy6G023220Cucumber (Gy14) v2cgybcmaB819
CmaCh02G012750Carg02689Silver-seed gourdcarcmaB1268
CmaCh02G012750Carg06878Silver-seed gourdcarcmaB0733
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh02G012750CmaCh20G001100Cucurbita maxima (Rimu)cmacmaB470
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh02G012750Cucurbita pepo (Zucchini)cmacpeB632
CmaCh02G012750Cucurbita pepo (Zucchini)cmacpeB643
CmaCh02G012750Cucumber (Gy14) v2cgybcmaB120
CmaCh02G012750Cucumber (Chinese Long) v3cmacucB0691
CmaCh02G012750Cucurbita maxima (Rimu)cmacmaB112
CmaCh02G012750Cucurbita maxima (Rimu)cmacmaB159
CmaCh02G012750Cucurbita moschata (Rifu)cmacmoB573
CmaCh02G012750Cucurbita moschata (Rifu)cmacmoB574