MELO3C012486 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C012486
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
Location	chr10 : 136020 .. 140067 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATATCTAAGGGTGGTGGAGAAATAGAACTGGGAGAAGGAAAGTAGGGATTTGAAGATTGTGAGAGGCAGCGCAGCGATAGCCGAGCGGAGTTGGCGAAGGCAGAGCGAAGAAAAACTCGGAAAAATGGCGTTCACAGTTCGAGGTTTGAAGGTTCCGCCGAACTCCGCGAGTCTTGAAGAAGCCCGGAATCGGGTCTTCGATTTCTTCAGATCAGCATGTAGATCATTGCCAGCAATCATGGACATTTACAACTTGGATGATGTCACTACTGTTTCTCAACTCCGTTCTACCATCGCCTCTGAGATCCGCAAGAATTCTCACGTCACTGACCCTAAGGTCTTCCCGTTCCTTCAATTTACTCTATTTGCTTCTTAATTCTATATGATGTTCGTTTTTCCTTAATGGGTTGAGGAAATTTTCCCTCTGTGTCGATTAGAGACATGAGGAATTTCGAAGCTTACTTTCCGTTCATTTGAAACGAAGCTTTATAGAAATATAAAACAAAGAAAAGAGTTTTAGAGGATTTTGGTGCCCTAGGGATTTAGAGGATTGGTGGAAAATCTATTCTATATGTTTCTTTTTTCTTGGCCTCGTCCTTCTAATTATGGGAGTTGGTTATTAGTTCTTTCAGTGCTATGGTGAATTTGATGGTATGATTCTTCGGACAACCCATCAATTGCTGACTTTTTGGAGAATTTATTTCAAAGGATTTTATTGAAGATAGGCGTGGAAGAACAAGTTTGAAAGAACCTAGGCTTAGAACTCATTTATTTACTTCTTTTGCTACTGCAATTTTACAAAAAGTTCTATTTTTCTCCTAGAGAAGTTCTCTTTTTCGAGGTCTTCAGTTAGAAAGAAACCCAGAGTGTTGAATCGTTATTTTGGCTGAAGATAGAAGAGGTTGGAAAGCATATATTTCTCTTTTGTCTTCACTTCTTGAAAGCCAGGTCCAGAACGAGAGGAAAGAGAATCCCCAAGACAAAAAGCCATCCACGTACTTCATACGTTGCTGCTCTTAAGAAGGAAAATTCCCATATCTTTTCACCCTCTACAGAACTAGCGTATTTATCAACCACACCAAAGGCTCCATCTCCCATATCCATCAACAAATCAGCCCATGCATATCCACATTCCTCCATACATTGCTGCTCCATACTGCTTCGACGACGATTGGTACAACATTATAAGAGCTTTCAACATTCATGAGTAGTGCCTGTATCATCAATCCTTTCAACACTGACAGGGTTGCCTATCTGTGAGGATATTGATCAAGCCAAAACCCTTAGTACAGTAAAGGCTTGGTACAAGGTAGGAAGATATTTGGTAAAATTCTCCCCTTAGAGTGCTGAAAATGCAACGAAAGATCAGGTTGTCCTTAGCTATGGAGGTTGGATCAAAATTAGGAACCTCCCACTTGATTGATGGGATAATGACACGCTAGTTCATTGGAAAATCTTGTGGTGGGTTCCTTGAAATTTCCAAAAAGACATTGAAACGACCAGATCTCTTTGAAGCTTTCAACAAAGGTCGACAGAAATAATAATAAAGGTTTTATTCCAGCTGTAATCGATATTCCTTCTTCTCCATATCACCGATCAAAGTACATATCGACCTCCTTTTTAATTATGAAAACTACCTCTGCCGGAATCTGTTGATCCATCAAAGATGATGCCAACAAGCACATCAAAATTCATGCAAAAAGGTGTCCTTGGCCCATGTCCTGCTTTCGTGGAAAATAGCATCTCGTTTCCACAGCCTCCACATTCCCGAACAAGCTTGCTGCACCCACATTGCCTAGTGTTCAACAACTACTGGAATCCAACTCGGAAATCACCAATTCCAAGTGGTGTAGCCCCACTAGTCTCTGCGCAATCCCTACCCAAAAATACCAAAACACTAAACCCTTCGTTACCTGATCCTTCATGCCCTCTGGCCGCTTTACCTAATCCTAATTCTATTTCAGTTTATTTTACCCATTGCTGACCACCAACCCACCGACCTACTCAATTCTCTTCTCTTGAGATCATTGACTATACTCCTAATTCTGTTCTGACGACCTTTGGATGCTTGATAATCCACTGATGCTGAGTGCTCTGTTTTTTCGAGTCTAAAACAGAGGATTCCTTTTTCGGCTTGACCTTGTGCTTATTGATCTTCTCTTCTTGTGGTCTGTTTGCATCTTCAGAAAGACGCGTTTTCAGCTTGCTCTGTTCTGTATACCACTTTATGTAATCATGCTTTGATTTGAAGCCTTTGTTTCTTGATAATCCACCGATGATGAGTGCTCTGTTTTTTTTAGAGTCCAAAACAGAGGATTCCTTTTTCGGCTTGACCTTGTGCTTATCCATCTTCTCNNNNNNNNNNNNNNNNNNNNCGATGATGAGTGCTCTGTTTTTTGAGTCCAAAACAGAGGATTCCTTTTTCGGCTTGACCTTGTGCTTATCCATCTTCTCTTCTTGTGGTCTGTTTGCATCTTCAGAAAGACACATTTTCACCTTGCTCTGTTCTGAATACCACTTTATGTAATCATGCTTTGATTTGAAGCTCTTCAACATATTGAGAAACATTTTCCATCCCTCTTTTACCTCACCCAATAGAATATGTAAGAATGATCTTCCTTCTGTTCGGGGTCAAAAGTTGCATCTTAACACCCAATCTTTCTCTAATCTGAATCTTGAGACTTCTGTCATGCCACTGTCTATTCTTCCTTCCAGCAGAGGTGAGACCTTGATAGTGACAGGATTTTATTCGCCTCCATATCTTCAAGATGGAATAAATCATGCTCTTGCCATATGCAGTAGGGAGAGTCAAAACCCTGCGGCTTTCTTACTTTCATTCCTTGCTTTTGCGCCTGTAGAGCATTCTTGTTCGTCATTTGTCTTGTCGTTTCGCTTTCTTGGCTTGTTTGTTTTGGTTCAAATTCTATCATCGTTTCTTTGGGGTGCTCCCTATCCGAACTTTTTATGGTATTGTGTTAGGATGGTCAAGGTGGGTTACGTGTGGGATACTGTGTGACCCAGACATGAGGAATTTTGATAACTTCTTTTTAGTTCTTCTTACTTAATCTCCAGGTGGAGGCTATATTTGTAATTCACCTATTGGTGTTCAGCGTTTTCTCCAAATTTTCCTTTTTTAATAAAATTGTTTCTCTTCCAAAAAAATGAGTGGATGTTAGCTTGTGGTAGGCCGTTATTTTTGCTTGATTATTTTAATTTCCTAAGATGCTGCTCTTCTCACTGTATTGGTGTCGGACTGCGAACGTTAAGATTATTTTTGTTAGTTTCCAACTCTTTTTCTTTTACAGGTGATTGATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACTGAGCATGCGAAGCAACGGCATCACATCATTGGTCAGTATGTGGTTGGTCGCGAAGGACTTGTGCAAGATTTTGGCGCCAAGGATCAAGGCATGTCCAATTTTCTCAAAAACTTCTACAGAAGTAACTACTTCTGAACTTCATCTTTCCTGGAATTATTCCAGTGGAATATGATATCCATAGTTTTAATTTGTGATCTTGAGTAATAATGAAGGAACTATACCTGTCCTCTAGACCATGACATTATTTGATCGTTTTGTGGGATTGAATTGTTGGTATATTATAACCAAAGCAATCCAAGATCTTTGTTTCTATTTACTCGGTTCGTTAACTATTAAGCCTAAATGTGGTGTCTACTCTATGCTTTGGTTCCAGATGGTGCTTTCCTCGGTTTCGATTGGCTTCATTCATCACTGCCATTTGTATAAGTTCTATACATTATATAACTTGAAAAGGGACTGTGGTCTCTATTTATATATAGAGAGAGAAAAGTAGAACGAAAACTATTATCTTAATTGTGGTGTGTGAAGAATGCACAAAAGCCATTGATTTGATTGGATTAAATATAATTTTTAGGTTTGGATAAGAGCTCTAACTTCATTGTAACGATTGGGGTGTCTAATAGAGCCAATTTAAAGGCACTTTTTACAGTGATTTTGATTTCATTTTCGAAATCACATATTACTATTAATT

mRNA sequence

GATATCTAAGGGTGGTGGAGAAATAGAACTGGGAGAAGGAAAGTAGGGATTTGAAGATTGTGAGAGGCAGCGCAGCGATAGCCGAGCGGAGTTGGCGAAGGCAGAGCGAAGAAAAACTCGGAAAAATGGCGTTCACAGTTCGAGGTTTGAAGGTTCCGCCGAACTCCGCGAGTCTTGAAGAAGCCCGGAATCGGGTCTTCGATTTCTTCAGATCAGCATGTAGATCATTGCCAGCAATCATGGACATTTACAACTTGGATGATGTCACTACTGTTTCTCAACTCCGTTCTACCATCGCCTCTGAGATCCGCAAGAATTCTCACGTCACTGACCCTAAGTTTCCAACTCTTTTTCTTTTACAGGTGATTGATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACTGAGCATGCGAAGCAACGGCATCACATCATTGGTCAGTATGTGGTTGGTCGCGAAGGACTTGTGCAAGATTTTGGCGCCAAGGATCAAGGCATGTCCAATTTTCTCAAAAACTTCTACAGAAGTAACTACTTCTGAACTTCATCTTTCCTGGAATTATTCCAGTGGAATATGATATCCATAGTTTTAATTTGTGATCTTGAGTAATAATGAAGGAACTATACCTGTCCTCTAGACCATGACATTATTTGATCGTTTTGTGGGATTGAATTGTTGGTATATTATAACCAAAGCAATCCAAGATCTTTGTTTCTATTTACTCGGTTCGTTAACTATTAAGCCTAAATGTGGTGTCTACTCTATGCTTTGGTTCCAGATGGTGCTTTCCTCGGTTTCGATTGGCTTCATTCATCACTGCCATTTGTATAAGTTCTATACATTATATAACTTGAAAAGGGACTGTGGTCTCTATTTATATATAGAGAGAGAAAAGTAGAACGAAAACTATTATCTTAATTGTGGTGTGTGAAGAATGCACAAAAGCCATTGATTTGATTGGATTAAATATAATTTTTAGGTTTGGATAAGAGCTCTAACTTCATTGTAACGATTGGGGTGTCTAATAGAGCCAATTTAAAGGCACTTTTTACAGTGATTTTGATTTCATTTTCGAAATCACATATTACTATTAATT

Coding sequence (CDS)

ATGGCGTTCACAGTTCGAGGTTTGAAGGTTCCGCCGAACTCCGCGAGTCTTGAAGAAGCCCGGAATCGGGTCTTCGATTTCTTCAGATCAGCATGTAGATCATTGCCAGCAATCATGGACATTTACAACTTGGATGATGTCACTACTGTTTCTCAACTCCGTTCTACCATCGCCTCTGAGATCCGCAAGAATTCTCACGTCACTGACCCTAAGTTTCCAACTCTTTTTCTTTTACAGGTGATTGATATGCTTCTTTTCAAGGGAATGGAAGAGCTTGGTAACATTACTGAGCATGCGAAGCAACGGCATCACATCATTGGTCAGTATGTGGTTGGTCGCGAAGGACTTGTGCAAGATTTTGGCGCCAAGGATCAAGGCATGTCCAATTTTCTCAAAAACTTCTACAGAAGTAACTACTTCTGA

Protein sequence

MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDPKFPTLFLLQVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGAKDQGMSNFLKNFYRSNYF*

Homology

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BLAST of MELO3C012486 vs. Swiss-Prot
Match: NDUA6_ARATH (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Arabidopsis thaliana GN=At3g12260 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 4.7e-46
Identity = 93/138 (67.39%), Postives = 108/138 (78.26%), Query Frame = 1


Query: 3   FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIR 62
           F +R + VPPNSA+L EAR RVFDFFR+ACRS+P IMDIYNL DV   SQLR  I+++IR
Sbjct: 5   FALRKIGVPPNSANLTEARRRVFDFFRAACRSIPTIMDIYNLQDVVAPSQLRYAISAQIR 64

Query: 63  KNSHVTDPKFPTLFLLQVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGA 122
            N+H+TDPK        VID+L+FKGMEEL +I +HAKQRHHIIGQYVVG EGLVQ+ G 
Sbjct: 65  NNAHITDPK--------VIDLLIFKGMEELTDIVDHAKQRHHIIGQYVVG-EGLVQNTGN 124

Query: 123 KDQGMSNFLKNFYRSNYF 141
           KDQG ++FLKNFY SNYF
Sbjct: 125 KDQGKTDFLKNFYTSNYF 133

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BLAST of MELO3C012486 vs. Swiss-Prot
Match: NDUA6_MOUSE (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Mus musculus GN=Ndufa6 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 34/96 (35.42%), Postives = 48/96 (50.00%), Query Frame = 1


Query: 11  PPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDP 70
           P  S  L EA+ RV + +R+  R +P  + +  LD   TV Q R  +     KN+HVTDP
Sbjct: 22  PIFSRDLNEAKRRVRELYRAWYREVPNTVHLMQLD--ITVKQGRDKVREMFMKNAHVTDP 81

Query: 71  KFPTLFLLQVIDMLLFKGMEELGNITEHAKQRHHII 107
           +        V+D+L+ KG  EL    +  KQR H++
Sbjct: 82  R--------VVDLLVIKGKMELQETIKVWKQRTHVM 107

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BLAST of MELO3C012486 vs. Swiss-Prot
Match: NDUA6_BOVIN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Bos taurus GN=NDUFA6 PE=1 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 31/96 (32.29%), Postives = 50/96 (52.08%), Query Frame = 1


Query: 11  PPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIRKNSHVTDP 70
           P  S  + EA+ RV + +R+  R +P  + ++ LD   +V Q R  +    +KN+H+TDP
Sbjct: 19  PIFSRDMNEAKRRVRELYRAWYREVPNTVHLFQLD--ISVKQGRDKVREMFKKNAHITDP 78

Query: 71  KFPTLFLLQVIDMLLFKGMEELGNITEHAKQRHHII 107
           +        V+D+L+ KG  EL    +  KQR H++
Sbjct: 79  R--------VVDLLVIKGKMELEETIKVWKQRTHVM 104

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BLAST of MELO3C012486 vs. TrEMBL
Match: A0A0A0KRV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G624440 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 5.0e-63
Identity = 126/140 (90.00%), Postives = 129/140 (92.14%), Query Frame = 1


Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIMDIYNLDDV TVSQLRS IASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60

Query: 61  IRKNSHVTDPKFPTLFLLQVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDF 120
           IRKNSHVTDPK        VIDMLLFKGMEELGNITEHAKQRHHIIGQYV+GREGLVQDF
Sbjct: 61  IRKNSHVTDPK--------VIDMLLFKGMEELGNITEHAKQRHHIIGQYVLGREGLVQDF 120

Query: 121 GAKDQGMSNFLKNFYRSNYF 141
           GAKDQG SNFLKNFY+SNYF
Sbjct: 121 GAKDQGRSNFLKNFYKSNYF 132

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BLAST of MELO3C012486 vs. TrEMBL
Match: A0A061FR11_THECC (LYR family of Fe/S cluster biogenesis protein OS=Theobroma cacao GN=TCM_045026 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-55
Identity = 111/140 (79.29%), Postives = 121/140 (86.43%), Query Frame = 1


Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFT+R +KVP NS SLEEA+ RVFDFFRSACRS+PAIMDIYNLDDV T SQLRST+ASE
Sbjct: 43  MAFTLRSVKVPSNSVSLEEAKGRVFDFFRSACRSIPAIMDIYNLDDVVTASQLRSTVASE 102

Query: 61  IRKNSHVTDPKFPTLFLLQVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDF 120
           IRKNSHVT+PK        VIDMLLFKGMEEL NI EHAKQRHHIIGQYVVGR+GLVQD 
Sbjct: 103 IRKNSHVTNPK--------VIDMLLFKGMEELNNIVEHAKQRHHIIGQYVVGRQGLVQDL 162

Query: 121 GAKDQGMSNFLKNFYRSNYF 141
             KD+GMS+FLKNFY+SNYF
Sbjct: 163 NTKDEGMSDFLKNFYKSNYF 174

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BLAST of MELO3C012486 vs. TrEMBL
Match: A0A067KWF8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24545 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 7.3e-54
Identity = 109/140 (77.86%), Postives = 122/140 (87.14%), Query Frame = 1


Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFT+R LKVPPNSASLEEAR RVFDFFR+ACRS+P IMDIYNL DV TVS+LRS+IAS+
Sbjct: 1   MAFTLRSLKVPPNSASLEEARARVFDFFRTACRSIPTIMDIYNLQDVVTVSELRSSIASQ 60

Query: 61  IRKNSHVTDPKFPTLFLLQVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDF 120
           IRKNS+VT+PK        VIDMLLFKGMEEL NI EHAKQRHHIIGQYVVG+ GLVQD 
Sbjct: 61  IRKNSNVTNPK--------VIDMLLFKGMEELNNIVEHAKQRHHIIGQYVVGQHGLVQDL 120

Query: 121 GAKDQGMSNFLKNFYRSNYF 141
            +KDQGMS+FLKNFY+SNY+
Sbjct: 121 DSKDQGMSDFLKNFYKSNYY 132

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BLAST of MELO3C012486 vs. TrEMBL
Match: A0A0D2VQ58_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G218700 PE=3 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 8.1e-53
Identity = 105/140 (75.00%), Postives = 120/140 (85.71%), Query Frame = 1


Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAF++R +KVPPNSASLEEAR+RVFDFFR ACRS+P IMDIYNLDDV T S+LRS+I+SE
Sbjct: 1   MAFSLRSVKVPPNSASLEEARSRVFDFFRKACRSIPTIMDIYNLDDVVTKSELRSSISSE 60

Query: 61  IRKNSHVTDPKFPTLFLLQVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDF 120
           IRKNSHVT+PK        VID+LLFKGMEEL NI EHAKQRHHIIGQYV+GR+GL QD 
Sbjct: 61  IRKNSHVTNPK--------VIDLLLFKGMEELNNIVEHAKQRHHIIGQYVLGRQGLAQDL 120

Query: 121 GAKDQGMSNFLKNFYRSNYF 141
             KD+G S+FLKNFY+SNYF
Sbjct: 121 DTKDEGTSDFLKNFYKSNYF 132

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BLAST of MELO3C012486 vs. TrEMBL
Match: A0A0B0PLZ1_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_03720 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.4e-52
Identity = 104/140 (74.29%), Postives = 120/140 (85.71%), Query Frame = 1


Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFT+R +KVPPNSASLEEA++RVFDFFR ACRS+P IMDIYNLDDV T S+LRS+I+S+
Sbjct: 1   MAFTLRSVKVPPNSASLEEAKSRVFDFFRQACRSIPTIMDIYNLDDVVTKSELRSSISSQ 60

Query: 61  IRKNSHVTDPKFPTLFLLQVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDF 120
           IRKNSHVT+PK        VID+LLFKGMEEL NI EHAKQRHHIIGQYV+GR+GL QD 
Sbjct: 61  IRKNSHVTNPK--------VIDLLLFKGMEELNNIVEHAKQRHHIIGQYVLGRQGLAQDL 120

Query: 121 GAKDQGMSNFLKNFYRSNYF 141
             KD+G S+FLKNFY+SNYF
Sbjct: 121 DTKDEGTSDFLKNFYKSNYF 132

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BLAST of MELO3C012486 vs. TAIR10
Match: AT3G12260.1 (AT3G12260.1 LYR family of Fe/S cluster biogenesis protein)

HSP 1 Score: 185.3 bits (469), Expect = 2.7e-47
Identity = 93/138 (67.39%), Postives = 108/138 (78.26%), Query Frame = 1


Query: 3   FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASEIR 62
           F +R + VPPNSA+L EAR RVFDFFR+ACRS+P IMDIYNL DV   SQLR  I+++IR
Sbjct: 5   FALRKIGVPPNSANLTEARRRVFDFFRAACRSIPTIMDIYNLQDVVAPSQLRYAISAQIR 64

Query: 63  KNSHVTDPKFPTLFLLQVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDFGA 122
            N+H+TDPK        VID+L+FKGMEEL +I +HAKQRHHIIGQYVVG EGLVQ+ G 
Sbjct: 65  NNAHITDPK--------VIDLLIFKGMEELTDIVDHAKQRHHIIGQYVVG-EGLVQNTGN 124

Query: 123 KDQGMSNFLKNFYRSNYF 141
           KDQG ++FLKNFY SNYF
Sbjct: 125 KDQGKTDFLKNFYTSNYF 133

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BLAST of MELO3C012486 vs. NCBI nr
Match: gi|659092257|ref|XP_008446979.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 258.8 bits (660), Expect = 5.4e-66
Identity = 132/140 (94.29%), Postives = 132/140 (94.29%), Query Frame = 1


Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60

Query: 61  IRKNSHVTDPKFPTLFLLQVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDF 120
           IRKNSHVTDPK        VIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDF
Sbjct: 61  IRKNSHVTDPK--------VIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDF 120

Query: 121 GAKDQGMSNFLKNFYRSNYF 141
           GAKDQGMSNFLKNFYRSNYF
Sbjct: 121 GAKDQGMSNFLKNFYRSNYF 132

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BLAST of MELO3C012486 vs. NCBI nr
Match: gi|449449258|ref|XP_004142382.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 248.4 bits (633), Expect = 7.2e-63
Identity = 126/140 (90.00%), Postives = 129/140 (92.14%), Query Frame = 1


Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLPAIMDIYNLDDV TVSQLRS IASE
Sbjct: 1   MAFTVRGLKVPPNSASLEEARSRVFDFFRSACRSLPAIMDIYNLDDVATVSQLRSAIASE 60

Query: 61  IRKNSHVTDPKFPTLFLLQVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDF 120
           IRKNSHVTDPK        VIDMLLFKGMEELGNITEHAKQRHHIIGQYV+GREGLVQDF
Sbjct: 61  IRKNSHVTDPK--------VIDMLLFKGMEELGNITEHAKQRHHIIGQYVLGREGLVQDF 120

Query: 121 GAKDQGMSNFLKNFYRSNYF 141
           GAKDQG SNFLKNFY+SNYF
Sbjct: 121 GAKDQGRSNFLKNFYKSNYF 132

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BLAST of MELO3C012486 vs. NCBI nr
Match: gi|590568839|ref|XP_007010910.1| (LYR family of Fe/S cluster biogenesis protein [Theobroma cacao])

HSP 1 Score: 223.8 bits (569), Expect = 1.9e-55
Identity = 111/140 (79.29%), Postives = 121/140 (86.43%), Query Frame = 1


Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFT+R +KVP NS SLEEA+ RVFDFFRSACRS+PAIMDIYNLDDV T SQLRST+ASE
Sbjct: 43  MAFTLRSVKVPSNSVSLEEAKGRVFDFFRSACRSIPAIMDIYNLDDVVTASQLRSTVASE 102

Query: 61  IRKNSHVTDPKFPTLFLLQVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDF 120
           IRKNSHVT+PK        VIDMLLFKGMEEL NI EHAKQRHHIIGQYVVGR+GLVQD 
Sbjct: 103 IRKNSHVTNPK--------VIDMLLFKGMEELNNIVEHAKQRHHIIGQYVVGRQGLVQDL 162

Query: 121 GAKDQGMSNFLKNFYRSNYF 141
             KD+GMS+FLKNFY+SNYF
Sbjct: 163 NTKDEGMSDFLKNFYKSNYF 174

[Close]

BLAST of MELO3C012486 vs. NCBI nr
Match: gi|1009153610|ref|XP_015894726.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 222.2 bits (565), Expect = 5.6e-55
Identity = 107/140 (76.43%), Postives = 123/140 (87.86%), Query Frame = 1


Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           M+F++R +KVPPNSASLEEAR+RVFDFFR ACRS+P+++D+YNLDDV TVS+LRSTIASE
Sbjct: 1   MSFSLRSVKVPPNSASLEEARSRVFDFFREACRSIPSVIDMYNLDDVVTVSRLRSTIASE 60

Query: 61  IRKNSHVTDPKFPTLFLLQVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDF 120
           IRKNSHVTDPK        VIDMLLFKG EEL N+ EHAKQRHH+IGQYVVGR+GL+QD 
Sbjct: 61  IRKNSHVTDPK--------VIDMLLFKGTEELNNVLEHAKQRHHLIGQYVVGRQGLIQDI 120

Query: 121 GAKDQGMSNFLKNFYRSNYF 141
           G KDQG+SNFLKNFY SNYF
Sbjct: 121 GTKDQGISNFLKNFYTSNYF 132

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BLAST of MELO3C012486 vs. NCBI nr
Match: gi|802574147|ref|XP_012068683.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 218.0 bits (554), Expect = 1.0e-53
Identity = 109/140 (77.86%), Postives = 122/140 (87.14%), Query Frame = 1


Query: 1   MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPAIMDIYNLDDVTTVSQLRSTIASE 60
           MAFT+R LKVPPNSASLEEAR RVFDFFR+ACRS+P IMDIYNL DV TVS+LRS+IAS+
Sbjct: 1   MAFTLRSLKVPPNSASLEEARARVFDFFRTACRSIPTIMDIYNLQDVVTVSELRSSIASQ 60

Query: 61  IRKNSHVTDPKFPTLFLLQVIDMLLFKGMEELGNITEHAKQRHHIIGQYVVGREGLVQDF 120
           IRKNS+VT+PK        VIDMLLFKGMEEL NI EHAKQRHHIIGQYVVG+ GLVQD 
Sbjct: 61  IRKNSNVTNPK--------VIDMLLFKGMEELNNIVEHAKQRHHIIGQYVVGQHGLVQDL 120

Query: 121 GAKDQGMSNFLKNFYRSNYF 141
            +KDQGMS+FLKNFY+SNY+
Sbjct: 121 DSKDQGMSDFLKNFYKSNYY 132

The following BLAST results are available for this feature:

BLAST of MELO3C012486 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NDUA6_ARATH	4.7e-46	67.39	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Arabidopsis thal...	[more]
NDUA6_MOUSE	1.3e-06	35.42	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Mus musculus GN=...	[more]
NDUA6_BOVIN	1.3e-06	32.29	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Bos taurus GN=ND...	[more]

BLAST of MELO3C012486 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRV0_CUCSA	5.0e-63	90.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G624440 PE=4 SV=1	[more]
A0A061FR11_THECC	1.3e-55	79.29	LYR family of Fe/S cluster biogenesis protein OS=Theobroma cacao GN=TCM_045026 P...	[more]
A0A067KWF8_JATCU	7.3e-54	77.86	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24545 PE=4 SV=1	[more]
A0A0D2VQ58_GOSRA	8.1e-53	75.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G218700 PE=3 SV=1	[more]
A0A0B0PLZ1_GOSAR	1.4e-52	74.29	Uncharacterized protein OS=Gossypium arboreum GN=F383_03720 PE=3 SV=1	[more]

BLAST of MELO3C012486 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12260.1	2.7e-47	67.39	LYR family of Fe/S cluster biogenesis protein	[more]

BLAST of MELO3C012486 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659092257\|ref\|XP_008446979.1\|	5.4e-66	94.29	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|449449258\|ref\|XP_004142382.1\|	7.2e-63	90.00	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|590568839\|ref\|XP_007010910.1\|	1.9e-55	79.29	LYR family of Fe/S cluster biogenesis protein [Theobroma cacao]	[more]
gi\|1009153610\|ref\|XP_015894726.1\|	5.6e-55	76.43	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]
gi\|802574147\|ref\|XP_012068683.1\|	1.0e-53	77.86	PREDICTED: NADH dehydrogenase [ubiquinone]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0006096	glycolytic process
biological_process	GO:0009853	photorespiration
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU46984	melon EST collection version 4.0	transcribed_cluster
MU61963	melon EST collection version 4.0	transcribed_cluster
MU66762	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012486T1	MELO3C012486T1	mRNA
MELO3C012486T2	MELO3C012486T2	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU46984	MU46984	transcribed_cluster
MU66762	MU66762	transcribed_cluster
MU61963	MU61963	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12964	NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNIT	coord: 2..64 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C012486	Csa5G624440	Cucumber (Chinese Long) v2	cumeB377
MELO3C012486	Cla009926	Watermelon (97103) v1	mewmB062
MELO3C012486	ClCG05G026940	Watermelon (Charleston Gray)	mewcgB063
MELO3C012486	Cla97C05G109190	Watermelon (97103) v2	mewmbB061
MELO3C012486	Bhi07G001013	Wax gourd	mewgoB076
MELO3C012486	CSPI05G27740	Wild cucumber (PI 183967)	cpimeB369
MELO3C012486	Cucsa.307830	Cucumber (Gy14) v1	cgymeB508
MELO3C012486	CmaCh04G013200	Cucurbita maxima (Rimu)	cmameB640
MELO3C012486	CmoCh04G013920	Cucurbita moschata (Rifu)	cmomeB631
MELO3C012486	Lsi04G000120	Bottle gourd (USVL1VR-Ls)	lsimeB281
MELO3C012486	Cp4.1LG01g09770	Cucurbita pepo (Zucchini)	cpemeB363
MELO3C012486	CsGy5G027170	Cucumber (Gy14) v2	cgybmeB319
MELO3C012486	Carg02004	Silver-seed gourd	carmeB0834
MELO3C012486	CsaV3_5G036890	Cucumber (Chinese Long) v3	cucmeB381

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C012486	Cucurbita moschata (Rifu)	cmomeB344
MELO3C012486	Cucurbita pepo (Zucchini)	cpemeB024
MELO3C012486	Silver-seed gourd	carmeB0719
MELO3C012486	Cucurbita maxima (Rimu)	cmameB351