MELO3C012454.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C012454.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Annexin
Location	chr10 : 370220 .. 371619 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACTTTTAACACCAAGAATTTTAGCAGCATTAACACAGCTTCAAAAGTAGTTGCCTCTCAATAGTCAAAATATAGCCTCACTGATAAAGATTTATATAAAATAAGGTTTTGCAAAACAAACTCATCACAAAGCCTAAAGCCTTCTCAACCAAACTAAATTTAATTAATTTGAAGCAAAGTTGGTTGTGGTTTTCACCTCTCTGCTTTGCAATGAGAACTGCTGGCATTTTTCTAGGCATTTTGCTGTCTTTTCTTTTGCTTGTGAACTTCTGCTATGCAGCAGAAGAAAGTGTTGCTGAATTTCAACCTGGCAAAGGTAATTTGCTTTTCTTTTTCTTTTTCTTTTTTTTTGCACATCTCCTTTTAATGAAAAATGGTTCTCTGCACACATCTTTTATATATATTTATATATAATATTTTAATTATATATGTCTTTTCGCATGGGTGCTTCGATATTCTAATACAAAGGAGAGATTTCAACCTTAAAAATTATCTAAATTAGTTGAGTTATGTTTAGGTTGACCATATTATATGATTTGCTTCATACTAATATACATATATATATATATTTTGACAAGACCTAGTGTGATGTAAAACGTTTTTGTTTATACAGGAGCAGCTGGTGTAACAGCTAAGAATGGAGAAGAAGAGCAAGAGGAGAAATTCAAGTTTCTTCATCACCACAAACCATACTACAAGAAACCATTTCTAAAGCCAATTCCATACAAACATCCATTTCTCAAGAAGCCAATCCCAGTTCACCCATTCCATAAAAAGCCAATTCCAGTTCACCCTTTTCTGAAGAAGCCAATTTCATTCAAGAAGAAGCCCATTCCAGTTCATCCATTCTTCAAGAAGCCAATTCACCCACCAGTCTTCCACACCCATCCTTGAAAAATCCCTTCTTCTTCCACTTTCATATGCTATATAAGAATGACAATGTTGTCTGTGACATAATGAAGTGAGAGTTTAATTTTATTTACCAAATAAAAAAAAAAAATTGAAGCCGTCAGTTCTATTATTTCTGTCATTTGTGTTAAGTATATTATTTGGATGAAGTTATTTTCAAATAAAGCTTTGTATTGTCTGTGTTGTTTCTGTTTAAACTGTCATTGTAAGTTTCAACTATGAAGTGCTTTTGTTTATTTACCAATGGAACAGTTAAGGCACTACTGAACTCCTCTTGGTTTTGATCTAAGAAATCCATGAGAAATAGCAGTGTTGAGTGATGCTATTGGTGAATATAGACATGATAAAGTAAGCCAAAAATCAAGAAAAGGCAAGTTTATGTTGAGTGATGTTATGAGTGAACTAAAATTGGACAAAACACTTTTAAATAATTAATATAATTAATCTTCCCCTTCCCTCTCAAAACAAAACACTTTTAAATAATTAAGCC

mRNA sequence

CAACTTTTAACACCAAGAATTTTAGCAGCATTAACACAGCTTCAAAAGTAGTTGCCTCTCAATAGTCAAAATATAGCCTCACTGATAAAGATTTATATAAAATAAGGTTTTGCAAAACAAACTCATCACAAAGCCTAAAGCCTTCTCAACCAAACTAAATTTAATTAATTTGAAGCAAAGTTGGTTGTGGTTTTCACCTCTCTGCTTTGCAATGAGAACTGCTGGCATTTTTCTAGGCATTTTGCTGTCTTTTCTTTTGCTTGTGAACTTCTGCTATGCAGCAGAAGAAAGTGTTGCTGAATTTCAACCTGGCAAAGGAGCAGCTGGTGTAACAGCTAAGAATGGAGAAGAAGAGCAAGAGGAGAAATTCAAGTTTCTTCATCACCACAAACCATACTACAAGAAACCATTTCTAAAGCCAATTCCATACAAACATCCATTTCTCAAGAAGCCAATCCCAGTTCACCCATTCCATAAAAAGCCAATTCCAGTTCACCCTTTTCTGAAGAAGCCAATTTCATTCAAGAAGAAGCCCATTCCAGTTCATCCATTCTTCAAGAAGCCAATTCACCCACCAGTCTTCCACACCCATCCTTGAAAAATCCCTTCTTCTTCCACTTTCATATGCTATATAAGAATGACAATGTTGTCTGTGACATAATGAAGTGAGAGTTTAATTTTATTTACCAAATAAAAAAAAAAAATTGAAGCCGTCAGTTCTATTATTTCTGTCATTTGTGTTAAGTATATTATTTGGATGAAGTTATTTTCAAATAAAGCTTTGTATTGTCTGTGTTGTTTCTGTTTAAACTGTCATTGTAAGTTTCAACTATGAAGTGCTTTTGTTTATTTACCAATGGAACAGTTAAGGCACTACTGAACTCCTCTTGGTTTTGATCTAAGAAATCCATGAGAAATAGCAGTGTTGAGTGATGCTATTGGTGAATATAGACATGATAAAGTAAGCCAAAAATCAAGAAAAGGCAAGTTTATGTTGAGTGATGTTATGAGTGAACTAAAATTGGACAAAACACTTTTAAATAATTAATATAATTAATCTTCCCCTTCCCTCTCAAAACAAAACACTTTTAAATAATTAAGCC

Coding sequence (CDS)

ATGAGAACTGCTGGCATTTTTCTAGGCATTTTGCTGTCTTTTCTTTTGCTTGTGAACTTCTGCTATGCAGCAGAAGAAAGTGTTGCTGAATTTCAACCTGGCAAAGGAGCAGCTGGTGTAACAGCTAAGAATGGAGAAGAAGAGCAAGAGGAGAAATTCAAGTTTCTTCATCACCACAAACCATACTACAAGAAACCATTTCTAAAGCCAATTCCATACAAACATCCATTTCTCAAGAAGCCAATCCCAGTTCACCCATTCCATAAAAAGCCAATTCCAGTTCACCCTTTTCTGAAGAAGCCAATTTCATTCAAGAAGAAGCCCATTCCAGTTCATCCATTCTTCAAGAAGCCAATTCACCCACCAGTCTTCCACACCCATCCTTGA

Protein sequence

MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHKPYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPISFKKKPIPVHPFFKKPIHPPVFHTHP

Homology

[Close]

BLAST of MELO3C012454.2 vs. NCBI nr
Match: ADN34202.1 (annexin [Cucumis melo subsp. melo])

HSP 1 Score: 148.7 bits (374), Expect = 1.4e-32
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 60
           MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK
Sbjct: 379 MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 438

Query: 61  PYYKKPFLKPIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXX 120
           PYYKKPFLKPIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXX
Sbjct: 439 PYYKKPFLKPIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXX 498

Query: 121 PPVFHTHP 129
           PPVFHTHP
Sbjct: 499 PPVFHTHP 506

[Close]

BLAST of MELO3C012454.2 vs. NCBI nr
Match: XP_008446928.1 (PREDICTED: proline-rich 33 kDa extensin-related protein-like [Cucumis melo])

HSP 1 Score: 148.7 bits (374), Expect = 1.4e-32
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 60
           MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK
Sbjct: 1   MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 60

Query: 61  PYYKKPFLKPIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXX 120
           PYYKKPFLKPIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXX
Sbjct: 61  PYYKKPFLKPIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXX 120

Query: 121 PPVFHTHP 129
           PPVFHTHP
Sbjct: 121 PPVFHTHP 128

[Close]

BLAST of MELO3C012454.2 vs. NCBI nr
Match: KGN52301.1 (ATP-dependent RNA helicase DBP7 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 2.1e-25
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 1  MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 60
          M+TA IFLGILLSFLLLVNFCYAAEESV EFQ GKGAAGVTAKNGEEE +EKFKFL HHK
Sbjct: 1  MKTACIFLGILLSFLLLVNFCYAAEESVTEFQSGKGAAGVTAKNGEEE-DEKFKFLLHHK 60

Query: 61 PYYKKPFLKPIP 73
          PYYKKPFLKPIP
Sbjct: 61 PYYKKPFLKPIP 71

[Close]

BLAST of MELO3C012454.2 vs. NCBI nr
Match: XP_011655905.1 (PREDICTED: LOW QUALITY PROTEIN: annexin D3 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 2.1e-25
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 1   MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 60
           M+TA IFLGILLSFLLLVNFCYAAEESV EFQ GKGAAGVTAKNGEEE +EKFKFL HHK
Sbjct: 389 MKTACIFLGILLSFLLLVNFCYAAEESVTEFQSGKGAAGVTAKNGEEE-DEKFKFLLHHK 448

Query: 61  PYYKKPFLKPIP 73
           PYYKKPFLKPIP
Sbjct: 449 PYYKKPFLKPIP 459

[Close]

BLAST of MELO3C012454.2 vs. NCBI nr
Match: XP_022138883.1 (uncharacterized protein LOC111009954 [Momordica charantia])

HSP 1 Score: 84.7 bits (208), Expect = 2.4e-13
Identity = 48/73 (65.75%), Postives = 57/73 (78.08%), Query Frame = 0


Query: 1   MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFL-HHH 60
           M+T  I LGILLS LLLVN C AAE++VAEFQPG+ A  +T KNGE  Q EKF+FL HH+
Sbjct: 31  MKTFFISLGILLSLLLLVNVCNAAEKNVAEFQPGQDADDIT-KNGEAVQGEKFRFLSHHN 90

Query: 61  KPYYKKPFLKPIP 73
           KP+YKKPF + IP
Sbjct: 91  KPHYKKPFFQQIP 102

[Close]

BLAST of MELO3C012454.2 vs. TrEMBL
Match: tr|A0A1S3BG81|A0A1S3BG81_CUCME (proline-rich 33 kDa extensin-related protein-like OS=Cucumis melo OX=3656 GN=LOC103489493 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 9.1e-33
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 60
           MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK
Sbjct: 1   MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 60

Query: 61  PYYKKPFLKPIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXX 120
           PYYKKPFLKPIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXX
Sbjct: 61  PYYKKPFLKPIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXX 120

Query: 121 PPVFHTHP 129
           PPVFHTHP
Sbjct: 121 PPVFHTHP 128

[Close]

BLAST of MELO3C012454.2 vs. TrEMBL
Match: tr|E5GCK5|E5GCK5_CUCME (Annexin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 9.1e-33
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 60
           MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK
Sbjct: 379 MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 438

Query: 61  PYYKKPFLKPIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXX 120
           PYYKKPFLKPIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXX
Sbjct: 439 PYYKKPFLKPIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXX 498

Query: 121 PPVFHTHP 129
           PPVFHTHP
Sbjct: 499 PPVFHTHP 506

[Close]

BLAST of MELO3C012454.2 vs. TrEMBL
Match: tr|A0A0A0KWW0|A0A0A0KWW0_CUCSA (ATP-dependent RNA helicase DBP7 OS=Cucumis sativus OX=3659 GN=Csa_5G623650 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-25
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 1  MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 60
          M+TA IFLGILLSFLLLVNFCYAAEESV EFQ GKGAAGVTAKNGEEE +EKFKFL HHK
Sbjct: 1  MKTACIFLGILLSFLLLVNFCYAAEESVTEFQSGKGAAGVTAKNGEEE-DEKFKFLLHHK 60

Query: 61 PYYKKPFLKPIP 73
          PYYKKPFLKPIP
Sbjct: 61 PYYKKPFLKPIP 71

[Close]

BLAST of MELO3C012454.2 vs. TrEMBL
Match: tr|A0A0A0KRM7|A0A0A0KRM7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623640 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.4e-10
Identity = 40/65 (61.54%), Postives = 47/65 (72.31%), Query Frame = 0


Query: 8  LGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHKPYYKKPF 67
          + I LS  LL+NFCYAAEE+   F P +G AG+T KNGEE +EEKFKFL  H P+YKKP 
Sbjct: 1  MAIFLSLFLLLNFCYAAEENEDAFLPAQG-AGIT-KNGEEAKEEKFKFLPDHIPFYKKPI 60

Query: 68 LKPIP 73
           K IP
Sbjct: 61 FKTIP 63

The following BLAST results are available for this feature:

BLAST of MELO3C012454.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34202.1	1.4e-32	100.00	annexin [Cucumis melo subsp. melo]	[more]
XP_008446928.1	1.4e-32	100.00	PREDICTED: proline-rich 33 kDa extensin-related protein-like [Cucumis melo]	[more]
KGN52301.1	2.1e-25	90.28	ATP-dependent RNA helicase DBP7 [Cucumis sativus]	[more]
XP_011655905.1	2.1e-25	90.28	PREDICTED: LOW QUALITY PROTEIN: annexin D3 [Cucumis sativus]	[more]
XP_022138883.1	2.4e-13	65.75	uncharacterized protein LOC111009954 [Momordica charantia]	[more]

BLAST of MELO3C012454.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C012454.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C012454.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BG81\|A0A1S3BG81_CUCME	9.1e-33	100.00	proline-rich 33 kDa extensin-related protein-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|E5GCK5\|E5GCK5_CUCME	9.1e-33	100.00	Annexin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
tr\|A0A0A0KWW0\|A0A0A0KWW0_CUCSA	1.4e-25	90.28	ATP-dependent RNA helicase DBP7 OS=Cucumis sativus OX=3659 GN=Csa_5G623650 PE=4 ...	[more]
tr\|A0A0A0KRM7\|A0A0A0KRM7_CUCSA	6.4e-10	61.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623640 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005544	calcium-dependent phospholipid binding
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0043167	ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012454.2.1	MELO3C012454.2.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C012454.2	Csa5G623640	Cucumber (Chinese Long) v2	cumedB359
MELO3C012454.2	CSPI05G27430	Wild cucumber (PI 183967)	cpimedB363
MELO3C012454.2	Cucsa.308120	Cucumber (Gy14) v1	cgymedB508
MELO3C012454.2	CmaCh04G013430	Cucurbita maxima (Rimu)	cmamedB726
MELO3C012454.2	CmoCh04G014180	Cucurbita moschata (Rifu)	cmomedB720
MELO3C012454.2	Lsi04G000420	Bottle gourd (USVL1VR-Ls)	lsimedB297
MELO3C012454.2	CsGy5G026830	Cucumber (Gy14) v2	cgybmedB318
MELO3C012454.2	Cla009951	Watermelon (97103) v1	medwmB062
MELO3C012454.2	ClCG05G026650	Watermelon (Charleston Gray)	medwcgB062
MELO3C012454.2	Cla97C05G102460	Watermelon (97103) v2	medwmbB056
MELO3C012454.2	Cla97C05G108920	Watermelon (97103) v2	medwmbB057
MELO3C012454.2	Bhi07G000763	Wax gourd	medwgoB081
MELO3C012454.2	Carg20679	Silver-seed gourd	carmedB0495
MELO3C012454.2	Carg01980	Silver-seed gourd	carmedB0846
MELO3C012454.2	CsaV3_5G036570	Cucumber (Chinese Long) v3	cucmedB375

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C012454.2	Cucurbita maxima (Rimu)	cmamedB408
MELO3C012454.2	Cucurbita moschata (Rifu)	cmomedB395
MELO3C012454.2	Cucurbita pepo (Zucchini)	cpemedB028
MELO3C012454.2	Cucurbita pepo (Zucchini)	cpemedB423