CsaV3_5G036570 (gene) Cucumber (Chinese Long) v3

NameCsaV3_5G036570
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionproline-rich 33 kDa extensin-related protein-like
Locationchr5 : 28796578 .. 28797940 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTAGAAAAGATATAGGTGGCAGCAGGAAATTGGATTAAATGATAATAAATCCTAAGCAGAATAAGCAGGTGAGATTACCAACTCTTAAACAAACCTTTAATTTAAAGGCCTTTGAGAGGTTAAAAAATCATGAATAATTTTAGCTACCTGTCTAGCACTCAAATTCACACCCTCCAAAGTAGCTATCAAAGTAAACACTTTGTGTCCATTCATAGCCACACTATAAAATGGGACAATAAGCCTTCTGAACCAATAAGCACTTCCAATTCAGAATTTGGCTCTCCCATCTTTTACCTCTCTACTTTTGGAATGAAGACTACTATTTCCATTTGTATGGCCATCTTTCTCTCCTTGTTTTTGCTTCTCAACTTCTGTTATGCAGCAGAAGAAAATGAAGATGCCTTTCTGCCTGCTCAAGGTATCTTCACTCGTTCCTTTTCTTCCTTTTTGGGTCATTTTCAACATGTGGGAGTTAAGTTACGCTTGTTTTGCACGACCTCTTTTGAAGGACATCGCAGTTTTGTTCTGTCATACTACACCTGTTAATTTGTACATAAAATTCTAATACAAGAGGTAAGGAAACAGTATGTAAGAGCATTTCCATATTTTCATTATGCAGGAGCTGGTATCACCAAAAATGGAGAAGAAGCCAAAGAAGAGAAATTCAAGTTTCTTCCCGACCACATACCATTCTACAAGAAGCCCATTTTCAAGACAATTCCTCGTCAACCAATCATCAAGAAGCCATTTCCTAAACCATATCGTCCACCAGTGCTCCCCAGCCATCCTTGAAAGTATGCTCAATCTTATAATGCAATGGAATAAAAACACATGTAGTAACCTTAAGCTTTATCGTAGTTTCATTTTAGAAGTTTATAAATGATCAGAAGGCTTCAAGCTGAGAGTCAAGAAGATCTATGAAGAAAACAATAATTTGTTTAGGGGGAAAATAAAAGAGAGAGTGAGCTCTCTATACTACTCATGCAATGTACTACTGTTATGTTCAAGGTGACGTGGTTGATCATGCAATGTAGGAATAGAACAAACTATGTTGAGTCCAGTGTGTATTTTGGTCCAAAATATATTCACATTACCTTCACTACAGATCCTGCGCATCTCCAATTTACACTTGCTTATGACAGCTTTTACTTGCCCCTTGTAACTGGAATTTAATCACAATTTGGGAGCCAATTGTAGAAGCACTTTTTTTTTTTTTTGTCTTGCGAAAGTAATGATCATTATAGACTTAAAATAACTGAATAAATGATTTTATATATTACAAAAAAGTAAAGAAAAGCTAAAGCAAAACAAGCTATCAATGACAACAAACTAAAAAGAAACTAAGAGAAAGTAACTTGTCAA

mRNA sequence

ATGAATAATTTTAGCTACCTGTCTAGCACTCAAATTCACACCCTCCAAAGTAGCTATCAAAGTAAACACTTTGTGTCCATTCATAGCCACACTATAAAATGGGACAATAAGCCTTCTGAACCAATAAGCACTTCCAATTCAGAATTTGGCTCTCCCATCTTTTACCTCTCTACTTTTGGAATGAAGACTACTATTTCCATTTGTATGGCCATCTTTCTCTCCTTGTTTTTGCTTCTCAACTTCTGTTATGCAGCAGAAGAAAATGAAGATGCCTTTCTGCCTGCTCAAGGAGCTGGTATCACCAAAAATGGAGAAGAAGCCAAAGAAGAGAAATTCAAGTTTCTTCCCGACCACATACCATTCTACAAGAAGCCCATTTTCAAGACAATTCCTCGTCAACCAATCATCAAGAAGCCATTTCCTAAACCATATCGTCCACCAGTGCTCCCCAGCCATCCTTGA

Coding sequence (CDS)

ATGAATAATTTTAGCTACCTGTCTAGCACTCAAATTCACACCCTCCAAAGTAGCTATCAAAGTAAACACTTTGTGTCCATTCATAGCCACACTATAAAATGGGACAATAAGCCTTCTGAACCAATAAGCACTTCCAATTCAGAATTTGGCTCTCCCATCTTTTACCTCTCTACTTTTGGAATGAAGACTACTATTTCCATTTGTATGGCCATCTTTCTCTCCTTGTTTTTGCTTCTCAACTTCTGTTATGCAGCAGAAGAAAATGAAGATGCCTTTCTGCCTGCTCAAGGAGCTGGTATCACCAAAAATGGAGAAGAAGCCAAAGAAGAGAAATTCAAGTTTCTTCCCGACCACATACCATTCTACAAGAAGCCCATTTTCAAGACAATTCCTCGTCAACCAATCATCAAGAAGCCATTTCCTAAACCATATCGTCCACCAGTGCTCCCCAGCCATCCTTGA

Protein sequence

MNNFSYLSSTQIHTLQSSYQSKHFVSIHSHTIKWDNKPSEPISTSNSEFGSPIFYLSTFGMKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYKKPIFKTIPRQPIIKKPFPKPYRPPVLPSHP
BLAST of CsaV3_5G036570 vs. NCBI nr
Match: XP_011655904.1 (PREDICTED: uncharacterized protein LOC101209862 [Cucumis sativus])

HSP 1 Score: 307.4 bits (786), Expect = 2.8e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0

Query: 1   MNNFSYLSSTQIHTLQSSYQSKHFVSIHSHTIKWDNKPSEPISTSNSEFGSPIFYLSTFG 60
           MNNFSYLSSTQIHTLQSSYQSKHFVSIHSHTIKWDNKPSEPISTSNSEFGSPIFYLSTFG
Sbjct: 1   MNNFSYLSSTQIHTLQSSYQSKHFVSIHSHTIKWDNKPSEPISTSNSEFGSPIFYLSTFG 60

Query: 61  MKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIP 120
           MKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIP
Sbjct: 61  MKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIP 120

Query: 121 FYKKPIFKTIPRQPIIKKPFPKPYRPPVLPSHP 154
           FYKKPIFKTIPRQPIIKKPFPKPYRPPVLPSHP
Sbjct: 121 FYKKPIFKTIPRQPIIKKPFPKPYRPPVLPSHP 153

BLAST of CsaV3_5G036570 vs. NCBI nr
Match: KGN52300.1 (hypothetical protein Csa_5G623640 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 3.7e-40
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0

Query: 69  MAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYKKPIFK 128
           MAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYKKPIFK
Sbjct: 1   MAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYKKPIFK 60

Query: 129 TIPRQPIIKKPFPKPYRPPVLPSHP 154
           TIPRQPIIKKPFPKPYRPPVLPSHP
Sbjct: 61  TIPRQPIIKKPFPKPYRPPVLPSHP 85

BLAST of CsaV3_5G036570 vs. NCBI nr
Match: XP_022138883.1 (uncharacterized protein LOC111009954 [Momordica charantia])

HSP 1 Score: 79.0 bits (193), Expect = 1.6e-11
Identity = 58/127 (45.67%), Postives = 71/127 (55.91%), Query Frame = 0

Query: 39  SEPISTSNSEFGSPIFYLSTFGMKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQGA 98
           S+PI+ + S        L +F MK T  I + I LSL LL+N C AAE+N   F P Q A
Sbjct: 9   SKPITKAFSAKALLKQILLSFSMK-TFFISLGILLSLLLLVNVCNAAEKNVAEFQPGQDA 68

Query: 99  -GITKNGEEAKEEKFKFLPDH-IPFYKKPIFKTIPRQPIIKKPFP----------KPYRP 154
             ITKNGE  + EKF+FL  H  P YKKP F+ IP  PI+KKP P           P+ P
Sbjct: 69  DDITKNGEAVQGEKFRFLSHHNKPHYKKPFFQQIP-HPIVKKPIPXXXXXXXXXXXPHFP 128

BLAST of CsaV3_5G036570 vs. NCBI nr
Match: ADN34202.1 (annexin [Cucumis melo subsp. melo])

HSP 1 Score: 78.2 bits (191), Expect = 2.8e-11
Identity = 44/75 (58.67%), Postives = 52/75 (69.33%), Query Frame = 0

Query: 59  FGMKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQG-AGIT-KNGEEAKEEKFKFLP 118
           F M+T   I + I LS  LL+NFCYAAEE+   F P +G AG+T KNGEE +EEKFKFL 
Sbjct: 377 FAMRTA-GIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLH 436

Query: 119 DHIPFYKKPIFKTIP 132
            H P+YKKP  K IP
Sbjct: 437 HHKPYYKKPFLKPIP 450

BLAST of CsaV3_5G036570 vs. NCBI nr
Match: XP_008446928.1 (PREDICTED: proline-rich 33 kDa extensin-related protein-like [Cucumis melo])

HSP 1 Score: 77.0 bits (188), Expect = 6.1e-11
Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = 0

Query: 64  TISICMAIFLSLFLLLNFCYAAEENEDAFLPAQG-AGIT-KNGEEAKEEKFKFLPDHIPF 123
           T  I + I LS  LL+NFCYAAEE+   F P +G AG+T KNGEE +EEKFKFL  H P+
Sbjct: 3   TAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHKPY 62

Query: 124 YKKPIFKTIP 132
           YKKP  K IP
Sbjct: 63  YKKPFLKPIP 72

BLAST of CsaV3_5G036570 vs. TrEMBL
Match: tr|A0A0A0KRM7|A0A0A0KRM7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623640 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.4e-40
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0

Query: 69  MAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYKKPIFK 128
           MAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYKKPIFK
Sbjct: 1   MAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYKKPIFK 60

Query: 129 TIPRQPIIKKPFPKPYRPPVLPSHP 154
           TIPRQPIIKKPFPKPYRPPVLPSHP
Sbjct: 61  TIPRQPIIKKPFPKPYRPPVLPSHP 85

BLAST of CsaV3_5G036570 vs. TrEMBL
Match: tr|E5GCK5|E5GCK5_CUCME (Annexin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.8e-11
Identity = 44/75 (58.67%), Postives = 52/75 (69.33%), Query Frame = 0

Query: 59  FGMKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQG-AGIT-KNGEEAKEEKFKFLP 118
           F M+T   I + I LS  LL+NFCYAAEE+   F P +G AG+T KNGEE +EEKFKFL 
Sbjct: 377 FAMRTA-GIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLH 436

Query: 119 DHIPFYKKPIFKTIP 132
            H P+YKKP  K IP
Sbjct: 437 HHKPYYKKPFLKPIP 450

BLAST of CsaV3_5G036570 vs. TrEMBL
Match: tr|A0A1S3BG81|A0A1S3BG81_CUCME (proline-rich 33 kDa extensin-related protein-like OS=Cucumis melo OX=3656 GN=LOC103489493 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 4.1e-11
Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = 0

Query: 64  TISICMAIFLSLFLLLNFCYAAEENEDAFLPAQG-AGIT-KNGEEAKEEKFKFLPDHIPF 123
           T  I + I LS  LL+NFCYAAEE+   F P +G AG+T KNGEE +EEKFKFL  H P+
Sbjct: 3   TAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHKPY 62

Query: 124 YKKPIFKTIP 132
           YKKP  K IP
Sbjct: 63  YKKPFLKPIP 72

BLAST of CsaV3_5G036570 vs. TrEMBL
Match: tr|A0A0A0KWW0|A0A0A0KWW0_CUCSA (ATP-dependent RNA helicase DBP7 OS=Cucumis sativus OX=3659 GN=Csa_5G623650 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.5e-08
Identity = 40/70 (57.14%), Postives = 48/70 (68.57%), Query Frame = 0

Query: 64  TISICMAIFLSLFLLLNFCYAAEENEDAFLPAQG-AGIT-KNGEEAKEEKFKFLPDHIPF 123
           T  I + I LS  LL+NFCYAAEE+   F   +G AG+T KNGEE ++EKFKFL  H P+
Sbjct: 3   TACIFLGILLSFLLLVNFCYAAEESVTEFQSGKGAAGVTAKNGEE-EDEKFKFLLHHKPY 62

Query: 124 YKKPIFKTIP 132
           YKKP  K IP
Sbjct: 63  YKKPFLKPIP 71

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011655904.12.8e-80100.00PREDICTED: uncharacterized protein LOC101209862 [Cucumis sativus][more]
KGN52300.13.7e-40100.00hypothetical protein Csa_5G623640 [Cucumis sativus][more]
XP_022138883.11.6e-1145.67uncharacterized protein LOC111009954 [Momordica charantia][more]
ADN34202.12.8e-1158.67annexin [Cucumis melo subsp. melo][more]
XP_008446928.16.1e-1160.00PREDICTED: proline-rich 33 kDa extensin-related protein-like [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KRM7|A0A0A0KRM7_CUCSA2.4e-40100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623640 PE=4 SV=1[more]
tr|E5GCK5|E5GCK5_CUCME1.8e-1158.67Annexin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
tr|A0A1S3BG81|A0A1S3BG81_CUCME4.1e-1160.00proline-rich 33 kDa extensin-related protein-like OS=Cucumis melo OX=3656 GN=LOC... [more]
tr|A0A0A0KWW0|A0A0A0KWW0_CUCSA2.5e-0857.14ATP-dependent RNA helicase DBP7 OS=Cucumis sativus OX=3659 GN=Csa_5G623650 PE=4 ... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005544 calcium-dependent phospholipid binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0004386 helicase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G036570.1CsaV3_5G036570.1mRNA