CsaV3_5G036570 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTAGAAAAGATATAGGTGGCAGCAGGAAATTGGATTAAATGATAATAAATCCTAAGCAGAATAAGCAGGTGAGATTACCAACTCTTAAACAAACCTTTAATTTAAAGGCCTTTGAGAGGTTAAAAAATCATGAATAATTTTAGCTACCTGTCTAGCACTCAAATTCACACCCTCCAAAGTAGCTATCAAAGTAAACACTTTGTGTCCATTCATAGCCACACTATAAAATGGGACAATAAGCCTTCTGAACCAATAAGCACTTCCAATTCAGAATTTGGCTCTCCCATCTTTTACCTCTCTACTTTTGGAATGAAGACTACTATTTCCATTTGTATGGCCATCTTTCTCTCCTTGTTTTTGCTTCTCAACTTCTGTTATGCAGCAGAAGAAAATGAAGATGCCTTTCTGCCTGCTCAAGGTATCTTCACTCGTTCCTTTTCTTCCTTTTTGGGTCATTTTCAACATGTGGGAGTTAAGTTACGCTTGTTTTGCACGACCTCTTTTGAAGGACATCGCAGTTTTGTTCTGTCATACTACACCTGTTAATTTGTACATAAAATTCTAATACAAGAGGTAAGGAAACAGTATGTAAGAGCATTTCCATATTTTCATTATGCAGGAGCTGGTATCACCAAAAATGGAGAAGAAGCCAAAGAAGAGAAATTCAAGTTTCTTCCCGACCACATACCATTCTACAAGAAGCCCATTTTCAAGACAATTCCTCGTCAACCAATCATCAAGAAGCCATTTCCTAAACCATATCGTCCACCAGTGCTCCCCAGCCATCCTTGAAAGTATGCTCAATCTTATAATGCAATGGAATAAAAACACATGTAGTAACCTTAAGCTTTATCGTAGTTTCATTTTAGAAGTTTATAAATGATCAGAAGGCTTCAAGCTGAGAGTCAAGAAGATCTATGAAGAAAACAATAATTTGTTTAGGGGGAAAATAAAAGAGAGAGTGAGCTCTCTATACTACTCATGCAATGTACTACTGTTATGTTCAAGGTGACGTGGTTGATCATGCAATGTAGGAATAGAACAAACTATGTTGAGTCCAGTGTGTATTTTGGTCCAAAATATATTCACATTACCTTCACTACAGATCCTGCGCATCTCCAATTTACACTTGCTTATGACAGCTTTTACTTGCCCCTTGTAACTGGAATTTAATCACAATTTGGGAGCCAATTGTAGAAGCACTTTTTTTTTTTTTTGTCTTGCGAAAGTAATGATCATTATAGACTTAAAATAACTGAATAAATGATTTTATATATTACAAAAAAGTAAAGAAAAGCTAAAGCAAAACAAGCTATCAATGACAACAAACTAAAAAGAAACTAAGAGAAAGTAACTTGTCAA ATGAATAATTTTAGCTACCTGTCTAGCACTCAAATTCACACCCTCCAAAGTAGCTATCAAAGTAAACACTTTGTGTCCATTCATAGCCACACTATAAAATGGGACAATAAGCCTTCTGAACCAATAAGCACTTCCAATTCAGAATTTGGCTCTCCCATCTTTTACCTCTCTACTTTTGGAATGAAGACTACTATTTCCATTTGTATGGCCATCTTTCTCTCCTTGTTTTTGCTTCTCAACTTCTGTTATGCAGCAGAAGAAAATGAAGATGCCTTTCTGCCTGCTCAAGGAGCTGGTATCACCAAAAATGGAGAAGAAGCCAAAGAAGAGAAATTCAAGTTTCTTCCCGACCACATACCATTCTACAAGAAGCCCATTTTCAAGACAATTCCTCGTCAACCAATCATCAAGAAGCCATTTCCTAAACCATATCGTCCACCAGTGCTCCCCAGCCATCCTTGA ATGAATAATTTTAGCTACCTGTCTAGCACTCAAATTCACACCCTCCAAAGTAGCTATCAAAGTAAACACTTTGTGTCCATTCATAGCCACACTATAAAATGGGACAATAAGCCTTCTGAACCAATAAGCACTTCCAATTCAGAATTTGGCTCTCCCATCTTTTACCTCTCTACTTTTGGAATGAAGACTACTATTTCCATTTGTATGGCCATCTTTCTCTCCTTGTTTTTGCTTCTCAACTTCTGTTATGCAGCAGAAGAAAATGAAGATGCCTTTCTGCCTGCTCAAGGAGCTGGTATCACCAAAAATGGAGAAGAAGCCAAAGAAGAGAAATTCAAGTTTCTTCCCGACCACATACCATTCTACAAGAAGCCCATTTTCAAGACAATTCCTCGTCAACCAATCATCAAGAAGCCATTTCCTAAACCATATCGTCCACCAGTGCTCCCCAGCCATCCTTGA MNNFSYLSSTQIHTLQSSYQSKHFVSIHSHTIKWDNKPSEPISTSNSEFGSPIFYLSTFGMKTTISICMAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYKKPIFKTIPRQPIIKKPFPKPYRPPVLPSHP
BLAST of CsaV3_5G036570 vs. NCBI nr
Match: XP_011655904.1 (PREDICTED: uncharacterized protein LOC101209862 [Cucumis sativus]) HSP 1 Score: 307.4 bits (786), Expect = 2.8e-80 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of CsaV3_5G036570 vs. NCBI nr
Match: KGN52300.1 (hypothetical protein Csa_5G623640 [Cucumis sativus]) HSP 1 Score: 174.1 bits (440), Expect = 3.7e-40 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsaV3_5G036570 vs. NCBI nr
Match: XP_022138883.1 (uncharacterized protein LOC111009954 [Momordica charantia]) HSP 1 Score: 79.0 bits (193), Expect = 1.6e-11 Identity = 58/127 (45.67%), Postives = 71/127 (55.91%), Query Frame = 0
BLAST of CsaV3_5G036570 vs. NCBI nr
Match: ADN34202.1 (annexin [Cucumis melo subsp. melo]) HSP 1 Score: 78.2 bits (191), Expect = 2.8e-11 Identity = 44/75 (58.67%), Postives = 52/75 (69.33%), Query Frame = 0
BLAST of CsaV3_5G036570 vs. NCBI nr
Match: XP_008446928.1 (PREDICTED: proline-rich 33 kDa extensin-related protein-like [Cucumis melo]) HSP 1 Score: 77.0 bits (188), Expect = 6.1e-11 Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of CsaV3_5G036570 vs. TrEMBL
Match: tr|A0A0A0KRM7|A0A0A0KRM7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623640 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.4e-40 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsaV3_5G036570 vs. TrEMBL
Match: tr|E5GCK5|E5GCK5_CUCME (Annexin OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.8e-11 Identity = 44/75 (58.67%), Postives = 52/75 (69.33%), Query Frame = 0
BLAST of CsaV3_5G036570 vs. TrEMBL
Match: tr|A0A1S3BG81|A0A1S3BG81_CUCME (proline-rich 33 kDa extensin-related protein-like OS=Cucumis melo OX=3656 GN=LOC103489493 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 4.1e-11 Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of CsaV3_5G036570 vs. TrEMBL
Match: tr|A0A0A0KWW0|A0A0A0KWW0_CUCSA (ATP-dependent RNA helicase DBP7 OS=Cucumis sativus OX=3659 GN=Csa_5G623650 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.5e-08 Identity = 40/70 (57.14%), Postives = 48/70 (68.57%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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