Cla009951 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla009951
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Annexin (AHRD V1 ***- E5GCK5_CUCME)
Location	Chr5 : 33285839 .. 33286418 (-)

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Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCTGCTGTCATTTTTCTAGGCATTTTGCTGTCTTTGCTTTTGCTTGTGAACTTCTGCTATGCGGCAGAAGAAAGTGTTGATGAATTTCAGTCTGGGAAAGGTACTCCTTTTTTCTTTTTTTTTTTTGGCACTTTGAGGTTCTTCAATCTTTGCTTGTTTTGCACCACTCCTTTTAATGAAAATTGTACTTCTCTTCACATATTATAATATATATATATGTATACACCTTTTTTTTTTTTTTGTCTAGATAAAATTTGTTAGTGAAGGGCATTTTGTTTATACAGATGCAGCTGGTGTAACAGGTAAGAATGGAGATGAAGAGCAAGAAGAGAAATTCAAGTTTCTTCATCACCACAAGCCATACTTCAAGAAACCATTTCTAAAGCCAATTCCATACAAGCATCCTTTTCTGAAGAAGCCAATTCCAGTTCATCCATTTCTCAAGAAACCAATTCCAGTTCACCCATTTCTTAAGAAACCAATTCCAGTTCACCCATTTCTCAAGAAGCCAATTCCAGTTCATCCATTCCTTAAGAAGCCAATTAATCCACCAGTCTTCCACACCCATCCTTGA

mRNA sequence

ATGAAACCTGCTGTCATTTTTCTAGGCATTTTGCTGTCTTTGCTTTTGCTTGTGAACTTCTGCTATGCGGCAGAAGAAAGTGTTGATGAATTTCAGTCTGGGAAAGATGCAGCTGGTGTAACAGGTAAGAATGGAGATGAAGAGCAAGAAGAGAAATTCAAGTTTCTTCATCACCACAAGCCATACTTCAAGAAACCATTTCTAAAGCCAATTCCATACAAGCATCCTTTTCTGAAGAAGCCAATTCCAGTTCATCCATTTCTCAAGAAACCAATTCCAGTTCACCCATTTCTTAAGAAACCAATTCCAGTTCACCCATTTCTCAAGAAGCCAATTCCAGTTCATCCATTCCTTAAGAAGCCAATTAATCCACCAGTCTTCCACACCCATCCTTGA

Coding sequence (CDS)

ATGAAACCTGCTGTCATTTTTCTAGGCATTTTGCTGTCTTTGCTTTTGCTTGTGAACTTCTGCTATGCGGCAGAAGAAAGTGTTGATGAATTTCAGTCTGGGAAAGATGCAGCTGGTGTAACAGGTAAGAATGGAGATGAAGAGCAAGAAGAGAAATTCAAGTTTCTTCATCACCACAAGCCATACTTCAAGAAACCATTTCTAAAGCCAATTCCATACAAGCATCCTTTTCTGAAGAAGCCAATTCCAGTTCATCCATTTCTCAAGAAACCAATTCCAGTTCACCCATTTCTTAAGAAACCAATTCCAGTTCACCCATTTCTCAAGAAGCCAATTCCAGTTCATCCATTCCTTAAGAAGCCAATTAATCCACCAGTCTTCCACACCCATCCTTGA

Protein sequence

MKPAVIFLGILLSLLLLVNFCYAAEESVDEFQSGKDAAGVTGKNGDEEQEEKFKFLHHHKPYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPINPPVFHTHP

Homology

[Close]

BLAST of Cla009951 vs. TrEMBL
Match: E5GCK5_CUCME (Annexin OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 6.3e-60
Identity = 113/131 (86.26%), Postives = 117/131 (89.31%), Query Frame = 1


Query: 1   MKPAVIFLGILLSLLLLVNFCYAAEESVDEFQSGKDAAGVTGKNGDEEQEEKFKFLHHHK 60
           M+ A IFLGILLS LLLVNFCYAAEESV EFQ GK AAGVT KNG+EEQEEKFKFLHHHK
Sbjct: 379 MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 438

Query: 61  PYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKK 120
           PY+KKPFLKPIPYKHPFLKKPIPVHPF KKPIPVHPFLKKPI    F KKPIPVHPF KK
Sbjct: 439 PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPI---SFKKKPIPVHPFFKK 498

Query: 121 PINPPVFHTHP 132
           PI+PPVFHTHP
Sbjct: 499 PIHPPVFHTHP 506

[Close]

BLAST of Cla009951 vs. TrEMBL
Match: A0A0A0KWW0_CUCSA (ATP-dependent RNA helicase DBP7 OS=Cucumis sativus GN=Csa_5G623650 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.3e-48
Identity = 101/131 (77.10%), Postives = 106/131 (80.92%), Query Frame = 1


Query: 1   MKPAVIFLGILLSLLLLVNFCYAAEESVDEFQSGKDAAGVTGKNGDEEQEEKFKFLHHHK 60
           MK A IFLGILLS LLLVNFCYAAEESV EFQSGK AAGVT KNG+EE +EKFKFL HHK
Sbjct: 1   MKTACIFLGILLSFLLLVNFCYAAEESVTEFQSGKGAAGVTAKNGEEE-DEKFKFLLHHK 60

Query: 61  PYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKK 120
           PY+KKPFLKPIPYKHPFLKKPIPVHPF KKPI    F KKP+PVHPF KKPI        
Sbjct: 61  PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPI---VFEKKPLPVHPFFKKPID------- 118

Query: 121 PINPPVFHTHP 132
             +PPVFHTHP
Sbjct: 121 --HPPVFHTHP 118

[Close]

BLAST of Cla009951 vs. TrEMBL
Match: A0A0A0KRM7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623640 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.2e-15
Identity = 47/89 (52.81%), Postives = 60/89 (67.42%), Query Frame = 1


Query: 8  LGILLSLLLLVNFCYAAEESVDEFQSGKDAAGVTGKNGDEEQEEKFKFLHHHKPYFKKPF 67
          + I LSL LL+NFCYAAEE+ D F   +  AG+T KNG+E +EEKFKFL  H P++KKP 
Sbjct: 1  MAIFLSLFLLLNFCYAAEENEDAFLPAQ-GAGIT-KNGEEAKEEKFKFLPDHIPFYKKPI 60

Query: 68 LKPIPYKHPFLKKPIPVHPFLKKPIPVHP 97
           K IP + P +KKP P  P+    +P HP
Sbjct: 61 FKTIP-RQPIIKKPFP-KPYRPPVLPSHP 85

[Close]

BLAST of Cla009951 vs. TrEMBL
Match: V7CQW8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G229200g PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-12
Identity = 39/79 (49.37%), Postives = 50/79 (63.29%), Query Frame = 1


Query: 57  HHHKPY--FKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPV 116
           HHH P      P   P+   HP LK P+P+HP L  P+PVHP +K P+PVHP +K P+PV
Sbjct: 72  HHHHPSAPVHPPLNPPLVPVHPPLKPPVPIHPPLNPPVPVHPPVKPPVPVHPPVKPPVPV 131

Query: 117 HPFLKK--PINPPVFHTHP 132
           HP +K   P++PPV   HP
Sbjct: 132 HPPVKPPVPVHPPV-PVHP 149

[Close]

BLAST of Cla009951 vs. TrEMBL
Match: Q41122_PHAVU (Proline-rich protein OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-12
Identity = 39/79 (49.37%), Postives = 50/79 (63.29%), Query Frame = 1


Query: 57  HHHKPY--FKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPV 116
           HHH P      P   P+   HP LK P+P+HP L  P+PVHP +K P+PVHP +K P+PV
Sbjct: 83  HHHHPSAPVHPPLNPPLVPVHPPLKPPVPIHPPLNPPVPVHPPVKPPVPVHPPVKPPVPV 142

Query: 117 HPFLKK--PINPPVFHTHP 132
           HP +K   P++PPV   HP
Sbjct: 143 HPPVKPPVPVHPPV-PVHP 160

[Close]

BLAST of Cla009951 vs. NCBI nr
Match: gi|659092159|ref|XP_008446928.1| (PREDICTED: uncharacterized protein LOC103489493 [Cucumis melo])

HSP 1 Score: 238.0 bits (606), Expect = 9.1e-60
Identity = 113/131 (86.26%), Postives = 117/131 (89.31%), Query Frame = 1


Query: 1   MKPAVIFLGILLSLLLLVNFCYAAEESVDEFQSGKDAAGVTGKNGDEEQEEKFKFLHHHK 60
           M+ A IFLGILLS LLLVNFCYAAEESV EFQ GK AAGVT KNG+EEQEEKFKFLHHHK
Sbjct: 1   MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 60

Query: 61  PYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKK 120
           PY+KKPFLKPIPYKHPFLKKPIPVHPF KKPIPVHPFLKKPI    F KKPIPVHPF KK
Sbjct: 61  PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPI---SFKKKPIPVHPFFKK 120

Query: 121 PINPPVFHTHP 132
           PI+PPVFHTHP
Sbjct: 121 PIHPPVFHTHP 128

[Close]

BLAST of Cla009951 vs. NCBI nr
Match: gi|307136392|gb|ADN34202.1| (annexin [Cucumis melo subsp. melo])

HSP 1 Score: 238.0 bits (606), Expect = 9.1e-60
Identity = 113/131 (86.26%), Postives = 117/131 (89.31%), Query Frame = 1


Query: 1   MKPAVIFLGILLSLLLLVNFCYAAEESVDEFQSGKDAAGVTGKNGDEEQEEKFKFLHHHK 60
           M+ A IFLGILLS LLLVNFCYAAEESV EFQ GK AAGVT KNG+EEQEEKFKFLHHHK
Sbjct: 379 MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 438

Query: 61  PYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKK 120
           PY+KKPFLKPIPYKHPFLKKPIPVHPF KKPIPVHPFLKKPI    F KKPIPVHPF KK
Sbjct: 439 PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPI---SFKKKPIPVHPFFKK 498

Query: 121 PINPPVFHTHP 132
           PI+PPVFHTHP
Sbjct: 499 PIHPPVFHTHP 506

[Close]

BLAST of Cla009951 vs. NCBI nr
Match: gi|700197124|gb|KGN52301.1| (ATP-dependent RNA helicase DBP7 [Cucumis sativus])

HSP 1 Score: 198.7 bits (504), Expect = 6.1e-48
Identity = 101/131 (77.10%), Postives = 106/131 (80.92%), Query Frame = 1


Query: 1   MKPAVIFLGILLSLLLLVNFCYAAEESVDEFQSGKDAAGVTGKNGDEEQEEKFKFLHHHK 60
           MK A IFLGILLS LLLVNFCYAAEESV EFQSGK AAGVT KNG+EE +EKFKFL HHK
Sbjct: 1   MKTACIFLGILLSFLLLVNFCYAAEESVTEFQSGKGAAGVTAKNGEEE-DEKFKFLLHHK 60

Query: 61  PYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKK 120
           PY+KKPFLKPIPYKHPFLKKPIPVHPF KKPI    F KKP+PVHPF KKPI        
Sbjct: 61  PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPI---VFEKKPLPVHPFFKKPID------- 118

Query: 121 PINPPVFHTHP 132
             +PPVFHTHP
Sbjct: 121 --HPPVFHTHP 118

[Close]

BLAST of Cla009951 vs. NCBI nr
Match: gi|778706736|ref|XP_011655905.1| (PREDICTED: LOW QUALITY PROTEIN: annexin D3 [Cucumis sativus])

HSP 1 Score: 198.7 bits (504), Expect = 6.1e-48
Identity = 101/131 (77.10%), Postives = 106/131 (80.92%), Query Frame = 1


Query: 1   MKPAVIFLGILLSLLLLVNFCYAAEESVDEFQSGKDAAGVTGKNGDEEQEEKFKFLHHHK 60
           MK A IFLGILLS LLLVNFCYAAEESV EFQSGK AAGVT KNG+EE +EKFKFL HHK
Sbjct: 389 MKTACIFLGILLSFLLLVNFCYAAEESVTEFQSGKGAAGVTAKNGEEE-DEKFKFLLHHK 448

Query: 61  PYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKK 120
           PY+KKPFLKPIPYKHPFLKKPIPVHPF KKPI    F KKP+PVHPF KKPI        
Sbjct: 449 PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPI---VFEKKPLPVHPFFKKPID------- 506

Query: 121 PINPPVFHTHP 132
             +PPVFHTHP
Sbjct: 509 --HPPVFHTHP 506

[Close]

BLAST of Cla009951 vs. NCBI nr
Match: gi|920707259|gb|KOM49256.1| (hypothetical protein LR48_Vigan08g008300 [Vigna angularis])

HSP 1 Score: 93.6 bits (231), Expect = 2.8e-16
Identity = 55/134 (41.04%), Postives = 70/134 (52.24%), Query Frame = 1


Query: 8   LGILLSLLLLVNFCYAAEESVDEFQSGKDAAGVTGKNGDEE----------QEEKFKFLH 67
           L  +L   L++ FCYA   +     SG +     GK   EE          +EEKF F H
Sbjct: 7   LNAILRFGLVITFCYAVAAAATTEVSGTEV-NTNGKLESEELTKTTLNENYEEEKF-FFH 66

Query: 68  HHKPYFKKPFLKPIPYKHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPFLKKPIPVHPF 127
           HHKP FKKPF KP+P   PF+ KPIPV+    KP+PV  +  KP+PV  F   P PV  +
Sbjct: 67  HHKPLFKKPFFKPVPKPIPFV-KPIPVYKPYPKPVPVPVYKPKPVPVPVFKPHPKPVPVY 126

Query: 128 LKKPINPPVFHTHP 132
             KP+  PV+   P
Sbjct: 127 KPKPVPVPVYKPKP 137

The following BLAST results are available for this feature:

BLAST of Cla009951 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GCK5_CUCME	6.3e-60	86.26	Annexin OS=Cucumis melo subsp. melo PE=3 SV=1	[more]
A0A0A0KWW0_CUCSA	4.3e-48	77.10	ATP-dependent RNA helicase DBP7 OS=Cucumis sativus GN=Csa_5G623650 PE=4 SV=1	[more]
A0A0A0KRM7_CUCSA	6.2e-15	52.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623640 PE=4 SV=1	[more]
V7CQW8_PHAVU	1.3e-12	49.37	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G229200g PE=4 SV=1	[more]
Q41122_PHAVU	1.3e-12	49.37	Proline-rich protein OS=Phaseolus vulgaris PE=2 SV=1	[more]

BLAST of Cla009951 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659092159\|ref\|XP_008446928.1\|	9.1e-60	86.26	PREDICTED: uncharacterized protein LOC103489493 [Cucumis melo]	[more]
gi\|307136392\|gb\|ADN34202.1\|	9.1e-60	86.26	annexin [Cucumis melo subsp. melo]	[more]
gi\|700197124\|gb\|KGN52301.1\|	6.1e-48	77.10	ATP-dependent RNA helicase DBP7 [Cucumis sativus]	[more]
gi\|778706736\|ref\|XP_011655905.1\|	6.1e-48	77.10	PREDICTED: LOW QUALITY PROTEIN: annexin D3 [Cucumis sativus]	[more]
gi\|920707259\|gb\|KOM49256.1\|	2.8e-16	41.04	hypothetical protein LR48_Vigan08g008300 [Vigna angularis]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005544	calcium-dependent phospholipid binding
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0043167	ion binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU06450	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU36218	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU44381	watermelon EST collection version 2.0	transcribed_cluster
WMU49215	watermelon EST collection version 2.0	transcribed_cluster
WMU54128	watermelon EST collection version 2.0	transcribed_cluster
WMU76281	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla009951	Cla009951.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU54128	WMU54128	transcribed_cluster
WMU36218	WMU36218	transcribed_cluster
WMU06450	WMU06450	transcribed_cluster
WMU44381	WMU44381	transcribed_cluster
WMU76281	WMU76281	transcribed_cluster
WMU49215	WMU49215	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla009951	Cla97C05G108920	Watermelon (97103) v2	wmwmbB207
Cla009951	Csa5G623640	Cucumber (Chinese Long) v2	cuwmB396
Cla009951	MELO3C012454	Melon (DHL92) v3.5.1	mewmB062
Cla009951	ClCG05G026650	Watermelon (Charleston Gray)	wcgwmB285
Cla009951	CSPI05G27430	Wild cucumber (PI 183967)	cpiwmB404
Cla009951	Cucsa.308120	Cucumber (Gy14) v1	cgywmB560
Cla009951	CmaCh04G013430	Cucurbita maxima (Rimu)	cmawmB705
Cla009951	CmoCh04G014180	Cucurbita moschata (Rifu)	cmowmB701
Cla009951	Lsi04G000420	Bottle gourd (USVL1VR-Ls)	lsiwmB320
Cla009951	CsGy5G026830	Cucumber (Gy14) v2	cgybwmB371
Cla009951	MELO3C012454.2	Melon (DHL92) v3.6.1	medwmB062
Cla009951	Carg01980	Silver-seed gourd	carwmB0840
Cla009951	CsaV3_5G036570	Cucumber (Chinese Long) v3	cucwmB422

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None