ClCG05G020720 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G020720
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Annexin
Location	CG_Chr05 : 32771630 .. 32772257 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCATAAAAACCTTCTAAACCAAAAGCACTTTTGAATCAAAATTTGGCTCTGCCTTCTTTTACCTCTCTCCTTTTGCAATGAAGACTCTTTCCATTTGTGTGCCCATCCTCCTCTCTTTGTTTTTGCTTGCCAACTTCTGCTATGCAGCAGAAGAAAATAAGGTTGCCATTCTGCCTACCCAAGGTATCTTCACTAATTCTTTTTCTTCTTTTTGGGTCACTTTCAACATATGAGAGTTTAGTTATACTCATGTTAGCATTTGGTGCTTATTTTTCAAACGCTTTTAAAGGATATCACAGTTCCGTTTTTCCATGCTACACCTGTTAATTTGTACATATAATTCTAGTACAAGAGCAAAGGAAACAGTATCTAAGAGCGTTTCCATATTTTCATTATGCAGGTGCTGATATGACTGAAAATGGAGAAGAAGCTAAAGAAGAGAAATTCAAGTTTCTTCCTCACCACATACCATTCTACAAGAAGCCCTTTTTCAAGCCAATTCCTCATCACCCAGTGCTCAAGAAGCCATTTCCAAAACCACATTATCCACCAGTCTTCCCCAGCCATCCTTGAAAGTATTCTCAATCTTATTAAGCCATGGAATAAGAACACATGTAGTAACCTTAA

mRNA sequence

ACCATAAAAACCTTCTAAACCAAAAGCACTTTTGAATCAAAATTTGGCTCTGCCTTCTTTTACCTCTCTCCTTTTGCAATGAAGACTCTTTCCATTTGTGTGCCCATCCTCCTCTCTTTGTTTTTGCTTGCCAACTTCTGCTATGCAGCAGAAGAAAATAAGGTTGCCATTCTGCCTACCCAAGGTGCTGATATGACTGAAAATGGAGAAGAAGCTAAAGAAGAGAAATTCAAGTTTCTTCCTCACCACATACCATTCTACAAGAAGCCCTTTTTCAAGCCAATTCCTCATCACCCAGTGCTCAAGAAGCCATTTCCAAAACCACATTATCCACCAGTCTTCCCCAGCCATCCTTGAAAGTATTCTCAATCTTATTAAGCCATGGAATAAGAACACATGTAGTAACCTTAA

Coding sequence (CDS)

ATGAAGACTCTTTCCATTTGTGTGCCCATCCTCCTCTCTTTGTTTTTGCTTGCCAACTTCTGCTATGCAGCAGAAGAAAATAAGGTTGCCATTCTGCCTACCCAAGGTGCTGATATGACTGAAAATGGAGAAGAAGCTAAAGAAGAGAAATTCAAGTTTCTTCCTCACCACATACCATTCTACAAGAAGCCCTTTTTCAAGCCAATTCCTCATCACCCAGTGCTCAAGAAGCCATTTCCAAAACCACATTATCCACCAGTCTTCCCCAGCCATCCTTGA

Protein sequence

MKTLSICVPILLSLFLLANFCYAAEENKVAILPTQGADMTENGEEAKEEKFKFLPHHIPFYKKPFFKPIPHHPVLKKPFPKPHYPPVFPSHP

Homology

[Close]

BLAST of ClCG05G020720 vs. TrEMBL
Match: A0A0A0KRM7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623640 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 4.3e-31
Identity = 64/83 (77.11%), Postives = 70/83 (84.34%), Query Frame = 1


Query: 10 ILLSLFLLANFCYAAEENKVAILPTQGADMTENGEEAKEEKFKFLPHHIPFYKKPFFKPI 69
          I LSLFLL NFCYAAEEN+ A LP QGA +T+NGEEAKEEKFKFLP HIPFYKKP FK I
Sbjct: 3  IFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYKKPIFKTI 62

Query: 70 PHHPVLKKPFPKPHYPPVFPSHP 93
          P  P++KKPFPKP+ PPV PSHP
Sbjct: 63 PRQPIIKKPFPKPYRPPVLPSHP 85

[Close]

BLAST of ClCG05G020720 vs. TrEMBL
Match: E5GCK5_CUCME (Annexin OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.9e-19
Identity = 54/96 (56.25%), Postives = 63/96 (65.62%), Query Frame = 1


Query: 1   MKTLSICVPILLSLFLLANFCYAAEENKVAILPTQGAD--MTENGEEAKEEKFKFLPHHI 60
           M+T  I + ILLS  LL NFCYAAEE+     P +GA     +NGEE +EEKFKFL HH 
Sbjct: 379 MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 438

Query: 61  PFYKKPFFKPIPH-HPVLKKPFP-KPHYPPVFPSHP 93
           P+YKKPF KPIP+ HP LKKP P  P +    P HP
Sbjct: 439 PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHP 474

[Close]

BLAST of ClCG05G020720 vs. TrEMBL
Match: E5GCK5_CUCME (Annexin OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 9.4e-18
Identity = 58/128 (45.31%), Postives = 67/128 (52.34%), Query Frame = 1


Query: 1   MKTLSICVPILLSLFLLANFCYAAEENKVAILPTQGAD--MTENGEEAKEEKFKFLPHHI 60
           M+T  I + ILLS  LL NFCYAAEE+     P +GA     +NGEE +EEKFKFL HH 
Sbjct: 379 MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 438

Query: 61  PFYKKPFF---------------------KPIPHHPVLKKP-------------FPKPHY 93
           P+YKKPF                      KPIP HP LKKP             F KP +
Sbjct: 439 PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPISFKKKPIPVHPFFKKPIH 498

HSP 2 Score: 92.0 bits (227), Expect = 3.9e-16
Identity = 57/119 (47.90%), Postives = 67/119 (56.30%), Query Frame = 1


Query: 1   MKTLSICVPILLSLFLLANFCYAAEENKVAILPTQGAD--MTENGEEAKEEKFKFLPHHI 60
           MKT  I + ILLS  LL NFCYAAEE+       +GA     +NGEE ++EKFKFL HH 
Sbjct: 1   MKTACIFLGILLSFLLLVNFCYAAEESVTEFQSGKGAAGVTAKNGEE-EDEKFKFLLHHK 60

Query: 61  PFYKKPFFKPIPH-HPVLKKPFP-----------------------KP-HYPPVFPSHP 93
           P+YKKPF KPIP+ HP LKKP P                       KP  +PPVF +HP
Sbjct: 61  PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIVFEKKPLPVHPFFKKPIDHPPVFHTHP 118

[Close]

BLAST of ClCG05G020720 vs. NCBI nr
Match: gi|778706732|ref|XP_011655904.1| (PREDICTED: uncharacterized protein LOC101209862 [Cucumis sativus])

HSP 1 Score: 151.0 bits (380), Expect = 1.0e-33
Identity = 68/90 (75.56%), Postives = 76/90 (84.44%), Query Frame = 1


Query: 3   TLSICVPILLSLFLLANFCYAAEENKVAILPTQGADMTENGEEAKEEKFKFLPHHIPFYK 62
           T+SIC+ I LSLFLL NFCYAAEEN+ A LP QGA +T+NGEEAKEEKFKFLP HIPFYK
Sbjct: 64  TISICMAIFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYK 123

Query: 63  KPFFKPIPHHPVLKKPFPKPHYPPVFPSHP 93
           KP FK IP  P++KKPFPKP+ PPV PSHP
Sbjct: 124 KPIFKTIPRQPIIKKPFPKPYRPPVLPSHP 153

[Close]

BLAST of ClCG05G020720 vs. NCBI nr
Match: gi|700197123|gb|KGN52300.1| (hypothetical protein Csa_5G623640 [Cucumis sativus])

HSP 1 Score: 141.7 bits (356), Expect = 6.2e-31
Identity = 64/83 (77.11%), Postives = 70/83 (84.34%), Query Frame = 1


Query: 10 ILLSLFLLANFCYAAEENKVAILPTQGADMTENGEEAKEEKFKFLPHHIPFYKKPFFKPI 69
          I LSLFLL NFCYAAEEN+ A LP QGA +T+NGEEAKEEKFKFLP HIPFYKKP FK I
Sbjct: 3  IFLSLFLLLNFCYAAEENEDAFLPAQGAGITKNGEEAKEEKFKFLPDHIPFYKKPIFKTI 62

Query: 70 PHHPVLKKPFPKPHYPPVFPSHP 93
          P  P++KKPFPKP+ PPV PSHP
Sbjct: 63 PRQPIIKKPFPKPYRPPVLPSHP 85

[Close]

BLAST of ClCG05G020720 vs. NCBI nr
Match: gi|307136392|gb|ADN34202.1| (annexin [Cucumis melo subsp. melo])

HSP 1 Score: 102.4 bits (254), Expect = 4.2e-19
Identity = 54/96 (56.25%), Postives = 63/96 (65.62%), Query Frame = 1


Query: 1   MKTLSICVPILLSLFLLANFCYAAEENKVAILPTQGAD--MTENGEEAKEEKFKFLPHHI 60
           M+T  I + ILLS  LL NFCYAAEE+     P +GA     +NGEE +EEKFKFL HH 
Sbjct: 379 MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 438

Query: 61  PFYKKPFFKPIPH-HPVLKKPFP-KPHYPPVFPSHP 93
           P+YKKPF KPIP+ HP LKKP P  P +    P HP
Sbjct: 439 PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHP 474

[Close]

BLAST of ClCG05G020720 vs. NCBI nr
Match: gi|307136392|gb|ADN34202.1| (annexin [Cucumis melo subsp. melo])

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-17
Identity = 58/128 (45.31%), Postives = 67/128 (52.34%), Query Frame = 1


Query: 1   MKTLSICVPILLSLFLLANFCYAAEENKVAILPTQGAD--MTENGEEAKEEKFKFLPHHI 60
           M+T  I + ILLS  LL NFCYAAEE+     P +GA     +NGEE +EEKFKFL HH 
Sbjct: 379 MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 438

Query: 61  PFYKKPFF---------------------KPIPHHPVLKKP-------------FPKPHY 93
           P+YKKPF                      KPIP HP LKKP             F KP +
Sbjct: 439 PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPISFKKKPIPVHPFFKKPIH 498

HSP 2 Score: 102.4 bits (254), Expect = 4.2e-19
Identity = 54/96 (56.25%), Postives = 63/96 (65.62%), Query Frame = 1


Query: 1  MKTLSICVPILLSLFLLANFCYAAEENKVAILPTQGAD--MTENGEEAKEEKFKFLPHHI 60
          M+T  I + ILLS  LL NFCYAAEE+     P +GA     +NGEE +EEKFKFL HH 
Sbjct: 1  MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 60

Query: 61 PFYKKPFFKPIPH-HPVLKKPFP-KPHYPPVFPSHP 93
          P+YKKPF KPIP+ HP LKKP P  P +    P HP
Sbjct: 61 PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHP 96

[Close]

BLAST of ClCG05G020720 vs. NCBI nr
Match: gi|659092159|ref|XP_008446928.1| (PREDICTED: uncharacterized protein LOC103489493 [Cucumis melo])

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-17
Identity = 58/128 (45.31%), Postives = 67/128 (52.34%), Query Frame = 1


Query: 1   MKTLSICVPILLSLFLLANFCYAAEENKVAILPTQGAD--MTENGEEAKEEKFKFLPHHI 60
           M+T  I + ILLS  LL NFCYAAEE+     P +GA     +NGEE +EEKFKFL HH 
Sbjct: 1   MRTAGIFLGILLSFLLLVNFCYAAEESVAEFQPGKGAAGVTAKNGEEEQEEKFKFLHHHK 60

Query: 61  PFYKKPFF---------------------KPIPHHPVLKKP-------------FPKPHY 93
           P+YKKPF                      KPIP HP LKKP             F KP +
Sbjct: 61  PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIPVHPFLKKPISFKKKPIPVHPFFKKPIH 120

HSP 2 Score: 92.0 bits (227), Expect = 5.7e-16
Identity = 57/119 (47.90%), Postives = 67/119 (56.30%), Query Frame = 1


Query: 1   MKTLSICVPILLSLFLLANFCYAAEENKVAILPTQGAD--MTENGEEAKEEKFKFLPHHI 60
           MKT  I + ILLS  LL NFCYAAEE+       +GA     +NGEE ++EKFKFL HH 
Sbjct: 389 MKTACIFLGILLSFLLLVNFCYAAEESVTEFQSGKGAAGVTAKNGEE-EDEKFKFLLHHK 448

Query: 61  PFYKKPFFKPIPH-HPVLKKPFP-----------------------KP-HYPPVFPSHP 93
           P+YKKPF KPIP+ HP LKKP P                       KP  +PPVF +HP
Sbjct: 449 PYYKKPFLKPIPYKHPFLKKPIPVHPFHKKPIVFEKKPLPVHPFFKKPIDHPPVFHTHP 506

The following BLAST results are available for this feature:

BLAST of ClCG05G020720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRM7_CUCSA	4.3e-31	77.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623640 PE=4 SV=1	[more]
E5GCK5_CUCME	2.9e-19	56.25	Annexin OS=Cucumis melo subsp. melo PE=3 SV=1	[more]
E5GCK5_CUCME	9.4e-18	45.31	Annexin OS=Cucumis melo subsp. melo PE=3 SV=1	[more]

BLAST of ClCG05G020720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778706732\|ref\|XP_011655904.1\|	1.0e-33	75.56	PREDICTED: uncharacterized protein LOC101209862 [Cucumis sativus]	[more]
gi\|700197123\|gb\|KGN52300.1\|	6.2e-31	77.11	hypothetical protein Csa_5G623640 [Cucumis sativus]	[more]
gi\|307136392\|gb\|ADN34202.1\|	4.2e-19	56.25	annexin [Cucumis melo subsp. melo]	[more]
gi\|307136392\|gb\|ADN34202.1\|	1.3e-17	45.31	annexin [Cucumis melo subsp. melo]	[more]
gi\|659092159\|ref\|XP_008446928.1\|	1.3e-17	45.31	PREDICTED: uncharacterized protein LOC103489493 [Cucumis melo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005544	calcium-dependent phospholipid binding
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0004386	helicase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G020720.1	ClCG05G020720.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G020720	Csa5G623640	Cucumber (Chinese Long) v2	cuwcgB394
ClCG05G020720	MELO3C012454	Melon (DHL92) v3.5.1	mewcgB062
ClCG05G020720	Cla020590	Watermelon (97103) v1	wcgwmB285
ClCG05G020720	Cla97C05G102460	Watermelon (97103) v2	wcgwmbB229
ClCG05G020720	Bhi07G000763	Wax gourd	wcgwgoB469
ClCG05G020720	CSPI05G27430	Wild cucumber (PI 183967)	cpiwcgB412
ClCG05G020720	MELO3C012453.2	Melon (DHL92) v3.6.1	medwcgB061
ClCG05G020720	Carg01979	Silver-seed gourd	carwcgB0816
ClCG05G020720	CsaV3_5G036570	Cucumber (Chinese Long) v3	cucwcgB415

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G020720	Watermelon (97103) v2	wcgwmbB243
ClCG05G020720	Watermelon (Charleston Gray)	wcgwcgB166
ClCG05G020720	Cucumber (Gy14) v1	cgywcgB672
ClCG05G020720	Cucurbita maxima (Rimu)	cmawcgB160
ClCG05G020720	Cucurbita moschata (Rifu)	cmowcgB151
ClCG05G020720	Cucumber (Chinese Long) v2	cuwcgB140
ClCG05G020720	Melon (DHL92) v3.5.1	mewcgB287
ClCG05G020720	Watermelon (97103) v1	wcgwmB273
ClCG05G020720	Cucurbita pepo (Zucchini)	cpewcgB740
ClCG05G020720	Cucumber (Gy14) v2	cgybwcgB131
ClCG05G020720	Melon (DHL92) v3.6.1	medwcgB278
ClCG05G020720	Cucumber (Chinese Long) v3	cucwcgB150