MELO3C006032 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006032
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionOxygen-evolving enhancer protein 3-1
Locationchr6 : 680271 .. 681355 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGGCCAGAAAGTGTGTGTGTGTGTGTGTGTGTGTATGTTCTCCCAAATGGCGAAATGAATGGTAAGAAGCCAAAAGTACATCCAAAGCCATGCCTACCCTTCTTGCCAACGCCAACAGTACTCTCTTCTCCTCTCCCATTTCCACTCCCCACAAATCCCTCCACCGCCGCCACTTCCCCATCATCACCGCCTCCCTTCCCATCCACCGTCGCCATATCGCCACAACCCTTGCAGTGGTGATTGGGTTGCAAGCTGCAACACCCCTCGCGCTAGCCCAAAGTTGGGGTACACACTCGTTCATTAAGGAGCGATACTTCGAGCCCGGTTTGTCGGCCGATGAGGCAGTGGCGAGGATAAAACAGACGGCGGAAGGACTTCATAGCATCCGTGAGATGCTTGAGACCACGTCATGGAGGTATGTCATCTTCTACATTCGTTTGAAGTCGGCCTACCTCTCCCAAGACTTGAAAACTGCCATGACTACTTTGCCACAAGCTCGCCAAAACGATTTCGTTAAAACCGCTAACGAGTTGGTCGATAACATGGCTGAGGTATGTACTTTTCTATTGTTTTATTTTCATAATCCAAAAATATTTTACTAATTAAATTTAGTCCAAAGTCTAATTATTGATTAACTTTTTTTTGTTGAACTTTAATTTGATTTGGATTATGATATGTTTCAGTTGGATTATTACGTTCGCACACCCAAGGTGTATGAGTCATATTTGTACTACGAAAAGACATTGAAATCCATTGATGATCTGGTGGCTTTACTTGCTTAGAGATGTAAATAAAATAATTAATATCAAATGTTCTTCATCCCACAAAATTGAATGCATCAAATTTGTAGATTTGTGTTATTGATTTAAGATTTCTGTAGTCTTTTACTTCATTAGTTAATTATATTAATTCATGTGTAAAAAATTATTTTATTCTAGTAATTGTTATGAAAGAAAAAGGGTTATTAATTTCTTTCATTTTAAAAAATAAATACAGAATTTTGAGATCGAATTTTGTAGATTACTCTTAGCTATATTTTTAGTTTGTAACTTTGTCAATAAATATGTAGTGTACAAAGTTGGAT

mRNA sequence

AAGGCCAGAAAGTGTGTGTGTGTGTGTGTGTGTGTATGTTCTCCCAAATGGCGAAATGAATGGTAAGAAGCCAAAAGTACATCCAAAGCCATGCCTACCCTTCTTGCCAACGCCAACAGTACTCTCTTCTCCTCTCCCATTTCCACTCCCCACAAATCCCTCCACCGCCGCCACTTCCCCATCATCACCGCCTCCCTTCCCATCCACCGTCGCCATATCGCCACAACCCTTGCAGTGGTGATTGGGTTGCAAGCTGCAACACCCCTCGCGCTAGCCCAAAGTTGGGGTACACACTCGTTCATTAAGGAGCGATACTTCGAGCCCGGTTTGTCGGCCGATGAGGCAGTGGCGAGGATAAAACAGACGGCGGAAGGACTTCATAGCATCCGTGAGATGCTTGAGACCACGTCATGGAGGTATGTCATCTTCTACATTCGTTTGAAGTCGGCCTACCTCTCCCAAGACTTGAAAACTGCCATGACTACTTTGCCACAAGCTCGCCAAAACGATTTCGTTAAAACCGCTAACGAGTTGGTCGATAACATGGCTGAGTTGGATTATTACGTTCGCACACCCAAGGTGTATGAGTCATATTTGTACTACGAAAAGACATTGAAATCCATTGATGATCTGGTGGCTTTACTTGCTTAGAGATGTAAATAAAATAATTAATATCAAATGTTCTTCATCCCACAAAATTGAATGCATCAAATTTGTAGATTTGTGTTATTGATTTAAGATTTCTGTAGTCTTTTACTTCATTAGTTAATTATATTAATTCATGTGTAAAAAATTATTTTATTCTAGTAATTGTTATGAAAGAAAAAGGGTTATTAATTTCTTTCATTTTAAAAAATAAATACAGAATTTTGAGATCGAATTTTGTAGATTACTCTTAGCTATATTTTTAGTTTGTAACTTTGTCAATAAATATGTAGTGTACAAAGTTGGAT

Coding sequence (CDS)

ATGCCTACCCTTCTTGCCAACGCCAACAGTACTCTCTTCTCCTCTCCCATTTCCACTCCCCACAAATCCCTCCACCGCCGCCACTTCCCCATCATCACCGCCTCCCTTCCCATCCACCGTCGCCATATCGCCACAACCCTTGCAGTGGTGATTGGGTTGCAAGCTGCAACACCCCTCGCGCTAGCCCAAAGTTGGGGTACACACTCGTTCATTAAGGAGCGATACTTCGAGCCCGGTTTGTCGGCCGATGAGGCAGTGGCGAGGATAAAACAGACGGCGGAAGGACTTCATAGCATCCGTGAGATGCTTGAGACCACGTCATGGAGGTATGTCATCTTCTACATTCGTTTGAAGTCGGCCTACCTCTCCCAAGACTTGAAAACTGCCATGACTACTTTGCCACAAGCTCGCCAAAACGATTTCGTTAAAACCGCTAACGAGTTGGTCGATAACATGGCTGAGTTGGATTATTACGTTCGCACACCCAAGGTGTATGAGTCATATTTGTACTACGAAAAGACATTGAAATCCATTGATGATCTGGTGGCTTTACTTGCTTAG

Protein sequence

MPTLLANANSTLFSSPISTPHKSLHRRHFPIITASLPIHRRHIATTLAVVIGLQAATPLALAQSWGTHSFIKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSAYLSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVALLA*
Homology
[Close]
BLAST of MELO3C006032 vs. Swiss-Prot
Match: PNSL2_ARATH (Photosynthetic NDH subunit of lumenal location 2, chloroplastic OS=Arabidopsis thaliana GN=PNSL2 PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.5e-50
Identity = 101/148 (68.24%), Postives = 116/148 (78.38%), Query Frame = 1 

Query: 40  RRHIATTLAVVIGLQAATPLALAQS-WGTHSFIKERYFEPGLSADEAVARIKQTAEGLHS 99
           RR   T+L     +  AT  ALAQ  WGT SFIKE+YF PGLS ++A ARIKQTAEGL  
Sbjct: 43  RRRTLTSLITFTVIGGATSSALAQEKWGTRSFIKEKYFMPGLSPEDAAARIKQTAEGLRD 102

Query: 100 IREMLETTSWRYVIFYIRLKSAYLSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYY 159
           +REML+  SWRYVIFYIRLK AYLSQDL  AM  LP++R+ND+V+ ANELV+NM+ELD+Y
Sbjct: 103 MREMLDHMSWRYVIFYIRLKQAYLSQDLTNAMNILPESRRNDYVQAANELVENMSELDFY 162

Query: 160 VRTPKVYESYLYYEKTLKSIDDLVALLA 187
           VRTPKVYESYLYYEKTLKSID++V  LA
Sbjct: 163 VRTPKVYESYLYYEKTLKSIDNVVEFLA 190

[Close]
BLAST of MELO3C006032 vs. Swiss-Prot
Match: PSBQ2_MAIZE (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays GN=PSBQ2 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.2e-10
Identity = 32/115 (27.83%), Postives = 64/115 (55.65%), Query Frame = 1 

Query: 71  IKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSAYLSQDLKTAM 130
           +KER++   L   EAVAR+K +A+ + +++ +++  +W YV   +RL+++YL  DLKT +
Sbjct: 98  LKERFYLQPLPPAEAVARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVI 157

Query: 131 TTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVALL 186
            + P+  +    +   +L   + +LD+  +     E+  Y+  T  ++ D++A L
Sbjct: 158 ASKPKEEKKSLKELTGKLFSTIDDLDHAAKMKSTPEAEKYFAATKDALGDVLAKL 212

[Close]
BLAST of MELO3C006032 vs. Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 4.2e-10
Identity = 32/115 (27.83%), Postives = 64/115 (55.65%), Query Frame = 1 

Query: 71  IKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSAYLSQDLKTAM 130
           +K+R++   LS  EA AR K +A+ + +++  ++  +W YV   +RL+++YL  DL T +
Sbjct: 115 LKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVI 174

Query: 131 TTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVALL 186
           +  P+  +        +L   +  LDY  R+    ++  YY +T+ S+++++A L
Sbjct: 175 SAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKL 229

[Close]
BLAST of MELO3C006032 vs. Swiss-Prot
Match: PSBQ1_MAIZE (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 9.4e-10
Identity = 31/115 (26.96%), Postives = 63/115 (54.78%), Query Frame = 1 

Query: 71  IKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSAYLSQDLKTAM 130
           +KER++   L   EA AR+K +A+ + +++ +++  +W YV   +RL+++YL  DLKT +
Sbjct: 102 LKERFYLQPLPPAEAAARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVI 161

Query: 131 TTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVALL 186
            + P+  +    +   +L   + +LD+  +     E+  Y+  T  ++ D++A L
Sbjct: 162 ASKPKEEKKSLKELTGKLFSTIDDLDHAAKIKSTPEAEKYFAATKDALGDVLAKL 216

[Close]
BLAST of MELO3C006032 vs. Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-09
Identity = 30/115 (26.09%), Postives = 64/115 (55.65%), Query Frame = 1 

Query: 71  IKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSAYLSQDLKTAM 130
           +K+R++   L   EA AR K++A+ + +++ +++  +W YV   +R K++YL  DL T +
Sbjct: 109 LKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTII 168

Query: 131 TTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVALL 186
           ++ P+  +        +L D +  LDY  +     ++  YY +T+ ++++++A L
Sbjct: 169 SSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223

[Close]
BLAST of MELO3C006032 vs. TrEMBL
Match: A0A0A0L3W3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119660 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 6.4e-90
Identity = 176/188 (93.62%), Postives = 182/188 (96.81%), Query Frame = 1 

Query: 1   MPTLLANAN-STLFSSPISTPHKSLHRRHFPIITASLPIHRRHIATTLAVVIGLQAATPL 60
           MPTL ANAN +TLFSS ISTPHKS HR HFP+ITASLPIHRRHIATTLA+V+GLQAATPL
Sbjct: 1   MPTL-ANANPNTLFSSRISTPHKSRHRPHFPVITASLPIHRRHIATTLALVVGLQAATPL 60

Query: 61  -ALAQSWGTHSFIKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLK 120
            ALAQSWGTHSFIKERYFEPGLSA+EAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLK
Sbjct: 61  VALAQSWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLK 120

Query: 121 SAYLSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSI 180
           SAYLSQDLKTAMTTLPQAR+NDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSI
Sbjct: 121 SAYLSQDLKTAMTTLPQARRNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSI 180

Query: 181 DDLVALLA 187
           DDLVALLA
Sbjct: 181 DDLVALLA 187

[Close]
BLAST of MELO3C006032 vs. TrEMBL
Match: D7TN65_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g02680 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.9e-57
Identity = 125/185 (67.57%), Postives = 139/185 (75.14%), Query Frame = 1 

Query: 13  FSSPISTPHKSL----HRRH--FPIITASL-----PIHRRHIATTLAVVIGLQAATPLAL 72
           F+SP S     L    H R    P   ASL     PI RR I +TL         TPLAL
Sbjct: 4   FTSPTSLSCAQLTTAQHGRSPSLPATRASLSGEETPILRRRIVSTLLATSLALHGTPLAL 63

Query: 73  AQSWGTHSFIKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSAY 132
           A++WGT SF+KER+FEPGLS ++AVARI+QTAEGLHSIR MLET SWRYVIFYIRLKSAY
Sbjct: 64  AENWGTRSFLKERFFEPGLSPEDAVARIRQTAEGLHSIRHMLETMSWRYVIFYIRLKSAY 123

Query: 133 LSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDL 187
           LSQDLK AMTTLP++R+  +   ANELVDNMAE DYYVRTPKVYESYLYYEKTLKSIDDL
Sbjct: 124 LSQDLKNAMTTLPESRRRSYANKANELVDNMAEFDYYVRTPKVYESYLYYEKTLKSIDDL 183

[Close]
BLAST of MELO3C006032 vs. TrEMBL
Match: A0A0F7GYP0_9ROSI (Photosynthetic NDH subcomplex L 2 OS=Melianthus villosus GN=2 PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.9e-57
Identity = 123/185 (66.49%), Postives = 144/185 (77.84%), Query Frame = 1 

Query: 10  STLFSSPISTPHKSLHRRHFPIITASLPIH-----RRHIATTLAVV----IGLQAATPLA 69
           STL     STP K       PII +SLP+      RR I +TL       IGL A TPLA
Sbjct: 8   STLLRLQTSTPRKP----SLPIIRSSLPVEENAIIRRRILSTLFTTSMGTIGLNA-TPLA 67

Query: 70  LAQSWGTHSFIKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSA 129
           LA++WG+ SF+ ERYFEPGLS ++AVARI+QTAEGLHS+REML+T SWRYV+FYIRLKSA
Sbjct: 68  LAENWGSRSFLLERYFEPGLSPEDAVARIRQTAEGLHSMREMLDTMSWRYVMFYIRLKSA 127

Query: 130 YLSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDD 186
           YL+QDLK AM+TLPQ R+  +VKTANEL+DNMAE DYYVRTPKVYESYLYYEKTLKS+D+
Sbjct: 128 YLNQDLKNAMSTLPQTRRPAYVKTANELIDNMAEFDYYVRTPKVYESYLYYEKTLKSLDE 187

[Close]
BLAST of MELO3C006032 vs. TrEMBL
Match: M5Y597_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011707mg PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.2e-56
Identity = 121/195 (62.05%), Postives = 143/195 (73.33%), Query Frame = 1 

Query: 7   NANSTLFSSPISTPHKSLHRRHFPIITASLP---------IHRRHIATTL---AVVIGLQ 66
           N  +T   + I+ P   L +   P I ASLP           RR I T+    ++ +G+ 
Sbjct: 6   NTTTTFLHAQITKPQNYLCKISLPAIKASLPGAEEEENNATSRRKIVTSFLGTSLALGVH 65

Query: 67  A---ATPLALAQSWGTHSFIKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYV 126
               ATPL LA++WGT SFI+ER+FEPGLS ++AVARIKQTAEGLHSIR+MLE  +WRYV
Sbjct: 66  QHGIATPLGLAENWGTRSFIRERFFEPGLSPEDAVARIKQTAEGLHSIRDMLEAMAWRYV 125

Query: 127 IFYIRLKSAYLSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYY 186
           IFYIRLKSAYLSQDLK A T +P  R+ ++VKTANELV+NM E DYYVRTPKVYESYLYY
Sbjct: 126 IFYIRLKSAYLSQDLKNAATLVPDVRRQEYVKTANELVNNMTEFDYYVRTPKVYESYLYY 185

[Close]
BLAST of MELO3C006032 vs. TrEMBL
Match: A0A0D2SAU6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G087300 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.6e-56
Identity = 122/193 (63.21%), Postives = 143/193 (74.09%), Query Frame = 1 

Query: 9   NSTLF---SSPISTPHKS-LHRRHFPIITASLP--------IHRRHIATTLAVV----IG 68
           NST F   +    TP      R   PII AS           +RR + TT        +G
Sbjct: 6   NSTFFIHVNQKFPTPQSHHCSRLSLPIIRASFQPQQNNVIISNRRKLVTTFLATSLAALG 65

Query: 69  LQAATPLALAQSWGTHSFIKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVI 128
           L   TP+A+A++WGTHSF++ER+FEPGLS ++A ARIKQTAEGLHS+R+ML+T SWRYV+
Sbjct: 66  LNG-TPVAVAENWGTHSFLRERFFEPGLSPEDAAARIKQTAEGLHSMRDMLDTMSWRYVM 125

Query: 129 FYIRLKSAYLSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYE 186
           FYIRLK AYLSQDLK AM+TLPQ R++ +VKTANELVDNMAE DYYVRTPKVYESYLYYE
Sbjct: 126 FYIRLKQAYLSQDLKNAMSTLPQGRKDKYVKTANELVDNMAEFDYYVRTPKVYESYLYYE 185

[Close]
BLAST of MELO3C006032 vs. TAIR10
Match: AT1G14150.1 (AT1G14150.1 PsbQ-like 2)

HSP 1 Score: 199.9 bits (507), Expect = 1.4e-51
Identity = 101/148 (68.24%), Postives = 116/148 (78.38%), Query Frame = 1 

Query: 40  RRHIATTLAVVIGLQAATPLALAQS-WGTHSFIKERYFEPGLSADEAVARIKQTAEGLHS 99
           RR   T+L     +  AT  ALAQ  WGT SFIKE+YF PGLS ++A ARIKQTAEGL  
Sbjct: 43  RRRTLTSLITFTVIGGATSSALAQEKWGTRSFIKEKYFMPGLSPEDAAARIKQTAEGLRD 102

Query: 100 IREMLETTSWRYVIFYIRLKSAYLSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYY 159
           +REML+  SWRYVIFYIRLK AYLSQDL  AM  LP++R+ND+V+ ANELV+NM+ELD+Y
Sbjct: 103 MREMLDHMSWRYVIFYIRLKQAYLSQDLTNAMNILPESRRNDYVQAANELVENMSELDFY 162

Query: 160 VRTPKVYESYLYYEKTLKSIDDLVALLA 187
           VRTPKVYESYLYYEKTLKSID++V  LA
Sbjct: 163 VRTPKVYESYLYYEKTLKSIDNVVEFLA 190

[Close]
BLAST of MELO3C006032 vs. TAIR10
Match: AT4G05180.1 (AT4G05180.1 photosystem II subunit Q-2)

HSP 1 Score: 66.2 bits (160), Expect = 2.4e-11
Identity = 32/115 (27.83%), Postives = 64/115 (55.65%), Query Frame = 1 

Query: 71  IKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSAYLSQDLKTAM 130
           +K+R++   LS  EA AR K +A+ + +++  ++  +W YV   +RL+++YL  DL T +
Sbjct: 115 LKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVI 174

Query: 131 TTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVALL 186
           +  P+  +        +L   +  LDY  R+    ++  YY +T+ S+++++A L
Sbjct: 175 SAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKL 229

[Close]
BLAST of MELO3C006032 vs. TAIR10
Match: AT4G21280.2 (AT4G21280.2 photosystem II subunit QA)

HSP 1 Score: 64.7 bits (156), Expect = 6.9e-11
Identity = 30/115 (26.09%), Postives = 64/115 (55.65%), Query Frame = 1 

Query: 71  IKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSAYLSQDLKTAM 130
           +K+R++   L   EA AR K++A+ + +++ +++  +W YV   +R K++YL  DL T +
Sbjct: 109 LKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTII 168

Query: 131 TTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVALL 186
           ++ P+  +        +L D +  LDY  +     ++  YY +T+ ++++++A L
Sbjct: 169 SSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223

[Close]
BLAST of MELO3C006032 vs. TAIR10
Match: AT3G01440.1 (AT3G01440.1 PsbQ-like 1)

HSP 1 Score: 50.8 bits (120), Expect = 1.0e-06
Identity = 29/121 (23.97%), Postives = 57/121 (47.11%), Query Frame = 1 

Query: 66  GTHSFIKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSAYLSQD 125
           GT +FIK+  +   +     + R+K+ A  L ++ +++   +  YV  Y+RLKS +L  D
Sbjct: 100 GTRTFIKKGVYVADIGTKGRMYRVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYD 159

Query: 126 LKTAMTTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVALL 185
               ++      +      AN L DN  +L+   +T  + E+   Y+ T   + +++  +
Sbjct: 160 FDNLISAAASEDKQPLTDLANRLFDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRM 219

Query: 186 A 187
           A
Sbjct: 220 A 220

[Close]
BLAST of MELO3C006032 vs. NCBI nr
Match: gi|659075001|ref|XP_008437911.1| (PREDICTED: psbQ-like protein 1, chloroplastic [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 8.3e-99
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1 

Query: 1   MPTLLANANSTLFSSPISTPHKSLHRRHFPIITASLPIHRRHIATTLAVVIGLQAATPLA 60
           MPTLLANANSTLFSSPISTPHKSLHRRHFPIITASLPIHRRHIATTLAVVIGLQAATPLA
Sbjct: 1   MPTLLANANSTLFSSPISTPHKSLHRRHFPIITASLPIHRRHIATTLAVVIGLQAATPLA 60

Query: 61  LAQSWGTHSFIKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSA 120
           LAQSWGTHSFIKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSA
Sbjct: 61  LAQSWGTHSFIKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSA 120

Query: 121 YLSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDD 180
           YLSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDD
Sbjct: 121 YLSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDD 180

Query: 181 LVALLA 187
           LVALLA
Sbjct: 181 LVALLA 186

[Close]
BLAST of MELO3C006032 vs. NCBI nr
Match: gi|449432058|ref|XP_004133817.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 2, chloroplastic [Cucumis sativus])

HSP 1 Score: 338.2 bits (866), Expect = 9.2e-90
Identity = 176/188 (93.62%), Postives = 182/188 (96.81%), Query Frame = 1 

Query: 1   MPTLLANAN-STLFSSPISTPHKSLHRRHFPIITASLPIHRRHIATTLAVVIGLQAATPL 60
           MPTL ANAN +TLFSS ISTPHKS HR HFP+ITASLPIHRRHIATTLA+V+GLQAATPL
Sbjct: 1   MPTL-ANANPNTLFSSRISTPHKSRHRPHFPVITASLPIHRRHIATTLALVVGLQAATPL 60

Query: 61  -ALAQSWGTHSFIKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLK 120
            ALAQSWGTHSFIKERYFEPGLSA+EAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLK
Sbjct: 61  VALAQSWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLK 120

Query: 121 SAYLSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSI 180
           SAYLSQDLKTAMTTLPQAR+NDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSI
Sbjct: 121 SAYLSQDLKTAMTTLPQARRNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSI 180

Query: 181 DDLVALLA 187
           DDLVALLA
Sbjct: 181 DDLVALLA 187

[Close]
BLAST of MELO3C006032 vs. NCBI nr
Match: gi|1009154202|ref|XP_015895040.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 2, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 231.9 bits (590), Expect = 9.3e-58
Identity = 129/193 (66.84%), Postives = 143/193 (74.09%), Query Frame = 1 

Query: 11  TLFSSPIST---PHKSLHRRHFPIITASLP------IHRRHIATTLAV----VIGLQ--- 70
           T F + I+T   P      R FP I AS          RR I TT       + GLQ   
Sbjct: 2   TNFLTQITTLLCPQHCCRARAFPSIRASFQNEENTTCSRRKIVTTFVASSVALTGLQYQV 61

Query: 71  -AATPLALAQSWGTHSFIKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIF 130
              TP ALAQ+WGT SFI+ER+FEPGLS ++AVARIKQTAEGLHSIR+MLE+ SWRYVIF
Sbjct: 62  IMKTPDALAQNWGTRSFIRERFFEPGLSPEDAVARIKQTAEGLHSIRDMLESMSWRYVIF 121

Query: 131 YIRLKSAYLSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEK 187
           YIRLKSAYLSQDLK AMTTLP+AR+ D+ K ANELVDNMAE DYYVRTPKVYESY+YYEK
Sbjct: 122 YIRLKSAYLSQDLKNAMTTLPEARRQDYAKVANELVDNMAEFDYYVRTPKVYESYVYYEK 181

[Close]
BLAST of MELO3C006032 vs. NCBI nr
Match: gi|720007404|ref|XP_010258294.1| (PREDICTED: psbQ-like protein 1, chloroplastic [Nelumbo nucifera])

HSP 1 Score: 231.5 bits (589), Expect = 1.2e-57
Identity = 119/185 (64.32%), Postives = 145/185 (78.38%), Query Frame = 1 

Query: 10  STLFSSPISTPHKSLHRRHFPIITASL-----PIHRRHIATTL---AVVIGLQAATPLAL 69
           + L+   +    K    R F  I AS      P+HRR + +T    ++ +GLQA TP+AL
Sbjct: 8   TALYHRHMPQTFKGRQSRSFSTIRASSIGEENPVHRRKVVSTFLTASLALGLQA-TPIAL 67

Query: 70  AQSWGTHSFIKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSAY 129
           A++WGT SFIKER+FEPGLS+++AVARI+QTAEGLHSIR MLET SWRYV+FYIRLK+AY
Sbjct: 68  AENWGTRSFIKERFFEPGLSSEDAVARIRQTAEGLHSIRGMLETMSWRYVLFYIRLKTAY 127

Query: 130 LSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDL 187
           LSQDLK  +T +P+ R + +VKTANELVDNMAE DYYVRTPKVYESYLYYEKTLKS+DDL
Sbjct: 128 LSQDLKNVLTIMPENRLDSYVKTANELVDNMAEFDYYVRTPKVYESYLYYEKTLKSMDDL 187

[Close]
BLAST of MELO3C006032 vs. NCBI nr
Match: gi|225425642|ref|XP_002272064.1| (PREDICTED: psbQ-like protein 1, chloroplastic [Vitis vinifera])

HSP 1 Score: 230.3 bits (586), Expect = 2.7e-57
Identity = 125/185 (67.57%), Postives = 139/185 (75.14%), Query Frame = 1 

Query: 13  FSSPISTPHKSL----HRRH--FPIITASL-----PIHRRHIATTLAVVIGLQAATPLAL 72
           F+SP S     L    H R    P   ASL     PI RR I +TL         TPLAL
Sbjct: 4   FTSPTSLSCAQLTTAQHGRSPSLPATRASLSGEETPILRRRIVSTLLATSLALHGTPLAL 63

Query: 73  AQSWGTHSFIKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSAY 132
           A++WGT SF+KER+FEPGLS ++AVARI+QTAEGLHSIR MLET SWRYVIFYIRLKSAY
Sbjct: 64  AENWGTRSFLKERFFEPGLSPEDAVARIRQTAEGLHSIRHMLETMSWRYVIFYIRLKSAY 123

Query: 133 LSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDL 187
           LSQDLK AMTTLP++R+  +   ANELVDNMAE DYYVRTPKVYESYLYYEKTLKSIDDL
Sbjct: 124 LSQDLKNAMTTLPESRRRSYANKANELVDNMAEFDYYVRTPKVYESYLYYEKTLKSIDDL 183

The following BLAST results are available for this feature:
BLAST of MELO3C006032 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PNSL2_ARATH2.5e-5068.24Photosynthetic NDH subunit of lumenal location 2, chloroplastic OS=Arabidopsis t... [more]
PSBQ2_MAIZE3.2e-1027.83Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays GN=PSBQ2 PE=3 SV... [more]
PSBQ2_ARATH4.2e-1027.83Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=P... [more]
PSBQ1_MAIZE9.4e-1026.96Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV... [more]
PSBQ1_ARATH1.2e-0926.09Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=P... [more]
BLAST of MELO3C006032 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3W3_CUCSA6.4e-9093.62Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119660 PE=4 SV=1[more]
D7TN65_VITVI1.9e-5767.57Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g02680 PE=4 SV=... [more]
A0A0F7GYP0_9ROSI1.9e-5766.49Photosynthetic NDH subcomplex L 2 OS=Melianthus villosus GN=2 PE=2 SV=1[more]
M5Y597_PRUPE1.2e-5662.05Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011707mg PE=4 SV=1[more]
A0A0D2SAU6_GOSRA4.6e-5663.21Uncharacterized protein OS=Gossypium raimondii GN=B456_013G087300 PE=4 SV=1[more]
BLAST of MELO3C006032 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G14150.11.4e-5168.24 PsbQ-like 2[more]
AT4G05180.12.4e-1127.83 photosystem II subunit Q-2[more]
AT4G21280.26.9e-1126.09 photosystem II subunit QA[more]
AT3G01440.11.0e-0623.97 PsbQ-like 1[more]
BLAST of MELO3C006032 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075001|ref|XP_008437911.1|8.3e-99100.00PREDICTED: psbQ-like protein 1, chloroplastic [Cucumis melo][more]
gi|449432058|ref|XP_004133817.1|9.2e-9093.62PREDICTED: photosynthetic NDH subunit of lumenal location 2, chloroplastic [Cucu... [more]
gi|1009154202|ref|XP_015895040.1|9.3e-5866.84PREDICTED: photosynthetic NDH subunit of lumenal location 2, chloroplastic [Zizi... [more]
gi|720007404|ref|XP_010258294.1|1.2e-5764.32PREDICTED: psbQ-like protein 1, chloroplastic [Nelumbo nucifera][more]
gi|225425642|ref|XP_002272064.1|2.7e-5767.57PREDICTED: psbQ-like protein 1, chloroplastic [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008797PSII_PsbQ
IPR023222PsbQ-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0009523photosystem II
GO:0009654photosystem II oxygen evolving complex
GO:0019898extrinsic component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0015979 photosynthesis
biological_process GO:0044763 single-organism cellular process
biological_process GO:0044710 single-organism metabolic process
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0009344 nitrite reductase complex [NAD(P)H]
cellular_component GO:0009654 photosystem II oxygen evolving complex
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009523 photosystem II
cellular_component GO:0009535 chloroplast thylakoid membrane
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU54082melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006032T1MELO3C006032T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU54082MU54082transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008797Oxygen-evolving enhancer protein 3PFAMPF05757PsbQcoord: 62..186
score: 4.1
IPR023222PsbQ-like domainGENE3DG3DSA:1.20.120.290coord: 51..186
score: 9.4
IPR023222PsbQ-like domainunknownSSF101112Oxygen-evolving enhancer protein 3,coord: 75..186
score: 6.15
NoneNo IPR availablePANTHERPTHR33399FAMILY NOT NAMEDcoord: 31..186
score: 6.1
NoneNo IPR availablePANTHERPTHR33399:SF5PSBQ-LIKE PROTEIN 1, CHLOROPLASTICcoord: 31..186
score: 6.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006032Csa3G119660Cucumber (Chinese Long) v2cumeB236
MELO3C006032Cla021166Watermelon (97103) v1mewmB461
MELO3C006032ClCG05G000900Watermelon (Charleston Gray)mewcgB427
MELO3C006032Cla97C05G081100Watermelon (97103) v2mewmbB434
MELO3C006032Bhi01G000341Wax gourdmewgoB540
MELO3C006032CSPI03G08010Wild cucumber (PI 183967)cpimeB230
MELO3C006032Cucsa.259150Cucumber (Gy14) v1cgymeB439
MELO3C006032Lsi05G021130Bottle gourd (USVL1VR-Ls)lsimeB378
MELO3C006032CsGy3G008150Cucumber (Gy14) v2cgybmeB200
MELO3C006032CsaV3_3G008130Cucumber (Chinese Long) v3cucmeB236
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006032Wild cucumber (PI 183967)cpimeB291
MELO3C006032Wild cucumber (PI 183967)cpimeB399
MELO3C006032Cucumber (Chinese Long) v2cumeB297
MELO3C006032Cucumber (Chinese Long) v2cumeB402
MELO3C006032Watermelon (Charleston Gray)mewcgB420
MELO3C006032Watermelon (Charleston Gray)mewcgB430
MELO3C006032Watermelon (97103) v1mewmB478
MELO3C006032Watermelon (97103) v1mewmB466
MELO3C006032Cucurbita pepo (Zucchini)cpemeB585
MELO3C006032Cucurbita pepo (Zucchini)cpemeB698
MELO3C006032Cucurbita pepo (Zucchini)cpemeB815
MELO3C006032Bottle gourd (USVL1VR-Ls)lsimeB031
MELO3C006032Cucumber (Gy14) v2cgybmeB252
MELO3C006032Cucumber (Gy14) v2cgybmeB349
MELO3C006032Silver-seed gourdcarmeB0968
MELO3C006032Cucumber (Chinese Long) v3cucmeB297
MELO3C006032Cucumber (Chinese Long) v3cucmeB411
MELO3C006032Watermelon (97103) v2mewmbB421
MELO3C006032Watermelon (97103) v2mewmbB439
MELO3C006032Wax gourdmewgoB523
MELO3C006032Wax gourdmewgoB550
MELO3C006032Melon (DHL92) v3.5.1memeB018
MELO3C006032Melon (DHL92) v3.5.1memeB150
MELO3C006032Melon (DHL92) v3.5.1memeB151
MELO3C006032Cucumber (Gy14) v1cgymeB139
MELO3C006032Cucumber (Gy14) v1cgymeB369
MELO3C006032Cucurbita maxima (Rimu)cmameB004
MELO3C006032Cucurbita maxima (Rimu)cmameB242
MELO3C006032Cucurbita maxima (Rimu)cmameB766
MELO3C006032Cucurbita maxima (Rimu)cmameB770
MELO3C006032Cucurbita moschata (Rifu)cmomeB230
MELO3C006032Cucurbita moschata (Rifu)cmomeB572
MELO3C006032Cucurbita moschata (Rifu)cmomeB755