Bhi01G000341 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi01G000341
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Oxygen-evolving enhancer 3-2, chloroplastic-like protein
Location	chr1 : 8406926 .. 8409583 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTAATGTGTCACACAATAATTAAACAGAGTGAAAAATGTTAGTACAATAAATATTAAGATGGGTAATATTTGGATGTATCACAAGATGCATTTATCTCTATGCATCTCTTATCATTACTCATACAAAAATAATAATAAATAAAAAGAATTTACCACCTATCAAATTGTGATCGAATAATTTTATAGGATGTACATGGATAAATGATGTCTGGAATACATCTAAATAATTTCATATTAAGATTGAGGATTTTAGCAAATTTACCCCCATACTTTTAAAAACACGATAGTGGGAGTGGGACACAAAGTGATAAAATGTAAGGTTGCGGATGAATGAAATGGATAAGAATTATGTAAGGTAAGGCCACAAAGTGCGTTGTGTCTTTCCCTATGGAAATTAAAAGTGAGAAGCCATAACTTTATCCAAAGCCATGACTTCCTTTGCCAATGCCAACACTCTCTTCATCTCTCGCATTTCCACTCCTCACAAATGCAGCCATCGCCGCCGCCACCACTTCCCCATCATCACCGCCTCTCTTTCCATCCACCGCCGCCATATCGCGACAGCCCTCGCGGCTGTGATTGGCCTGCAGGCCACAGCGCCCCTCGCGCTAGCCCAAAGCTGGGGTACCCACTCGTTCATTAAGGAGCGGTACTTTGAGCCCGGGCTATCGGCAGAGGAGGCGGTGGCGAGGATAAAACAGACCGCGGAAGGACTTCATAGCATTCGTGAGATGCTGGAGACCATGTCATGGAGATATGTGATCTTCTACATTCGACTAAAGTCGGCTTATCTCTCCCAAGACTTGAAAACTGCCATGTCTGTTTTGCCACAAGCTCGCCAAAATGACTTTGTTAAGACTGCTAATGAGTTGGTTGATAACATGGCCGAGGTATGTAAGCTTCACGTATTTCATAACTTAAAAATACAATGTAGACATAAATGTTGAATGTGGGATCTTATACATGTAGGATACTAAAAAAAAATTGCATAATTTTATGAGGGAGGAATTTGATATTCTAATATATGTTATTGTTGGTTTTTATTTGTGTTTTGATTATTAATCAGGGAAAATGGTTTGAACCTATATCAAAAATTGAATATTTTTGGGAAAAATACATTTTTGTTCCTAAATTTCGTGTTTAATTTATATTTTTGATTCCTATACGTTTAAAAAATATAACTTTTTTAATTCTTAAGTTTTGAGCTTAATTTCAATTTAATATTCCCTAAGTTTCAAAATGTTACAATTTTACTCTTAAGATTTGAGTTTTGTTTCAATTTGATCTTTTTGTTTCAAATTTACAAATTCACTTCAATCTTATGCGCTATTGTCTATTAATTAATTAGTTTAAAATAAGAATGAAGTGAAATTTTCAAATTAACTTTAATTATAATGAGAAGAAATATTGAAATTTAATTAGTTGTAAATTGCTTATTTTAAATTAATTAATAGATATTAAAACTAAAGATTGAAAGTAAGTATTTAGTGGAAATTCAAGACAAAAAATATAAATTTTGAAATTAGGGACCAAATTGCAACAAAACTCAAATATCAAAGATAAATGTGTAACATTTTAAAACTTATATACCAAACTGAAATCAAATTCAAAACTTAATAATTATGAAAATGGTAACATGTGTAATATAAGGATGAAATAAAAAATAGACTCAAAATCTAAGATCAAAAAATAATATTTATTTATTTTTAACAAAGTGTGCTTTAGGAATTGTGAGATTGTTGGAATTTAATATGGGTAAGACATCTAAAATTATACCGACCACGATTTAATATAAAAGAATAATTGCTAAAGTGAACTTGACTCAATAATATTAGTCTAAGGTCGGAGAATCAATTCTCCTTACCCACAATTGTATCTAAGTAAAAAAAAAAAAATATATTAAAGGGTAATTATTTTGCAGTTTTTGAAATTAGCAAATTGTCAATTAAGATACACAAATGTATGTATTAAATATGGGAATAATACTATTTACTCTAGTTTATATAAATTCAAGAATATATATGTAAGAGGAATATGTCTTATTTATCATTTTATTTTATTTGTGGATATTTTAAATCTATTAAATGCAATAAAAATAGACAAAATAGATAAACATCATATTCAAATGTGAGTAAGTGTTTTAATGGAGGTGTAGGTAGGGAAGCATTGTACTAAATTTAGTCTATAATCTAATTGATTAATTTGGTTTGTGATTGTCATTCAATTTTTTTTTTTATTTGAATTGATATTTCAGTTGGATTATTACGTTCGCACACCAAAGGTGTATGAGTCGTATTTGTATTACGAGAAGACATTGAAATCCATTGATGATCTGGTGGCTTTACTGGCATAGCTGCATTATCTTAAAATCTTCATCACATATTCAATGCATCAAAAGGAAAGCTTGGTCTTACAAGATCCAAATGCGTAGTTTTAAGATTTTGTAGTCTTTTATTATATAAACACGTGTGTAAAAAATATTATTCGATAGATATTATTTCTTTCGTTTTAAAAAAAGTGAATATTTTTTAGGTACTTGGATACTGTAGTTATATTTTTACTTGTAATTGAATAATAATTTGTCAATGATGAATCAGATATCTTGTAACAAATAACAAGGAAAAATAATACTTTCTTTGTTCACAGAGTTTTAAAT

mRNA sequence

ATCTAATGTGTCACACAATAATTAAACAGAGTGAAAAATGTTAGTACAATAAATATTAAGATGGGTAATATTTGGATGTATCACAAGATGCATTTATCTCTATGCATCTCTTATCATTACTCATACAAAAATAATAATAAATAAAAAGAATTTACCACCTATCAAATTGTGATCGAATAATTTTATAGGATGTACATGGATAAATGATGTCTGGAATACATCTAAATAATTTCATATTAAGATTGAGGATTTTAGCAAATTTACCCCCATACTTTTAAAAACACGATAGTGGGAGTGGGACACAAAGTGATAAAATGTAAGGTTGCGGATGAATGAAATGGATAAGAATTATGTAAGGTAAGGCCACAAAGTGCGTTGTGTCTTTCCCTATGGAAATTAAAAGTGAGAAGCCATAACTTTATCCAAAGCCATGACTTCCTTTGCCAATGCCAACACTCTCTTCATCTCTCGCATTTCCACTCCTCACAAATGCAGCCATCGCCGCCGCCACCACTTCCCCATCATCACCGCCTCTCTTTCCATCCACCGCCGCCATATCGCGACAGCCCTCGCGGCTGTGATTGGCCTGCAGGCCACAGCGCCCCTCGCGCTAGCCCAAAGCTGGGGTACCCACTCGTTCATTAAGGAGCGGTACTTTGAGCCCGGGCTATCGGCAGAGGAGGCGGTGGCGAGGATAAAACAGACCGCGGAAGGACTTCATAGCATTCGTGAGATGCTGGAGACCATGTCATGGAGATATGTGATCTTCTACATTCGACTAAAGTCGGCTTATCTCTCCCAAGACTTGAAAACTGCCATGTCTGTTTTGCCACAAGCTCGCCAAAATGACTTTGTTAAGACTGCTAATGAGTTGGTTGATAACATGGCCGAGTTGGATTATTACGTTCGCACACCAAAGGTGTATGAGTCGTATTTGTATTACGAGAAGACATTGAAATCCATTGATGATCTGGTGGCTTTACTGGCATAGCTGCATTATCTTAAAATCTTCATCACATATTCAATGCATCAAAAGGAAAGCTTGGTCTTACAAGATCCAAATGCGTAGTTTTAAGATTTTGTAGTCTTTTATTATATAAACACGTGTGTAAAAAATATTATTCGATAGATATTATTTCTTTCGTTTTAAAAAAAGTGAATATTTTTTAGGTACTTGGATACTGTAGTTATATTTTTACTTGTAATTGAATAATAATTTGTCAATGATGAATCAGATATCTTGTAACAAATAACAAGGAAAAATAATACTTTCTTTGTTCACAGAGTTTTAAAT

Coding sequence (CDS)

ATGACTTCCTTTGCCAATGCCAACACTCTCTTCATCTCTCGCATTTCCACTCCTCACAAATGCAGCCATCGCCGCCGCCACCACTTCCCCATCATCACCGCCTCTCTTTCCATCCACCGCCGCCATATCGCGACAGCCCTCGCGGCTGTGATTGGCCTGCAGGCCACAGCGCCCCTCGCGCTAGCCCAAAGCTGGGGTACCCACTCGTTCATTAAGGAGCGGTACTTTGAGCCCGGGCTATCGGCAGAGGAGGCGGTGGCGAGGATAAAACAGACCGCGGAAGGACTTCATAGCATTCGTGAGATGCTGGAGACCATGTCATGGAGATATGTGATCTTCTACATTCGACTAAAGTCGGCTTATCTCTCCCAAGACTTGAAAACTGCCATGTCTGTTTTGCCACAAGCTCGCCAAAATGACTTTGTTAAGACTGCTAATGAGTTGGTTGATAACATGGCCGAGTTGGATTATTACGTTCGCACACCAAAGGTGTATGAGTCGTATTTGTATTACGAGAAGACATTGAAATCCATTGATGATCTGGTGGCTTTACTGGCATAG

Protein sequence

MTSFANANTLFISRISTPHKCSHRRRHHFPIITASLSIHRRHIATALAAVIGLQATAPLALAQSWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVALLA

Homology

[Close]

BLAST of Bhi01G000341 vs. TAIR10
Match: AT1G14150.1 (PsbQ-like 2)

HSP 1 Score: 197.2 bits (500), Expect = 8.9e-51
Identity = 101/148 (68.24%), Postives = 119/148 (80.41%), Query Frame = 0


Query: 40  RRHIATALAAVIGLQATAPLALAQ-SWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHS 99
           RR   T+L     +      ALAQ  WGT SFIKE+YF PGLS E+A ARIKQTAEGL  
Sbjct: 43  RRRTLTSLITFTVIGGATSSALAQEKWGTRSFIKEKYFMPGLSPEDAAARIKQTAEGLRD 102

Query: 100 IREMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNDFVKTANELVDNMAELDYY 159
           +REML+ MSWRYVIFYIRLK AYLSQDL  AM++LP++R+ND+V+ ANELV+NM+ELD+Y
Sbjct: 103 MREMLDHMSWRYVIFYIRLKQAYLSQDLTNAMNILPESRRNDYVQAANELVENMSELDFY 162

Query: 160 VRTPKVYESYLYYEKTLKSIDDLVALLA 187
           VRTPKVYESYLYYEKTLKSID++V  LA
Sbjct: 163 VRTPKVYESYLYYEKTLKSIDNVVEFLA 190

[Close]

BLAST of Bhi01G000341 vs. TAIR10
Match: AT4G05180.1 (photosystem II subunit Q-2)

HSP 1 Score: 65.1 bits (157), Expect = 5.3e-11
Identity = 33/115 (28.70%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 71  IKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRYVIFYIRLKSAYLSQDLKTAM 130
           +K+R++   LS  EA AR K +A+ + +++  ++  +W YV   +RL+++YL  DL T +
Sbjct: 115 LKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVI 174

Query: 131 SVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVALL 186
           S  P+  +        +L   +  LDY  R+    ++  YY +T+ S+++++A L
Sbjct: 175 SAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKL 229

[Close]

BLAST of Bhi01G000341 vs. TAIR10
Match: AT4G21280.2 (photosystem II subunit QA)

HSP 1 Score: 62.4 bits (150), Expect = 3.4e-10
Identity = 31/115 (26.96%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 71  IKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRYVIFYIRLKSAYLSQDLKTAM 130
           +K+R++   L   EA AR K++A+ + +++ +++  +W YV   +R K++YL  DL T +
Sbjct: 109 LKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTII 168

Query: 131 SVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVALL 186
           S  P+  +        +L D +  LDY  +     ++  YY +T+ ++++++A L
Sbjct: 169 SSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223

[Close]

BLAST of Bhi01G000341 vs. TAIR10
Match: AT3G01440.1 (PsbQ-like 1)

HSP 1 Score: 49.7 bits (117), Expect = 2.3e-06
Identity = 30/121 (24.79%), Postives = 59/121 (48.76%), Query Frame = 0


Query: 66  GTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRYVIFYIRLKSAYLSQD 125
           GT +FIK+  +   +  +  + R+K+ A  L ++ +++   +  YV  Y+RLKS +L  D
Sbjct: 100 GTRTFIKKGVYVADIGTKGRMYRVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYD 159

Query: 126 LKTAMSVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVALL 185
               +S      +      AN L DN  +L+   +T  + E+   Y+ T   + +++  +
Sbjct: 160 FDNLISAAASEDKQPLTDLANRLFDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRM 219

Query: 186 A 187
           A
Sbjct: 220 A 220

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BLAST of Bhi01G000341 vs. Swiss-Prot
Match: sp|Q9XI73|PNSL2_ARATH (Photosynthetic NDH subunit of lumenal location 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL2 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.6e-49
Identity = 101/148 (68.24%), Postives = 119/148 (80.41%), Query Frame = 0


Query: 40  RRHIATALAAVIGLQATAPLALAQ-SWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHS 99
           RR   T+L     +      ALAQ  WGT SFIKE+YF PGLS E+A ARIKQTAEGL  
Sbjct: 43  RRRTLTSLITFTVIGGATSSALAQEKWGTRSFIKEKYFMPGLSPEDAAARIKQTAEGLRD 102

Query: 100 IREMLETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNDFVKTANELVDNMAELDYY 159
           +REML+ MSWRYVIFYIRLK AYLSQDL  AM++LP++R+ND+V+ ANELV+NM+ELD+Y
Sbjct: 103 MREMLDHMSWRYVIFYIRLKQAYLSQDLTNAMNILPESRRNDYVQAANELVENMSELDFY 162

Query: 160 VRTPKVYESYLYYEKTLKSIDDLVALLA 187
           VRTPKVYESYLYYEKTLKSID++V  LA
Sbjct: 163 VRTPKVYESYLYYEKTLKSIDNVVEFLA 190

[Close]

BLAST of Bhi01G000341 vs. Swiss-Prot
Match: sp|Q41932|PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 9.5e-10
Identity = 33/115 (28.70%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 71  IKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRYVIFYIRLKSAYLSQDLKTAM 130
           +K+R++   LS  EA AR K +A+ + +++  ++  +W YV   +RL+++YL  DL T +
Sbjct: 115 LKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVI 174

Query: 131 SVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVALL 186
           S  P+  +        +L   +  LDY  R+    ++  YY +T+ S+++++A L
Sbjct: 175 SAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKL 229

[Close]

BLAST of Bhi01G000341 vs. Swiss-Prot
Match: sp|Q41806|PSBQ2_MAIZE (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays OX=4577 GN=PSBQ2 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.1e-09
Identity = 32/115 (27.83%), Postives = 66/115 (57.39%), Query Frame = 0


Query: 71  IKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRYVIFYIRLKSAYLSQDLKTAM 130
           +KER++   L   EAVAR+K +A+ + +++ +++  +W YV   +RL+++YL  DLKT +
Sbjct: 98  LKERFYLQPLPPAEAVARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVI 157

Query: 131 SVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVALL 186
           +  P+  +    +   +L   + +LD+  +     E+  Y+  T  ++ D++A L
Sbjct: 158 ASKPKEEKKSLKELTGKLFSTIDDLDHAAKMKSTPEAEKYFAATKDALGDVLAKL 212

[Close]

BLAST of Bhi01G000341 vs. Swiss-Prot
Match: sp|Q9XFT3|PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 62.4 bits (150), Expect = 6.2e-09
Identity = 31/115 (26.96%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 71  IKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRYVIFYIRLKSAYLSQDLKTAM 130
           +K+R++   L   EA AR K++A+ + +++ +++  +W YV   +R K++YL  DL T +
Sbjct: 109 LKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTII 168

Query: 131 SVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVALL 186
           S  P+  +        +L D +  LDY  +     ++  YY +T+ ++++++A L
Sbjct: 169 SSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223

[Close]

BLAST of Bhi01G000341 vs. Swiss-Prot
Match: sp|Q41048|PSBQ1_MAIZE (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays OX=4577 GN=PSBQ1 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.2e-09
Identity = 31/115 (26.96%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 71  IKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRYVIFYIRLKSAYLSQDLKTAM 130
           +KER++   L   EA AR+K +A+ + +++ +++  +W YV   +RL+++YL  DLKT +
Sbjct: 102 LKERFYLQPLPPAEAAARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVI 161

Query: 131 SVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVALL 186
           +  P+  +    +   +L   + +LD+  +     E+  Y+  T  ++ D++A L
Sbjct: 162 ASKPKEEKKSLKELTGKLFSTIDDLDHAAKIKSTPEAEKYFAATKDALGDVLAKL 216

[Close]

BLAST of Bhi01G000341 vs. TrEMBL
Match: tr|A0A0A0L3W3|A0A0A0L3W3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119660 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.0e-81
Identity = 164/183 (89.62%), Postives = 168/183 (91.80%), Query Frame = 0


Query: 5   ANANTLFISRISTPHKCSHRRRHHFPIITASLSIHRRHIATALAAVIGLQATAPL-ALAQ 64
           AN NTLF SRISTPHK  H  R HFP+ITASL IHRRHIAT LA V+GLQA  PL ALAQ
Sbjct: 7   ANPNTLFSSRISTPHKSRH--RPHFPVITASLPIHRRHIATTLALVVGLQAATPLVALAQ 66

Query: 65  SWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRYVIFYIRLKSAYLS 124
           SWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLET SWRYVIFYIRLKSAYLS
Sbjct: 67  SWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSAYLS 126

Query: 125 QDLKTAMSVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVA 184
           QDLKTAM+ LPQAR+NDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVA
Sbjct: 127 QDLKTAMTTLPQARRNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVA 186

Query: 185 LLA 187
           LLA
Sbjct: 187 LLA 187

[Close]

BLAST of Bhi01G000341 vs. TrEMBL
Match: tr|A0A1S3AVQ2|A0A1S3AVQ2_CUCME (photosynthetic NDH subunit of lumenal location 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483197 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 4.3e-76
Identity = 159/186 (85.48%), Postives = 161/186 (86.56%), Query Frame = 0


Query: 2   TSFANAN-TLFISRISTPHKCSHRRRHHFPIITASLSIHRRHIATALAAVIGLQATAPLA 61
           T  ANAN TLF S ISTPHK  HRR  HFPII          IAT LA VIGLQA  PLA
Sbjct: 3   TLLANANSTLFSSPISTPHKSLHRR--HFPIIXXXXXXXXXXIATTLAVVIGLQAATPLA 62

Query: 62  LAQSWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRYVIFYIRLKSA 121
           LAQSWGTHSFIKERYFEPGLSA+EAVARIKQTAEGLHSIREMLET SWRYVIFYIRLKSA
Sbjct: 63  LAQSWGTHSFIKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSA 122

Query: 122 YLSQDLKTAMSVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDD 181
           YLSQDLKTAM+ LPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDD
Sbjct: 123 YLSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDD 182

Query: 182 LVALLA 187
           LVALLA
Sbjct: 183 LVALLA 186

[Close]

BLAST of Bhi01G000341 vs. TrEMBL
Match: tr|A0A2P4HTC9|A0A2P4HTC9_QUESU (Photosynthetic ndh subunit of lumenal location 2, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_15765 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.2e-59
Identity = 130/196 (66.33%), Postives = 155/196 (79.08%), Query Frame = 0


Query: 1   MTSFANANTLFI-SRISTPHKCSHRRRHHFPIITASLS-----IHRRH-IATALA---AV 60
           M+SF N +T  I ++ + PH   HR++   PI+ AS        HRR+ +AT LA   A 
Sbjct: 1   MSSFTNTSTAPIHAQHTKPHSHDHRKKSSVPIVRASFPSEQNVTHRRNFVATLLATSMAA 60

Query: 61  IGLQATAPLALAQSWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRY 120
           IG+  T P+A AQ+WGT SF+KERYFEPGLS E+AVARI+QTAEGLHSIR ML+TM+WRY
Sbjct: 61  IGVHGT-PIAFAQNWGTRSFLKERYFEPGLSPEDAVARIRQTAEGLHSIRYMLDTMAWRY 120

Query: 121 VIFYIRLKSAYLSQDLKTAMSVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLY 180
           V+FYIRLK AYLSQD+K  MS+LP+ R+ D+VKTANELVDNM ELDY+VRTPKVYESYLY
Sbjct: 121 VLFYIRLKQAYLSQDMKNVMSLLPENRRKDYVKTANELVDNMMELDYFVRTPKVYESYLY 180

Query: 181 YEKTLKSIDDLVALLA 187
           YEKTLKSIDDLVALLA
Sbjct: 181 YEKTLKSIDDLVALLA 195

[Close]

BLAST of Bhi01G000341 vs. TrEMBL
Match: tr|A0A0D2SAU6|A0A0D2SAU6_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G087300 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.2e-57
Identity = 133/202 (65.84%), Postives = 154/202 (76.24%), Query Frame = 0


Query: 1   MTSFANANTLFI---SRISTP--HKCSHRRRHHFPIITAS---------LSIHRRHIATA 60
           MTSF N +T FI    +  TP  H CS   R   PII AS         +S  R+ + T 
Sbjct: 1   MTSFTN-STFFIHVNQKFPTPQSHHCS---RLSLPIIRASFQPQQNNVIISNRRKLVTTF 60

Query: 61  LA---AVIGLQATAPLALAQSWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREML 120
           LA   A +GL  T P+A+A++WGTHSF++ER+FEPGLS E+A ARIKQTAEGLHS+R+ML
Sbjct: 61  LATSLAALGLNGT-PVAVAENWGTHSFLRERFFEPGLSPEDAAARIKQTAEGLHSMRDML 120

Query: 121 ETMSWRYVIFYIRLKSAYLSQDLKTAMSVLPQARQNDFVKTANELVDNMAELDYYVRTPK 180
           +TMSWRYV+FYIRLK AYLSQDLK AMS LPQ R++ +VKTANELVDNMAE DYYVRTPK
Sbjct: 121 DTMSWRYVMFYIRLKQAYLSQDLKNAMSTLPQGRKDKYVKTANELVDNMAEFDYYVRTPK 180

Query: 181 VYESYLYYEKTLKSIDDLVALL 186
           VYESYLYYEKTLKSIDDLVALL
Sbjct: 181 VYESYLYYEKTLKSIDDLVALL 197

[Close]

BLAST of Bhi01G000341 vs. TrEMBL
Match: tr|D7TN65|D7TN65_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0026g02680 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.0e-57
Identity = 125/192 (65.10%), Postives = 148/192 (77.08%), Query Frame = 0


Query: 1   MTSFANANTLFISRISTPHKCSHRRRHHFPIITASLS------IHRRHIATALAAVIGLQ 60
           M+SF +  +L  ++++T     H R    P   ASLS      + RR ++T LA  + L 
Sbjct: 1   MSSFTSPTSLSCAQLTT---AQHGRSPSLPATRASLSGEETPILRRRIVSTLLATSLALH 60

Query: 61  ATAPLALAQSWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRYVIFY 120
            T PLALA++WGT SF+KER+FEPGLS E+AVARI+QTAEGLHSIR MLETMSWRYVIFY
Sbjct: 61  GT-PLALAENWGTRSFLKERFFEPGLSPEDAVARIRQTAEGLHSIRHMLETMSWRYVIFY 120

Query: 121 IRLKSAYLSQDLKTAMSVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKT 180
           IRLKSAYLSQDLK AM+ LP++R+  +   ANELVDNMAE DYYVRTPKVYESYLYYEKT
Sbjct: 121 IRLKSAYLSQDLKNAMTTLPESRRRSYANKANELVDNMAEFDYYVRTPKVYESYLYYEKT 180

Query: 181 LKSIDDLVALLA 187
           LKSIDDLVA+LA
Sbjct: 181 LKSIDDLVAMLA 188

[Close]

BLAST of Bhi01G000341 vs. NCBI nr
Match: XP_022946003.1 (photosynthetic NDH subunit of lumenal location 2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 314.7 bits (805), Expect = 2.1e-82
Identity = 162/186 (87.10%), Postives = 173/186 (93.01%), Query Frame = 0


Query: 1   MTSFANANTLFISRISTPHKCSHRRRHHFPIITASLSIHRRHIATALAAVIGLQATAPLA 60
           M +FANA TLF SRI TPH+C    RH FPII+ASLSIHRRHIATALA V+GLQA AP A
Sbjct: 1   MPAFANATTLFSSRIPTPHRC---HRHPFPIISASLSIHRRHIATALALVVGLQAAAPPA 60

Query: 61  LAQSWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRYVIFYIRLKSA 120
           LAQ+WGTHSFIKERYFEPGLS EEAVARI+QTAEGLHSIR+MLETMSWRYVIFYIRLKSA
Sbjct: 61  LAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSA 120

Query: 121 YLSQDLKTAMSVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDD 180
           YLSQDLKTAMSVLPQARQN++VKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKS+DD
Sbjct: 121 YLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDD 180

Query: 181 LVALLA 187
           LVA+LA
Sbjct: 181 LVAILA 183

[Close]

BLAST of Bhi01G000341 vs. NCBI nr
Match: XP_022972860.1 (photosynthetic NDH subunit of lumenal location 2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 311.6 bits (797), Expect = 1.8e-81
Identity = 160/186 (86.02%), Postives = 172/186 (92.47%), Query Frame = 0


Query: 1   MTSFANANTLFISRISTPHKCSHRRRHHFPIITASLSIHRRHIATALAAVIGLQATAPLA 60
           M +FANA TLF SRI TPH+C    RH FPII+ASLSI RRHIATALA V+GLQA AP A
Sbjct: 1   MPAFANATTLFSSRIPTPHRC---HRHPFPIISASLSIQRRHIATALALVVGLQAAAPPA 60

Query: 61  LAQSWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRYVIFYIRLKSA 120
           LAQ+WGTHSFIKERYF+PGLS EEAVARI+QTAEGLHSIR+MLETMSWRYVIFYIRLKSA
Sbjct: 61  LAQTWGTHSFIKERYFQPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSA 120

Query: 121 YLSQDLKTAMSVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDD 180
           YLSQDLKTAMSVLPQARQND+VKTANELVDNMAELDYY+RTPKVYESYLYYEKTLKS+DD
Sbjct: 121 YLSQDLKTAMSVLPQARQNDYVKTANELVDNMAELDYYIRTPKVYESYLYYEKTLKSMDD 180

Query: 181 LVALLA 187
           LVA+LA
Sbjct: 181 LVAILA 183

[Close]

BLAST of Bhi01G000341 vs. NCBI nr
Match: XP_004133817.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 2, chloroplastic [Cucumis sativus] >KGN56433.1 hypothetical protein Csa_3G119660 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 3.0e-81
Identity = 164/183 (89.62%), Postives = 168/183 (91.80%), Query Frame = 0


Query: 5   ANANTLFISRISTPHKCSHRRRHHFPIITASLSIHRRHIATALAAVIGLQATAPL-ALAQ 64
           AN NTLF SRISTPHK  H  R HFP+ITASL IHRRHIAT LA V+GLQA  PL ALAQ
Sbjct: 7   ANPNTLFSSRISTPHKSRH--RPHFPVITASLPIHRRHIATTLALVVGLQAATPLVALAQ 66

Query: 65  SWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRYVIFYIRLKSAYLS 124
           SWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLET SWRYVIFYIRLKSAYLS
Sbjct: 67  SWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSAYLS 126

Query: 125 QDLKTAMSVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVA 184
           QDLKTAM+ LPQAR+NDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVA
Sbjct: 127 QDLKTAMTTLPQARRNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDDLVA 186

Query: 185 LLA 187
           LLA
Sbjct: 187 LLA 187

[Close]

BLAST of Bhi01G000341 vs. NCBI nr
Match: XP_023545788.1 (photosynthetic NDH subunit of lumenal location 2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.1 bits (793), Expect = 5.2e-81
Identity = 161/186 (86.56%), Postives = 171/186 (91.94%), Query Frame = 0


Query: 1   MTSFANANTLFISRISTPHKCSHRRRHHFPIITASLSIHRRHIATALAAVIGLQATAPLA 60
           M +FANA TLF SRI TPH+C    RH FPII+ASLSI RRHIATALA V GLQA AP A
Sbjct: 1   MPAFANATTLFSSRIPTPHRC---HRHPFPIISASLSIQRRHIATALALVAGLQAAAPPA 60

Query: 61  LAQSWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRYVIFYIRLKSA 120
           LAQ+WGTHSFIKERYFEPGLS EEAVARI+QTAEGLHSIR+MLETMSWRYVIFYIRLKSA
Sbjct: 61  LAQTWGTHSFIKERYFEPGLSGEEAVARIRQTAEGLHSIRDMLETMSWRYVIFYIRLKSA 120

Query: 121 YLSQDLKTAMSVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDD 180
           YLSQDLKTAMSVLPQARQN++VKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKS+DD
Sbjct: 121 YLSQDLKTAMSVLPQARQNEYVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSMDD 180

Query: 181 LVALLA 187
           LVA+LA
Sbjct: 181 LVAILA 183

[Close]

BLAST of Bhi01G000341 vs. NCBI nr
Match: XP_008437911.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 2, chloroplastic [Cucumis melo])

HSP 1 Score: 293.1 bits (749), Expect = 6.6e-76
Identity = 159/186 (85.48%), Postives = 161/186 (86.56%), Query Frame = 0


Query: 2   TSFANAN-TLFISRISTPHKCSHRRRHHFPIITASLSIHRRHIATALAAVIGLQATAPLA 61
           T  ANAN TLF S ISTPHK  HRR  HFPII          IAT LA VIGLQA  PLA
Sbjct: 3   TLLANANSTLFSSPISTPHKSLHRR--HFPIIXXXXXXXXXXIATTLAVVIGLQAATPLA 62

Query: 62  LAQSWGTHSFIKERYFEPGLSAEEAVARIKQTAEGLHSIREMLETMSWRYVIFYIRLKSA 121
           LAQSWGTHSFIKERYFEPGLSA+EAVARIKQTAEGLHSIREMLET SWRYVIFYIRLKSA
Sbjct: 63  LAQSWGTHSFIKERYFEPGLSADEAVARIKQTAEGLHSIREMLETTSWRYVIFYIRLKSA 122

Query: 122 YLSQDLKTAMSVLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDD 181
           YLSQDLKTAM+ LPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDD
Sbjct: 123 YLSQDLKTAMTTLPQARQNDFVKTANELVDNMAELDYYVRTPKVYESYLYYEKTLKSIDD 182

Query: 182 LVALLA 187
           LVALLA
Sbjct: 183 LVALLA 186

The following BLAST results are available for this feature:

BLAST of Bhi01G000341 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14150.1	8.9e-51	68.24	PsbQ-like 2	[more]
AT4G05180.1	5.3e-11	28.70	photosystem II subunit Q-2	[more]
AT4G21280.2	3.4e-10	26.96	photosystem II subunit QA	[more]
AT3G01440.1	2.3e-06	24.79	PsbQ-like 1	[more]

BLAST of Bhi01G000341 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9XI73\|PNSL2_ARATH	1.6e-49	68.24	Photosynthetic NDH subunit of lumenal location 2, chloroplastic OS=Arabidopsis t...	[more]
sp\|Q41932\|PSBQ2_ARATH	9.5e-10	28.70	Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
sp\|Q41806\|PSBQ2_MAIZE	2.1e-09	27.83	Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays OX=4577 GN=PSBQ2...	[more]
sp\|Q9XFT3\|PSBQ1_ARATH	6.2e-09	26.96	Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
sp\|Q41048\|PSBQ1_MAIZE	6.2e-09	26.96	Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays OX=4577 GN=PSBQ1...	[more]

BLAST of Bhi01G000341 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L3W3\|A0A0A0L3W3_CUCSA	2.0e-81	89.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119660 PE=4 SV=1	[more]
tr\|A0A1S3AVQ2\|A0A1S3AVQ2_CUCME	4.3e-76	85.48	photosynthetic NDH subunit of lumenal location 2, chloroplastic OS=Cucumis melo ...	[more]
tr\|A0A2P4HTC9\|A0A2P4HTC9_QUESU	2.2e-59	66.33	Photosynthetic ndh subunit of lumenal location 2, chloroplastic OS=Quercus suber...	[more]
tr\|A0A0D2SAU6\|A0A0D2SAU6_GOSRA	1.2e-57	65.84	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G087300 PE=4 ...	[more]
tr\|D7TN65\|D7TN65_VITVI	2.0e-57	65.10	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0026g02680 PE=4 SV=...	[more]

BLAST of Bhi01G000341 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946003.1	2.1e-82	87.10	photosynthetic NDH subunit of lumenal location 2, chloroplastic [Cucurbita mosch...	[more]
XP_022972860.1	1.8e-81	86.02	photosynthetic NDH subunit of lumenal location 2, chloroplastic [Cucurbita maxim...	[more]
XP_004133817.1	3.0e-81	89.62	PREDICTED: photosynthetic NDH subunit of lumenal location 2, chloroplastic [Cucu...	[more]
XP_023545788.1	5.2e-81	86.56	photosynthetic NDH subunit of lumenal location 2, chloroplastic [Cucurbita pepo ...	[more]
XP_008437911.1	6.6e-76	85.48	PREDICTED: photosynthetic NDH subunit of lumenal location 2, chloroplastic [Cucu...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0009654	photosystem II oxygen evolving complex
GO:0009523	photosystem II
GO:0019898	extrinsic component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

Vocabulary: **INTERPRO**
Term	Definition
IPR023222	PsbQ-like_dom_sf
IPR008797	PSII_PsbQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0015979	photosynthesis
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0044710	single-organism metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009344	nitrite reductase complex [NAD(P)H]
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0009543	chloroplast thylakoid lumen
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000341	Bhi01M000341	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.20.120.290		coord: 42..186 e-value: 1.6E-39 score: 137.3
None	No IPR available	PANTHER	PTHR33399:SF5	PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 2, CHLOROPLASTIC	coord: 1..186
IPR008797	Oxygen-evolving enhancer protein 3	PFAM	PF05757	PsbQ	coord: 10..186 e-value: 1.6E-34 score: 119.3
IPR008797	Oxygen-evolving enhancer protein 3	PANTHER	PTHR33399	FAMILY NOT NAMED	coord: 1..186
IPR023222	PsbQ-like domain superfamily	SUPERFAMILY	SSF101112	Oxygen-evolving enhancer protein 3,	coord: 75..186

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi01G000341	Csa3G119660	Cucumber (Chinese Long) v2	cuwgoB284
Bhi01G000341	MELO3C006032	Melon (DHL92) v3.5.1	mewgoB540
Bhi01G000341	ClCG05G000900	Watermelon (Charleston Gray)	wcgwgoB439
Bhi01G000341	CSPI03G08010	Wild cucumber (PI 183967)	cpiwgoB284
Bhi01G000341	Cucsa.259150	Cucumber (Gy14) v1	cgywgoB514
Bhi01G000341	Lsi05G021130	Bottle gourd (USVL1VR-Ls)	lsiwgoB433
Bhi01G000341	CsGy3G008150	Cucumber (Gy14) v2	cgybwgoB272
Bhi01G000341	MELO3C006032.2	Melon (DHL92) v3.6.1	medwgoB542
Bhi01G000341	CsaV3_3G008130	Cucumber (Chinese Long) v3	cucwgoB288
Bhi01G000341	Cla021166	Watermelon (97103) v1	wgowmB212
Bhi01G000341	Cla97C05G081100	Watermelon (97103) v2	wgowmbB191

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi01G000341	Wax gourd	wgowgoB026
Bhi01G000341	Wax gourd	wgowgoB053
Bhi01G000341	Cucurbita maxima (Rimu)	cmawgoB0000
Bhi01G000341	Cucurbita maxima (Rimu)	cmawgoB0315
Bhi01G000341	Cucurbita maxima (Rimu)	cmawgoB1010
Bhi01G000341	Cucurbita moschata (Rifu)	cmowgoB0303
Bhi01G000341	Cucurbita moschata (Rifu)	cmowgoB0440
Bhi01G000341	Cucurbita moschata (Rifu)	cmowgoB1013
Bhi01G000341	Cucurbita pepo (Zucchini)	cpewgoB0770
Bhi01G000341	Cucurbita pepo (Zucchini)	cpewgoB1105
Bhi01G000341	Bottle gourd (USVL1VR-Ls)	lsiwgoB442
Bhi01G000341	Watermelon (Charleston Gray)	wcgwgoB437
Bhi01G000341	Watermelon (97103) v2	wgowmbB190
Bhi01G000341	Silver-seed gourd	carwgoB1162