MELO3C004846.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C004846.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	histone H2B type 1-A-like
Location	chr12 : 8990335 .. 8991457 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCCCGAGGCGATCCCGTAGAGTCGTCGGTTCTGTCGTCCGGACAACCACAAGAGTAGTTGAAGAAACCGTACAAGTAGCGGTTGTGGAGAAAGAGAGCCAAGATTTAACTCAAGAACCTGACACCGCAGAAACCGCCGACGGTGGCGGTGAAATGTTTCGGAGGCCTGTCCCGGTGGAAGAGATTAAGTCTCCTGATCCACCGGAACAGCCGATAACTCATCCTGTGTCTGAAAATTTCGAGGTGAGAAGGGCAACAGATTCGACTTCGCAGCTAACTGAGGACACCGCGGTGACTCCGGAGATGGAACCCGAGGTCCAGAAAGGTAAGAGACTTAAGAGTATCGATATAATTTAACATGATATTATTTAATTAAATCAAATTTTGCAATGAACTTGTCAGTGACACATGAATTTGAACTCTTTTAGCTTTCACCCCACTAATTTTATAGCAAAAAAAAAAAAAAAAATTCACTCATTAATGCATGTAATTTCATATTGTATATGCTTTATAATTAACTGAACACATAAAGGTGTAGCAGACAGAGCCATCATGTGCAAATATATAGAACAACGAATGTGCAGATATAATTGTGTTTGAGTTGAATGAATAGGAAAAAAAGGTGGGAGGAGGAAGAAGAAGAAGGAGAAGAAAAGGGAAATTAAGGAAGGAAAAAGGAGAAGCAAAAATAGTAGTGGTAGTGGAAGAGAGGGATATAAGAGGTATGTGTTCAAGGTGTTGAAGCAAGTTCATCCAGAGATAGGAATTTCAGGACAAGCTATGCTTATTTTGAATAATTTCATGAATGATATGTTTCAAAGACTTGCAGAAGAGGCAACTAAACTCTCCAAATACACAGGTGTGTGTATATATATATATTCAAATTATTATATAATCATTTTTATTATTATTTTATTGATATATAATAATTAATGTGTTTTGGAAATTGGTGGGGCGATAATTGATAGGTGGAATGACCCTGTCGTCAAGGGAAATACAGGGGGCGGTGAGGTTGGTGTTACCGGGAGAGCTGGGGAAGCACGCCATTGCTGAGGGAACTAAAGCCGTGTCTAATTATGTATCTTATGGTAACAGAACAACAAAATCCAAGTTACTTTAA

mRNA sequence

ATGCCCCCGAGGCGATCCCGTAGAGTCGTCGGTTCTGTCGTCCGGACAACCACAAGAGTAGTTGAAGAAACCGTACAAGTAGCGGTTGTGGAGAAAGAGAGCCAAGATTTAACTCAAGAACCTGACACCGCAGAAACCGCCGACGGTGGCGGTGAAATGTTTCGGAGGCCTGTCCCGGTGGAAGAGATTAAGTCTCCTGATCCACCGGAACAGCCGATAACTCATCCTGTGTCTGAAAATTTCGAGGTGAGAAGGGCAACAGATTCGACTTCGCAGCTAACTGAGGACACCGCGGTGACTCCGGAGATGGAACCCGAGGTCCAGAAAGGAAAAAAAGGTGGGAGGAGGAAGAAGAAGAAGGAGAAGAAAAGGGAAATTAAGGAAGGAAAAAGGAGAAGCAAAAATAGTAGTGGTAGTGGAAGAGAGGGATATAAGAGGTATGTGTTCAAGGTGTTGAAGCAAGTTCATCCAGAGATAGGAATTTCAGGACAAGCTATGCTTATTTTGAATAATTTCATGAATGATATGTTTCAAAGACTTGCAGAAGAGGCAACTAAACTCTCCAAATACACAGGTGGAATGACCCTGTCGTCAAGGGAAATACAGGGGGCGGTGAGGTTGGTGTTACCGGGAGAGCTGGGGAAGCACGCCATTGCTGAGGGAACTAAAGCCGTGTCTAATTATGTATCTTATGGTAACAGAACAACAAAATCCAAGTTACTTTAA

Coding sequence (CDS)

ATGCCCCCGAGGCGATCCCGTAGAGTCGTCGGTTCTGTCGTCCGGACAACCACAAGAGTAGTTGAAGAAACCGTACAAGTAGCGGTTGTGGAGAAAGAGAGCCAAGATTTAACTCAAGAACCTGACACCGCAGAAACCGCCGACGGTGGCGGTGAAATGTTTCGGAGGCCTGTCCCGGTGGAAGAGATTAAGTCTCCTGATCCACCGGAACAGCCGATAACTCATCCTGTGTCTGAAAATTTCGAGGTGAGAAGGGCAACAGATTCGACTTCGCAGCTAACTGAGGACACCGCGGTGACTCCGGAGATGGAACCCGAGGTCCAGAAAGGAAAAAAAGGTGGGAGGAGGAAGAAGAAGAAGGAGAAGAAAAGGGAAATTAAGGAAGGAAAAAGGAGAAGCAAAAATAGTAGTGGTAGTGGAAGAGAGGGATATAAGAGGTATGTGTTCAAGGTGTTGAAGCAAGTTCATCCAGAGATAGGAATTTCAGGACAAGCTATGCTTATTTTGAATAATTTCATGAATGATATGTTTCAAAGACTTGCAGAAGAGGCAACTAAACTCTCCAAATACACAGGTGGAATGACCCTGTCGTCAAGGGAAATACAGGGGGCGGTGAGGTTGGTGTTACCGGGAGAGCTGGGGAAGCACGCCATTGCTGAGGGAACTAAAGCCGTGTCTAATTATGTATCTTATGGTAACAGAACAACAAAATCCAAGTTACTTTAA

Protein sequence

MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPVEEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQKGKKGGRRKKKKEKKREIKEGKRRSKNSSGSGREGYKRYVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKLL

Homology

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BLAST of MELO3C004846.2 vs. NCBI nr
Match: XP_008462313.1 (PREDICTED: histone H2B type 1-A-like [Cucumis melo])

HSP 1 Score: 368.6 bits (945), Expect = 1.6e-98
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60

Query: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQXXXXXXXXXXXX 120
           EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQXXXXXXXXXXXX
Sbjct: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180

Query: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 240
           AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL
Sbjct: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 240

Query: 241 L 242
           L
Sbjct: 241 L 241

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BLAST of MELO3C004846.2 vs. NCBI nr
Match: KGN64870.1 (hypothetical protein Csa_1G136770 [Cucumis sativus])

HSP 1 Score: 328.9 bits (842), Expect = 1.4e-86
Identity = 224/242 (92.56%), Postives = 233/242 (96.28%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPD AET DGGGEMFRR VPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDMAETPDGGGEMFRRTVPV 60

Query: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQ--XXXXXXXXXX 120
           EEIK+   P+QPI+HPVSE+FE+RRATDSTSQLTEDTAVTPEMEP+++  XXXXXXXXXX
Sbjct: 61  EEIKA--HPQQPISHPVSEDFELRRATDSTSQLTEDTAVTPEMEPKIRXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFKVLKQVHPEIGISGQAMLILNNFMNDMFQ 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFKVLKQVHPE+GISGQAMLILNNFMNDMFQ
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFKVLKQVHPEVGISGQAMLILNNFMNDMFQ 180

Query: 181 RLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKS 240
           RLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNR TKS
Sbjct: 181 RLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRATKS 240

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BLAST of MELO3C004846.2 vs. NCBI nr
Match: XP_011648456.1 (PREDICTED: histone H2B [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 3.9e-81
Identity = 191/240 (79.58%), Postives = 198/240 (82.50%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPD AET DGGGEMFRR VPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDMAETPDGGGEMFRRTVPV 60

Query: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQXXXXXXXXXXXX 120
           EEIK+   P+QPI+HPVSE+FE+RRATDSTSQLTEDTA     E +              
Sbjct: 61  EEIKA--HPQQPISHPVSEDFELRRATDSTSQLTEDTAKREIKEGK-------------- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180
                    XXXXXXXXXXXX      VFKVLKQVHPE+GISGQAMLILNNFMNDMFQRL
Sbjct: 121 ---------XXXXXXXXXXXXEGYKRYVFKVLKQVHPEVGISGQAMLILNNFMNDMFQRL 180

Query: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 240
           AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNR TKSKL
Sbjct: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRATKSKL 215

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BLAST of MELO3C004846.2 vs. NCBI nr
Match: XP_022937552.1 (histone H2B.6-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58
Identity = 161/237 (67.93%), Postives = 182/237 (76.79%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRR+VGSVVRTTT+VVEETV VAVVE ESQD+TQEP TAET  GG  +FRR +PV
Sbjct: 1   MPPRRSRRIVGSVVRTTTKVVEETVHVAVVEGESQDVTQEPATAET--GGDGVFRRTIPV 60

Query: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQXXXXXXXXXXXX 120
           E+         P T PV  + ++ R  DSTS++TED  VT +ME + +            
Sbjct: 61  ED---------PQTSPVWGDVKLTRPVDSTSEVTEDKDVTGKMESKAR------DGVRES 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180
           XXXXXXXXXXXXXXXXXXXX       VFKVLKQVHPE+GISGQAM+ILNN MNDMF+RL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXREGYKRYVFKVLKQVHPEVGISGQAMVILNNLMNDMFERL 180

Query: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTK 238
           AEEATKLSKYTGG TLSSREIQGAV+LV PGELGKHA+AEGTKAVS YVSY +R T+
Sbjct: 181 AEEATKLSKYTGGQTLSSREIQGAVKLVFPGELGKHAVAEGTKAVSTYVSYDHRRTQ 220

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BLAST of MELO3C004846.2 vs. NCBI nr
Match: XP_023537504.1 (histone H2B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.0 bits (598), Expect = 2.8e-58
Identity = 161/237 (67.93%), Postives = 183/237 (77.22%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRR+VGSVVRTTT+VVEETV VAVVE ESQD+TQEP TAET  GG  +FRR +PV
Sbjct: 1   MPPRRSRRIVGSVVRTTTKVVEETVHVAVVEGESQDVTQEPATAET--GGDGVFRRNIPV 60

Query: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQXXXXXXXXXXXX 120
           E+         P T PV  + ++ R  DSTS++TED  VT +ME + +            
Sbjct: 61  ED---------PQTSPVWGDVKLTRPVDSTSEVTEDKDVTGKMESKAR------NGIRES 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180
           XXXXXXXXXXXXXXXXXXXXX      VF+VLKQVHPE+GISGQAM+ILNN MNDMF+RL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXEGYKRYVFRVLKQVHPEVGISGQAMVILNNLMNDMFERL 180

Query: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTK 238
           AEEATKLSKYTGG TLSSREIQGAV+LV PGELGKHA+AEGTKAVS YVSY +R T+
Sbjct: 181 AEEATKLSKYTGGQTLSSREIQGAVKLVFPGELGKHAVAEGTKAVSTYVSYDHRRTR 220

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BLAST of MELO3C004846.2 vs. TAIR10
Match: AT1G08170.1 (Histone superfamily protein)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 56/87 (64.37%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 148 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 207
           V+KV+KQVHP++GI+ +AM ++N FM DMF+R+A+EA +LS YT   TLSSREI+ AVRL
Sbjct: 155 VYKVMKQVHPDLGITSKAMTVVNMFMGDMFERIAQEAARLSDYTKRRTLSSREIEAAVRL 214

Query: 208 VLPGELGKHAIAEGTKAVSNYVSYGNR 235
           VLPGEL +HA+AEG+KAVSN+V Y +R
Sbjct: 215 VLPGELSRHAVAEGSKAVSNFVGYDSR 241

[Close]

BLAST of MELO3C004846.2 vs. TAIR10
Match: AT2G37470.1 (Histone superfamily protein)

HSP 1 Score: 115.9 bits (289), Expect = 3.4e-26
Identity = 53/83 (63.86%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 148 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 207
           +FKVLKQVHP++GISG+AM I+N+F+ND+F++LA+E++KL++Y    T++SREIQ AVRL
Sbjct: 56  IFKVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL 115

Query: 208 VLPGELGKHAIAEGTKAVSNYVS 231
           VLPGEL KHA++EGTKAV+ + S
Sbjct: 116 VLPGELAKHAVSEGTKAVTKFTS 138

[Close]

BLAST of MELO3C004846.2 vs. TAIR10
Match: AT2G28720.1 (Histone superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 5.8e-26
Identity = 54/83 (65.06%), Postives = 73/83 (87.95%), Query Frame = 0


Query: 148 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 207
           +FKVLKQVHP+IGIS +AM I+N+F+ND+F++LA+EA+KL++Y    T++SREIQ AVRL
Sbjct: 68  IFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRL 127

Query: 208 VLPGELGKHAIAEGTKAVSNYVS 231
           VLPGEL KHA++EGTKAV+ + S
Sbjct: 128 VLPGELAKHAVSEGTKAVTKFTS 150

[Close]

BLAST of MELO3C004846.2 vs. TAIR10
Match: AT3G53650.1 (Histone superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 5.8e-26
Identity = 53/83 (63.86%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 148 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 207
           +FKVLKQVHP+IGISG+AM I+N+F+ND+F++LA+E+++L++Y    T++SREIQ AVRL
Sbjct: 55  IFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRL 114

Query: 208 VLPGELGKHAIAEGTKAVSNYVS 231
           VLPGEL KHA++EGTKAV+ + S
Sbjct: 115 VLPGELSKHAVSEGTKAVTKFTS 137

[Close]

BLAST of MELO3C004846.2 vs. TAIR10
Match: AT5G02570.1 (Histone superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 5.8e-26
Identity = 53/83 (63.86%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 148 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 207
           +FKVLKQVHP+IGISG+AM I+N+F+ND+F++LA+E+++L++Y    T++SREIQ AVRL
Sbjct: 49  IFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRL 108

Query: 208 VLPGELGKHAIAEGTKAVSNYVS 231
           VLPGEL KHA++EGTKAV+ + S
Sbjct: 109 VLPGELAKHAVSEGTKAVTKFTS 131

[Close]

BLAST of MELO3C004846.2 vs. Swiss-Prot
Match: sp|Q9SGE3|H2B2_ARATH (Histone H2B.2 OS=Arabidopsis thaliana OX=3702 GN=At1g08170 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-26
Identity = 56/87 (64.37%), Postives = 74/87 (85.06%), Query Frame = 0


Query: 148 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 207
           V+KV+KQVHP++GI+ +AM ++N FM DMF+R+A+EA +LS YT   TLSSREI+ AVRL
Sbjct: 155 VYKVMKQVHPDLGITSKAMTVVNMFMGDMFERIAQEAARLSDYTKRRTLSSREIEAAVRL 214

Query: 208 VLPGELGKHAIAEGTKAVSNYVSYGNR 235
           VLPGEL +HA+AEG+KAVSN+V Y +R
Sbjct: 215 VLPGELSRHAVAEGSKAVSNFVGYDSR 241

[Close]

BLAST of MELO3C004846.2 vs. Swiss-Prot
Match: sp|Q9ZUS0|H2B4_ARATH (Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3)

HSP 1 Score: 115.9 bits (289), Expect = 6.1e-25
Identity = 53/83 (63.86%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 148 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 207
           +FKVLKQVHP++GISG+AM I+N+F+ND+F++LA+E++KL++Y    T++SREIQ AVRL
Sbjct: 56  IFKVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL 115

Query: 208 VLPGELGKHAIAEGTKAVSNYVS 231
           VLPGEL KHA++EGTKAV+ + S
Sbjct: 116 VLPGELAKHAVSEGTKAVTKFTS 138

[Close]

BLAST of MELO3C004846.2 vs. Swiss-Prot
Match: sp|P40283|H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-24
Identity = 54/83 (65.06%), Postives = 73/83 (87.95%), Query Frame = 0


Query: 148 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 207
           +FKVLKQVHP+IGIS +AM I+N+F+ND+F++LA+EA+KL++Y    T++SREIQ AVRL
Sbjct: 67  IFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRL 126

Query: 208 VLPGELGKHAIAEGTKAVSNYVS 231
           VLPGEL KHA++EGTKAV+ + S
Sbjct: 127 VLPGELAKHAVSEGTKAVTKFTS 149

[Close]

BLAST of MELO3C004846.2 vs. Swiss-Prot
Match: sp|Q9SI96|H2B3_ARATH (Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3)

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-24
Identity = 54/83 (65.06%), Postives = 73/83 (87.95%), Query Frame = 0


Query: 148 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 207
           +FKVLKQVHP+IGIS +AM I+N+F+ND+F++LA+EA+KL++Y    T++SREIQ AVRL
Sbjct: 68  IFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRL 127

Query: 208 VLPGELGKHAIAEGTKAVSNYVS 231
           VLPGEL KHA++EGTKAV+ + S
Sbjct: 128 VLPGELAKHAVSEGTKAVTKFTS 150

[Close]

BLAST of MELO3C004846.2 vs. Swiss-Prot
Match: sp|Q9LFF6|H2B8_ARATH (Histone H2B.8 OS=Arabidopsis thaliana OX=3702 GN=At3g53650 PE=1 SV=3)

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-24
Identity = 53/83 (63.86%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 148 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 207
           +FKVLKQVHP+IGISG+AM I+N+F+ND+F++LA+E+++L++Y    T++SREIQ AVRL
Sbjct: 55  IFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRL 114

Query: 208 VLPGELGKHAIAEGTKAVSNYVS 231
           VLPGEL KHA++EGTKAV+ + S
Sbjct: 115 VLPGELSKHAVSEGTKAVTKFTS 137

[Close]

BLAST of MELO3C004846.2 vs. TrEMBL
Match: tr|A0A1S3CH74|A0A1S3CH74_CUCME (histone H2B type 1-A-like OS=Cucumis melo OX=3656 GN=LOC103500693 PE=3 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.1e-98
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60

Query: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQXXXXXXXXXXXX 120
           EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQXXXXXXXXXXXX
Sbjct: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXVFKVLKQVHPEIGISGQAMLILNNFMNDMFQRL 180

Query: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 240
           AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL
Sbjct: 181 AEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKSKL 240

Query: 241 L 242
           L
Sbjct: 241 L 241

[Close]

BLAST of MELO3C004846.2 vs. TrEMBL
Match: tr|A0A0A0LSH9|A0A0A0LSH9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G136770 PE=3 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 9.3e-87
Identity = 224/242 (92.56%), Postives = 233/242 (96.28%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETADGGGEMFRRPVPV 60
           MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPD AET DGGGEMFRR VPV
Sbjct: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDMAETPDGGGEMFRRTVPV 60

Query: 61  EEIKSPDPPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQ--XXXXXXXXXX 120
           EEIK+   P+QPI+HPVSE+FE+RRATDSTSQLTEDTAVTPEMEP+++  XXXXXXXXXX
Sbjct: 61  EEIKA--HPQQPISHPVSEDFELRRATDSTSQLTEDTAVTPEMEPKIRXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFKVLKQVHPEIGISGQAMLILNNFMNDMFQ 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFKVLKQVHPE+GISGQAMLILNNFMNDMFQ
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFKVLKQVHPEVGISGQAMLILNNFMNDMFQ 180

Query: 181 RLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRTTKS 240
           RLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNR TKS
Sbjct: 181 RLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYGNRATKS 240

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BLAST of MELO3C004846.2 vs. TrEMBL
Match: tr|A0A2I0LDQ3|A0A2I0LDQ3_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_000866 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 5.2e-29
Identity = 67/84 (79.76%), Postives = 77/84 (91.67%), Query Frame = 0


Query: 148 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 207
           VFKVLKQVHP + ISGQAM +LN +MNDMF+RLA+EA KLS+YTG +TLSSREIQGAVRL
Sbjct: 229 VFKVLKQVHPGMRISGQAMTVLNGYMNDMFERLADEAAKLSRYTGRLTLSSREIQGAVRL 288

Query: 208 VLPGELGKHAIAEGTKAVSNYVSY 232
           VLPGELG+HAIAEG KAVSNY+S+
Sbjct: 289 VLPGELGRHAIAEGAKAVSNYMSH 312

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BLAST of MELO3C004846.2 vs. TrEMBL
Match: tr|A0A218WA44|A0A218WA44_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr025129 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 5.2e-29
Identity = 67/84 (79.76%), Postives = 77/84 (91.67%), Query Frame = 0


Query: 148 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 207
           VFKVLKQVHP + ISGQAM +LN +MNDMF+RLA+EA KLS+YTG +TLSSREIQGAVRL
Sbjct: 229 VFKVLKQVHPGMRISGQAMTVLNGYMNDMFERLADEAAKLSRYTGRLTLSSREIQGAVRL 288

Query: 208 VLPGELGKHAIAEGTKAVSNYVSY 232
           VLPGELG+HAIAEG KAVSNY+S+
Sbjct: 289 VLPGELGRHAIAEGAKAVSNYMSH 312

[Close]

BLAST of MELO3C004846.2 vs. TrEMBL
Match: tr|A0A1R3GJD0|A0A1R3GJD0_COCAP (Histone H2B OS=Corchorus capsularis OX=210143 GN=CCACVL1_25545 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.5e-28
Identity = 116/245 (47.35%), Postives = 144/245 (58.78%), Query Frame = 0


Query: 1   MPPRRSRRVVGSVVRTTTRVVEETVQVAVVEKESQDLTQEPDTAETAD-----GGGEMFR 60
           M P+R  +V   VVRTT +VV+ETVQV+VV+  + D  ++ +T +T          E   
Sbjct: 1   MAPKRRAKV---VVRTTKKVVQETVQVSVVQPPAGDNGEQLETLKTIPVEDIAHEEERII 60

Query: 61  RPVPVEEIKSPD---PPEQPITHPVSENFEVRRATDSTSQLTEDTAVTPEMEPEVQXXXX 120
             +PVE +   D      Q    P  E      A  +  +  E + VTP+        XX
Sbjct: 61  TEIPVEGLTKDDKLQTEHQTEQVPAEEQPSDELAPKTKVEDQEPSIVTPK-------AXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFKVLKQVHPEIGISGQAMLILNNF 180
           XXXXXXXXXXXXXX                     VF+VLKQVHP + IS +AM I+N+ 
Sbjct: 121 XXXXXXXXXXXXXXKEKRKRVKRKGLDGNEAYKTYVFRVLKQVHPGMAISSKAMSIINSL 180

Query: 181 MNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSNYVSYG 238
           MNDMF+R+AEEATKLSKY  G TLSSREIQGAVRLVLPGELGKHA+AEG KAV+NY S+ 
Sbjct: 181 MNDMFERIAEEATKLSKYRDGKTLSSREIQGAVRLVLPGELGKHAVAEGNKAVTNYASHS 235

The following BLAST results are available for this feature:

BLAST of MELO3C004846.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462313.1	1.6e-98	100.00	PREDICTED: histone H2B type 1-A-like [Cucumis melo]	[more]
KGN64870.1	1.4e-86	92.56	hypothetical protein Csa_1G136770 [Cucumis sativus]	[more]
XP_011648456.1	3.9e-81	79.58	PREDICTED: histone H2B [Cucumis sativus]	[more]
XP_022937552.1	1.2e-58	67.93	histone H2B.6-like isoform X1 [Cucurbita moschata]	[more]
XP_023537504.1	2.8e-58	67.93	histone H2B-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C004846.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08170.1	1.1e-27	64.37	Histone superfamily protein	[more]
AT2G37470.1	3.4e-26	63.86	Histone superfamily protein	[more]
AT2G28720.1	5.8e-26	65.06	Histone superfamily protein	[more]
AT3G53650.1	5.8e-26	63.86	Histone superfamily protein	[more]
AT5G02570.1	5.8e-26	63.86	Histone superfamily protein	[more]

BLAST of MELO3C004846.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SGE3\|H2B2_ARATH	1.9e-26	64.37	Histone H2B.2 OS=Arabidopsis thaliana OX=3702 GN=At1g08170 PE=2 SV=1	[more]
sp\|Q9ZUS0\|H2B4_ARATH	6.1e-25	63.86	Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3	[more]
sp\|P40283\|H2B11_ARATH	1.0e-24	65.06	Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5	[more]
sp\|Q9SI96\|H2B3_ARATH	1.0e-24	65.06	Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3	[more]
sp\|Q9LFF6\|H2B8_ARATH	1.0e-24	63.86	Histone H2B.8 OS=Arabidopsis thaliana OX=3702 GN=At3g53650 PE=1 SV=3	[more]

BLAST of MELO3C004846.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CH74\|A0A1S3CH74_CUCME	1.1e-98	100.00	histone H2B type 1-A-like OS=Cucumis melo OX=3656 GN=LOC103500693 PE=3 SV=1	[more]
tr\|A0A0A0LSH9\|A0A0A0LSH9_CUCSA	9.3e-87	92.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G136770 PE=3 SV=1	[more]
tr\|A0A2I0LDQ3\|A0A2I0LDQ3_PUNGR	5.2e-29	79.76	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_000866 PE=3 SV=1	[more]
tr\|A0A218WA44\|A0A218WA44_PUNGR	5.2e-29	79.76	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr025129 PE=3 SV=1	[more]
tr\|A0A1R3GJD0\|A0A1R3GJD0_COCAP	1.5e-28	47.35	Histone H2B OS=Corchorus capsularis OX=210143 GN=CCACVL1_25545 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046982	protein heterodimerization activity
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0000786	nucleosome

Vocabulary: **INTERPRO**
Term	Definition
IPR009072	Histone-fold
IPR007125	Histone_H2A/H2B/H3
IPR000558	Histone_H2B

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000788	nuclear nucleosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C004846.2.1	MELO3C004846.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 185..202 score: 46.4 coord: 144..162 score: 69.92 coord: 163..183 score: 50.75 coord: 202..215 score: 78.23 coord: 215..228 score: 69.32
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 130..230 e-value: 4.9E-45 score: 165.6
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 84..231
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 84..207 e-value: 1.4E-19 score: 70.6
IPR009072	Histone-fold	GENE3D	G3DSA:1.10.20.10		coord: 99..231 e-value: 5.6E-49 score: 167.3
IPR009072	Histone-fold	SUPERFAMILY	SSF47113	Histone-fold	coord: 114..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..127
None	No IPR available	PANTHER	PTHR23428:SF50	HISTONE H2B	coord: 84..231

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C004846.2	Csa1G136770	Cucumber (Chinese Long) v2	cumedB010
MELO3C004846.2	CSPI01G14070	Wild cucumber (PI 183967)	cpimedB011
MELO3C004846.2	Cucsa.200320	Cucumber (Gy14) v1	cgymedB361
MELO3C004846.2	CmaCh12G008090	Cucurbita maxima (Rimu)	cmamedB161
MELO3C004846.2	CmoCh12G008190	Cucurbita moschata (Rifu)	cmomedB151
MELO3C004846.2	Lsi03G000660	Bottle gourd (USVL1VR-Ls)	lsimedB255
MELO3C004846.2	Cp4.1LG07g06810	Cucurbita pepo (Zucchini)	cpemedB880
MELO3C004846.2	CsGy1G014050	Cucumber (Gy14) v2	cgybmedB009
MELO3C004846.2	Cla001053	Watermelon (97103) v1	medwmB158
MELO3C004846.2	ClCG01G013960	Watermelon (Charleston Gray)	medwcgB127
MELO3C004846.2	Cla97C01G012930	Watermelon (97103) v2	medwmbB127
MELO3C004846.2	Bhi08G000108	Wax gourd	medwgoB176
MELO3C004846.2	CsaV3_1G014270	Cucumber (Chinese Long) v3	cucmedB009

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C004846.2	Cucurbita maxima (Rimu)	cmamedB215
MELO3C004846.2	Cucurbita moschata (Rifu)	cmomedB203
MELO3C004846.2	Cucurbita pepo (Zucchini)	cpemedB563
MELO3C004846.2	Watermelon (97103) v1	medwmB165
MELO3C004846.2	Silver-seed gourd	carmedB0174