Bhi08G000108 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08G000108
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Histone H2B
Location	chr8 : 5006523 .. 5006907 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGTATGTGTTTAAGGTGCTGAAGCAAGTGCATCCAGAGATAGGGATCTCAGGGAAAGCCATGGTCATTTTGAACAATTTCATGAATGATATGTTTCAGAGACTTGCTGATGAGGCAACTAAACTCTCAAAATACACAGGTAAATTGGGATTACGACCAAGAAGGATCTTCTATTATTTGTTATTGTTGTTATTTTGGAGAGGATAATAATGTTTGAATTTTGGTAATTGGTGGATGACATATAATAGGTGGAATGACGCTGTCGTCGAGGGAAATCCAAGGGGCGGTGAGGTTAGTGTTGCCAGGAGAGCTGGGGAAGCACGCCATTGCTGAGGGAACTAAAGCTGTCTCTGCTTATGTATCTTATGTTCATACGAAAACCTAA

mRNA sequence

AGGTATGTGTTTAAGGTGCTGAAGCAAGTGCATCCAGAGATAGGGATCTCAGGGAAAGCCATGGTCATTTTGAACAATTTCATGAATGATATGTTTCAGAGACTTGCTGATGAGGCAACTAAACTCTCAAAATACACAGGTGGAATGACGCTGTCGTCGAGGGAAATCCAAGGGGCGGTGAGGTTAGTGTTGCCAGGAGAGCTGGGGAAGCACGCCATTGCTGAGGGAACTAAAGCTGTCTCTGCTTATGTATCTTATGTTCATACGAAAACCTAA

Coding sequence (CDS)

AGGTATGTGTTTAAGGTGCTGAAGCAAGTGCATCCAGAGATAGGGATCTCAGGGAAAGCCATGGTCATTTTGAACAATTTCATGAATGATATGTTTCAGAGACTTGCTGATGAGGCAACTAAACTCTCAAAATACACAGGTGGAATGACGCTGTCGTCGAGGGAAATCCAAGGGGCGGTGAGGTTAGTGTTGCCAGGAGAGCTGGGGAAGCACGCCATTGCTGAGGGAACTAAAGCTGTCTCTGCTTATGTATCTTATGTTCATACGAAAACCTAA

Protein sequence

RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRLVLPGELGKHAIAEGTKAVSAYVSYVHTKT

Homology

[Close]

BLAST of Bhi08G000108 vs. Swiss-Prot
Match: sp|Q9SGE3|H2B2_ARATH (Histone H2B.2 OS=Arabidopsis thaliana OX=3702 GN=At1g08170 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 4.2e-27
Identity = 57/86 (66.28%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 1   RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAV 60
           RYV+KV+KQVHP++GI+ KAM ++N FM DMF+R+A EA +LS YT   TLSSREI+ AV
Sbjct: 153 RYVYKVMKQVHPDLGITSKAMTVVNMFMGDMFERIAQEAARLSDYTKRRTLSSREIEAAV 212

Query: 61  RLVLPGELGKHAIAEGTKAVSAYVSY 87
           RLVLPGEL +HA+AEG+KAVS +V Y
Sbjct: 213 RLVLPGELSRHAVAEGSKAVSNFVGY 238

[Close]

BLAST of Bhi08G000108 vs. Swiss-Prot
Match: sp|Q9ZUS0|H2B4_ARATH (Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3)

HSP 1 Score: 119.4 bits (298), Expect = 2.1e-26
Identity = 55/84 (65.48%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 2   YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVR 61
           Y+FKVLKQVHP++GISGKAM I+N+F+ND+F++LA E++KL++Y    T++SREIQ AVR
Sbjct: 55  YIFKVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR 114

Query: 62  LVLPGELGKHAIAEGTKAVSAYVS 86
           LVLPGEL KHA++EGTKAV+ + S
Sbjct: 115 LVLPGELAKHAVSEGTKAVTKFTS 138

[Close]

BLAST of Bhi08G000108 vs. Swiss-Prot
Match: sp|P40283|H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 118.6 bits (296), Expect = 3.6e-26
Identity = 56/84 (66.67%), Postives = 73/84 (86.90%), Query Frame = 0


Query: 2   YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVR 61
           Y+FKVLKQVHP+IGIS KAM I+N+F+ND+F++LA EA+KL++Y    T++SREIQ AVR
Sbjct: 66  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVR 125

Query: 62  LVLPGELGKHAIAEGTKAVSAYVS 86
           LVLPGEL KHA++EGTKAV+ + S
Sbjct: 126 LVLPGELAKHAVSEGTKAVTKFTS 149

[Close]

BLAST of Bhi08G000108 vs. Swiss-Prot
Match: sp|Q9SI96|H2B3_ARATH (Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3)

HSP 1 Score: 118.6 bits (296), Expect = 3.6e-26
Identity = 56/84 (66.67%), Postives = 73/84 (86.90%), Query Frame = 0


Query: 2   YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVR 61
           Y+FKVLKQVHP+IGIS KAM I+N+F+ND+F++LA EA+KL++Y    T++SREIQ AVR
Sbjct: 67  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVR 126

Query: 62  LVLPGELGKHAIAEGTKAVSAYVS 86
           LVLPGEL KHA++EGTKAV+ + S
Sbjct: 127 LVLPGELAKHAVSEGTKAVTKFTS 150

[Close]

BLAST of Bhi08G000108 vs. Swiss-Prot
Match: sp|Q9LFF6|H2B8_ARATH (Histone H2B.8 OS=Arabidopsis thaliana OX=3702 GN=At3g53650 PE=1 SV=3)

HSP 1 Score: 118.6 bits (296), Expect = 3.6e-26
Identity = 55/84 (65.48%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 2   YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVR 61
           Y+FKVLKQVHP+IGISGKAM I+N+F+ND+F++LA E+++L++Y    T++SREIQ AVR
Sbjct: 54  YIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVR 113

Query: 62  LVLPGELGKHAIAEGTKAVSAYVS 86
           LVLPGEL KHA++EGTKAV+ + S
Sbjct: 114 LVLPGELSKHAVSEGTKAVTKFTS 137

[Close]

BLAST of Bhi08G000108 vs. TAIR10
Match: AT1G08170.1 (Histone superfamily protein)

HSP 1 Score: 121.7 bits (304), Expect = 2.3e-28
Identity = 57/86 (66.28%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 1   RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAV 60
           RYV+KV+KQVHP++GI+ KAM ++N FM DMF+R+A EA +LS YT   TLSSREI+ AV
Sbjct: 153 RYVYKVMKQVHPDLGITSKAMTVVNMFMGDMFERIAQEAARLSDYTKRRTLSSREIEAAV 212

Query: 61  RLVLPGELGKHAIAEGTKAVSAYVSY 87
           RLVLPGEL +HA+AEG+KAVS +V Y
Sbjct: 213 RLVLPGELSRHAVAEGSKAVSNFVGY 238

[Close]

BLAST of Bhi08G000108 vs. TAIR10
Match: AT2G37470.1 (Histone superfamily protein)

HSP 1 Score: 119.4 bits (298), Expect = 1.2e-27
Identity = 55/84 (65.48%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 2   YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVR 61
           Y+FKVLKQVHP++GISGKAM I+N+F+ND+F++LA E++KL++Y    T++SREIQ AVR
Sbjct: 55  YIFKVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVR 114

Query: 62  LVLPGELGKHAIAEGTKAVSAYVS 86
           LVLPGEL KHA++EGTKAV+ + S
Sbjct: 115 LVLPGELAKHAVSEGTKAVTKFTS 138

[Close]

BLAST of Bhi08G000108 vs. TAIR10
Match: AT2G28720.1 (Histone superfamily protein)

HSP 1 Score: 118.6 bits (296), Expect = 2.0e-27
Identity = 56/84 (66.67%), Postives = 73/84 (86.90%), Query Frame = 0


Query: 2   YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVR 61
           Y+FKVLKQVHP+IGIS KAM I+N+F+ND+F++LA EA+KL++Y    T++SREIQ AVR
Sbjct: 67  YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVR 126

Query: 62  LVLPGELGKHAIAEGTKAVSAYVS 86
           LVLPGEL KHA++EGTKAV+ + S
Sbjct: 127 LVLPGELAKHAVSEGTKAVTKFTS 150

[Close]

BLAST of Bhi08G000108 vs. TAIR10
Match: AT3G53650.1 (Histone superfamily protein)

HSP 1 Score: 118.6 bits (296), Expect = 2.0e-27
Identity = 55/84 (65.48%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 2   YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVR 61
           Y+FKVLKQVHP+IGISGKAM I+N+F+ND+F++LA E+++L++Y    T++SREIQ AVR
Sbjct: 54  YIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVR 113

Query: 62  LVLPGELGKHAIAEGTKAVSAYVS 86
           LVLPGEL KHA++EGTKAV+ + S
Sbjct: 114 LVLPGELSKHAVSEGTKAVTKFTS 137

[Close]

BLAST of Bhi08G000108 vs. TAIR10
Match: AT5G02570.1 (Histone superfamily protein)

HSP 1 Score: 118.6 bits (296), Expect = 2.0e-27
Identity = 55/84 (65.48%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 2   YVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVR 61
           Y+FKVLKQVHP+IGISGKAM I+N+F+ND+F++LA E+++L++Y    T++SREIQ AVR
Sbjct: 48  YIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVR 107

Query: 62  LVLPGELGKHAIAEGTKAVSAYVS 86
           LVLPGEL KHA++EGTKAV+ + S
Sbjct: 108 LVLPGELAKHAVSEGTKAVTKFTS 131

[Close]

BLAST of Bhi08G000108 vs. TrEMBL
Match: tr|A0A1S3CH74|A0A1S3CH74_CUCME (histone H2B type 1-A-like OS=Cucumis melo OX=3656 GN=LOC103500693 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.8e-36
Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 3   VFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRL 62
           VFKVLKQVHPEIGISG+AM+ILNNFMNDMFQRLA+EATKLSKYTGGMTLSSREIQGAVRL
Sbjct: 148 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 207

Query: 63  VLPGELGKHAIAEGTKAVSAYVSYVHTKT 92
           VLPGELGKHAIAEGTKAVS YVSY +  T
Sbjct: 208 VLPGELGKHAIAEGTKAVSNYVSYGNRTT 236

[Close]

BLAST of Bhi08G000108 vs. TrEMBL
Match: tr|A0A0A0LSH9|A0A0A0LSH9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G136770 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.3e-36
Identity = 80/89 (89.89%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 3   VFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRL 62
           VFKVLKQVHPE+GISG+AM+ILNNFMNDMFQRLA+EATKLSKYTGGMTLSSREIQGAVRL
Sbjct: 148 VFKVLKQVHPEVGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 207

Query: 63  VLPGELGKHAIAEGTKAVSAYVSYVHTKT 92
           VLPGELGKHAIAEGTKAVS YVSY +  T
Sbjct: 208 VLPGELGKHAIAEGTKAVSNYVSYGNRAT 236

[Close]

BLAST of Bhi08G000108 vs. TrEMBL
Match: tr|A0A1U8AWH0|A0A1U8AWH0_NELNU (late histone H2B.2.2-like OS=Nelumbo nucifera OX=4432 GN=LOC104604599 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.0e-30
Identity = 70/85 (82.35%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1   RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAV 60
           RYVF+VLKQVHP +GIS KAM +LN FMNDMF+RLA EAT+LS+YTG MTLSSREIQGAV
Sbjct: 140 RYVFRVLKQVHPGMGISSKAMAVLNGFMNDMFERLAGEATRLSQYTGKMTLSSREIQGAV 199

Query: 61  RLVLPGELGKHAIAEGTKAVSAYVS 86
           RLVLPGELGKHAIAEGTKAV+ Y+S
Sbjct: 200 RLVLPGELGKHAIAEGTKAVTNYMS 224

[Close]

BLAST of Bhi08G000108 vs. TrEMBL
Match: tr|A0A2I0LDQ3|A0A2I0LDQ3_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_000866 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.1e-30
Identity = 68/86 (79.07%), Postives = 78/86 (90.70%), Query Frame = 0


Query: 1   RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAV 60
           RYVFKVLKQVHP + ISG+AM +LN +MNDMF+RLADEA KLS+YTG +TLSSREIQGAV
Sbjct: 227 RYVFKVLKQVHPGMRISGQAMTVLNGYMNDMFERLADEAAKLSRYTGRLTLSSREIQGAV 286

Query: 61  RLVLPGELGKHAIAEGTKAVSAYVSY 87
           RLVLPGELG+HAIAEG KAVS Y+S+
Sbjct: 287 RLVLPGELGRHAIAEGAKAVSNYMSH 312

[Close]

BLAST of Bhi08G000108 vs. TrEMBL
Match: tr|A0A218WA44|A0A218WA44_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr025129 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.1e-30
Identity = 68/86 (79.07%), Postives = 78/86 (90.70%), Query Frame = 0


Query: 1   RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAV 60
           RYVFKVLKQVHP + ISG+AM +LN +MNDMF+RLADEA KLS+YTG +TLSSREIQGAV
Sbjct: 227 RYVFKVLKQVHPGMRISGQAMTVLNGYMNDMFERLADEAAKLSRYTGRLTLSSREIQGAV 286

Query: 61  RLVLPGELGKHAIAEGTKAVSAYVSY 87
           RLVLPGELG+HAIAEG KAVS Y+S+
Sbjct: 287 RLVLPGELGRHAIAEGAKAVSNYMSH 312

[Close]

BLAST of Bhi08G000108 vs. NCBI nr
Match: XP_011648456.1 (PREDICTED: histone H2B [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 3.8e-37
Identity = 82/91 (90.11%), Postives = 87/91 (95.60%), Query Frame = 0


Query: 1   RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAV 60
           RYVFKVLKQVHPE+GISG+AM+ILNNFMNDMFQRLA+EATKLSKYTGGMTLSSREIQGAV
Sbjct: 121 RYVFKVLKQVHPEVGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAV 180

Query: 61  RLVLPGELGKHAIAEGTKAVSAYVSYVHTKT 92
           RLVLPGELGKHAIAEGTKAVS YVSY +  T
Sbjct: 181 RLVLPGELGKHAIAEGTKAVSNYVSYGNRAT 211

[Close]

BLAST of Bhi08G000108 vs. NCBI nr
Match: XP_022937552.1 (histone H2B.6-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 160.6 bits (405), Expect = 2.5e-36
Identity = 78/91 (85.71%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 1   RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAV 60
           RYVFKVLKQVHPE+GISG+AMVILNN MNDMF+RLA+EATKLSKYTGG TLSSREIQGAV
Sbjct: 129 RYVFKVLKQVHPEVGISGQAMVILNNLMNDMFERLAEEATKLSKYTGGQTLSSREIQGAV 188

Query: 61  RLVLPGELGKHAIAEGTKAVSAYVSYVHTKT 92
           +LV PGELGKHA+AEGTKAVS YVSY H +T
Sbjct: 189 KLVFPGELGKHAVAEGTKAVSTYVSYDHRRT 219

[Close]

BLAST of Bhi08G000108 vs. NCBI nr
Match: XP_023537504.1 (histone H2B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.5 bits (402), Expect = 5.5e-36
Identity = 77/91 (84.62%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 1   RYVFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAV 60
           RYVF+VLKQVHPE+GISG+AMVILNN MNDMF+RLA+EATKLSKYTGG TLSSREIQGAV
Sbjct: 129 RYVFRVLKQVHPEVGISGQAMVILNNLMNDMFERLAEEATKLSKYTGGQTLSSREIQGAV 188

Query: 61  RLVLPGELGKHAIAEGTKAVSAYVSYVHTKT 92
           +LV PGELGKHA+AEGTKAVS YVSY H +T
Sbjct: 189 KLVFPGELGKHAVAEGTKAVSTYVSYDHRRT 219

[Close]

BLAST of Bhi08G000108 vs. NCBI nr
Match: XP_008462313.1 (PREDICTED: histone H2B type 1-A-like [Cucumis melo])

HSP 1 Score: 159.1 bits (401), Expect = 7.2e-36
Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 3   VFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRL 62
           VFKVLKQVHPEIGISG+AM+ILNNFMNDMFQRLA+EATKLSKYTGGMTLSSREIQGAVRL
Sbjct: 148 VFKVLKQVHPEIGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 207

Query: 63  VLPGELGKHAIAEGTKAVSAYVSYVHTKT 92
           VLPGELGKHAIAEGTKAVS YVSY +  T
Sbjct: 208 VLPGELGKHAIAEGTKAVSNYVSYGNRTT 236

[Close]

BLAST of Bhi08G000108 vs. NCBI nr
Match: KGN64870.1 (hypothetical protein Csa_1G136770 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 9.5e-36
Identity = 80/89 (89.89%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 3   VFKVLKQVHPEIGISGKAMVILNNFMNDMFQRLADEATKLSKYTGGMTLSSREIQGAVRL 62
           VFKVLKQVHPE+GISG+AM+ILNNFMNDMFQRLA+EATKLSKYTGGMTLSSREIQGAVRL
Sbjct: 148 VFKVLKQVHPEVGISGQAMLILNNFMNDMFQRLAEEATKLSKYTGGMTLSSREIQGAVRL 207

Query: 63  VLPGELGKHAIAEGTKAVSAYVSYVHTKT 92
           VLPGELGKHAIAEGTKAVS YVSY +  T
Sbjct: 208 VLPGELGKHAIAEGTKAVSNYVSYGNRAT 236

The following BLAST results are available for this feature:

BLAST of Bhi08G000108 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SGE3\|H2B2_ARATH	4.2e-27	66.28	Histone H2B.2 OS=Arabidopsis thaliana OX=3702 GN=At1g08170 PE=2 SV=1	[more]
sp\|Q9ZUS0\|H2B4_ARATH	2.1e-26	65.48	Histone H2B.4 OS=Arabidopsis thaliana OX=3702 GN=At2g37470 PE=1 SV=3	[more]
sp\|P40283\|H2B11_ARATH	3.6e-26	66.67	Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5	[more]
sp\|Q9SI96\|H2B3_ARATH	3.6e-26	66.67	Histone H2B.3 OS=Arabidopsis thaliana OX=3702 GN=At2g28720 PE=1 SV=3	[more]
sp\|Q9LFF6\|H2B8_ARATH	3.6e-26	65.48	Histone H2B.8 OS=Arabidopsis thaliana OX=3702 GN=At3g53650 PE=1 SV=3	[more]

BLAST of Bhi08G000108 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08170.1	2.3e-28	66.28	Histone superfamily protein	[more]
AT2G37470.1	1.2e-27	65.48	Histone superfamily protein	[more]
AT2G28720.1	2.0e-27	66.67	Histone superfamily protein	[more]
AT3G53650.1	2.0e-27	65.48	Histone superfamily protein	[more]
AT5G02570.1	2.0e-27	65.48	Histone superfamily protein	[more]

BLAST of Bhi08G000108 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CH74\|A0A1S3CH74_CUCME	4.8e-36	91.01	histone H2B type 1-A-like OS=Cucumis melo OX=3656 GN=LOC103500693 PE=3 SV=1	[more]
tr\|A0A0A0LSH9\|A0A0A0LSH9_CUCSA	6.3e-36	89.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G136770 PE=3 SV=1	[more]
tr\|A0A1U8AWH0\|A0A1U8AWH0_NELNU	1.0e-30	82.35	late histone H2B.2.2-like OS=Nelumbo nucifera OX=4432 GN=LOC104604599 PE=3 SV=1	[more]
tr\|A0A2I0LDQ3\|A0A2I0LDQ3_PUNGR	5.1e-30	79.07	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_000866 PE=3 SV=1	[more]
tr\|A0A218WA44\|A0A218WA44_PUNGR	5.1e-30	79.07	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr025129 PE=3 SV=1	[more]

BLAST of Bhi08G000108 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648456.1	3.8e-37	90.11	PREDICTED: histone H2B [Cucumis sativus]	[more]
XP_022937552.1	2.5e-36	85.71	histone H2B.6-like isoform X1 [Cucurbita moschata]	[more]
XP_023537504.1	5.5e-36	84.62	histone H2B-like [Cucurbita pepo subsp. pepo]	[more]
XP_008462313.1	7.2e-36	91.01	PREDICTED: histone H2B type 1-A-like [Cucumis melo]	[more]
KGN64870.1	9.5e-36	89.89	hypothetical protein Csa_1G136770 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046982	protein heterodimerization activity
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0000786	nucleosome

Vocabulary: **INTERPRO**
Term	Definition
IPR007125	Histone_H2A/H2B/H3
IPR009072	Histone-fold
IPR000558	Histone_H2B

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0008150	biological_process
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000788	nuclear nucleosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi08M000108	Bhi08M000108	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 70..83 score: 69.25 coord: 18..38 score: 54.47 coord: 57..70 score: 78.23 coord: 40..57 score: 46.4
IPR000558	Histone H2B	SMART	SM00427	h2b3	coord: 2..85 e-value: 8.3E-39 score: 144.9
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 1..87
IPR009072	Histone-fold	GENE3D	G3DSA:1.10.20.10		coord: 1..86 e-value: 8.0E-42 score: 144.2
IPR009072	Histone-fold	SUPERFAMILY	SSF47113	Histone-fold	coord: 2..85
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 2..62 e-value: 6.0E-13 score: 49.2
None	No IPR available	PANTHER	PTHR23428:SF50	HISTONE H2B	coord: 1..87

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi08G000108	Csa1G136770	Cucumber (Chinese Long) v2	cuwgoB049
Bhi08G000108	MELO3C004846	Melon (DHL92) v3.5.1	mewgoB174
Bhi08G000108	ClCG01G013960	Watermelon (Charleston Gray)	wcgwgoB243
Bhi08G000108	CSPI01G14070	Wild cucumber (PI 183967)	cpiwgoB049
Bhi08G000108	Cucsa.200320	Cucumber (Gy14) v1	cgywgoB422
Bhi08G000108	CmaCh12G008090	Cucurbita maxima (Rimu)	cmawgoB0220
Bhi08G000108	CmoCh12G008190	Cucurbita moschata (Rifu)	cmowgoB0214
Bhi08G000108	Lsi03G000660	Bottle gourd (USVL1VR-Ls)	lsiwgoB337
Bhi08G000108	Cp4.1LG07g06810	Cucurbita pepo (Zucchini)	cpewgoB1055
Bhi08G000108	CsGy1G014050	Cucumber (Gy14) v2	cgybwgoB046
Bhi08G000108	MELO3C004846.2	Melon (DHL92) v3.6.1	medwgoB176
Bhi08G000108	CsaV3_1G014270	Cucumber (Chinese Long) v3	cucwgoB051
Bhi08G000108	Cla001053	Watermelon (97103) v1	wgowmB514
Bhi08G000108	Cla97C01G012930	Watermelon (97103) v2	wgowmbB461

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi08G000108	Cucurbita maxima (Rimu)	cmawgoB0267
Bhi08G000108	Cucurbita moschata (Rifu)	cmowgoB0259
Bhi08G000108	Cucurbita pepo (Zucchini)	cpewgoB0636
Bhi08G000108	Cucurbita pepo (Zucchini)	cpewgoB1056
Bhi08G000108	Watermelon (97103) v1	wgowmB499
Bhi08G000108	Silver-seed gourd	carwgoB0216