Lsi09G009510 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G009510
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionStructural constituent of ribosome, putative
Locationchr09 : 12324487 .. 12325275 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAAGCAGAGCCAAACTCCAGTCGTCGAAGAAGAAGCAGTACCATTCTCAATTTCTGGACTCAAAGCCCTAATTTCTTCTGAAGAAGATCAAGAAAATGAAGGGCAATTAATGGAAGATCGAGTAATTCGCAGTATTGGAGTCGGCATTACCAGGTCAAATCTGTTGACTCATTCCTCTTCTTCTTTTTGTTCAATCAGATCTTGTAATTTCTTAATGGACGATTTGATCGGGACTGAGAGCGGCGTTTGCTTGACTTCGAATTCAGAAGAAATTGAAGAGAAATTACCTCATTTCGATTTCGATTGCCGTCATTATCGCACTAATCGCCACGATTTTACTGCGAAAAAGCAGTTTCCACCGCCGATTCCTTTTGTAGTACAAGCAGGGCATCGACCACGATCGCCATGGATCTTAACAAGATATTGCTCAAATAGAAGGTTGATTTTGAAACTGGAGAGAGTGACGCAACATCAGTCCTTGGAATCGCGCCGCGAAAATGGCCGTTTAATTCTCAATCTCGTACCGATAGACGATCAGGATCTTCAGTACTTCATCGAAGAGGATGAAGGAAATGAGGAGATCATCGAATCGATTGAATGCGAAGGAGGAGAAGATGAAGGTACAGATTCTGAAATTGCTTTCAAGAGTTTTACGTACGGCGGAGCGGGCGGCGGCGGTGGAGGAATAATGTTTTGTGGTGTAAATGGTAAATTTGAAGAACGACATGTCGTTCATGGACATTTTGGTTCGGCACCGCTTCGTCCGATGGGTACAGTTATGTGA

mRNA sequence

ATGCAAAAGCAGAGCCAAACTCCAGTCGTCGAAGAAGAAGCAGTACCATTCTCAATTTCTGGACTCAAAGCCCTAATTTCTTCTGAAGAAGATCAAGAAAATGAAGGGCAATTAATGGAAGATCGAGTAATTCGCAGTATTGGAGTCGGCATTACCAGGTCAAATCTGTTGACTCATTCCTCTTCTTCTTTTTGTTCAATCAGATCTTGTAATTTCTTAATGGACGATTTGATCGGGACTGAGAGCGGCGTTTGCTTGACTTCGAATTCAGAAGAAATTGAAGAGAAATTACCTCATTTCGATTTCGATTGCCGTCATTATCGCACTAATCGCCACGATTTTACTGCGAAAAAGCAGTTTCCACCGCCGATTCCTTTTGTAGTACAAGCAGGGCATCGACCACGATCGCCATGGATCTTAACAAGATATTGCTCAAATAGAAGGTTGATTTTGAAACTGGAGAGAGTGACGCAACATCAGTCCTTGGAATCGCGCCGCGAAAATGGCCGTTTAATTCTCAATCTCGTACCGATAGACGATCAGGATCTTCAGTACTTCATCGAAGAGGATGAAGGAAATGAGGAGATCATCGAATCGATTGAATGCGAAGGAGGAGAAGATGAAGGTACAGATTCTGAAATTGCTTTCAAGAGTTTTACGTACGGCGGAGCGGGCGGCGGCGGTGGAGGAATAATGTTTTGTGGTGTAAATGGTAAATTTGAAGAACGACATGTCGTTCATGGACATTTTGGTTCGGCACCGCTTCGTCCGATGGGTACAGTTATGTGA

Coding sequence (CDS)

ATGCAAAAGCAGAGCCAAACTCCAGTCGTCGAAGAAGAAGCAGTACCATTCTCAATTTCTGGACTCAAAGCCCTAATTTCTTCTGAAGAAGATCAAGAAAATGAAGGGCAATTAATGGAAGATCGAGTAATTCGCAGTATTGGAGTCGGCATTACCAGGTCAAATCTGTTGACTCATTCCTCTTCTTCTTTTTGTTCAATCAGATCTTGTAATTTCTTAATGGACGATTTGATCGGGACTGAGAGCGGCGTTTGCTTGACTTCGAATTCAGAAGAAATTGAAGAGAAATTACCTCATTTCGATTTCGATTGCCGTCATTATCGCACTAATCGCCACGATTTTACTGCGAAAAAGCAGTTTCCACCGCCGATTCCTTTTGTAGTACAAGCAGGGCATCGACCACGATCGCCATGGATCTTAACAAGATATTGCTCAAATAGAAGGTTGATTTTGAAACTGGAGAGAGTGACGCAACATCAGTCCTTGGAATCGCGCCGCGAAAATGGCCGTTTAATTCTCAATCTCGTACCGATAGACGATCAGGATCTTCAGTACTTCATCGAAGAGGATGAAGGAAATGAGGAGATCATCGAATCGATTGAATGCGAAGGAGGAGAAGATGAAGGTACAGATTCTGAAATTGCTTTCAAGAGTTTTACGTACGGCGGAGCGGGCGGCGGCGGTGGAGGAATAATGTTTTGTGGTGTAAATGGTAAATTTGAAGAACGACATGTCGTTCATGGACATTTTGGTTCGGCACCGCTTCGTCCGATGGGTACAGTTATGTGA

Protein sequence

MQKQSQTPVVEEEAVPFSISGLKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSEEIEEKLPHFDFDCRHYRTNRHDFTAKKQFPPPIPFVVQAGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDDQDLQYFIEEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTYGGAGGGGGGIMFCGVNGKFEERHVVHGHFGSAPLRPMGTVM
Homology
[Close]
BLAST of Lsi09G009510 vs. TrEMBL
Match: A0A0A0KRM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G409650 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 3.9e-93
Identity = 195/291 (67.01%), Postives = 221/291 (75.95%), Query Frame = 1 

Query: 1   MQKQSQTPVVEEEAVPFSISG-LKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTH 60
           +QK ++ P +    + FSISG LK+LISS++      Q  ED VIRS+G+ I RSNLLTH
Sbjct: 36  IQKHNRIPPL---LLSFSISGGLKSLISSKQ------QFTEDPVIRSVGLAIIRSNLLTH 95

Query: 61  SSSS---------------FCSIRSCNFLMDDLIGTESGVCLTSNSEEIEEKLPHFDFDC 120
           SSSS               F SIRSCNF MDDLIGTESGVCLTSNSEE+E    H DFDC
Sbjct: 96  SSSSSSSASSSSSSSSSFCFSSIRSCNFSMDDLIGTESGVCLTSNSEEME---THSDFDC 155

Query: 121 RHYRTNRHDF-------TAKKQFPPPIPFVV--QAGHRPRSPWILTRYCSNRRLILKLER 180
            +YRT+RH F         KKQFPPPIPF+    AG+RPRSPW+LTRY SNRRLILKLER
Sbjct: 156 PYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAAGNRPRSPWVLTRYYSNRRLILKLER 215

Query: 181 VTQHQSLESRRENGRLILNLVPIDDQD---LQYFIEEDEGNEEIIESIECEGGEDEGTDS 240
           VTQHQSLESRRENGRLILNLVPID++D    Q+ IEE EGNEEI+ESI+C+GGEDEGTDS
Sbjct: 216 VTQHQSLESRRENGRLILNLVPIDERDQDHFQHLIEEKEGNEEIVESIDCDGGEDEGTDS 275

Query: 241 EIAFKSFTYGG-AGGGGGGIMFCGVNGKFEERHVVHGHFGSAPLRPMGTVM 263
           EI+ +S+TYGG  GGGGGG+ FCG NG FEERHVVHGHFGSAPLRPMGTVM
Sbjct: 276 EISIRSYTYGGEGGGGGGGMTFCGANGNFEERHVVHGHFGSAPLRPMGTVM 314

[Close]
BLAST of Lsi09G009510 vs. TrEMBL
Match: B9H771_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16470g PE=4 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 5.2e-21
Identity = 62/161 (38.51%), Postives = 101/161 (62.73%), Query Frame = 1 

Query: 57  LTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSEEIEEKLPHFDFDCRHYRTNRHDFTA 116
           LT++SSS+ S   C+  +DDLIGTESGV + +N EE   ++   +    H    +  +  
Sbjct: 67  LTNNSSSYSS---CSSALDDLIGTESGVYMNANIEEETAQMEKLE-SYHHQYKRKQRYAT 126

Query: 117 KKQFPPPIPFVVQAGHRP-RSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNL 176
           +K++PPPIP + + G+ P   PWILTR+  + RL+L  ERV  H+  E++RENGRL+LN+
Sbjct: 127 RKKYPPPIPLLARTGNLPGHMPWILTRHYIDGRLVLVEERVKNHEYFEAQRENGRLVLNI 186

Query: 177 VPIDDQ-DLQYFIEEDEGNEEI--IESIECEGGEDEGTDSE 214
           VP+DD+    +F+ ++E  +E+  ++S+E    ++   D E
Sbjct: 187 VPLDDKITCSHFVSKNEEQKELQDVDSLEKNSDQEFDDDDE 223

[Close]
BLAST of Lsi09G009510 vs. TrEMBL
Match: B9RJE8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1033420 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.1e-18
Identity = 66/174 (37.93%), Postives = 98/174 (56.32%), Query Frame = 1 

Query: 43  VIRSIGVGITRSNLLTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSEEIEEKLPHFD- 102
           ++ S  +  T S+ L  S +      S + ++DDLIGTESGVCL S  EE    +   + 
Sbjct: 42  MLLSPSLSTTSSSSLFQSVADSSPYSSWSSMLDDLIGTESGVCLNSGIEERATIMWKHEA 101

Query: 103 -FDCRHYRTNRHDFTAKKQFPPPIPFVVQAGHRP-RSPWILTRYCSNRRLILKLERVTQH 162
            +   H + ++     +K++PP IP + + G+ P  +PWILTR+  N RLIL+ ER+  H
Sbjct: 102 GYHPNHGKRDQQQCEKRKRYPPTIPLLARTGNLPSHTPWILTRHYFNGRLILREERLEHH 161

Query: 163 QSLESRRENGRLILNLVPIDDQDLQYFIEEDEGNEEIIESIECEGGEDEGTDSE 214
           +  ES RENGRLIL L+ I   D+ Y  EE+E   + +E I+ E    E T+ E
Sbjct: 162 EYFESYRENGRLILKLIRIPFDDIAYDDEEEELELQELELIQ-EEKTQESTEEE 214

[Close]
BLAST of Lsi09G009510 vs. TrEMBL
Match: A0A067KKE3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12002 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.3e-15
Identity = 75/209 (35.89%), Postives = 111/209 (53.11%), Query Frame = 1 

Query: 20  SGLKALISSEEDQENEGQLMEDRVIR--SIGVGITRSNLLTHSSSSFCSIRSCNFLMDDL 79
           SGLK L+ S+ +  ++  +    +    S     T ++L    SSSFCS  S + ++DDL
Sbjct: 41  SGLKTLVYSQRESSSQFIVHSYTISPPPSSSSLSTSASLSMSLSSSFCS--SWSSMLDDL 100

Query: 80  IGTESGVCLTSNSEEIE----EKLPHFDFDCRHY-RTNRHDFTAKKQFPPPIPFVVQA-- 139
           IGT+SGV L  + EE E    EK+  +   C +  + N+     KK++PPPIP + +   
Sbjct: 101 IGTDSGVHLDPSEEEAEIPRMEKMEKYSNKCHNLGKRNQELCEMKKKYPPPIPLLARTSN 160

Query: 140 --GHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDD-------- 199
             GH PR   ILTR+  + RLIL+ E+V  H+  E+ RENG LIL LV ++D        
Sbjct: 161 LDGHMPR---ILTRHYCDGRLILREEKVKHHEYFEAYRENGTLILKLVQLNDTVECCHSC 220

[Close]
BLAST of Lsi09G009510 vs. TrEMBL
Match: M5XJE1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020391mg PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.2e-14
Identity = 69/182 (37.91%), Postives = 99/182 (54.40%), Query Frame = 1 

Query: 54  SNLLTHSSSSFCSIRSCNFLMDDLIGTESGV--CLTSNSEEIE--EKLPHFDFDCRHYR- 113
           S+ LT S     S+   +  MDDLIGT+SGV   LT   E++   +    F    R+   
Sbjct: 57  SSSLTSSCMLDSSLSWSSSAMDDLIGTDSGVPIMLTKEQEKLGFLKNTVEFSMSRRNEAK 116

Query: 114 -----TNRHDFTAKKQFPPPIPFVVQAGH-RPRSPWILTRYC--SNRRLILKLERVTQHQ 173
                T R     K+++PPPIP + Q G+ + R PWI T++   SN RL+LK ERV  H+
Sbjct: 117 STRSTTTRRSEKIKREYPPPIPLLAQTGNLQGRMPWIFTKHYDHSNGRLVLKGERVKHHE 176

Query: 174 SLESRRENGRLILNLVPID------DQDLQYFIEEDEGN---EEIIESIECEGGEDEGTD 214
             E+RRE+GRLILNLVP+D      D  L    EE+E     +E +++++ + GE E  D
Sbjct: 177 YFEARREDGRLILNLVPLDNALACFDSALTCCDEENEEELEMDEDLQTVDEDVGEVEEDD 236

[Close]
BLAST of Lsi09G009510 vs. TAIR10
Match: AT1G22110.1 (AT1G22110.1 structural constituent of ribosome)

HSP 1 Score: 74.7 bits (182), Expect = 9.4e-14
Identity = 55/177 (31.07%), Postives = 87/177 (49.15%), Query Frame = 1 

Query: 54  SNLLTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSE-------EIEEKLPHFDFDCRH 113
           S++L+ +SSS  S       + D IGTES   + S  E         E     F +  R 
Sbjct: 35  SSMLSRTSSSSSSA------VGDYIGTESCFDILSADEGNDVVSVASEPVKSRFRYGGRR 94

Query: 114 YRTNRHDFTAKKQFPPPIPFVVQAGHR-PRSPWILTRYC-SNRRLILKLERVTQHQSLES 173
                    A ++FPPPIP + Q G+  P  PW+L R   S+ RLIL+ E+V  H+   +
Sbjct: 95  REEREARAAAAREFPPPIPLLAQTGNLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRA 154

Query: 174 RRENGRLILNLVPIDD-------QDLQYFIEEDEGNEEIIESIECEGGEDEGTDSEI 215
            R NGRL L+LVP+DD       +   Y  +++E ++E  +  EC+  + +  + ++
Sbjct: 155 NRSNGRLTLHLVPLDDDVFDLPQEPSHYQSDDEEDDDECDDEDECDDDDQQEVEDDL 205

[Close]
BLAST of Lsi09G009510 vs. NCBI nr
Match: gi|700195845|gb|KGN51022.1| (hypothetical protein Csa_5G409650 [Cucumis sativus])

HSP 1 Score: 349.4 bits (895), Expect = 5.6e-93
Identity = 195/291 (67.01%), Postives = 221/291 (75.95%), Query Frame = 1 

Query: 1   MQKQSQTPVVEEEAVPFSISG-LKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTH 60
           +QK ++ P +    + FSISG LK+LISS++      Q  ED VIRS+G+ I RSNLLTH
Sbjct: 36  IQKHNRIPPL---LLSFSISGGLKSLISSKQ------QFTEDPVIRSVGLAIIRSNLLTH 95

Query: 61  SSSS---------------FCSIRSCNFLMDDLIGTESGVCLTSNSEEIEEKLPHFDFDC 120
           SSSS               F SIRSCNF MDDLIGTESGVCLTSNSEE+E    H DFDC
Sbjct: 96  SSSSSSSASSSSSSSSSFCFSSIRSCNFSMDDLIGTESGVCLTSNSEEME---THSDFDC 155

Query: 121 RHYRTNRHDF-------TAKKQFPPPIPFVV--QAGHRPRSPWILTRYCSNRRLILKLER 180
            +YRT+RH F         KKQFPPPIPF+    AG+RPRSPW+LTRY SNRRLILKLER
Sbjct: 156 PYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAAGNRPRSPWVLTRYYSNRRLILKLER 215

Query: 181 VTQHQSLESRRENGRLILNLVPIDDQD---LQYFIEEDEGNEEIIESIECEGGEDEGTDS 240
           VTQHQSLESRRENGRLILNLVPID++D    Q+ IEE EGNEEI+ESI+C+GGEDEGTDS
Sbjct: 216 VTQHQSLESRRENGRLILNLVPIDERDQDHFQHLIEEKEGNEEIVESIDCDGGEDEGTDS 275

Query: 241 EIAFKSFTYGG-AGGGGGGIMFCGVNGKFEERHVVHGHFGSAPLRPMGTVM 263
           EI+ +S+TYGG  GGGGGG+ FCG NG FEERHVVHGHFGSAPLRPMGTVM
Sbjct: 276 EISIRSYTYGGEGGGGGGGMTFCGANGNFEERHVVHGHFGSAPLRPMGTVM 314

[Close]
BLAST of Lsi09G009510 vs. NCBI nr
Match: gi|778702534|ref|XP_011655221.1| (PREDICTED: uncharacterized protein LOC105435501 [Cucumis sativus])

HSP 1 Score: 327.0 bits (837), Expect = 3.0e-86
Identity = 182/276 (65.94%), Postives = 208/276 (75.36%), Query Frame = 1 

Query: 1   MQKQSQTPVVEEEAVPFSISG-LKALISSEEDQENEGQLMEDRVIRSIGVGITRSNLLTH 60
           +QK ++ P +    + FSISG LK+LISS++      Q  ED VIRS+G+ I        
Sbjct: 36  IQKHNRIPPL---LLSFSISGGLKSLISSKQ------QFTEDPVIRSVGLAI-------- 95

Query: 61  SSSSFCSIRSCNFLMDDLIGTESGVCLTSNSEEIEEKLPHFDFDCRHYRTNRHDF----- 120
                  IRSCNF MDDLIGTESGVCLTSNSEE+E    H DFDC +YRT+RH F     
Sbjct: 96  -------IRSCNFSMDDLIGTESGVCLTSNSEEMET---HSDFDCPYYRTDRHHFILQNQ 155

Query: 121 --TAKKQFPPPIPFVVQ--AGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGR 180
               KKQFPPPIPF+    AG+RPRSPW+LTRY SNRRLILKLERVTQHQSLESRRENGR
Sbjct: 156 RCVLKKQFPPPIPFIATQAAGNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGR 215

Query: 181 LILNLVPIDDQD---LQYFIEEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTYGG-AGG 240
           LILNLVPID++D    Q+ IEE EGNEEI+ESI+C+GGEDEGTDSEI+ +S+TYGG  GG
Sbjct: 216 LILNLVPIDERDQDHFQHLIEEKEGNEEIVESIDCDGGEDEGTDSEISIRSYTYGGEGGG 275

Query: 241 GGGGIMFCGVNGKFEERHVVHGHFGSAPLRPMGTVM 263
           GGGG+ FCG NG FEERHVVHGHFGSAPLRPMGTVM
Sbjct: 276 GGGGMTFCGANGNFEERHVVHGHFGSAPLRPMGTVM 284

[Close]
BLAST of Lsi09G009510 vs. NCBI nr
Match: gi|659121100|ref|XP_008460499.1| (PREDICTED: uncharacterized protein LOC103499299 [Cucumis melo])

HSP 1 Score: 299.7 bits (766), Expect = 5.1e-78
Identity = 158/209 (75.60%), Postives = 171/209 (81.82%), Query Frame = 1 

Query: 74  MDDLIGTESGVCLTSNSEEIEEKLPHFDFDCRHYRTNRHDFTA-------KKQFPPPIPF 133
           MDDLIGTESGVCLTSNSEE+E    H DFDCR YRTNRH+F         KKQ+PPPIPF
Sbjct: 1   MDDLIGTESGVCLTSNSEEMET---HSDFDCRCYRTNRHNFALQNQRCMLKKQYPPPIPF 60

Query: 134 VVQ--AGHRPRSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDDQD-- 193
           +    AG+RPRSPWILTRY SNRRLILKLERVTQHQSLESRRENGRLILNLVPI+D+   
Sbjct: 61  IATQAAGNRPRSPWILTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIEDRQDH 120

Query: 194 LQYFIEEDEGNEEIIESIECEGGEDEGTDSEIAFKSFTY---------GGAGGGGGGIMF 253
           LQ+ IEE EG+EEI+ESIEC+GGEDEGTDSEI+FKS TY         GG GGGGGG+MF
Sbjct: 121 LQHLIEEKEGDEEIVESIECDGGEDEGTDSEISFKSCTYGGEGGGGGGGGGGGGGGGMMF 180

Query: 254 CGVNGKFEERHVVHGHFGSAPLRPMGTVM 263
           CGVNG FEERHVVHGH GSAPLRPMGTVM
Sbjct: 181 CGVNGNFEERHVVHGHLGSAPLRPMGTVM 206

[Close]
BLAST of Lsi09G009510 vs. NCBI nr
Match: gi|566171747|ref|XP_002306595.2| (hypothetical protein POPTR_0005s16470g [Populus trichocarpa])

HSP 1 Score: 109.8 bits (273), Expect = 7.5e-21
Identity = 62/161 (38.51%), Postives = 101/161 (62.73%), Query Frame = 1 

Query: 57  LTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSEEIEEKLPHFDFDCRHYRTNRHDFTA 116
           LT++SSS+ S   C+  +DDLIGTESGV + +N EE   ++   +    H    +  +  
Sbjct: 67  LTNNSSSYSS---CSSALDDLIGTESGVYMNANIEEETAQMEKLE-SYHHQYKRKQRYAT 126

Query: 117 KKQFPPPIPFVVQAGHRP-RSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLILNL 176
           +K++PPPIP + + G+ P   PWILTR+  + RL+L  ERV  H+  E++RENGRL+LN+
Sbjct: 127 RKKYPPPIPLLARTGNLPGHMPWILTRHYIDGRLVLVEERVKNHEYFEAQRENGRLVLNI 186

Query: 177 VPIDDQ-DLQYFIEEDEGNEEI--IESIECEGGEDEGTDSE 214
           VP+DD+    +F+ ++E  +E+  ++S+E    ++   D E
Sbjct: 187 VPLDDKITCSHFVSKNEEQKELQDVDSLEKNSDQEFDDDDE 223

[Close]
BLAST of Lsi09G009510 vs. NCBI nr
Match: gi|743932147|ref|XP_011010363.1| (PREDICTED: uncharacterized protein LOC105115219 [Populus euphratica])

HSP 1 Score: 102.4 bits (254), Expect = 1.2e-18
Identity = 62/161 (38.51%), Postives = 98/161 (60.87%), Query Frame = 1 

Query: 56  LLTHSSSSFCSIRSCNFLMDDLIGTESGVCLTSNSEEIEEKLPHFDFDCRHYRTNRHD-F 115
           LLT SSS      SC+  +DDLIGTESGV + +N   +EE       +  H++  R   +
Sbjct: 89  LLTSSSS----YSSCSSALDDLIGTESGVYMNANI--VEEAAQMEKLESYHHQDKRKQRY 148

Query: 116 TAKKQFPPPIPFVVQAGHRP-RSPWILTRYCSNRRLILKLERVTQHQSLESRRENGRLIL 175
             +K++PPPIP + + G+ P + PWILTR+  + RL+L  ERV   +  E++RENGRL+L
Sbjct: 149 ATRKKYPPPIPLLARTGNLPGQMPWILTRHYIDGRLVLVEERVKNREYFEAQRENGRLVL 208

Query: 176 NLVPIDDQDL-QYFIEEDEGNEEIIESIECEGGEDEGTDSE 214
           N+VP+DD+ +  +F+ ++E ++E+ +        D+  D E
Sbjct: 209 NIVPLDDKTICSHFVSKNEKDKELQDVDFLGKNSDQQFDEE 243

The following BLAST results are available for this feature:
BLAST of Lsi09G009510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi09G009510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRM2_CUCSA3.9e-9367.01Uncharacterized protein OS=Cucumis sativus GN=Csa_5G409650 PE=4 SV=1[more]
B9H771_POPTR5.2e-2138.51Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16470g PE=4 SV=2[more]
B9RJE8_RICCO4.1e-1837.93Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1033420 PE=4 SV=1[more]
A0A067KKE3_JATCU3.3e-1535.89Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12002 PE=4 SV=1[more]
M5XJE1_PRUPE1.2e-1437.91Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020391mg PE=4 SV=1[more]
BLAST of Lsi09G009510 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G22110.19.4e-1431.07 structural constituent of ribosome[more]
BLAST of Lsi09G009510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700195845|gb|KGN51022.1|5.6e-9367.01hypothetical protein Csa_5G409650 [Cucumis sativus][more]
gi|778702534|ref|XP_011655221.1|3.0e-8665.94PREDICTED: uncharacterized protein LOC105435501 [Cucumis sativus][more]
gi|659121100|ref|XP_008460499.1|5.1e-7875.60PREDICTED: uncharacterized protein LOC103499299 [Cucumis melo][more]
gi|566171747|ref|XP_002306595.2|7.5e-2138.51hypothetical protein POPTR_0005s16470g [Populus trichocarpa][more]
gi|743932147|ref|XP_011010363.1|1.2e-1838.51PREDICTED: uncharacterized protein LOC105115219 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021410FAF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005575 cellular_component
cellular_component GO:0005840 ribosome
molecular_function GO:0003674 molecular_function
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G009510.1Lsi09G009510.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021410The fantastic four familyPFAMPF11250FAFcoord: 119..175
score: 1.8
NoneNo IPR availablePANTHERPTHR33155FAMILY NOT NAMEDcoord: 18..216
score: 3.4
NoneNo IPR availablePANTHERPTHR33155:SF11SUBFAMILY NOT NAMEDcoord: 18..216
score: 3.4