CmaCh15G007300 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh15G007300
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionStructural constituent of ribosome, putative
LocationCma_Chr15 : 3535686 .. 3537450 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTGCAAGCTTAAGATAATCGTTTCATCGTTCTTCGGCTTCCTTCTCCACGCATCCAGTTTTAGGTTCCCCACGCAATTGCCAATTCAAAAGCAAGGTCCAGTTGTCGAAGCAGTACGATTTTCTATTTCTGGACTCAAAGCCCTAATTTCTTCTAAAGAAGAATACAAGAAATGGAAGATCGCGTCATTCGCACTTTTGGAATCGGCATTATTAGGTCAAAGCTGTTGAATCCTTCTTCTTCTTCTTCGATTGGATCTTGTAATTTGTTAATGGACGATTTGATTGGGACTGAGACCGCCGTTTCCTTGACTTCGAATACAGAGGAAACCGAAGAGAAATTAACTCACGCCTATTTCGATCGTCCTCATAATTGCAACAATTTCCACGGTTTTACCGAGCTAAATCAGCGATGTGTGCCGAAAAAGCAGTTTCCACCGCCAATTCCTTCTCTAGCTACACAGGCAGGGCAACAAACCCGGTCGCCATGGATTTTAACAAGATATTACTCCGATAGAAGGTTGATTTTGAAACTGGAAAGAGTCGGGAATCATCAGTCCATGGAATCGCACCGCGAAAATGGCCGTCTGATTCTCAATCTCGTACCGTCACCAGTACCGGGCGTCCATAATCAGGATCTCCAGTTCATCGAAGAGGACGAAGGAAATGAGGAGATCGACTCGATTGAAAGCGAAGGAGGAGAAGATTGTACAGTTCCTGAAATTTCTTCCGAGAGTTTTACATACGGCGGCGATGGCGTCGACAGCGGAGTGTTTTGTGATCGGAAACTGTTTTGTGGTGTAAATGGGAATTTAGAAGAACGACATGTCGTCCACGGACATTTTGACTCGACTCCTCTTCGTCCGATAGGTACAGTTATGTGATTTAGTAAAAGATGAGCGTGCAGATTTTTTGAAGTCTTTTTTCGACGTTTTTCTTTTTCTTTTAATTTTCAGTTTAACCAATAGAAATATTTCGGCTTTTAATTATTTTTTTTTAGCTAATTTTATTTTCAATTTAGTTTCTTGTATACATTTTTTCTTTTTCTCTTTTTTTAATTTCCTCTCCATTAGAAAATGTTAGAACTGCTTGTTAAACTCAATATTATTCTCTGATTACCATAATTATTCACCCACCAAAATAAATGGACGCAATTGACAAAATATAAAAATAAAAAATGTAATTTAACCTAATTTTGTATTACACCAATTTACATTATTATCATTAATCACTTTCTAAATATAAATTAAAAGAACAAAAGAATTATATGTTTTCGAGGTTATCTTTGGGCCTAATGGGCCTGCCAAAATAACACTGCAGTGGTATCCCTGAGCCCAATAAGCCCACAAATGAAATGAAGTGTTGAAGGCAATCTAGCCCGTTTGTGACTCCCCATCCATGGGCTAGGCCCACTAAGAAGATGGGAGAAAAGTGACATGGTTTCATTGCTTTCTCTTGGAAGGTATTTCATTTACTGTACAGAAAAAAGATTACATTTAAATATAAGAGAAGATCTATACTTAGATAATACTCTCTACCCACTGGTGAATGAATAGTTGCAGAAGCTTTCTTCTTATTTACACAAAACTGTTGCATTTTTCACTTGTGCAGATGACTCTACACGCTCGTAGCGGTTCGGTCCCTGGAGACAGTATTGTCTGTTGACATCGCTCTTGGAGCTATGATGCAGAAGGTCAAAGATGAGGCCTTTGTTGTCATATTTGACCTGAAATATAATTTCAACTTGTTAAAGAGACCACTCTAG

mRNA sequence

TTTTGCAAGCTTAAGATAATCGTTTCATCGTTCTTCGGCTTCCTTCTCCACGCATCCAGTTTTAGGTTCCCCACGCAATTGCCAATTCAAAAGCAAGGTCCAGTTGTCGAAGCAGTACGATTTTCTATTTCTGGACTCAAAGCCCTAATTTCTTCTAAAGAAGAATACAAGAAATGGAAGATCGCGTCATTCGCACTTTTGGAATCGGCATTATTAGGTCAAAGCTGTTGAATCCTTCTTCTTCTTCTTCGATTGGATCTTGTAATTTGTTAATGGACGATTTGATTGGGACTGAGACCGCCGTTTCCTTGACTTCGAATACAGAGGAAACCGAAGAGAAATTAACTCACGCCTATTTCGATCGTCCTCATAATTGCAACAATTTCCACGGTTTTACCGAGCTAAATCAGCGATGTGTGCCGAAAAAGCAGTTTCCACCGCCAATTCCTTCTCTAGCTACACAGGCAGGGCAACAAACCCGGTCGCCATGGATTTTAACAAGATATTACTCCGATAGAAGGTTGATTTTGAAACTGGAAAGAGTCGGGAATCATCAGTCCATGGAATCGCACCGCGAAAATGGCCGTCTGATTCTCAATCTCGTACCGTCACCAGTACCGGGCGTCCATAATCAGGATCTCCAGTTCATCGAAGAGGACGAAGGAAATGAGGAGATCGACTCGATTGAAAGCGAAGGAGGAGAAGATTGTACAGTTCCTGAAATTTCTTCCGAGAGTTTTACATACGGCGGCGATGGCGTCGACAGCGGAGTGTTTTGTGATCGGAAACTGTTTTGTGGTGTAAATGGGAATTTAGAAGAACGACATGTCGTCCACGGACATTTTGACTCGACTCCTCTTCGTCCGATAGCGGTTCGGTCCCTGGAGACAGTATTGTCTGTTGACATCGCTCTTGGAGCTATGATGCAGAAGGTCAAAGATGAGGCCTTTGTTGTCATATTTGACCTGAAATATAATTTCAACTTGTTAAAGAGACCACTCTAG

Coding sequence (CDS)

ATGGAAGATCGCGTCATTCGCACTTTTGGAATCGGCATTATTAGGTCAAAGCTGTTGAATCCTTCTTCTTCTTCTTCGATTGGATCTTGTAATTTGTTAATGGACGATTTGATTGGGACTGAGACCGCCGTTTCCTTGACTTCGAATACAGAGGAAACCGAAGAGAAATTAACTCACGCCTATTTCGATCGTCCTCATAATTGCAACAATTTCCACGGTTTTACCGAGCTAAATCAGCGATGTGTGCCGAAAAAGCAGTTTCCACCGCCAATTCCTTCTCTAGCTACACAGGCAGGGCAACAAACCCGGTCGCCATGGATTTTAACAAGATATTACTCCGATAGAAGGTTGATTTTGAAACTGGAAAGAGTCGGGAATCATCAGTCCATGGAATCGCACCGCGAAAATGGCCGTCTGATTCTCAATCTCGTACCGTCACCAGTACCGGGCGTCCATAATCAGGATCTCCAGTTCATCGAAGAGGACGAAGGAAATGAGGAGATCGACTCGATTGAAAGCGAAGGAGGAGAAGATTGTACAGTTCCTGAAATTTCTTCCGAGAGTTTTACATACGGCGGCGATGGCGTCGACAGCGGAGTGTTTTGTGATCGGAAACTGTTTTGTGGTGTAAATGGGAATTTAGAAGAACGACATGTCGTCCACGGACATTTTGACTCGACTCCTCTTCGTCCGATAGCGGTTCGGTCCCTGGAGACAGTATTGTCTGTTGACATCGCTCTTGGAGCTATGATGCAGAAGGTCAAAGATGAGGCCTTTGTTGTCATATTTGACCTGAAATATAATTTCAACTTGTTAAAGAGACCACTCTAG

Protein sequence

MEDRVIRTFGIGIIRSKLLNPSSSSSIGSCNLLMDDLIGTETAVSLTSNTEETEEKLTHAYFDRPHNCNNFHGFTELNQRCVPKKQFPPPIPSLATQAGQQTRSPWILTRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVPSPVPGVHNQDLQFIEEDEGNEEIDSIESEGGEDCTVPEISSESFTYGGDGVDSGVFCDRKLFCGVNGNLEERHVVHGHFDSTPLRPIAVRSLETVLSVDIALGAMMQKVKDEAFVVIFDLKYNFNLLKRPL
Homology
[Close]
BLAST of CmaCh15G007300 vs. TrEMBL
Match: A0A0A0KRM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G409650 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.4e-61
Identity = 149/253 (58.89%), Postives = 168/253 (66.40%), Query Frame = 1 

Query: 2   EDRVIRTFGIGIIRSKLLNPSSSSS-----------------IGSCNLLMDDLIGTETAV 61
           ED VIR+ G+ IIRS LL  SSSSS                 I SCN  MDDLIGTE+ V
Sbjct: 67  EDPVIRSVGLAIIRSNLLTHSSSSSSSASSSSSSSSSFCFSSIRSCNFSMDDLIGTESGV 126

Query: 62  SLTSNTEETEEKLTHAYFDRPHNCNNFHGFTELNQRCVPKKQFPPPIPSLATQA-GQQTR 121
            LTSN+EE E   TH+ FD P+   + H F   NQRCV KKQFPPPIP +ATQA G + R
Sbjct: 127 CLTSNSEEME---THSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAAGNRPR 186

Query: 122 SPWILTRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVPSPVPGVHNQD--LQFIEE 181
           SPW+LTRYYS+RRLILKLERV  HQS+ES RENGRLILNLVP       +QD     IEE
Sbjct: 187 SPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPI---DERDQDHFQHLIEE 246

Query: 182 DEGNEEI-DSIESEGGED-CTVPEISSESFTYGGDGVDSGVFCDRKLFCGVNGNLEERHV 233
            EGNEEI +SI+ +GGED  T  EIS  S+TYGG+G   G       FCG NGN EERHV
Sbjct: 247 KEGNEEIVESIDCDGGEDEGTDSEISIRSYTYGGEGGGGG---GGMTFCGANGNFEERHV 306

[Close]
BLAST of CmaCh15G007300 vs. TrEMBL
Match: B9H771_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16470g PE=4 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 3.9e-19
Identity = 59/157 (37.58%), Postives = 89/157 (56.69%), Query Frame = 1 

Query: 22  SSSSSIGSCNLLMDDLIGTETAVSLTSNTEETEEKLTHAYFDRPHNCNNFHGFTELNQRC 81
           ++SSS  SC+  +DDLIGTE+ V + +N EE   ++            ++H   +  QR 
Sbjct: 69  NNSSSYSSCSSALDDLIGTESGVYMNANIEEETAQM--------EKLESYHHQYKRKQRY 128

Query: 82  VPKKQFPPPIPSLATQAGQQTRSPWILTRYYSDRRLILKLERVGNHQSMESHRENGRLIL 141
             +K++PPPIP LA         PWILTR+Y D RL+L  ERV NH+  E+ RENGRL+L
Sbjct: 129 ATRKKYPPPIPLLARTGNLPGHMPWILTRHYIDGRLVLVEERVKNHEYFEAQRENGRLVL 188

Query: 142 NLVPSPVPGVHNQDLQFIEEDEGNEEIDSIESEGGED 179
           N+VP       +  +   EE +  +++DS+E    ++
Sbjct: 189 NIVPLDDKITCSHFVSKNEEQKELQDVDSLEKNSDQE 217

[Close]
BLAST of CmaCh15G007300 vs. TrEMBL
Match: B9RJE8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1033420 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.9e-16
Identity = 63/167 (37.72%), Postives = 93/167 (55.69%), Query Frame = 1 

Query: 22  SSSSSIGSCNLLMDDLIGTETAVSLTSNTEETEEKL-THAYFDRPHNCNNFHGFTELNQR 81
           + SS   S + ++DDLIGTE+ V L S  EE    +  H     P+     HG  +  Q+
Sbjct: 61  ADSSPYSSWSSMLDDLIGTESGVCLNSGIEERATIMWKHEAGYHPN-----HGKRD-QQQ 120

Query: 82  CVPKKQFPPPIPSLATQAGQQTRSPWILTRYYSDRRLILKLERVGNHQSMESHRENGRLI 141
           C  +K++PP IP LA      + +PWILTR+Y + RLIL+ ER+ +H+  ES+RENGRLI
Sbjct: 121 CEKRKRYPPTIPLLARTGNLPSHTPWILTRHYFNGRLILREERLEHHEYFESYRENGRLI 180

Query: 142 LNLVPSPVPGVHNQDLQFIEEDEGNEEIDSIESEGGEDCTVPEISSE 188
           L L+  P   +   D    EE+   +E++ I+ E  ++ T  E   E
Sbjct: 181 LKLIRIPFDDIAYDD---EEEELELQELELIQEEKTQESTEEEEEEE 218

[Close]
BLAST of CmaCh15G007300 vs. TrEMBL
Match: A0A067KKE3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12002 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.0e-15
Identity = 64/162 (39.51%), Postives = 86/162 (53.09%), Query Frame = 1 

Query: 23  SSSSIGSCNLLMDDLIGTETAVSLTSNTEETEEKLTHAYFDRPHNCNNFHGFTELNQR-C 82
           SSS   S + ++DDLIGT++ V L  + EE E           + C   H   + NQ  C
Sbjct: 84  SSSFCSSWSSMLDDLIGTDSGVHLDPSEEEAEIPRMEKMEKYSNKC---HNLGKRNQELC 143

Query: 83  VPKKQFPPPIPSLATQAGQQTRSPWILTRYYSDRRLILKLERVGNHQSMESHRENGRLIL 142
             KK++PPPIP LA  +      P ILTR+Y D RLIL+ E+V +H+  E++RENG LIL
Sbjct: 144 EMKKKYPPPIPLLARTSNLDGHMPRILTRHYCDGRLILREEKVKHHEYFEAYRENGTLIL 203

Query: 143 NLVP--SPVPGVHN-----------QDLQFIEEDEGNEEIDS 171
            LV     V   H+           QDLQ +EED   E+ +S
Sbjct: 204 KLVQLNDTVECCHSCNCEKKEEIEMQDLQLMEEDGSQEDQES 242

[Close]
BLAST of CmaCh15G007300 vs. TrEMBL
Match: A0A067KLR6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12001 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.3e-14
Identity = 70/202 (34.65%), Postives = 94/202 (46.53%), Query Frame = 1 

Query: 24  SSSIGSCNLLMDDLIGTETAVSLTSNTE---ETEEKLTHAYFDRPHNCNNFHGFTELNQR 83
           SS     + L+ D IG E+ + L  N +    + +KL          CN           
Sbjct: 30  SSQDQKSSALIGDYIGVESCLDLEKNEDVFSSSSKKLETKILRNQRYCN----------- 89

Query: 84  CVPKKQFPPPIPSLATQAGQQTRSPWILTRYY-SDRRLILKLERVGNHQSMESHRENGRL 143
            + KK+FPPPIPSLA      +R PW+L RYY +D RLILK ERV +H+   +HR NGRL
Sbjct: 90  -IKKKEFPPPIPSLARTGNLPSRMPWVLRRYYTNDGRLILKEERVKHHEYFRAHRSNGRL 149

Query: 144 ILNLVP---SPVPGVHNQDLQFIEEDEGNEEIDSIES----EGGEDCTVPEISSESFTYG 203
            L LVP      P +   D +  EE+E  EE D  E     +G E+  +    SE    G
Sbjct: 150 TLQLVPLDDEVYPPLDYSDDEEEEEEEEEEEGDDDEKFEEIQGNENEPLENSCSEEEKEG 209

Query: 204 GDGVDSGVFCDRKLFCGVNGNL 215
               D    C      G++GN+
Sbjct: 210 EGEEDESDDCVGYYKSGISGNV 219

[Close]
BLAST of CmaCh15G007300 vs. TAIR10
Match: AT1G22110.1 (AT1G22110.1 structural constituent of ribosome)

HSP 1 Score: 61.6 bits (148), Expect = 8.7e-10
Identity = 51/168 (30.36%), Postives = 80/168 (47.62%), Query Frame = 1 

Query: 14  IRSKLLNPSSSSSIGSCNLLMDDLIGTETAVSLTSNTEETEEKLTHAYFDRPHNCNNFHG 73
           + S +L+ +SSSS  +    + D IGTE+   + S  E  +     +   +         
Sbjct: 33  VTSSMLSRTSSSSSSA----VGDYIGTESCFDILSADEGNDVVSVASEPVKSRFRYGGRR 92

Query: 74  FTELNQRCVPKKQFPPPIPSLATQAGQQTRSPWILTRYY-SDRRLILKLERVGNHQSMES 133
             E   R    ++FPPPIP LA         PW+L R   SD RLIL+ E+V +H+   +
Sbjct: 93  REEREARAAAAREFPPPIPLLAQTGNLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRA 152

Query: 134 HRENGRLILNLVP--SPVPGVHNQDLQFIEEDEGNEEIDSIESEGGED 179
           +R NGRL L+LVP    V  +  +   +  +DE +++    E E  +D
Sbjct: 153 NRSNGRLTLHLVPLDDDVFDLPQEPSHYQSDDEEDDDECDDEDECDDD 196

[Close]
BLAST of CmaCh15G007300 vs. NCBI nr
Match: gi|700195845|gb|KGN51022.1| (hypothetical protein Csa_5G409650 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 7.8e-61
Identity = 149/253 (58.89%), Postives = 168/253 (66.40%), Query Frame = 1 

Query: 2   EDRVIRTFGIGIIRSKLLNPSSSSS-----------------IGSCNLLMDDLIGTETAV 61
           ED VIR+ G+ IIRS LL  SSSSS                 I SCN  MDDLIGTE+ V
Sbjct: 67  EDPVIRSVGLAIIRSNLLTHSSSSSSSASSSSSSSSSFCFSSIRSCNFSMDDLIGTESGV 126

Query: 62  SLTSNTEETEEKLTHAYFDRPHNCNNFHGFTELNQRCVPKKQFPPPIPSLATQA-GQQTR 121
            LTSN+EE E   TH+ FD P+   + H F   NQRCV KKQFPPPIP +ATQA G + R
Sbjct: 127 CLTSNSEEME---THSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAAGNRPR 186

Query: 122 SPWILTRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVPSPVPGVHNQD--LQFIEE 181
           SPW+LTRYYS+RRLILKLERV  HQS+ES RENGRLILNLVP       +QD     IEE
Sbjct: 187 SPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPI---DERDQDHFQHLIEE 246

Query: 182 DEGNEEI-DSIESEGGED-CTVPEISSESFTYGGDGVDSGVFCDRKLFCGVNGNLEERHV 233
            EGNEEI +SI+ +GGED  T  EIS  S+TYGG+G   G       FCG NGN EERHV
Sbjct: 247 KEGNEEIVESIDCDGGEDEGTDSEISIRSYTYGGEGGGGG---GGMTFCGANGNFEERHV 306

[Close]
BLAST of CmaCh15G007300 vs. NCBI nr
Match: gi|778702534|ref|XP_011655221.1| (PREDICTED: uncharacterized protein LOC105435501 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 8.0e-58
Identity = 140/236 (59.32%), Postives = 159/236 (67.37%), Query Frame = 1 

Query: 2   EDRVIRTFGIGIIRSKLLNPSSSSSIGSCNLLMDDLIGTETAVSLTSNTEETEEKLTHAY 61
           ED VIR+ G+ IIRS             CN  MDDLIGTE+ V LTSN+EE E   TH+ 
Sbjct: 67  EDPVIRSVGLAIIRS-------------CNFSMDDLIGTESGVCLTSNSEEME---THSD 126

Query: 62  FDRPHNCNNFHGFTELNQRCVPKKQFPPPIPSLATQA-GQQTRSPWILTRYYSDRRLILK 121
           FD P+   + H F   NQRCV KKQFPPPIP +ATQA G + RSPW+LTRYYS+RRLILK
Sbjct: 127 FDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAAGNRPRSPWVLTRYYSNRRLILK 186

Query: 122 LERVGNHQSMESHRENGRLILNLVPSPVPGVHNQD--LQFIEEDEGNEEI-DSIESEGGE 181
           LERV  HQS+ES RENGRLILNLVP       +QD     IEE EGNEEI +SI+ +GGE
Sbjct: 187 LERVTQHQSLESRRENGRLILNLVPI---DERDQDHFQHLIEEKEGNEEIVESIDCDGGE 246

Query: 182 D-CTVPEISSESFTYGGDGVDSGVFCDRKLFCGVNGNLEERHVVHGHFDSTPLRPI 233
           D  T  EIS  S+TYGG+G   G       FCG NGN EERHVVHGHF S PLRP+
Sbjct: 247 DEGTDSEISIRSYTYGGEGGGGG---GGMTFCGANGNFEERHVVHGHFGSAPLRPM 280

[Close]
BLAST of CmaCh15G007300 vs. NCBI nr
Match: gi|659121100|ref|XP_008460499.1| (PREDICTED: uncharacterized protein LOC103499299 [Cucumis melo])

HSP 1 Score: 211.8 bits (538), Expect = 1.5e-51
Identity = 128/207 (61.84%), Postives = 144/207 (69.57%), Query Frame = 1 

Query: 34  MDDLIGTETAVSLTSNTEETEEKLTHAYFDRPHNCNNFHGFTELNQRCVPKKQFPPPIPS 93
           MDDLIGTE+ V LTSN+EE E   TH+ FD      N H F   NQRC+ KKQ+PPPIP 
Sbjct: 1   MDDLIGTESGVCLTSNSEEME---THSDFDCRCYRTNRHNFALQNQRCMLKKQYPPPIPF 60

Query: 94  LATQA-GQQTRSPWILTRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVPSPVPGVH 153
           +ATQA G + RSPWILTRYYS+RRLILKLERV  HQS+ES RENGRLILNLVP      H
Sbjct: 61  IATQAAGNRPRSPWILTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIEDRQDH 120

Query: 154 NQDLQFIEEDEGNEEI-DSIESEGGED-CTVPEISSESFTYGGD-----GVDSGVFCDRK 213
            Q L  IEE EG+EEI +SIE +GGED  T  EIS +S TYGG+     G   G      
Sbjct: 121 LQHL--IEEKEGDEEIVESIECDGGEDEGTDSEISFKSCTYGGEGGGGGGGGGGGGGGGM 180

Query: 214 LFCGVNGNLEERHVVHGHFDSTPLRPI 233
           +FCGVNGN EERHVVHGH  S PLRP+
Sbjct: 181 MFCGVNGNFEERHVVHGHLGSAPLRPM 202

[Close]
BLAST of CmaCh15G007300 vs. NCBI nr
Match: gi|566171747|ref|XP_002306595.2| (hypothetical protein POPTR_0005s16470g [Populus trichocarpa])

HSP 1 Score: 103.6 bits (257), Expect = 5.6e-19
Identity = 59/157 (37.58%), Postives = 89/157 (56.69%), Query Frame = 1 

Query: 22  SSSSSIGSCNLLMDDLIGTETAVSLTSNTEETEEKLTHAYFDRPHNCNNFHGFTELNQRC 81
           ++SSS  SC+  +DDLIGTE+ V + +N EE   ++            ++H   +  QR 
Sbjct: 69  NNSSSYSSCSSALDDLIGTESGVYMNANIEEETAQM--------EKLESYHHQYKRKQRY 128

Query: 82  VPKKQFPPPIPSLATQAGQQTRSPWILTRYYSDRRLILKLERVGNHQSMESHRENGRLIL 141
             +K++PPPIP LA         PWILTR+Y D RL+L  ERV NH+  E+ RENGRL+L
Sbjct: 129 ATRKKYPPPIPLLARTGNLPGHMPWILTRHYIDGRLVLVEERVKNHEYFEAQRENGRLVL 188

Query: 142 NLVPSPVPGVHNQDLQFIEEDEGNEEIDSIESEGGED 179
           N+VP       +  +   EE +  +++DS+E    ++
Sbjct: 189 NIVPLDDKITCSHFVSKNEEQKELQDVDSLEKNSDQE 217

[Close]
BLAST of CmaCh15G007300 vs. NCBI nr
Match: gi|743932147|ref|XP_011010363.1| (PREDICTED: uncharacterized protein LOC105115219 [Populus euphratica])

HSP 1 Score: 102.4 bits (254), Expect = 1.3e-18
Identity = 65/178 (36.52%), Postives = 89/178 (50.00%), Query Frame = 1 

Query: 22  SSSSSIGSCNLLMDDLIGTETAVSLTSNTEETEEKLTHAYFDRPHNCNNFHGFTELNQRC 81
           +SSSS  SC+  +DDLIGTE+ V + +N  E   ++            ++H   +  QR 
Sbjct: 91  TSSSSYSSCSSALDDLIGTESGVYMNANIVEEAAQM--------EKLESYHHQDKRKQRY 150

Query: 82  VPKKQFPPPIPSLATQAGQQTRSPWILTRYYSDRRLILKLERVGNHQSMESHRENGRLIL 141
             +K++PPPIP LA       + PWILTR+Y D RL+L  ERV N +  E+ RENGRL+L
Sbjct: 151 ATRKKYPPPIPLLARTGNLPGQMPWILTRHYIDGRLVLVEERVKNREYFEAQRENGRLVL 210

Query: 142 NLVPSPVPGV---------------------HNQDLQFIEEDEGNEEIDSIESEGGED 179
           N+VP     +                      N D QF EE+EG E    IE    +D
Sbjct: 211 NIVPLDDKTICSHFVSKNEKDKELQDVDFLGKNSDQQFDEEEEGREAYQDIELSSDDD 260

The following BLAST results are available for this feature:
BLAST of CmaCh15G007300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh15G007300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRM2_CUCSA5.4e-6158.89Uncharacterized protein OS=Cucumis sativus GN=Csa_5G409650 PE=4 SV=1[more]
B9H771_POPTR3.9e-1937.58Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16470g PE=4 SV=2[more]
B9RJE8_RICCO6.9e-1637.72Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1033420 PE=4 SV=1[more]
A0A067KKE3_JATCU2.0e-1539.51Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12002 PE=4 SV=1[more]
A0A067KLR6_JATCU1.3e-1434.65Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12001 PE=4 SV=1[more]
BLAST of CmaCh15G007300 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G22110.18.7e-1030.36 structural constituent of ribosome[more]
BLAST of CmaCh15G007300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700195845|gb|KGN51022.1|7.8e-6158.89hypothetical protein Csa_5G409650 [Cucumis sativus][more]
gi|778702534|ref|XP_011655221.1|8.0e-5859.32PREDICTED: uncharacterized protein LOC105435501 [Cucumis sativus][more]
gi|659121100|ref|XP_008460499.1|1.5e-5161.84PREDICTED: uncharacterized protein LOC103499299 [Cucumis melo][more]
gi|566171747|ref|XP_002306595.2|5.6e-1937.58hypothetical protein POPTR_0005s16470g [Populus trichocarpa][more]
gi|743932147|ref|XP_011010363.1|1.3e-1836.52PREDICTED: uncharacterized protein LOC105115219 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021410FAF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G007300.1CmaCh15G007300.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021410The fantastic four familyPFAMPF11250FAFcoord: 86..143
score: 2.3
NoneNo IPR availablePANTHERPTHR33155FAMILY NOT NAMEDcoord: 34..188
score: 8.6
NoneNo IPR availablePANTHERPTHR33155:SF11SUBFAMILY NOT NAMEDcoord: 34..188
score: 8.6
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..30
score: