CsGy5G014620 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G014620
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Structural constituent of ribosome, putative
Location	Chr5 : 20186699 .. 20187649 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTATTTCTCTGGCGGCCAACCCAACTTGTTTACCAAACTTAAGATAATCGTTTCATCCTTCTTCAATTTCCTTCTCTGTTCCTCCACTTTTCGTTTCCCCATCCAAAAGCACAACCGAATTCCACCACTACTACTTTCATTCTCTATTTCTGGAGGACTCAAATCACTCATTTCTTCCAAACAACAGTTCACGGAAGATCCAGTGATTCGCAGTGTTGGACTCGCCATTATCAGGTCCAATCTGTTGACTCATTCCTCTTCATCTTCCTCTTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTGTTTTTCTTCCATCAGATCTTGTAATTTCTCAATGGACGATTTGATCGGCACTGAGAGCGGTGTTTGTTTAACTTCAAATTCTGAAGAAATGGAAACTCACTCCGATTTCGATTGTCCTTATTATCGCACTGATCGACACCATTTCATTTTGCAAAATCAACGATGTGTGTTGAAAAAACAATTTCCACCGCCGATTCCTTTTATCGCAACACAGGCCGCAGGGAATCGACCTCGGTCGCCATGGGTCTTAACGAGATATTATTCAAATAGAAGATTGATTTTGAAACTGGAGAGAGTCACGCAACATCAGTCCTTAGAATCGCGCCGAGAAAATGGCCGTTTGATTCTGAATCTCGTGCCGATCGACGAACGTGATCAGGATCATTTTCAGCACTTAATCGAAGAGAAGGAAGGAAATGAGGAGATCGTCGAATCGATTGATTGTGATGGAGGAGAAGATGAAGGTACAGGCTCTGAAATTTCTATCAGGAGTTATACGTACGGCGGAGAAGGTGGTGGCGGTGGCGGAGGAATGACGTTTTGTGGTGCGAATGGTAATTTTGAAGAACGACATGTCGTTCATGGACATTTCGGTTCGGCGCCTCTTCGTCCGATGGGTACAGTTATGTGA

mRNA sequence

ATGGATTATTTCTCTGGCGGCCAACCCAACTTGTTTACCAAACTTAAGATAATCGTTTCATCCTTCTTCAATTTCCTTCTCTGTTCCTCCACTTTTCGTTTCCCCATCCAAAAGCACAACCGAATTCCACCACTACTACTTTCATTCTCTATTTCTGGAGGACTCAAATCACTCATTTCTTCCAAACAACAGTTCACGGAAGATCCAGTGATTCGCAGTGTTGGACTCGCCATTATCAGGTCCAATCTGTTGACTCATTCCTCTTCATCTTCCTCTTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTGTTTTTCTTCCATCAGATCTTGTAATTTCTCAATGGACGATTTGATCGGCACTGAGAGCGGTGTTTGTTTAACTTCAAATTCTGAAGAAATGGAAACTCACTCCGATTTCGATTGTCCTTATTATCGCACTGATCGACACCATTTCATTTTGCAAAATCAACGATGTGTGTTGAAAAAACAATTTCCACCGCCGATTCCTTTTATCGCAACACAGGCCGCAGGGAATCGACCTCGGTCGCCATGGGTCTTAACGAGATATTATTCAAATAGAAGATTGATTTTGAAACTGGAGAGAGTCACGCAACATCAGTCCTTAGAATCGCGCCGAGAAAATGGCCGTTTGATTCTGAATCTCGTGCCGATCGACGAACGTGATCAGGATCATTTTCAGCACTTAATCGAAGAGAAGGAAGGAAATGAGGAGATCGTCGAATCGATTGATTGTGATGGAGGAGAAGATGAAGGTACAGGCTCTGAAATTTCTATCAGGAGTTATACGTACGGCGGAGAAGGTGGTGGCGGTGGCGGAGGAATGACGTTTTGTGGTGCGAATGGTAATTTTGAAGAACGACATGTCGTTCATGGACATTTCGGTTCGGCGCCTCTTCGTCCGATGGGTACAGTTATGTGA

Coding sequence (CDS)

ATGGATTATTTCTCTGGCGGCCAACCCAACTTGTTTACCAAACTTAAGATAATCGTTTCATCCTTCTTCAATTTCCTTCTCTGTTCCTCCACTTTTCGTTTCCCCATCCAAAAGCACAACCGAATTCCACCACTACTACTTTCATTCTCTATTTCTGGAGGACTCAAATCACTCATTTCTTCCAAACAACAGTTCACGGAAGATCCAGTGATTCGCAGTGTTGGACTCGCCATTATCAGGTCCAATCTGTTGACTCATTCCTCTTCATCTTCCTCTTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTGTTTTTCTTCCATCAGATCTTGTAATTTCTCAATGGACGATTTGATCGGCACTGAGAGCGGTGTTTGTTTAACTTCAAATTCTGAAGAAATGGAAACTCACTCCGATTTCGATTGTCCTTATTATCGCACTGATCGACACCATTTCATTTTGCAAAATCAACGATGTGTGTTGAAAAAACAATTTCCACCGCCGATTCCTTTTATCGCAACACAGGCCGCAGGGAATCGACCTCGGTCGCCATGGGTCTTAACGAGATATTATTCAAATAGAAGATTGATTTTGAAACTGGAGAGAGTCACGCAACATCAGTCCTTAGAATCGCGCCGAGAAAATGGCCGTTTGATTCTGAATCTCGTGCCGATCGACGAACGTGATCAGGATCATTTTCAGCACTTAATCGAAGAGAAGGAAGGAAATGAGGAGATCGTCGAATCGATTGATTGTGATGGAGGAGAAGATGAAGGTACAGGCTCTGAAATTTCTATCAGGAGTTATACGTACGGCGGAGAAGGTGGTGGCGGTGGCGGAGGAATGACGTTTTGTGGTGCGAATGGTAATTTTGAAGAACGACATGTCGTTCATGGACATTTCGGTTCGGCGCCTCTTCGTCCGATGGGTACAGTTATGTGA

Protein sequence

MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLISSKQQFTEDPVIRSVGLAIIRSNLLTHSSSSSSSASSSSSSSSSSSFCFSSIRSCNFSMDDLIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAAGNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLIEEKEGNEEIVESIDCDGGEDEGTGSEISIRSYTYGGEGGGGGGGMTFCGANGNFEERHVVHGHFGSAPLRPMGTVM

Homology

[Close]

BLAST of CsGy5G014620 vs. NCBI nr
Match: KGN51022.1 (hypothetical protein Csa_5G409650 [Cucumis sativus])

HSP 1 Score: 550.4 bits (1417), Expect = 3.9e-153
Identity = 311/316 (98.42%), Postives = 311/316 (98.42%), Query Frame = 0


Query: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS 60
           MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS
Sbjct: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS 60

Query: 61  SKQQFTEDPVIRSVGLAIIRSNLLTHXXXXXXXXXXXXXXXXXXXXXFSSIRSCNFSMDD 120
           SKQQFTEDPVIRSVGLAIIRSNLLTH  XXXXXXXXXXXXXXXXXXXFSSIRSCNFSMDD
Sbjct: 61  SKQQFTEDPVIRSVGLAIIRSNLLTH--XXXXXXXXXXXXXXXXXXXFSSIRSCNFSMDD 120

Query: 121 LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA 180
           LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA
Sbjct: 121 LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA 180

Query: 181 GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI 240
           GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI
Sbjct: 181 GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI 240

Query: 241 EEKEGNEEIVESIDCDGGEDEGTGSEISIRSXXXXXXXXXXXXXXTFCGANGNFEERHVV 300
           EEKEGNEEIVESIDCDGGEDEGT SEISIRS  XXXXXXXXXXXXTFCGANGNFEERHVV
Sbjct: 241 EEKEGNEEIVESIDCDGGEDEGTDSEISIRSYTXXXXXXXXXXXXTFCGANGNFEERHVV 300

Query: 301 HGHFGSAPLRPMGTVM 317
           HGHFGSAPLRPMGTVM
Sbjct: 301 HGHFGSAPLRPMGTVM 314

[Close]

BLAST of CsGy5G014620 vs. NCBI nr
Match: XP_011655221.1 (PREDICTED: uncharacterized protein LOC105435501 [Cucumis sativus])

HSP 1 Score: 525.4 bits (1352), Expect = 1.3e-145
Identity = 281/316 (88.92%), Postives = 281/316 (88.92%), Query Frame = 0


Query: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS 60
           MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS
Sbjct: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS 60

Query: 61  SKQQFTEDPVIRSVGLAIIRSNLLTHXXXXXXXXXXXXXXXXXXXXXFSSIRSCNFSMDD 120
           SKQQFTEDPVIRSVGLAI                                IRSCNFSMDD
Sbjct: 61  SKQQFTEDPVIRSVGLAI--------------------------------IRSCNFSMDD 120

Query: 121 LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA 180
           LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA
Sbjct: 121 LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA 180

Query: 181 GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI 240
           GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI
Sbjct: 181 GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI 240

Query: 241 EEKEGNEEIVESIDCDGGEDEGTGSEISIRSXXXXXXXXXXXXXXTFCGANGNFEERHVV 300
           EEKEGNEEIVESIDCDGGEDEGT SEISIRS  XXXXXXXXXXXXTFCGANGNFEERHVV
Sbjct: 241 EEKEGNEEIVESIDCDGGEDEGTDSEISIRSYTXXXXXXXXXXXXTFCGANGNFEERHVV 284

Query: 301 HGHFGSAPLRPMGTVM 317
           HGHFGSAPLRPMGTVM
Sbjct: 301 HGHFGSAPLRPMGTVM 284

[Close]

BLAST of CsGy5G014620 vs. NCBI nr
Match: XP_016902558.1 (PREDICTED: uncharacterized protein LOC103499299 [Cucumis melo])

HSP 1 Score: 327.4 bits (838), Expect = 5.3e-86
Identity = 179/207 (86.47%), Postives = 189/207 (91.30%), Query Frame = 0


Query: 118 MDDLIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIAT 177
           MDDLIGTESGVCLTSNSEEMETHSDFDC  YRT+RH+F LQNQRC+LKKQ+PPPIPFIAT
Sbjct: 1   MDDLIGTESGVCLTSNSEEMETHSDFDCRCYRTNRHNFALQNQRCMLKKQYPPPIPFIAT 60

Query: 178 QAAGNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQ 237
           QAAGNRPRSPW+LTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPI++R QDH Q
Sbjct: 61  QAAGNRPRSPWILTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIEDR-QDHLQ 120

Query: 238 HLIEEKEGNEEIVESIDCDGGEDEGTGSEISIRS--------XXXXXXXXXXXXXXTFCG 297
           HLIEEKEG+EEIVESI+CDGGEDEGT SEIS +S        XXXXXXXXXXXXXX FCG
Sbjct: 121 HLIEEKEGDEEIVESIECDGGEDEGTDSEISFKSCTYGXXXXXXXXXXXXXXXXXXXFCG 180

Query: 298 ANGNFEERHVVHGHFGSAPLRPMGTVM 317
            NGNFEERHVVHGH GSAPLRPMGTVM
Sbjct: 181 VNGNFEERHVVHGHLGSAPLRPMGTVM 206

[Close]

BLAST of CsGy5G014620 vs. NCBI nr
Match: XP_023551345.1 (uncharacterized protein LOC111809192 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 262.3 bits (669), Expect = 2.1e-66
Identity = 196/335 (58.51%), Postives = 220/335 (65.67%), Query Frame = 0


Query: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRF----PIQKHNRIPPLLLSFSISGGLK 60
           MDYFS  +  LF K+KIIVSSFF FLL +S+FRF    PIQK   +    + FSIS GLK
Sbjct: 1   MDYFS-SKRYLFGKVKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVE-AVRFSIS-GLK 60

Query: 61  SLISSKQ------QFTEDPVIRSVGLAIIRSNLLTHXXXXXXXXXXXXXXXXXXXXXFSS 120
           +LISS++      Q  ED VIRS G+ II S     XXXXXXXXXXXXXXXXX       
Sbjct: 61  ALISSEEEHQEVGQEKEDRVIRSFGIGIISSKXXXXXXXXXXXXXXXXXXXXXG------ 120

Query: 121 IRSCNFSMDDLIGTESGVCLTSNSEEME---THSDFDCPYYRTDRHHFILQNQRCVLKKQ 180
             SCN  MDDLIGTESGV LT N+EE E   TH+ FD P    + H F  QNQRCV KKQ
Sbjct: 121 --SCNLLMDDLIGTESGVSLTENTEETEEKLTHAYFDRPRNCNNLHGFTEQNQRCVPKKQ 180

Query: 181 FPPPIPFIATQAAGNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVP 240
           FPPPIP +ATQ AG R RSPW+LTRYYS+RRLILKLERV  HQS+ES RENGRLILNLVP
Sbjct: 181 FPPPIPSLATQ-AGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVP 240

Query: 241 I---DERDQDHFQHLIEEKEGNEEIVESIDCDGGEDEGTGSEISIRS---XXXXXXXXXX 300
                  +QD     IEE EGNEEI +SI+ + GE++ T  EIS  S             
Sbjct: 241 SPVPGVHNQD--LQFIEEDEGNEEI-DSIETE-GEEDCTVPEISSESFTYGGEGVDGGVF 300

Query: 301 XXXXTFCGANGNFEERHVVHGHFGSAPLRPMGTVM 317
                FCG NGN EERHVVHGHF S PLRP+GTVM
Sbjct: 301 CDRKLFCGVNGNLEERHVVHGHFDSTPLRPIGTVM 319

[Close]

BLAST of CsGy5G014620 vs. NCBI nr
Match: XP_022939162.1 (uncharacterized protein LOC111445156 [Cucurbita moschata])

HSP 1 Score: 256.9 bits (655), Expect = 8.9e-65
Identity = 176/333 (52.85%), Postives = 199/333 (59.76%), Query Frame = 0


Query: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRF----PIQKHNRIPPLLLSFSISGGLK 60
           MDYFS  +  LF +LKIIVSSFF FLL +S+FRF    PIQK   +    + FSIS GLK
Sbjct: 1   MDYFS-TKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVE-AVRFSIS-GLK 60

Query: 61  SLISSKQ------QFTEDPVIRSVGLAIIRSNLLTHXXXXXXXXXXXXXXXXXXXXXFSS 120
           +LISS++      Q  ED VIRS G+ II S LLT                       SS
Sbjct: 61  ALISSQEEHQEVGQEKEDRVIRSFGIGIITSKLLT------------------PSSSSSS 120

Query: 121 IRSCNFSMDDLIGTESGVCLTSNSEEME---THSDFDCPYYRTDRHHFILQNQRCVLKKQ 180
           I SCN  MDDLIGTESGV LT N+EE E   TH+ FD P+  T+ H F  QNQRCV KKQ
Sbjct: 121 IGSCNLLMDDLIGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQ 180

Query: 181 FPPPIPFIATQAAGNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVP 240
           FPPPIP +ATQ AG R RSPW+LTRYYS+RRLILKLERV  HQS+ES RENGRLILNLVP
Sbjct: 181 FPPPIPSLATQ-AGQRTRSPWILTRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVP 240

Query: 241 -----IDERDQDHFQHLIEEKEGNEEIVESIDCDGGEDEGTGSEISIRS---XXXXXXXX 300
                +D +D       IEE EGNEE           ++ T  EIS  S           
Sbjct: 241 SPVPGVDNQD----LQFIEEDEGNEE--XXXXXXXXXEDYTVPEISSESFTYGGEGVDGG 300

Query: 301 XXXXXXTFCGANGNFEERHVVHGHFGSAPLRPM 313
                  FCG NGN EERHVVH HF S PLRP+
Sbjct: 301 VFCDRKLFCGVNGNLEERHVVHRHFDSTPLRPI 305

[Close]

BLAST of CsGy5G014620 vs. TAIR10
Match: AT1G22110.1 (structural constituent of ribosome)

HSP 1 Score: 61.2 bits (147), Expect = 1.3e-09
Identity = 45/131 (34.35%), Postives = 64/131 (48.85%), Query Frame = 0


Query: 117 SMDDLIGTESGVCLTSNSEEMETHSDFDCPY---YRTDRHHFILQNQRCVLKKQFPPPIP 176
           ++ D IGTES   + S  E  +  S    P    +R                ++FPPPIP
Sbjct: 48  AVGDYIGTESCFDILSADEGNDVVSVASEPVKSRFRYGGRRREXXXXXXXXAREFPPPIP 107

Query: 177 FIATQAAGNRPRSPWVLTRYY-SNRRLILKLERVTQHQSLESRRENGRLILNLVPIDE-- 236
            +A Q     P  PWVL R   S+ RLIL+ E+V  H+   + R NGRL L+LVP+D+  
Sbjct: 108 LLA-QTGNLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTLHLVPLDDDV 167

Query: 237 ----RDQDHFQ 238
               ++  H+Q
Sbjct: 168 FDLPQEPSHYQ 177

[Close]

BLAST of CsGy5G014620 vs. TrEMBL
Match: tr|A0A0A0KRM2|A0A0A0KRM2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G409650 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 2.6e-153
Identity = 311/316 (98.42%), Postives = 311/316 (98.42%), Query Frame = 0


Query: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS 60
           MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS
Sbjct: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS 60

Query: 61  SKQQFTEDPVIRSVGLAIIRSNLLTHXXXXXXXXXXXXXXXXXXXXXFSSIRSCNFSMDD 120
           SKQQFTEDPVIRSVGLAIIRSNLLTH  XXXXXXXXXXXXXXXXXXXFSSIRSCNFSMDD
Sbjct: 61  SKQQFTEDPVIRSVGLAIIRSNLLTH--XXXXXXXXXXXXXXXXXXXFSSIRSCNFSMDD 120

Query: 121 LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA 180
           LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA
Sbjct: 121 LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA 180

Query: 181 GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI 240
           GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI
Sbjct: 181 GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI 240

Query: 241 EEKEGNEEIVESIDCDGGEDEGTGSEISIRSXXXXXXXXXXXXXXTFCGANGNFEERHVV 300
           EEKEGNEEIVESIDCDGGEDEGT SEISIRS  XXXXXXXXXXXXTFCGANGNFEERHVV
Sbjct: 241 EEKEGNEEIVESIDCDGGEDEGTDSEISIRSYTXXXXXXXXXXXXTFCGANGNFEERHVV 300

Query: 301 HGHFGSAPLRPMGTVM 317
           HGHFGSAPLRPMGTVM
Sbjct: 301 HGHFGSAPLRPMGTVM 314

[Close]

BLAST of CsGy5G014620 vs. TrEMBL
Match: tr|A0A1S4E2W2|A0A1S4E2W2_CUCME (uncharacterized protein LOC103499299 OS=Cucumis melo OX=3656 GN=LOC103499299 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.5e-86
Identity = 179/207 (86.47%), Postives = 189/207 (91.30%), Query Frame = 0


Query: 118 MDDLIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIAT 177
           MDDLIGTESGVCLTSNSEEMETHSDFDC  YRT+RH+F LQNQRC+LKKQ+PPPIPFIAT
Sbjct: 1   MDDLIGTESGVCLTSNSEEMETHSDFDCRCYRTNRHNFALQNQRCMLKKQYPPPIPFIAT 60

Query: 178 QAAGNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQ 237
           QAAGNRPRSPW+LTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPI++R QDH Q
Sbjct: 61  QAAGNRPRSPWILTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIEDR-QDHLQ 120

Query: 238 HLIEEKEGNEEIVESIDCDGGEDEGTGSEISIRS--------XXXXXXXXXXXXXXTFCG 297
           HLIEEKEG+EEIVESI+CDGGEDEGT SEIS +S        XXXXXXXXXXXXXX FCG
Sbjct: 121 HLIEEKEGDEEIVESIECDGGEDEGTDSEISFKSCTYGXXXXXXXXXXXXXXXXXXXFCG 180

Query: 298 ANGNFEERHVVHGHFGSAPLRPMGTVM 317
            NGNFEERHVVHGH GSAPLRPMGTVM
Sbjct: 181 VNGNFEERHVVHGHLGSAPLRPMGTVM 206

[Close]

BLAST of CsGy5G014620 vs. TrEMBL
Match: tr|A0A1R3JH53|A0A1R3JH53_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16493 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 3.4e-20
Identity = 93/273 (34.07%), Postives = 132/273 (48.35%), Query Frame = 0


Query: 8   QPNLFTKLKIIVSSFFNFLLCSSTFRFP-------IQKHNRIPPLLLSFSIS-----GGL 67
           +  L  K K ++ S F+ ++  S  RFP       IQK     P   S++I       GL
Sbjct: 6   EDGLILKTKSMILSLFS-IMSGSFSRFPAAITPMQIQKQCSTTPSAASYNIEHLLLPAGL 65

Query: 68  KSLISSKQQFTEDP-VIRSVGLAIIRSNLLTHXXXXXXXXXXXXXXXXXXXXXFSSIRSC 127
           K+LI + Q  T +P ++ S  ++  RS                           SS  SC
Sbjct: 66  KTLIFTPQTQTPNPLILHSCTISKTRS----------PSSPDFQSLFRTLSTHSSSYSSC 125

Query: 128 NFSMDDLIGTESGVCLTSNSEEM-ETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIP 187
           +  MDD++GTESGV ++ N  ++ ET S        +      LQ     + +QFPP IP
Sbjct: 126 SSGMDDMLGTESGVYMSPNELQVPETES-------TSGNGKRKLQRGTNAMTRQFPPTIP 185

Query: 188 FIATQAAGNRP-RSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERD 247
            +A    GN P   PW+LTR+Y N RL+LK E+V  H+  E+ RENGRLIL LVP+D+  
Sbjct: 186 LLA--RTGNLPGHMPWILTRHYKNGRLVLKEEKVKHHEYFEAHRENGRLILQLVPLDDTV 245

Query: 248 QDHFQHLIEEKEGNEEIVESID----CDGGEDE 262
             H   + EE +GN+E VE  +    C G E +
Sbjct: 246 TCH-HTVYEEIDGNDEDVELEENIGFCQGDESD 257

[Close]

BLAST of CsGy5G014620 vs. TrEMBL
Match: tr|A0A2K2AHV4|A0A2K2AHV4_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G169900v3 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 9.8e-20
Identity = 65/149 (43.62%), Postives = 93/149 (62.42%), Query Frame = 0


Query: 109 SSIRSCNFSMDDLIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQF 168
           SS  SC+ ++DDLIGTESGV + +N EE ET        Y    HH   + QR   +K++
Sbjct: 72  SSYSSCSSALDDLIGTESGVYMNANIEE-ETAQMEKLESY----HHQYKRKQRYATRKKY 131

Query: 169 PPPIPFIATQAAGNRP-RSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVP 228
           PPPIP +A    GN P   PW+LTR+Y + RL+L  ERV  H+  E++RENGRL+LN+VP
Sbjct: 132 PPPIPLLA--RTGNLPGHMPWILTRHYIDGRLVLVEERVKNHEYFEAQRENGRLVLNIVP 191

Query: 229 IDERDQDHFQHLIEEKEGNEEI--VESID 255
           +D  D+    H + + E  +E+  V+S++
Sbjct: 192 LD--DKITCSHFVSKNEEEKELQDVDSLE 211

[Close]

BLAST of CsGy5G014620 vs. TrEMBL
Match: tr|A0A2C9WEC0|A0A2C9WEC0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G156700 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.1e-18
Identity = 61/117 (52.14%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 118 MDDLIGTESGVCLTSNSEEMETHSDFD---CPYYRTDRHHFILQNQRCVLKKQFPPPIPF 177
           +DD+IGTESGV L S SEE ET +  +    PY+R          Q C ++K++PPPIP 
Sbjct: 75  LDDVIGTESGVYLDSISEE-ETEARMEKLLQPYHRNLSKR---NQQPCEMRKKYPPPIPL 134

Query: 178 IATQAAGNRP-RSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDE 231
           +A    GN P   PW LTR+YSN RLILK +RV  H+  E+ RENGRLILNLVP+D+
Sbjct: 135 LA--RTGNLPGHMPWNLTRHYSNGRLILKEQRVKHHEYFEAYRENGRLILNLVPLDD 185

The following BLAST results are available for this feature:

BLAST of CsGy5G014620 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51022.1	3.9e-153	98.42	hypothetical protein Csa_5G409650 [Cucumis sativus]	[more]
XP_011655221.1	1.3e-145	88.92	PREDICTED: uncharacterized protein LOC105435501 [Cucumis sativus]	[more]
XP_016902558.1	5.3e-86	86.47	PREDICTED: uncharacterized protein LOC103499299 [Cucumis melo]	[more]
XP_023551345.1	2.1e-66	58.51	uncharacterized protein LOC111809192 [Cucurbita pepo subsp. pepo]	[more]
XP_022939162.1	8.9e-65	52.85	uncharacterized protein LOC111445156 [Cucurbita moschata]	[more]

BLAST of CsGy5G014620 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22110.1	1.3e-09	34.35	structural constituent of ribosome	[more]

BLAST of CsGy5G014620 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy5G014620 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KRM2\|A0A0A0KRM2_CUCSA	2.6e-153	98.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G409650 PE=4 SV=1	[more]
tr\|A0A1S4E2W2\|A0A1S4E2W2_CUCME	3.5e-86	86.47	uncharacterized protein LOC103499299 OS=Cucumis melo OX=3656 GN=LOC103499299 PE=...	[more]
tr\|A0A1R3JH53\|A0A1R3JH53_9ROSI	3.4e-20	34.07	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16493 PE=4 SV=1	[more]
tr\|A0A2K2AHV4\|A0A2K2AHV4_POPTR	9.8e-20	43.62	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G169900v3 PE=...	[more]
tr\|A0A2C9WEC0\|A0A2C9WEC0_MANES	4.1e-18	52.14	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G156700 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021410	FAF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G014620.1	CsGy5G014620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 167..225 e-value: 9.6E-13 score: 48.1
None	No IPR available	PANTHER	PTHR33155:SF12	F2E2.18	coord: 72..263
None	No IPR available	PANTHER	PTHR33155	FAMILY NOT NAMED	coord: 72..263

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G014620	Cla019783	Watermelon (97103) v1	cgybwmB357
CsGy5G014620	Csa5G409650	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G014620	MELO3C022817	Melon (DHL92) v3.5.1	cgybmeB294
CsGy5G014620	ClCG03G008900	Watermelon (Charleston Gray)	cgybwcgB349
CsGy5G014620	CSPI05G14700	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G014620	CmaCh04G023110	Cucurbita maxima (Rimu)	cgybcmaB676
CsGy5G014620	CmaCh15G007300	Cucurbita maxima (Rimu)	cgybcmaB600
CsGy5G014620	CmoCh04G024140	Cucurbita moschata (Rifu)	cgybcmoB654
CsGy5G014620	Lsi09G009510	Bottle gourd (USVL1VR-Ls)	cgyblsiB302
CsGy5G014620	Cp4.1LG01g20190	Cucurbita pepo (Zucchini)	cgybcpeB650
CsGy5G014620	Cp4.1LG13g05030	Cucurbita pepo (Zucchini)	cgybcpeB609
CsGy5G014620	MELO3C022817.2	Melon (DHL92) v3.6.1	cgybmedB294
CsGy5G014620	CsaV3_5G023830	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G014620	Cla97C03G060090	Watermelon (97103) v2	cgybwmbB354
CsGy5G014620	Bhi12G001094	Wax gourd	cgybwgoB428
CsGy5G014620	Carg18253	Silver-seed gourd	carcgybB0533
CsGy5G014620	Carg01478	Silver-seed gourd	carcgybB0819

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G014620	Cucurbita moschata (Rifu)	cgybcmoB574