Cp4.1LG01g20190 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g20190
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Unknown protein
Location	Cp4.1LG01 : 17107619 .. 17108515 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTATTTCTCTGGCGAACGCAGCTTTTTTTCAGAGGTTAAGGTAATCGTTTCGTCTTTCTTAGGCTTCCTGCTCTGCGCAACGAGTTTTCGGTTCCCCATGCAAAATCAGAATCAATGTCCAGTAATCGAAACTGTACGATCCTCGATTTCTGGACTCAAAGCCCTAATTTCTTTGGAAGAAGGAAAAGGAAAGGAAGAACGAGTCATTCGCGGTGTTGGAATCGGCATTATCAGGTCAAAATTGTCGACTAATTCTTCTTCTTCTTCTTTTTGTAATTCCATCAGATCTTTTAATTTTTTAATGGACGATTTGATCGGAACTGAGAGCGGAGTTTGCTTGACTTCGAATGCTGGAGAAATCGAAGAGAAAGTAACTCGCTCTGATTCCGATTTTTCTAATAATCGCGTTAATCGTCGCGATTTGTTGAAAAAGGAGTTTCCTCCACCGATTCCTTTCCTAGAGGCACTGGCAGGGCATCGAATTCGACCGCCGTGGATTTTAACGAGAAATTGCATCGACGGAAGGTTGATTTTGAATCTGGAGAGAGTGAGGCATCATCAATCCTTGGAATCGCACCGTGAAAATGGCCGTTTAATTCTCAATCTCGTTCCGGCGAATGTCGCCGGCGTCGGTACAGAGGATGAGGATGATCAGGATCTTCAGTTCATCGAAGATGCCGAAGAAGAAGAGAAGATCAAAGAATCGGTTGAATGCGAAGAAGGCGACGATCCTGAATATGGTTTTAAGAGTTTTCCGTTCGGCGGAGGTGGAGGCGGAGGCAGAATGGTTTGCGATCGGGGACCGTTTTGTGGTGTAAATGGGAATTTAGGAGAACGACACGTCGTCCATGGACATTTCGGTTCGGCTCCTCTTCGTTCGATGGGTACAGTT

mRNA sequence

ATGGGGTATTTCTCTGGCGAACGCAGCTTTTTTTCAGAGGTTAAGGTAATCGTTTCGTCTTTCTTAGGCTTCCTGCTCTGCGCAACGAGTTTTCGGTTCCCCATGCAAAATCAGAATCAATGTCCAGTAATCGAAACTGAGTTTCCTCCACCGATTCCTTTCCTAGAGGCACTGGCAGGGCATCGAATTCGACCGCCGTGGATTTTAACGAGAAATTGCATCGACGGAAGGTTGATTTTGAATCTGGAGAGAGTGAGGCATCATCAATCCTTGGAATCGCACCGTGAAAATGGCCGTTTAATTCTCAATCTCGTTCCGGCGAATGTCGCCGGCGTCGGTACAGAGGATGAGGATGATCAGGATCTTCAGTTCATCGAAGATGCCGAAGAAGAAGAGAAGATCAAAGAATCGGTTGAATGCGAAGAAGGCGACGATCCTGAATATGGTTTTAAGAGTTTTCCGTTCGGCGGAGGTGGAGGCGGAGGCAGAATGGTTTGCGATCGGGGACCGTTTTGTGGTGTAAATGGGAATTTAGGAGAACGACACGTCGTCCATGGACATTTCGGTTCGGCTCCTCTTCGTTCGATGGGTACAGTT

Coding sequence (CDS)

ATGGGGTATTTCTCTGGCGAACGCAGCTTTTTTTCAGAGGTTAAGGTAATCGTTTCGTCTTTCTTAGGCTTCCTGCTCTGCGCAACGAGTTTTCGGTTCCCCATGCAAAATCAGAATCAATGTCCAGTAATCGAAACTGAGTTTCCTCCACCGATTCCTTTCCTAGAGGCACTGGCAGGGCATCGAATTCGACCGCCGTGGATTTTAACGAGAAATTGCATCGACGGAAGGTTGATTTTGAATCTGGAGAGAGTGAGGCATCATCAATCCTTGGAATCGCACCGTGAAAATGGCCGTTTAATTCTCAATCTCGTTCCGGCGAATGTCGCCGGCGTCGGTACAGAGGATGAGGATGATCAGGATCTTCAGTTCATCGAAGATGCCGAAGAAGAAGAGAAGATCAAAGAATCGGTTGAATGCGAAGAAGGCGACGATCCTGAATATGGTTTTAAGAGTTTTCCGTTCGGCGGAGGTGGAGGCGGAGGCAGAATGGTTTGCGATCGGGGACCGTTTTGTGGTGTAAATGGGAATTTAGGAGAACGACACGTCGTCCATGGACATTTCGGTTCGGCTCCTCTTCGTTCGATGGGTACAGTT

Protein sequence

MGYFSGERSFFSEVKVIVSSFLGFLLCATSFRFPMQNQNQCPVIETEFPPPIPFLEALAGHRIRPPWILTRNCIDGRLILNLERVRHHQSLESHRENGRLILNLVPANVAGVGTEDEDDQDLQFIEDAEEEEKIKESVECEEGDDPEYGFKSFPFGGGGGGGRMVCDRGPFCGVNGNLGERHVVHGHFGSAPLRSMGTV

Homology

[Close]

BLAST of Cp4.1LG01g20190 vs. TrEMBL
Match: A0A0A0KRM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G409650 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.8e-37
Identity = 97/171 (56.73%), Postives = 112/171 (65.50%), Query Frame = 1


Query: 38  QNQCPVIETEFPPPIPFLEA-LAGHRIRPPWILTRNCIDGRLILNLERVRHHQSLESHRE 97
           QNQ  V++ +FPPPIPF+    AG+R R PW+LTR   + RLIL LERV  HQSLES RE
Sbjct: 156 QNQRCVLKKQFPPPIPFIATQAAGNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRE 215

Query: 98  NGRLILNLVPANVAGVGTEDEDDQD--LQFIEDAEEEEKIKESVEC----EEGDDPEYGF 157
           NGRLILNLVP         DE DQD     IE+ E  E+I ES++C    +EG D E   
Sbjct: 216 NGRLILNLVPI--------DERDQDHFQHLIEEKEGNEEIVESIDCDGGEDEGTDSEISI 275

Query: 158 KSFPFG--GGGGGGRMVCDRGPFCGVNGNLGERHVVHGHFGSAPLRSMGTV 200
           +S+ +G  GGGGGG M      FCG NGN  ERHVVHGHFGSAPLR MGTV
Sbjct: 276 RSYTYGGEGGGGGGGMT-----FCGANGNFEERHVVHGHFGSAPLRPMGTV 313

[Close]

BLAST of Cp4.1LG01g20190 vs. TrEMBL
Match: A0A067KLR6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12001 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.4e-13
Identity = 52/114 (45.61%), Postives = 65/114 (57.02%), Query Frame = 1


Query: 35  MQNQNQCPVIETEFPPPIPFLEALAGHRIRPPWILTRNCI-DGRLILNLERVRHHQSLES 94
           ++NQ  C + + EFPPPIP L        R PW+L R    DGRLIL  ERV+HH+   +
Sbjct: 71  LRNQRYCNIKKKEFPPPIPSLARTGNLPSRMPWVLRRYYTNDGRLILKEERVKHHEYFRA 130

Query: 95  HRENGRLILNLVPANVAGVGTEDEDDQDLQFIEDAEEEEKIKESVECEEGDDPE 148
           HR NGRL L LVP        +DE    L + +D EEEE+ +E    EEGDD E
Sbjct: 131 HRSNGRLTLQLVP-------LDDEVYPPLDYSDDEEEEEEEEE----EEGDDDE 173

[Close]

BLAST of Cp4.1LG01g20190 vs. TrEMBL
Match: B9RJE8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1033420 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.4e-12
Identity = 47/113 (41.59%), Postives = 68/113 (60.18%), Query Frame = 1


Query: 36  QNQNQCPVIETEFPPPIPFLEALAGHRIRPPWILTRNCIDGRLILNLERVRHHQSLESHR 95
           ++Q QC      +PP IP L          PWILTR+  +GRLIL  ER+ HH+  ES+R
Sbjct: 110 RDQQQCEK-RKRYPPTIPLLARTGNLPSHTPWILTRHYFNGRLILREERLEHHEYFESYR 169

Query: 96  ENGRLILNLVPANVAGVGTEDEDDQ-DLQFIEDAEEEEKIKESVECEEGDDPE 148
           ENGRLIL L+      +  +DE+++ +LQ +E   +EEK +ES E EE ++ +
Sbjct: 170 ENGRLILKLIRIPFDDIAYDDEEEELELQELE-LIQEEKTQESTEEEEEEEED 220

[Close]

BLAST of Cp4.1LG01g20190 vs. TrEMBL
Match: M1CMR7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027533 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-10
Identity = 54/148 (36.49%), Postives = 77/148 (52.03%), Query Frame = 1


Query: 33  FPMQNQNQCPVIETEFPPPIPFLEALAG-HRIRPPWILTR-NCIDGRLILNLERVRHHQS 92
           F ++ + +   IE E+PPPIP L         + PW++ R +  DGRLI+  E+V+  + 
Sbjct: 39  FGLRKEKKKVKIEREYPPPIPGLAKTENVPSSQMPWVMKRYHTSDGRLIIKEEKVKRFEY 98

Query: 93  LESHRENGRLILNLVPANVAGVGTEDEDDQDLQFIEDAEEEEKIKESVECEEGD----DP 152
            E+HR  GRL+LNL+P N   VG  D+DD       DA +   + E   C++G+     P
Sbjct: 99  FETHRTEGRLMLNLIPLN-DNVGDSDDDD-------DAADGGDVVEKDGCDQGEIDRTAP 158

Query: 153 EYGFKSFPFGGGGGGGRMVCDRGPFCGV 175
           E    +   GGGGGGG  V   G   GV
Sbjct: 159 EESESALVNGGGGGGGGAVIGGGGSGGV 178

[Close]

BLAST of Cp4.1LG01g20190 vs. TrEMBL
Match: M5XJE1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020391mg PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-10
Identity = 51/144 (35.42%), Postives = 77/144 (53.47%), Query Frame = 1


Query: 22  LGFLLCATSFRFPMQNQ---------NQCPVIETEFPPPIPFLEALAGHRIRPPWILTRN 81
           LGFL     F    +N+          +   I+ E+PPPIP L      + R PWI T++
Sbjct: 98  LGFLKNTVEFSMSRRNEAKSTRSTTTRRSEKIKREYPPPIPLLAQTGNLQGRMPWIFTKH 157

Query: 82  C--IDGRLILNLERVRHHQSLESHRENGRLILNLVPA-------NVAGVGTEDEDDQDLQ 141
               +GRL+L  ERV+HH+  E+ RE+GRLILNLVP        + A    ++E++++L+
Sbjct: 158 YDHSNGRLVLKGERVKHHEYFEARREDGRLILNLVPLDNALACFDSALTCCDEENEEELE 217

Query: 142 FIEDAEEEEKIKESVECEEGDDPE 148
             ED +  +  ++  E EE DD E
Sbjct: 218 MDEDLQTVD--EDVGEVEEDDDDE 239

[Close]

BLAST of Cp4.1LG01g20190 vs. TAIR10
Match: AT1G22110.1 (AT1G22110.1 structural constituent of ribosome)

HSP 1 Score: 64.7 bits (156), Expect = 7.4e-11
Identity = 41/104 (39.42%), Postives = 57/104 (54.81%), Query Frame = 1


Query: 47  EFPPPIPFLEALAGHRIRPPWILTRNCI-DGRLILNLERVRHHQSLESHRENGRLILNLV 106
           EFPPPIP L          PW+L R    DGRLIL  E+VRHH+   ++R NGRL L+LV
Sbjct: 101 EFPPPIPLLAQTGNLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTLHLV 160

Query: 107 PA--NVAGVGTEDEDDQDLQFIEDAEEEEKIKESVECEEGDDPE 148
           P   +V  +  E    Q     +D E++++  +  EC++ D  E
Sbjct: 161 PLDDDVFDLPQEPSHYQS----DDEEDDDECDDEDECDDDDQQE 200

[Close]

BLAST of Cp4.1LG01g20190 vs. TAIR10
Match: AT5G22090.1 (AT5G22090.1 Protein of unknown function (DUF3049))

HSP 1 Score: 48.5 bits (114), Expect = 5.5e-06
Identity = 34/102 (33.33%), Postives = 55/102 (53.92%), Query Frame = 1


Query: 48  FPPPIPFLEALAGHRIRPPWILTRNCIDGRLILNLERVRHHQSLESHRENGRLILNLVP- 107
           FPPPI  L + +G  +    + TR   +GRL+L    +  H +  + R++GRL+L     
Sbjct: 225 FPPPIRSLSSQSGSSLH---MKTRRD-NGRLVLEAVSMPSHNNFSAKRQDGRLLLTFAEI 284

Query: 108 ANVAGVGTEDEDDQDLQFIEDAEEEEKIKESVECEEGDDPEY 149
           +N      EDE D ++Q+ ++ EEEE+ +E  E E  D+  Y
Sbjct: 285 SNEPNYDKEDEIDSEVQWFDEEEEEEEEEEDEEEEAPDEFAY 322

[Close]

BLAST of Cp4.1LG01g20190 vs. NCBI nr
Match: gi|778702534|ref|XP_011655221.1| (PREDICTED: uncharacterized protein LOC105435501 [Cucumis sativus])

HSP 1 Score: 161.8 bits (408), Expect = 1.3e-36
Identity = 97/171 (56.73%), Postives = 112/171 (65.50%), Query Frame = 1


Query: 38  QNQCPVIETEFPPPIPFLEA-LAGHRIRPPWILTRNCIDGRLILNLERVRHHQSLESHRE 97
           QNQ  V++ +FPPPIPF+    AG+R R PW+LTR   + RLIL LERV  HQSLES RE
Sbjct: 126 QNQRCVLKKQFPPPIPFIATQAAGNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRE 185

Query: 98  NGRLILNLVPANVAGVGTEDEDDQD--LQFIEDAEEEEKIKESVEC----EEGDDPEYGF 157
           NGRLILNLVP         DE DQD     IE+ E  E+I ES++C    +EG D E   
Sbjct: 186 NGRLILNLVPI--------DERDQDHFQHLIEEKEGNEEIVESIDCDGGEDEGTDSEISI 245

Query: 158 KSFPFG--GGGGGGRMVCDRGPFCGVNGNLGERHVVHGHFGSAPLRSMGTV 200
           +S+ +G  GGGGGG M      FCG NGN  ERHVVHGHFGSAPLR MGTV
Sbjct: 246 RSYTYGGEGGGGGGGMT-----FCGANGNFEERHVVHGHFGSAPLRPMGTV 283

[Close]

BLAST of Cp4.1LG01g20190 vs. NCBI nr
Match: gi|700195845|gb|KGN51022.1| (hypothetical protein Csa_5G409650 [Cucumis sativus])

HSP 1 Score: 161.8 bits (408), Expect = 1.3e-36
Identity = 97/171 (56.73%), Postives = 112/171 (65.50%), Query Frame = 1


Query: 38  QNQCPVIETEFPPPIPFLEA-LAGHRIRPPWILTRNCIDGRLILNLERVRHHQSLESHRE 97
           QNQ  V++ +FPPPIPF+    AG+R R PW+LTR   + RLIL LERV  HQSLES RE
Sbjct: 156 QNQRCVLKKQFPPPIPFIATQAAGNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRE 215

Query: 98  NGRLILNLVPANVAGVGTEDEDDQD--LQFIEDAEEEEKIKESVEC----EEGDDPEYGF 157
           NGRLILNLVP         DE DQD     IE+ E  E+I ES++C    +EG D E   
Sbjct: 216 NGRLILNLVPI--------DERDQDHFQHLIEEKEGNEEIVESIDCDGGEDEGTDSEISI 275

Query: 158 KSFPFG--GGGGGGRMVCDRGPFCGVNGNLGERHVVHGHFGSAPLRSMGTV 200
           +S+ +G  GGGGGG M      FCG NGN  ERHVVHGHFGSAPLR MGTV
Sbjct: 276 RSYTYGGEGGGGGGGMT-----FCGANGNFEERHVVHGHFGSAPLRPMGTV 313

[Close]

BLAST of Cp4.1LG01g20190 vs. NCBI nr
Match: gi|659121100|ref|XP_008460499.1| (PREDICTED: uncharacterized protein LOC103499299 [Cucumis melo])

HSP 1 Score: 161.0 bits (406), Expect = 2.1e-36
Identity = 99/188 (52.66%), Postives = 115/188 (61.17%), Query Frame = 1


Query: 27  CATSFRFPMQNQNQCPVIETEFPPPIPFLEA-LAGHRIRPPWILTRNCIDGRLILNLERV 86
           C  + R     QNQ  +++ ++PPPIPF+    AG+R R PWILTR   + RLIL LERV
Sbjct: 30  CYRTNRHNFALQNQRCMLKKQYPPPIPFIATQAAGNRPRSPWILTRYYSNRRLILKLERV 89

Query: 87  RHHQSLESHRENGRLILNLVPANVAGVGTEDEDDQDLQFIEDAEEEEKIKESVEC----E 146
             HQSLES RENGRLILNLVP        ED  D     IE+ E +E+I ES+EC    +
Sbjct: 90  TQHQSLESRRENGRLILNLVP-------IEDRQDHLQHLIEEKEGDEEIVESIECDGGED 149

Query: 147 EGDDPEYGFKSFPF----------GGGGGGGRMVCDRGPFCGVNGNLGERHVVHGHFGSA 200
           EG D E  FKS  +          GGGGGGG M+     FCGVNGN  ERHVVHGH GSA
Sbjct: 150 EGTDSEISFKSCTYGGEGGGGGGGGGGGGGGGMM-----FCGVNGNFEERHVVHGHLGSA 205

[Close]

BLAST of Cp4.1LG01g20190 vs. NCBI nr
Match: gi|802634652|ref|XP_012078114.1| (PREDICTED: protein FANTASTIC FOUR 1-like [Jatropha curcas])

HSP 1 Score: 84.7 bits (208), Expect = 2.0e-13
Identity = 52/114 (45.61%), Postives = 65/114 (57.02%), Query Frame = 1


Query: 35  MQNQNQCPVIETEFPPPIPFLEALAGHRIRPPWILTRNCI-DGRLILNLERVRHHQSLES 94
           ++NQ  C + + EFPPPIP L        R PW+L R    DGRLIL  ERV+HH+   +
Sbjct: 71  LRNQRYCNIKKKEFPPPIPSLARTGNLPSRMPWVLRRYYTNDGRLILKEERVKHHEYFRA 130

Query: 95  HRENGRLILNLVPANVAGVGTEDEDDQDLQFIEDAEEEEKIKESVECEEGDDPE 148
           HR NGRL L LVP        +DE    L + +D EEEE+ +E    EEGDD E
Sbjct: 131 HRSNGRLTLQLVP-------LDDEVYPPLDYSDDEEEEEEEEE----EEGDDDE 173

[Close]

BLAST of Cp4.1LG01g20190 vs. NCBI nr
Match: gi|1000977366|ref|XP_002513868.2| (PREDICTED: uncharacterized protein LOC8263019 [Ricinus communis])

HSP 1 Score: 79.7 bits (195), Expect = 6.3e-12
Identity = 47/113 (41.59%), Postives = 68/113 (60.18%), Query Frame = 1


Query: 36  QNQNQCPVIETEFPPPIPFLEALAGHRIRPPWILTRNCIDGRLILNLERVRHHQSLESHR 95
           ++Q QC      +PP IP L          PWILTR+  +GRLIL  ER+ HH+  ES+R
Sbjct: 440 RDQQQCEK-RKRYPPTIPLLARTGNLPSHTPWILTRHYFNGRLILREERLEHHEYFESYR 499

Query: 96  ENGRLILNLVPANVAGVGTEDEDDQ-DLQFIEDAEEEEKIKESVECEEGDDPE 148
           ENGRLIL L+      +  +DE+++ +LQ +E   +EEK +ES E EE ++ +
Sbjct: 500 ENGRLILKLIRIPFDDIAYDDEEEELELQELE-LIQEEKTQESTEEEEEEEED 550

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g20190 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g20190 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRM2_CUCSA	8.8e-37	56.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G409650 PE=4 SV=1	[more]
A0A067KLR6_JATCU	1.4e-13	45.61	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12001 PE=4 SV=1	[more]
B9RJE8_RICCO	4.4e-12	41.59	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1033420 PE=4 SV=1	[more]
M1CMR7_SOLTU	1.1e-10	36.49	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027533 PE=4 SV=1	[more]
M5XJE1_PRUPE	1.8e-10	35.42	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020391mg PE=4 SV=1	[more]

BLAST of Cp4.1LG01g20190 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22110.1	7.4e-11	39.42	structural constituent of ribosome	[more]
AT5G22090.1	5.5e-06	33.33	Protein of unknown function (DUF3049)	[more]

BLAST of Cp4.1LG01g20190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778702534\|ref\|XP_011655221.1\|	1.3e-36	56.73	PREDICTED: uncharacterized protein LOC105435501 [Cucumis sativus]	[more]
gi\|700195845\|gb\|KGN51022.1\|	1.3e-36	56.73	hypothetical protein Csa_5G409650 [Cucumis sativus]	[more]
gi\|659121100\|ref\|XP_008460499.1\|	2.1e-36	52.66	PREDICTED: uncharacterized protein LOC103499299 [Cucumis melo]	[more]
gi\|802634652\|ref\|XP_012078114.1\|	2.0e-13	45.61	PREDICTED: protein FANTASTIC FOUR 1-like [Jatropha curcas]	[more]
gi\|1000977366\|ref\|XP_002513868.2\|	6.3e-12	41.59	PREDICTED: uncharacterized protein LOC8263019 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021410	FAF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g20190.1	Cp4.1LG01g20190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 47..104 score: 1.1
None	No IPR available	PANTHER	PTHR33155	FAMILY NOT NAMED	coord: 47..145 score: 3.0
None	No IPR available	PANTHER	PTHR33155:SF11	SUBFAMILY NOT NAMED	coord: 47..145 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g20190	Cucsa.034620	Cucumber (Gy14) v1	cgycpeB0018
Cp4.1LG01g20190	CmaCh15G007300	Cucurbita maxima (Rimu)	cmacpeB318
Cp4.1LG01g20190	CmaCh04G023110	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g20190	CmoCh04G024140	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g20190	Cla019783	Watermelon (97103) v1	cpewmB399
Cp4.1LG01g20190	Csa5G409650	Cucumber (Chinese Long) v2	cpecuB441
Cp4.1LG01g20190	MELO3C022817	Melon (DHL92) v3.5.1	cpemeB360
Cp4.1LG01g20190	ClCG03G008900	Watermelon (Charleston Gray)	cpewcgB379
Cp4.1LG01g20190	CSPI05G14700	Wild cucumber (PI 183967)	cpecpiB441
Cp4.1LG01g20190	Lsi09G009510	Bottle gourd (USVL1VR-Ls)	cpelsiB311
Cp4.1LG01g20190	MELO3C022817.2	Melon (DHL92) v3.6.1	cpemedB420
Cp4.1LG01g20190	CsaV3_5G023830	Cucumber (Chinese Long) v3	cpecucB0545
Cp4.1LG01g20190	Bhi12G001094	Wax gourd	cpewgoB0490
Cp4.1LG01g20190	CsGy5G014620	Cucumber (Gy14) v2	cgybcpeB650
Cp4.1LG01g20190	Carg01478	Silver-seed gourd	carcpeB1158
Cp4.1LG01g20190	Carg18253	Silver-seed gourd	carcpeB0747

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g20190	Cp4.1LG13g05030	Cucurbita pepo (Zucchini)	cpecpeB199

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g20190	Cucurbita moschata (Rifu)	cmocpeB280