Cucsa.034620 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.034620
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Structural constituent of ribosome, putative
Location	scaffold00444 : 473104 .. 473977 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTATTTCTCTGGCGGCCAACCCAACTTGTTTACCAAACTTAAGATAATCGTTTCATCCTTCTTCAATTTCCTTCTCTGTTCCTCCACTTTTCGTTtCCCCATCCAAAAGCACAACCGAATTCCACCACTACTACTTTCATTCTCTATTTCTGGAGGACTCAAATCACTCATTTCTTCCAAACAACAGTTCACGGAAGATCCAGTGATTCGCAGTGTTGGACTCGCCATTATCAGGTCCAATCTGTTGACTCATTCCTCTTCATCTTCCTCTTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTGTTTTtCTTCCATCAGATCTTGTAATTTCTCAATGGACGATTTGATCGGCACTGAGAGCGGTGTTTGTTTAACTTCAAATTCTGAAGAAATGGAAACTCACTCCGATTTCGATTGTCCTTATTATCGCACTGATCGACACCATTTCATTTTGCAAAATCAACGATGTGTGTTGAAAAAACAATTTCCACCGCCGATTCCTTTTATCGCAACACAGGCCGCAGGGAATCGACCTCGGTCGCCATGGGTCTTAACGAGATATTATTCAAATAGAAGATTGATTTTGAAACTGGAGAGAGTCACGCAACATCAGTCCTTAGAATCGCGCCGAGAAAATGGCCGTTTGATTCTGAATCTCGTGCCGATCGACGAACGTGATCAGGATCATTTTCAGCACTTAATCGAAGAGAAGGAAGGAAATGAGGAGATCGTCGAATCGATTGATTGTGATGGAGGAGAAGATGAAGGTACAGGCTCTGAAATTTCTATCAGGAGTTATACGTACGGCGGAGAAGGTGGTGGCGGTGGCGGAGGAATGACGTTTTGTGGTGCGAATG

mRNA sequence

ATGGATTATTTCTCTGGCGGCCAACCCAACTTGTTTACCAAACTTAAGATAATCGTTTCATCCTTCTTCAATTTCCTTCTCTGTTCCTCCACTTTTCGTTTCCCCATCCAAAAGCACAACCGAATTCCACCACTACTACTTTCATTCTCTATTTCTGGAGGACTCAAATCACTCATTTCTTCCAAACAACAGTTCACGGAAGATCCAGTGATTCGCAGTGTTGGACTCGCCATTATCAGGTCCAATCTGTTGACTCAttcctcttcatcttcctcttctgcttcttcttcttcttcttcttcttcttcttcttctttttgtttttcttcCATCAGATCTTGTAATTTCTCAATGGACGATTTGATCGGCACTGAGAGCGGTGTTTGTTTAACTTCAAATTCTGAAGAAATGGAAACTCACTCCGATTTCGATTGTCCTTATTATCGCACTGATCGACACCATTTCATTTTGCAAAATCAACGATGTGTGTTGAAAAAACAATTTCCACCGCCGATTCCTTTTATCGCAACACAGGCCGCAGGGAATCGACCTCGGTCGCCATGGGTCTTAACGAGATATTATTCAAATAGAAGATTGATTTTGAAACTGGAGAGAGTCACGCAACATCAGTCCTTAGAATCGCGCCGAGAAAATGGCCGTTTGATTCTGAATCTCGTGCCGATCGACGAACGTGATCAGGATCATTTTCAGCACTTAATCGAAGAGAAGGAAGGAAATGAGGAGATCGTCGAATCGATTGATTGTGATGGAGGAGAAGATGAAGGTACAGGCTCTGAAATTTCTATCAGGAGTTATACGTACGGCGGAGAAGGTGGTGGCGGTGGCGGAGGAATGACGTTTTGTGGTGCGAATG

Coding sequence (CDS)

ATGGATTATTTCTCTGGCGGCCAACCCAACTTGTTTACCAAACTTAAGATAATCGTTTCATCCTTCTTCAATTTCCTTCTCTGTTCCTCCACTTTTCGTTtCCCCATCCAAAAGCACAACCGAATTCCACCACTACTACTTTCATTCTCTATTTCTGGAGGACTCAAATCACTCATTTCTTCCAAACAACAGTTCACGGAAGATCCAGTGATTCGCAGTGTTGGACTCGCCATTATCAGGTCCAATCTGTTGACTCATTCCTCTTCATCTTCCTCTTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTGTTTTtCTTCCATCAGATCTTGTAATTTCTCAATGGACGATTTGATCGGCACTGAGAGCGGTGTTTGTTTAACTTCAAATTCTGAAGAAATGGAAACTCACTCCGATTTCGATTGTCCTTATTATCGCACTGATCGACACCATTTCATTTTGCAAAATCAACGATGTGTGTTGAAAAAACAATTTCCACCGCCGATTCCTTTTATCGCAACACAGGCCGCAGGGAATCGACCTCGGTCGCCATGGGTCTTAACGAGATATTATTCAAATAGAAGATTGATTTTGAAACTGGAGAGAGTCACGCAACATCAGTCCTTAGAATCGCGCCGAGAAAATGGCCGTTTGATTCTGAATCTCGTGCCGATCGACGAACGTGATCAGGATCATTTTCAGCACTTAATCGAAGAGAAGGAAGGAAATGAGGAGATCGTCGAATCGATTGATTGTGATGGAGGAGAAGATGAAGGTACAGGCTCTGAAATTTCTATCAGGAGTTATACGTACGGCGGAGAAGGTGGTGGCGGTGGCGGAGGAATGACGTTTTGTGGTGCGAATG

Protein sequence

MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLISSKQQFTEDPVIRSVGLAIIRSNLLTHSSSSSSSASSSSSSSSSSSFCFSSIRSCNFSMDDLIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAAGNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLIEEKEGNEEIVESIDCDGGEDEGTGSEISIRSYTYGGEGGGGGGGMTFCGANX

Homology

[Close]

BLAST of Cucsa.034620 vs. TrEMBL
Match: A0A0A0KRM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G409650 PE=4 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 7.5e-162
Identity = 288/291 (98.97%), Postives = 288/291 (98.97%), Query Frame = 1


Query: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS 60
           MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS
Sbjct: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS 60

Query: 61  SKQQFTEDPVIRSVGLAIIRSNLLTHSSSSSSSASSSSSSSSSSSFCFSSIRSCNFSMDD 120
           SKQQFTEDPVIRSVGLAIIRSNLLTHSSSSSSSAS  SSSSSSSSFCFSSIRSCNFSMDD
Sbjct: 61  SKQQFTEDPVIRSVGLAIIRSNLLTHSSSSSSSAS--SSSSSSSSFCFSSIRSCNFSMDD 120

Query: 121 LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA 180
           LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA
Sbjct: 121 LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA 180

Query: 181 GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI 240
           GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI
Sbjct: 181 GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI 240

Query: 241 EEKEGNEEIVESIDCDGGEDEGTGSEISIRSYTYGGEGGGGGGGMTFCGAN 292
           EEKEGNEEIVESIDCDGGEDEGT SEISIRSYTYGGEGGGGGGGMTFCGAN
Sbjct: 241 EEKEGNEEIVESIDCDGGEDEGTDSEISIRSYTYGGEGGGGGGGMTFCGAN 289

[Close]

BLAST of Cucsa.034620 vs. TrEMBL
Match: A0A067KKE3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12002 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24
Identity = 92/256 (35.94%), Postives = 138/256 (53.91%), Query Frame = 1


Query: 10  NLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLISSKQQFTEDP 69
           +LF K K I SS F  +L S+    P Q            SIS GLK+L+ S+++ +   
Sbjct: 9   SLFYKAKSIASSLFGIVLWSAILSAPRQ-----------ISISSGLKTLVYSQRESSSQF 68

Query: 70  VIRSVGLAIIRSNLLTHSSSSSSSASSSSSSSSSSSFCFSSIRSCNFSMDDLIGTESGVC 129
           ++ S  ++          SSSS S S+S S S SSSFC     S +  +DDLIGT+SGV 
Sbjct: 69  IVHSYTIS-------PPPSSSSLSTSASLSMSLSSSFC----SSWSSMLDDLIGTDSGVH 128

Query: 130 LTSNSEEMETHSDFDCPYYRTDRHHFILQNQR-CVLKKQFPPPIPFIA--TQAAGNRPRS 189
           L  + EE E         Y    H+   +NQ  C +KK++PPPIP +A  +   G+ PR 
Sbjct: 129 LDPSEEEAEIPRMEKMEKYSNKCHNLGKRNQELCEMKKKYPPPIPLLARTSNLDGHMPR- 188

Query: 190 PWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLIEEKEGN 249
             +LTR+Y + RLIL+ E+V  H+  E+ RENG LIL LV +++  +       E+KE  
Sbjct: 189 --ILTRHYCDGRLILREEKVKHHEYFEAYRENGTLILKLVQLNDTVECCHSCNCEKKEEI 239

Query: 250 E-EIVESIDCDGGEDE 262
           E + ++ ++ DG +++
Sbjct: 249 EMQDLQLMEEDGSQED 239

[Close]

BLAST of Cucsa.034620 vs. TrEMBL
Match: B9H771_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16470g PE=4 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 6.8e-22
Identity = 76/200 (38.00%), Postives = 111/200 (55.50%), Query Frame = 1


Query: 78  IIRSNLLTHSSSSSSSASSSSSSSSSSSFCFSSIRSCNFSMDDLIGTESGVCLTSNSEEM 137
           I+ S ++   S  S S S     S +++   SS  SC+ ++DDLIGTESGV + +N EE 
Sbjct: 43  ILHSYMIPAPSPPSWSPSPPLVRSLTNNS--SSYSSCSSALDDLIGTESGVYMNANIEEE 102

Query: 138 ETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAAGNRP-RSPWVLTRYYSN 197
               +    Y     HH   + QR   +K++PPPIP +A    GN P   PW+LTR+Y +
Sbjct: 103 TAQMEKLESY-----HHQYKRKQRYATRKKYPPPIPLLAR--TGNLPGHMPWILTRHYID 162

Query: 198 RRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLIEEKEGNEEI--VESI- 257
            RL+L  ERV  H+  E++RENGRL+LN+VP+D  D+    H + + E  +E+  V+S+ 
Sbjct: 163 GRLVLVEERVKNHEYFEAQRENGRLVLNIVPLD--DKITCSHFVSKNEEQKELQDVDSLE 222

Query: 258 -------DCDGGEDEGTGSE 267
                  D D  E+E  G E
Sbjct: 223 KNSDQEFDDDDEEEEEEGRE 231

[Close]

BLAST of Cucsa.034620 vs. TrEMBL
Match: B9RJE8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1033420 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.2e-21
Identity = 87/229 (37.99%), Postives = 120/229 (52.40%), Query Frame = 1


Query: 49  FSISGGLKSLISSKQQFTEDPVIRSVGLAIIRSNLLTHSSSSSSSASSSSSSSSSSSFCF 108
           ++ S GLK+LI  +       +I S       S +L   S S++S+SS   S + SS   
Sbjct: 8   WAASPGLKTLIHPRDPTHHPLIIHSCKRPSPPSPMLLSPSLSTTSSSSLFQSVADSS--- 67

Query: 109 SSIRSCNFSMDDLIGTESGVCLTSNSEEMETHS-DFDCPYYRTDRHHFILQNQRCVLKKQ 168
               S +  +DDLIGTESGVCL S  EE  T     +  Y+    +H     Q+C  +K+
Sbjct: 68  -PYSSWSSMLDDLIGTESGVCLNSGIEERATIMWKHEAGYHP---NHGKRDQQQCEKRKR 127

Query: 169 FPPPIPFIATQAAGNRP-RSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNL- 228
           +PP IP +A    GN P  +PW+LTR+Y N RLIL+ ER+  H+  ES RENGRLIL L 
Sbjct: 128 YPPTIPLLAR--TGNLPSHTPWILTRHYFNGRLILREERLEHHEYFESYRENGRLILKLI 187

Query: 229 -VPIDERDQDHFQHLIEEKEGNEEIVESIDCDGGEDEGTGSEISIRSYT 274
            +P D+   D  +  +E +E  E I E    +  E+E    E  I  YT
Sbjct: 188 RIPFDDIAYDDEEEELELQE-LELIQEEKTQESTEEEEEEEEDEIDVYT 226

[Close]

BLAST of Cucsa.034620 vs. TrEMBL
Match: M5XJE1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020391mg PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.9e-19
Identity = 74/192 (38.54%), Postives = 105/192 (54.69%), Query Frame = 1


Query: 86  HSSSSSSSASSSSSSSSSSSFCF--SSIRSCNFSMDDLIGTESGVCLTSNSEEMETHSDF 145
           H  S + S+SSSS SSS +S C   SS+   + +MDDLIGT+SGV +    E+ +     
Sbjct: 43  HKVSPAPSSSSSSGSSSLTSSCMLDSSLSWSSSAMDDLIGTDSGVPIMLTKEQEKLGFLK 102

Query: 146 DCPYYRTDRHHFILQNQRCV------LKKQFPPPIPFIATQAAGNRPRSPWVLTRYY--S 205
           +   +   R +     +         +K+++PPPIP +A Q    + R PW+ T++Y  S
Sbjct: 103 NTVEFSMSRRNEAKSTRSTTTRRSEKIKREYPPPIPLLA-QTGNLQGRMPWIFTKHYDHS 162

Query: 206 NRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLIEEKEGNEEIVE---- 262
           N RL+LK ERV  H+  E+RRE+GRLILNLVP+D         L    E NEE +E    
Sbjct: 163 NGRLVLKGERVKHHEYFEARREDGRLILNLVPLDNALACFDSALTCCDEENEEELEMDED 222

[Close]

BLAST of Cucsa.034620 vs. TAIR10
Match: AT1G22110.1 (AT1G22110.1 structural constituent of ribosome)

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-16
Identity = 66/195 (33.85%), Postives = 98/195 (50.26%), Query Frame = 1


Query: 87  SSSSSSSASSSSSSSS-----SSSFCFSSI-----RSCNFSMDDLIGTESGVCLTSNSEE 146
           S SSSS ASSS  S S     +S F  SS+      S + ++ D IGTES   + S  E 
Sbjct: 8   SDSSSSMASSSDQSLSINSDQTSPFVTSSMLSRTSSSSSSAVGDYIGTESCFDILSADEG 67

Query: 147 METHSDFDCPY---YRTDRHHFILQNQRCVLKKQFPPPIPFIATQAAGNRPRSPWVLTRY 206
            +  S    P    +R        +  R    ++FPPPIP +A Q     P  PWVL R 
Sbjct: 68  NDVVSVASEPVKSRFRYGGRRREEREARAAAAREFPPPIPLLA-QTGNLLPHMPWVLKRV 127

Query: 207 Y-SNRRLILKLERVTQHQSLESRRENGRLILNLVPIDE------RDQDHFQHLIEEKEGN 262
             S+ RLIL+ E+V  H+   + R NGRL L+LVP+D+      ++  H+Q   +++E +
Sbjct: 128 VTSDGRLILREEKVRHHEYFRANRSNGRLTLHLVPLDDDVFDLPQEPSHYQS--DDEEDD 187

[Close]

BLAST of Cucsa.034620 vs. NCBI nr
Match: gi|700195845|gb|KGN51022.1| (hypothetical protein Csa_5G409650 [Cucumis sativus])

HSP 1 Score: 577.8 bits (1488), Expect = 1.1e-161
Identity = 288/291 (98.97%), Postives = 288/291 (98.97%), Query Frame = 1


Query: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS 60
           MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS
Sbjct: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS 60

Query: 61  SKQQFTEDPVIRSVGLAIIRSNLLTHSSSSSSSASSSSSSSSSSSFCFSSIRSCNFSMDD 120
           SKQQFTEDPVIRSVGLAIIRSNLLTHSSSSSSSAS  SSSSSSSSFCFSSIRSCNFSMDD
Sbjct: 61  SKQQFTEDPVIRSVGLAIIRSNLLTHSSSSSSSAS--SSSSSSSSFCFSSIRSCNFSMDD 120

Query: 121 LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA 180
           LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA
Sbjct: 121 LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA 180

Query: 181 GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI 240
           GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI
Sbjct: 181 GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI 240

Query: 241 EEKEGNEEIVESIDCDGGEDEGTGSEISIRSYTYGGEGGGGGGGMTFCGAN 292
           EEKEGNEEIVESIDCDGGEDEGT SEISIRSYTYGGEGGGGGGGMTFCGAN
Sbjct: 241 EEKEGNEEIVESIDCDGGEDEGTDSEISIRSYTYGGEGGGGGGGMTFCGAN 289

[Close]

BLAST of Cucsa.034620 vs. NCBI nr
Match: gi|778702534|ref|XP_011655221.1| (PREDICTED: uncharacterized protein LOC105435501 [Cucumis sativus])

HSP 1 Score: 513.5 bits (1321), Expect = 2.5e-142
Identity = 258/291 (88.66%), Postives = 258/291 (88.66%), Query Frame = 1


Query: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS 60
           MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS
Sbjct: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS 60

Query: 61  SKQQFTEDPVIRSVGLAIIRSNLLTHSSSSSSSASSSSSSSSSSSFCFSSIRSCNFSMDD 120
           SKQQFTEDPVIRSVGLAIIRS                                CNFSMDD
Sbjct: 61  SKQQFTEDPVIRSVGLAIIRS--------------------------------CNFSMDD 120

Query: 121 LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA 180
           LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA
Sbjct: 121 LIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQAA 180

Query: 181 GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI 240
           GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI
Sbjct: 181 GNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLI 240

Query: 241 EEKEGNEEIVESIDCDGGEDEGTGSEISIRSYTYGGEGGGGGGGMTFCGAN 292
           EEKEGNEEIVESIDCDGGEDEGT SEISIRSYTYGGEGGGGGGGMTFCGAN
Sbjct: 241 EEKEGNEEIVESIDCDGGEDEGTDSEISIRSYTYGGEGGGGGGGMTFCGAN 259

[Close]

BLAST of Cucsa.034620 vs. NCBI nr
Match: gi|659121100|ref|XP_008460499.1| (PREDICTED: uncharacterized protein LOC103499299 [Cucumis melo])

HSP 1 Score: 314.7 bits (805), Expect = 1.7e-82
Identity = 154/182 (84.62%), Postives = 164/182 (90.11%), Query Frame = 1


Query: 118 MDDLIGTESGVCLTSNSEEMETHSDFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIAT 177
           MDDLIGTESGVCLTSNSEEMETHSDFDC  YRT+RH+F LQNQRC+LKKQ+PPPIPFIAT
Sbjct: 1   MDDLIGTESGVCLTSNSEEMETHSDFDCRCYRTNRHNFALQNQRCMLKKQYPPPIPFIAT 60

Query: 178 QAAGNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQ 237
           QAAGNRPRSPW+LTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPI++R QDH Q
Sbjct: 61  QAAGNRPRSPWILTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIEDR-QDHLQ 120

Query: 238 HLIEEKEGNEEIVESIDCDGGEDEGTGSEISIRSYTYGGE--------GGGGGGGMTFCG 292
           HLIEEKEG+EEIVESI+CDGGEDEGT SEIS +S TYGGE        GGGGGGGM FCG
Sbjct: 121 HLIEEKEGDEEIVESIECDGGEDEGTDSEISFKSCTYGGEGGGGGGGGGGGGGGGMMFCG 180

[Close]

BLAST of Cucsa.034620 vs. NCBI nr
Match: gi|802638064|ref|XP_012078349.1| (PREDICTED: uncharacterized protein LOC105639022 [Jatropha curcas])

HSP 1 Score: 122.1 bits (305), Expect = 1.6e-24
Identity = 92/256 (35.94%), Postives = 138/256 (53.91%), Query Frame = 1


Query: 10  NLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLISSKQQFTEDP 69
           +LF K K I SS F  +L S+    P Q            SIS GLK+L+ S+++ +   
Sbjct: 9   SLFYKAKSIASSLFGIVLWSAILSAPRQ-----------ISISSGLKTLVYSQRESSSQF 68

Query: 70  VIRSVGLAIIRSNLLTHSSSSSSSASSSSSSSSSSSFCFSSIRSCNFSMDDLIGTESGVC 129
           ++ S  ++          SSSS S S+S S S SSSFC     S +  +DDLIGT+SGV 
Sbjct: 69  IVHSYTIS-------PPPSSSSLSTSASLSMSLSSSFC----SSWSSMLDDLIGTDSGVH 128

Query: 130 LTSNSEEMETHSDFDCPYYRTDRHHFILQNQR-CVLKKQFPPPIPFIA--TQAAGNRPRS 189
           L  + EE E         Y    H+   +NQ  C +KK++PPPIP +A  +   G+ PR 
Sbjct: 129 LDPSEEEAEIPRMEKMEKYSNKCHNLGKRNQELCEMKKKYPPPIPLLARTSNLDGHMPR- 188

Query: 190 PWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIDERDQDHFQHLIEEKEGN 249
             +LTR+Y + RLIL+ E+V  H+  E+ RENG LIL LV +++  +       E+KE  
Sbjct: 189 --ILTRHYCDGRLILREEKVKHHEYFEAYRENGTLILKLVQLNDTVECCHSCNCEKKEEI 239

Query: 250 E-EIVESIDCDGGEDE 262
           E + ++ ++ DG +++
Sbjct: 249 EMQDLQLMEEDGSQED 239

[Close]

BLAST of Cucsa.034620 vs. NCBI nr
Match: gi|1000977366|ref|XP_002513868.2| (PREDICTED: uncharacterized protein LOC8263019 [Ricinus communis])

HSP 1 Score: 120.6 bits (301), Expect = 4.7e-24
Identity = 100/277 (36.10%), Postives = 141/277 (50.90%), Query Frame = 1


Query: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRFPIQKHNRIPPLLLSFSISGGLKSLIS 60
           M Y S  + NLF + K ++SS    +L S+T    +Q   +       ++ S GLK+LI 
Sbjct: 298 MGYIS--EKNLFYRGKSLLSSLCRIILWSTTLPSSMQVSKQC------WAASPGLKTLIH 357

Query: 61  SKQQFTEDPVIRSVGLAIIRSNLLTHSSSSSSSASSSSSSSSSSSFCFSSIRSCNFSMDD 120
            +       +I S       S +L   S S++S+SS   S + SS       S +  +DD
Sbjct: 358 PRDPTHHPLIIHSCKRPSPPSPMLLSPSLSTTSSSSLFQSVADSS----PYSSWSSMLDD 417

Query: 121 LIGTESGVCLTSNSEEMETHS-DFDCPYYRTDRHHFILQNQRCVLKKQFPPPIPFIATQA 180
           LIGTESGVCL S  EE  T     +  Y+    +H     Q+C  +K++PP IP +A   
Sbjct: 418 LIGTESGVCLNSGIEERATIMWKHEAGYHP---NHGKRDQQQCEKRKRYPPTIPLLAR-- 477

Query: 181 AGNRP-RSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNL--VPIDERDQDHF 240
            GN P  +PW+LTR+Y N RLIL+ ER+  H+  ES RENGRLIL L  +P D+   D  
Sbjct: 478 TGNLPSHTPWILTRHYFNGRLILREERLEHHEYFESYRENGRLILKLIRIPFDDIAYDDE 537

Query: 241 QHLIEEKEGNEEIVESIDCDGGEDEGTGSEISIRSYT 274
           +  +E +E  E I E    +  E+E    E  I  YT
Sbjct: 538 EEELELQE-LELIQEEKTQESTEEEEEEEEDEIDVYT 556

The following BLAST results are available for this feature:

BLAST of Cucsa.034620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRM2_CUCSA	7.5e-162	98.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G409650 PE=4 SV=1	[more]
A0A067KKE3_JATCU	1.1e-24	35.94	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12002 PE=4 SV=1	[more]
B9H771_POPTR	6.8e-22	38.00	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16470g PE=4 SV=2	[more]
B9RJE8_RICCO	1.2e-21	37.99	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1033420 PE=4 SV=1	[more]
M5XJE1_PRUPE	1.9e-19	38.54	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020391mg PE=4 SV=1	[more]

BLAST of Cucsa.034620 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22110.1	2.3e-16	33.85	structural constituent of ribosome	[more]

BLAST of Cucsa.034620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700195845\|gb\|KGN51022.1\|	1.1e-161	98.97	hypothetical protein Csa_5G409650 [Cucumis sativus]	[more]
gi\|778702534\|ref\|XP_011655221.1\|	2.5e-142	88.66	PREDICTED: uncharacterized protein LOC105435501 [Cucumis sativus]	[more]
gi\|659121100\|ref\|XP_008460499.1\|	1.7e-82	84.62	PREDICTED: uncharacterized protein LOC103499299 [Cucumis melo]	[more]
gi\|802638064\|ref\|XP_012078349.1\|	1.6e-24	35.94	PREDICTED: uncharacterized protein LOC105639022 [Jatropha curcas]	[more]
gi\|1000977366\|ref\|XP_002513868.2\|	4.7e-24	36.10	PREDICTED: uncharacterized protein LOC8263019 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021410	FAF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.034620.1	Cucsa.034620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 167..225 score: 9.2
None	No IPR available	PANTHER	PTHR33155	FAMILY NOT NAMED	coord: 117..274 score: 5.7
None	No IPR available	PANTHER	PTHR33155:SF11	SUBFAMILY NOT NAMED	coord: 117..274 score: 5.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.034620	Cla019783	Watermelon (97103) v1	cgywmB010
Cucsa.034620	Csa5G409650	Cucumber (Chinese Long) v2	cgycuB007
Cucsa.034620	MELO3C022817	Melon (DHL92) v3.5.1	cgymeB007
Cucsa.034620	ClCG03G008900	Watermelon (Charleston Gray)	cgywcgB009
Cucsa.034620	CSPI05G14700	Wild cucumber (PI 183967)	cgycpiB007
Cucsa.034620	CmaCh15G007300	Cucurbita maxima (Rimu)	cgycmaB0019
Cucsa.034620	CmaCh04G023110	Cucurbita maxima (Rimu)	cgycmaB0020
Cucsa.034620	CmoCh04G024140	Cucurbita moschata (Rifu)	cgycmoB0019
Cucsa.034620	Lsi09G009510	Bottle gourd (USVL1VR-Ls)	cgylsiB008
Cucsa.034620	Cp4.1LG13g05030	Cucurbita pepo (Zucchini)	cgycpeB0017
Cucsa.034620	Cp4.1LG01g20190	Cucurbita pepo (Zucchini)	cgycpeB0018
Cucsa.034620	MELO3C022817.2	Melon (DHL92) v3.6.1	cgymedB009
Cucsa.034620	CsaV3_5G023830	Cucumber (Chinese Long) v3	cgycucB010
Cucsa.034620	Cla97C03G060090	Watermelon (97103) v2	cgywmbB009
Cucsa.034620	Bhi12G001094	Wax gourd	cgywgoB009
Cucsa.034620	Carg18253	Silver-seed gourd	carcgyB0604
Cucsa.034620	Carg01478	Silver-seed gourd	carcgyB0941

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.034620	Cucurbita moschata (Rifu)	cgycmoB0018