Carg01478 (gene) Silver-seed gourd

Overview
NameCarg01478
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionProtein FANTASTIC FOUR like
LocationCucurbita_argyrosperma_scaffold_004 : 1187890 .. 1189365 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTATTTCTCCACCAAACGCTACTTGTTTTGCAGGCTTAAGATAATCGTTTCATCGTTCTTCGGCTTCCTTCTCCACGCATCCAGTTTTAGGTTTCCCATGCAAATGCCAATTCAAAAGCAAGGTCCAGTTGTCGAAGCAGTACGGTTTTCTATTTCTGGACTCAAAGCGCTAATTTCTTCTCAAGAAGAACATCAGGAAGTTGGACAAGAAGAGGAAGATCGCGTCATTCGCAGTTTTGGAATCGGCATTATTAGCTCAAAGCTGTTGACTCCTTCTTCTTCTTCTTCGATTGGATCTTGTAATTTGTTAATGGACGATTTGATTGGGACTGAGAGCGGTGTTTCCTTGACTGAGAATACAGAGGAAACCGAAGAGAAATTAACTCACGCCTATTTCGATCGTCCTCATAATTGCACCAATCTCCACGGTTTTACCGAGCAAAATCAGCGATGTGTGCCGAAAAAGCAGTTTCCACCGCCAATTCCTTCTCTGGCTACACAGGCAGGGCAACGAACCCGGTCGCCATGGATTTTAACAAGATATTACTCCGATAGAAGGTTGATTTTGAAACTCGAAAGAGTCAGGAATCATCAGTCCATGGAATCGCACCGCGAAAATGGCCGTCTCATTCTCAATCTCGTACCGTCACCAGTACCGGGCGTCGATAATCAGGATCTCCAGTTCATCGAAGAGGACGAAGGAAATGAGGAGATCGACTCGATTGAAAGCGAAGAAGGAGAAGATTATTCAGTTCCTGAAATTTCTTCCGAGAGTTTTACATACGGCGGCGAGGGCGTCGACGGCGGAGTGTTTTGTGATCGGAAACTGTTTTGTGGTGTAAATGGGAATTTAGAAGAACGACATGTCGTCCACAGACATTTCGATTCGACTCCTCTTCGTCCGATAGGTACAGTTATGTGATTTAGTAAAAGATGTGGAAAAAATGCTGTCAAATTCTTGTTAAACTCAATATTATTCTCTGATTACCATAATTATTCACCAACCAAAATAAATGGACGCAATTGACAAAATATAAAAATTAAAAATGTAATTTAACCTAATCTTGTAATACACCATTTTACATTATTATCATTAATCACTTTCTAAATAGAAATTAAAATAACAAAAAGTCCACTTTATCTTTGGGCCTAATGGGCCTGCCAAAAATAACATTGCAGTGGTATCCCTGAGCCCAATAAGCCCGTTTGTGACTCCCCATCCATGGGCTAGGCCCACTAAGAAGATGGGAGAAAAGTGACATGGTTTCATTGCTTTCTCTTGGAAGGTATTTCATTTACTGTACAGAAAAAAAATTACATTTAAATAGAAGAGAATATCTATGCTTGATAATACTCTCTACCCACTGGTGAATGAATAGTTGCAGAAGCTTTCTTCTTATTTACACAAAACTGTTGCATTTTCACTTGTGCAGATGACTCTATGCTCGTAGCGGTTCGGTCCCTGGAGACG

mRNA sequence

ATGGATTATTTCTCCACCAAACGCTACTTGTTTTGCAGGCTTAAGATAATCGTTTCATCGTTCTTCGGCTTCCTTCTCCACGCATCCAGTTTTAGGTTTCCCATGCAAATGCCAATTCAAAAGCAAGGTCCAGTTGTCGAAGCAGTACGGTTTTCTATTTCTGGACTCAAAGCGCTAATTTCTTCTCAAGAAGAACATCAGGAAGTTGGACAAGAAGAGGAAGATCGCGTCATTCGCAGTTTTGGAATCGGCATTATTAGCTCAAAGCTGTTGACTCCTTCTTCTTCTTCTTCGATTGGATCTTGTAATTTGTTAATGGACGATTTGATTGGGACTGAGAGCGGTGTTTCCTTGACTGAGAATACAGAGGAAACCGAAGAGAAATTAACTCACGCCTATTTCGATCGTCCTCATAATTGCACCAATCTCCACGGTTTTACCGAGCAAAATCAGCGATGTGTGCCGAAAAAGCAGTTTCCACCGCCAATTCCTTCTCTGGCTACACAGGCAGGGCAACGAACCCGGTCGCCATGGATTTTAACAAGATATTACTCCGATAGAAGGTTGATTTTGAAACTCGAAAGAGTCAGGAATCATCAGTCCATGGAATCGCACCGCGAAAATGGCCGTCTCATTCTCAATCTCGTACCGTCACCAGTACCGGGCGTCGATAATCAGGATCTCCAGTTCATCGAAGAGGACGAAGGAAATGAGGAGATCGACTCGATTGAAAGCGAAGAAGGAGAAGATTATTCAGTTCCTGAAATTTCTTCCGAGAGTTTTACATACGGCGGCGAGGGCGTCGACGGCGGAGTGTTTTGTGATCGGAAACTGTTTTGTGGTGTAAATGGGAATTTAGAAGAACGACATGTCGTCCACAGACATTTCGATTCGACTCCTCTTCGTCCGATAGATGACTCTATGCTCGTAGCGGTTCGGTCCCTGGAGACG

Coding sequence (CDS)

ATGGATTATTTCTCCACCAAACGCTACTTGTTTTGCAGGCTTAAGATAATCGTTTCATCGTTCTTCGGCTTCCTTCTCCACGCATCCAGTTTTAGGTTTCCCATGCAAATGCCAATTCAAAAGCAAGGTCCAGTTGTCGAAGCAGTACGGTTTTCTATTTCTGGACTCAAAGCGCTAATTTCTTCTCAAGAAGAACATCAGGAAGTTGGACAAGAAGAGGAAGATCGCGTCATTCGCAGTTTTGGAATCGGCATTATTAGCTCAAAGCTGTTGACTCCTTCTTCTTCTTCTTCGATTGGATCTTGTAATTTGTTAATGGACGATTTGATTGGGACTGAGAGCGGTGTTTCCTTGACTGAGAATACAGAGGAAACCGAAGAGAAATTAACTCACGCCTATTTCGATCGTCCTCATAATTGCACCAATCTCCACGGTTTTACCGAGCAAAATCAGCGATGTGTGCCGAAAAAGCAGTTTCCACCGCCAATTCCTTCTCTGGCTACACAGGCAGGGCAACGAACCCGGTCGCCATGGATTTTAACAAGATATTACTCCGATAGAAGGTTGATTTTGAAACTCGAAAGAGTCAGGAATCATCAGTCCATGGAATCGCACCGCGAAAATGGCCGTCTCATTCTCAATCTCGTACCGTCACCAGTACCGGGCGTCGATAATCAGGATCTCCAGTTCATCGAAGAGGACGAAGGAAATGAGGAGATCGACTCGATTGAAAGCGAAGAAGGAGAAGATTATTCAGTTCCTGAAATTTCTTCCGAGAGTTTTACATACGGCGGCGAGGGCGTCGACGGCGGAGTGTTTTGTGATCGGAAACTGTTTTGTGGTGTAAATGGGAATTTAGAAGAACGACATGTCGTCCACAGACATTTCGATTCGACTCCTCTTCGTCCGATAGATGACTCTATGCTCGTAGCGGTTCGGTCCCTGGAGACG

Protein sequence

MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALISSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTPSSSSSIGSCNLLMDDLIGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEEIDSIESEEGEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDSTPLRPIDDSMLVAVRSLET
Homology
[Close]
BLAST of Carg01478 vs. NCBI nr
Match: XP_022939162.1 (uncharacterized protein LOC111445156 [Cucurbita moschata])

HSP 1 Score: 577.8 bits (1488), Expect = 2.3e-161
Identity = 299/305 (98.03%), Postives = 302/305 (99.02%), Query Frame = 0 

Query: 1   MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
           MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI
Sbjct: 1   MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60

Query: 61  SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLTP-SSSSSIGSCNLLMDDLIGTESGVSLT 120
           SSQEEHQEVGQE+EDRVIRSFGIGII+SKLLTP SSSSSIGSCNLLMDDLIGTESGVSLT
Sbjct: 61  SSQEEHQEVGQEKEDRVIRSFGIGIITSKLLTPSSSSSSIGSCNLLMDDLIGTESGVSLT 120

Query: 121 ENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWI 180
           ENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWI
Sbjct: 121 ENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWI 180

Query: 181 LTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEX 240
           LTRYYSDRRLILKLERV NHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNE 
Sbjct: 181 LTRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVPSPVPGVDNQDLQFIEEDEGNEE 240

Query: 241 XXXXXXXXXEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDST 300
           XXXXXXXXXEDY+VPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDST
Sbjct: 241 XXXXXXXXXEDYTVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEERHVVHRHFDST 300

Query: 301 PLRPI 305
           PLRPI
Sbjct: 301 PLRPI 305

[Close]
BLAST of Carg01478 vs. NCBI nr
Match: XP_023551345.1 (uncharacterized protein LOC111809192 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.9 bits (1374), Expect = 3.8e-148
Identity = 273/319 (85.58%), Postives = 279/319 (87.46%), Query Frame = 0 

Query: 1   MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
           MDYFS+KRYLF ++KIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI
Sbjct: 1   MDYFSSKRYLFGKVKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60

Query: 61  SSQEEHQEVGQEEEDRVIRSFGIGIISSK-----------LLTPSSSSSIGSCNLLMDDL 120
           SS+EEHQEVGQE+EDRVIRSFGIGIISSK                     GSCNLLMDDL
Sbjct: 61  SSEEEHQEVGQEKEDRVIRSFGIGIISSKXXXXXXXXXXXXXXXXXXXXXGSCNLLMDDL 120

Query: 121 IGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQ 180
           IGTESGVSLTENTEETEEKLTHAYFDRP NC NLHGFTEQNQRCVPKKQFPPPIPSLATQ
Sbjct: 121 IGTESGVSLTENTEETEEKLTHAYFDRPRNCNNLHGFTEQNQRCVPKKQFPPPIPSLATQ 180

Query: 181 AGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDNQDLQ 240
           AGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGV NQDLQ
Sbjct: 181 AGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVHNQDLQ 240

Query: 241 FIEEDEGNEXXXXXXXXXXEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEER 300
           FIEEDEGNE          ED +VPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEER
Sbjct: 241 FIEEDEGNEEIDSIETEGEEDCTVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGNLEER 300

Query: 301 HVVHRHFDSTPLRPIDDSM 309
           HVVH HFDSTPLRPI   M
Sbjct: 301 HVVHGHFDSTPLRPIGTVM 319

[Close]
BLAST of Carg01478 vs. NCBI nr
Match: XP_022992860.1 (uncharacterized protein LOC111489065 [Cucurbita maxima])

HSP 1 Score: 362.1 bits (928), Expect = 2.0e-96
Identity = 176/203 (86.70%), Postives = 180/203 (88.67%), Query Frame = 0 

Query: 106 MDDLIGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPS 165
           MDDLIGTE+ VSLT NTEETEEKLTHAYFDRPHNC N HGFTE NQRCVPKKQFPPPIPS
Sbjct: 1   MDDLIGTETAVSLTSNTEETEEKLTHAYFDRPHNCNNFHGFTELNQRCVPKKQFPPPIPS 60

Query: 166 LATQAGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVDN 225
           LATQAGQ+TRSPWILTRYYSDRRLILKLERV NHQSMESHRENGRLILNLVPSPVPGV N
Sbjct: 61  LATQAGQQTRSPWILTRYYSDRRLILKLERVGNHQSMESHRENGRLILNLVPSPVPGVHN 120

Query: 226 QDLQFIEEDEGNEXXXXXXXXXXEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGN 285
           QDLQFIEEDEGNE          ED +VPEISSESFTYGG+GVD GVFCDRKLFCGVNGN
Sbjct: 121 QDLQFIEEDEGNEEIDSIESEGGEDCTVPEISSESFTYGGDGVDSGVFCDRKLFCGVNGN 180

Query: 286 LEERHVVHRHFDSTPLRPIDDSM 309
           LEERHVVH HFDSTPLRPI   M
Sbjct: 181 LEERHVVHGHFDSTPLRPIGTVM 203

[Close]
BLAST of Carg01478 vs. NCBI nr
Match: XP_022141482.1 (uncharacterized protein LOC111011861 [Momordica charantia])

HSP 1 Score: 286.2 bits (731), Expect = 1.4e-73
Identity = 189/319 (59.25%), Postives = 225/319 (70.53%), Query Frame = 0 

Query: 1   MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
           MDYFS +R LF +L+IIVSSFFGFLL AS+F  PMQ    K+ PV E+VRFSISGLKALI
Sbjct: 1   MDYFSGERDLFGKLRIIVSSFFGFLLCASTFWSPMQ--THKRRPVPESVRFSISGLKALI 60

Query: 61  SSQEEHQEVGQEEEDRVIRSFGIGIISSKLLT-PSSSSSIGSCNLLMDDLIGTESGVSLT 120
           SS+E   E G+E+  R+IRS G+GII SKLLT  SSSSSI SC LLMDDLIGTESGV LT
Sbjct: 61  SSEE--GEEGEEKAQRLIRSAGVGIIRSKLLTHSSSSSSIRSC-LLMDDLIGTESGVCLT 120

Query: 121 EN-TEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPW 180
            +  EE +EK +    D  ++  +     +QNQRC  +KQFPPPI  LA QAG RTR PW
Sbjct: 121 NSIAEEIDEKSS----DYRYHRVDHRDLDKQNQRCAAEKQFPPPISFLAAQAGPRTRPPW 180

Query: 181 ILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPG---VDNQDLQFIEEDE 240
           +LTR+ SD RL L LERVR+ Q MESHRENGRLIL  VP+P+P     D++DLQF+EED 
Sbjct: 181 VLTRHCSDGRLTLTLERVRHLQYMESHRENGRLILKFVPAPLPDDSEDDDRDLQFVEEDG 240

Query: 241 GNE----------XXXXXXXXXXEDYSVPEISSESFTYGGEGVDGGVFCDRKLFCGVNGN 300
           G E          XXXXXXXX  E+ S P  + +SFTYGGEG+ GG+F DR+ FC V   
Sbjct: 241 GREKRTEDXXXXXXXXXXXXXAIEEASDP--AFKSFTYGGEGIGGGMFRDRQPFCSV--- 300

Query: 301 LEERHVVHRHFDSTPLRPI 305
             +RHVV+ HF S PLRP+
Sbjct: 301 --DRHVVNGHFGSAPLRPM 303

[Close]
BLAST of Carg01478 vs. NCBI nr
Match: KGN51022.1 (hypothetical protein Csa_5G409650 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 3.1e-65
Identity = 176/335 (52.54%), Postives = 201/335 (60.00%), Query Frame = 0 

Query: 1   MDYFS-TKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVE-AVRFSIS-GLK 60
           MDYFS  +  LF +LKIIVSSFF FLL +S+FRF    PIQK   +    + FSIS GLK
Sbjct: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRF----PIQKHNRIPPLLLSFSISGGLK 60

Query: 61  ALISSQEEHQEVGQEEEDRVIRSFGIGIISSKLLT-----------------PSSSSSIG 120
           +LISS++      Q  ED VIRS G+ II S LLT                     SSI 
Sbjct: 61  SLISSKQ------QFTEDPVIRSVGLAIIRSNLLTHXXXXXXXXXXXXXXXXXXXFSSIR 120

Query: 121 SCNLLMDDLIGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFP 180
           SCN  MDDLIGTESGV LT N+EE E   TH+ FD P+  T+ H F  QNQRCV KKQFP
Sbjct: 121 SCNFSMDDLIGTESGVCLTSNSEEME---THSDFDCPYYRTDRHHFILQNQRCVLKKQFP 180

Query: 181 PPIPSLATQ-AGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSP 240
           PPIP +ATQ AG R RSPW+LTRYYS+RRLILKLERV  HQS+ES RENGRLILNLVP  
Sbjct: 181 PPIPFIATQAAGNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVP-- 240

Query: 241 VPGVDNQD----LQFIEEDEGNE--XXXXXXXXXXEDYSVPEISSESFTYGGEGVDGGVF 300
              +D +D       IEE EGNE            ++ +  EIS  S+T           
Sbjct: 241 ---IDERDQDHFQHLIEEKEGNEEIVESIDCDGGEDEGTDSEISIRSYT---XXXXXXXX 300

Query: 301 CDRKLFCGVNGNLEERHVVHRHFDSTPLRPIDDSM 309
                FCG NGN EERHVVH HF S PLRP+   M
Sbjct: 301 XXXXTFCGANGNFEERHVVHGHFGSAPLRPMGTVM 314

[Close]
BLAST of Carg01478 vs. TAIR10
Match: AT1G22110.1 (structural constituent of ribosome)

HSP 1 Score: 62.0 bits (149), Expect = 7.6e-10
Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 0 

Query: 157 KQFPPPIPSLATQAGQRTRSPWILTRYY-SDRRLILKLERVRNHQSMESHRENGRLILNL 216
           ++FPPPIP LA         PW+L R   SD RLIL+ E+VR+H+   ++R NGRL L+L
Sbjct: 100 REFPPPIPLLAQTGNLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTLHL 159

Query: 217 VP 218
           VP
Sbjct: 160 VP 161

[Close]
BLAST of Carg01478 vs. TrEMBL
Match: tr|A0A0A0KRM2|A0A0A0KRM2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G409650 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.0e-65
Identity = 176/335 (52.54%), Postives = 201/335 (60.00%), Query Frame = 0 

Query: 1   MDYFS-TKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVE-AVRFSIS-GLK 60
           MDYFS  +  LF +LKIIVSSFF FLL +S+FRF    PIQK   +    + FSIS GLK
Sbjct: 1   MDYFSGGQPNLFTKLKIIVSSFFNFLLCSSTFRF----PIQKHNRIPPLLLSFSISGGLK 60

Query: 61  ALISSQEEHQEVGQEEEDRVIRSFGIGIISSKLLT-----------------PSSSSSIG 120
           +LISS++      Q  ED VIRS G+ II S LLT                     SSI 
Sbjct: 61  SLISSKQ------QFTEDPVIRSVGLAIIRSNLLTHXXXXXXXXXXXXXXXXXXXFSSIR 120

Query: 121 SCNLLMDDLIGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFP 180
           SCN  MDDLIGTESGV LT N+EE E   TH+ FD P+  T+ H F  QNQRCV KKQFP
Sbjct: 121 SCNFSMDDLIGTESGVCLTSNSEEME---THSDFDCPYYRTDRHHFILQNQRCVLKKQFP 180

Query: 181 PPIPSLATQ-AGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSP 240
           PPIP +ATQ AG R RSPW+LTRYYS+RRLILKLERV  HQS+ES RENGRLILNLVP  
Sbjct: 181 PPIPFIATQAAGNRPRSPWVLTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVP-- 240

Query: 241 VPGVDNQD----LQFIEEDEGNE--XXXXXXXXXXEDYSVPEISSESFTYGGEGVDGGVF 300
              +D +D       IEE EGNE            ++ +  EIS  S+T           
Sbjct: 241 ---IDERDQDHFQHLIEEKEGNEEIVESIDCDGGEDEGTDSEISIRSYT---XXXXXXXX 300

Query: 301 CDRKLFCGVNGNLEERHVVHRHFDSTPLRPIDDSM 309
                FCG NGN EERHVVH HF S PLRP+   M
Sbjct: 301 XXXXTFCGANGNFEERHVVHGHFGSAPLRPMGTVM 314

[Close]
BLAST of Carg01478 vs. TrEMBL
Match: tr|A0A1S4E2W2|A0A1S4E2W2_CUCME (uncharacterized protein LOC103499299 OS=Cucumis melo OX=3656 GN=LOC103499299 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 8.0e-46
Identity = 119/213 (55.87%), Postives = 132/213 (61.97%), Query Frame = 0 

Query: 106 MDDLIGTESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPS 165
           MDDLIGTESGV LT N+EE E   TH+ FD     TN H F  QNQRC+ KKQ+PPPIP 
Sbjct: 1   MDDLIGTESGVCLTSNSEEME---THSDFDCRCYRTNRHNFALQNQRCMLKKQYPPPIPF 60

Query: 166 LATQ-AGQRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVPSPVPGVD 225
           +ATQ AG R RSPWILTRYYS+RRLILKLERV  HQS+ES RENGRLILNLVP      D
Sbjct: 61  IATQAAGNRPRSPWILTRYYSNRRLILKLERVTQHQSLESRRENGRLILNLVPIE----D 120

Query: 226 NQD--LQFIEEDEGNE--XXXXXXXXXXEDYSVPEISSESFTYG-----GEGVDGGVFCD 285
            QD     IEE EG+E            ++ +  EIS +S TYG                
Sbjct: 121 RQDHLQHLIEEKEGDEEIVESIECDGGEDEGTDSEISFKSCTYGXXXXXXXXXXXXXXXX 180

Query: 286 RKLFCGVNGNLEERHVVHRHFDSTPLRPIDDSM 309
              FCGVNGN EERHVVH H  S PLRP+   M
Sbjct: 181 XXXFCGVNGNFEERHVVHGHLGSAPLRPMGTVM 206

[Close]
BLAST of Carg01478 vs. TrEMBL
Match: tr|A0A2P4JKF5|A0A2P4JKF5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_57802 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.2e-20
Identity = 106/343 (30.90%), Postives = 156/343 (45.48%), Query Frame = 0 

Query: 1   MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
           MD+F     L C+ K IVSS    +L  S     +Q P  K+ P        + GLK L+
Sbjct: 4   MDFFGES--LLCKAKSIVSSLSEVMLWVSKLPSSIQTP--KEFPTHHDQYLQL-GLKTLV 63

Query: 61  SSQEEHQEVGQEEEDRVIRSFGIGII----SSKLLTPSSSSSIGSCNLLMDDLIGTESGV 120
             Q    +  ++    ++ S     I    SS LL+PS+ SS GS   ++DDLIG ESGV
Sbjct: 64  YPQAMSLQ-SRDHLANIVHSKTTPAISPSSSSMLLSPSTCSSSGSS--IIDDLIGAESGV 123

Query: 121 SLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRS 180
                TE   + L        H   N     + N+RC   K FPPP+P L          
Sbjct: 124 VYLSATEYDIKVL------EEHEPYNSEHVNKLNRRCAMTKNFPPPVPPL---------- 183

Query: 181 PWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLV--PSPVPGVDNQDLQF---- 240
           PW+ TR+Y+D +LIL++ERV++++  E+ RENGRL+LNLV     +   +N++L+     
Sbjct: 184 PWVFTRHYTDGKLILEVERVKHYEYFEARRENGRLVLNLVQLDDNINYEENEELELEDFQ 243

Query: 241 ----------IEEDEGNEXXXXXXXXXXEDYSVPEISSESFTY-------GGEGVDGGVF 300
                     IEED   E           D+ V E   E+F         G     G V 
Sbjct: 244 LVEDQEVVEKIEEDGAEEHQETEADYDGYDHKVNENLEENFATLLASSMPGNCLTVGMVL 303

Query: 301 CDRKLFCGVNGNLEERHVVHRHFDSTPLRPIDDSMLVAVRSLE 317
            +   +C  N + E  H    H  S PL P+  ++++A+R+ +
Sbjct: 304 NNSSSYCNANKH-EHVHAYLTHPGSAPLCPV-TTVVLALRAYQ 320

[Close]
BLAST of Carg01478 vs. TrEMBL
Match: tr|A0A2K2AHV4|A0A2K2AHV4_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G169900v3 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 9.8e-20
Identity = 72/198 (36.36%), Postives = 99/198 (50.00%), Query Frame = 0 

Query: 29  SSFRFPMQMPIQKQGPVVEAVRFSISGLKALISSQEEHQEVGQEEEDRVIRSFGIGIISS 88
           S  RFP + P             + SGLK L+    E  +        ++ S+ I   S 
Sbjct: 9   SPMRFPREWP-------------AYSGLKTLLHYSREPDQ-NLTHTCYILHSYMIPAPSP 68

Query: 89  KLLTPS---------SSSSIGSCNLLMDDLIGTESGVSLTENTEETEEKLTHAYFDRPHN 148
              +PS         +SSS  SC+  +DDLIGTESGV +  N EE   ++          
Sbjct: 69  PSWSPSPPLVRSLTNNSSSYSSCSSALDDLIGTESGVYMNANIEEETAQM--------EK 128

Query: 149 CTNLHGFTEQNQRCVPKKQFPPPIPSLATQAGQRTRSPWILTRYYSDRRLILKLERVRNH 208
             + H   ++ QR   +K++PPPIP LA         PWILTR+Y D RL+L  ERV+NH
Sbjct: 129 LESYHHQYKRKQRYATRKKYPPPIPLLARTGNLPGHMPWILTRHYIDGRLVLVEERVKNH 184

Query: 209 QSMESHRENGRLILNLVP 218
           +  E+ RENGRL+LN+VP
Sbjct: 189 EYFEAQRENGRLVLNIVP 184

[Close]
BLAST of Carg01478 vs. TrEMBL
Match: tr|A0A067KKE3|A0A067KKE3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_12002 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.1e-18
Identity = 84/260 (32.31%), Postives = 115/260 (44.23%), Query Frame = 0 

Query: 1   MDYFSTKRYLFCRLKIIVSSFFGFLLHASSFRFPMQMPIQKQGPVVEAVRFSISGLKALI 60
           MD +  K  LF + K I SS FG +L ++    P Q+ I              SGLK L+
Sbjct: 1   MDIYKEKVSLFYKAKSIASSLFGIVLWSAILSAPRQISIS-------------SGLKTLV 60

Query: 61  SSQEEHQEVGQEEEDRVIRSFGIG--------IISSKLLTPSSSSSIGSCNLLMDDLIGT 120
            SQ E           ++ S+ I                             ++DDLIGT
Sbjct: 61  YSQRE------SSSQFIVHSYTISPPPXXXXXXXXXXXXXXXXXXXXXXXXXMLDDLIGT 120

Query: 121 ESGVSLTENTEETEEKLTHAYFDRPHNCTNLHGFTEQNQR-CVPKKQFPPPIPSLATQAG 180
           +SGV L  + EE E           + C   H   ++NQ  C  KK++PPPIP LA  + 
Sbjct: 121 DSGVHLDPSEEEAEIPRMEKMEKYSNKC---HNLGKRNQELCEMKKKYPPPIPLLARTSN 180

Query: 181 QRTRSPWILTRYYSDRRLILKLERVRNHQSMESHRENGRLILNLVP-------------S 239
                P ILTR+Y D RLIL+ E+V++H+  E++RENG LIL LV               
Sbjct: 181 LDGHMPRILTRHYCDGRLILREEKVKHHEYFEAYRENGTLILKLVQLNDTVECCHSCNCE 238

The following BLAST results are available for this feature:
BLAST of Carg01478 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022939162.12.3e-16198.03uncharacterized protein LOC111445156 [Cucurbita moschata][more]
XP_023551345.13.8e-14885.58uncharacterized protein LOC111809192 [Cucurbita pepo subsp. pepo][more]
XP_022992860.12.0e-9686.70uncharacterized protein LOC111489065 [Cucurbita maxima][more]
XP_022141482.11.4e-7359.25uncharacterized protein LOC111011861 [Momordica charantia][more]
KGN51022.13.1e-6552.54hypothetical protein Csa_5G409650 [Cucumis sativus][more]
BLAST of Carg01478 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G22110.17.6e-1050.00structural constituent of ribosome[more]
BLAST of Carg01478 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg01478 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KRM2|A0A0A0KRM2_CUCSA2.0e-6552.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G409650 PE=4 SV=1[more]
tr|A0A1S4E2W2|A0A1S4E2W2_CUCME8.0e-4655.87uncharacterized protein LOC103499299 OS=Cucumis melo OX=3656 GN=LOC103499299 PE=... [more]
tr|A0A2P4JKF5|A0A2P4JKF5_QUESU1.2e-2030.90Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_57802 PE=4 SV=1[more]
tr|A0A2K2AHV4|A0A2K2AHV4_POPTR9.8e-2036.36Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G169900v3 PE=... [more]
tr|A0A067KKE3|A0A067KKE3_JATCU4.1e-1832.31Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_12002 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021410FAF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg01478-RACarg01478-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021410The fantastic four familyPFAMPF11250FAFcoord: 158..215
e-value: 8.0E-14
score: 51.5
NoneNo IPR availablePANTHERPTHR33155:SF12F2E2.18coord: 53..249
NoneNo IPR availablePANTHERPTHR33155FAMILY NOT NAMEDcoord: 53..249