CmaCh15G007290 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G007290
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Structural constituent of ribosome, putative
Location	Cma_Chr15 : 3533196 .. 3534776 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAGAAGAGGCGGAGATCAAAGGCCGTTTCGAAGTTCTGGAAGCTCTCCACTGCCGCCAATGACTTCCACCGTCCATCCTCGCCGTCGTGTAAGCTTTTCCCCTTGTCTTCTAACTTTCTTTTCAATTGTTTTTGAGATATCACTCTGTCTACACACGAACTTGTTTCGAATTCCACTCTCCGTTTCGATTCATTCAAGATTTCTGCATAATTTGTATTCATCCCGCGATTTACTCCTTATTCTTCCACTACCAAATCGGATAATCATCATACAGATTCGAAAAGATTAAAAAAGAAGAAAAATCCTAACTGATCCACTGCTTCGTGTTGAATTTCGAGTATCTTCTTACTTTGGCCGCAGATGTCTCCCCTTTTATTCATCTCGCTTCGCTTTTTTCTGCGATCACCTTCTTTTTCAAATAAACAATCATTCGCTTAAAATCTTATTTTATTATCCTTTGGACAAGACAAAACTAGGAATTTAAAGTTCAACTTCCCCGTCGTCTAGATCTCCTTCAATGGAGGATGAATTTCAGGTTGCAGTTGGAAATTTGGTAATTAAAATTAATGGCAAGCATAAGGCGTTATGAATTGCGCGAGGGCGTGAGTTGTATTGTTTGTGCGACATTGAAGCAAATACGTGGTGCAATTTTGTAGCCCACGTACGCTTCCAAATGTTGAAAAACTAGCCTCAACTCTCTTTCGAAGTGTCCTGAGTACCAAAAATCCTCAAATTCCTGTTTATTGCATTTACTGTCCTTCCAATTCAATGACACATTTTTACTAAACTTATTTCACTCACTCCCCCCCTCTTTTGGGCTCGCATTTAAATTTTTTCAAGGGCTCCGTTTCTTCATATAAACCGGAGAGCCCTTCCCTTTGTTACTTTATATATATATATACCCCCATTTCTCCACTTCTTCAAAACACATCCCCATTCTTTCCATCATCCCTCCCCCTTCTCTCTCTCTGTTGATTGAAAATTTGAAATCCCCCATTTGAACAATTCCCTATGCAGAGCAATAAGGTATCCTCCCTTGTCCCTACAGATATCAACAGCGATGATTACATAGGCTTGGAGAGTTGTGTCGATTTAAAAGGCCACCACACGGCAGCCGACATAACTCCCCTAGCGAGCTTCCCCGAGGGAGGAAATAGCAAGAGAGACAACAAAACGTCGTGGATGGGGAGGAAAAATCAGAAAAACTATCCCCCACCAATCCCATTATTGGTTCGCACTGAGAATCTGGCTTCCCACATACCATGGGTGATGAAACGGCAGTACACAGGCGATGGACGGCTCATACTGACAGAGGAGAAAGTGAAACACCACGAGTTCTTCCGTGCCCACAGATCCGATGGACGCCTGATGCTGCAGCTTGTGACCATGGACGACCAGGAGTTGGATGAGGAGGGCGATGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGTGCACGGAGGCGGGAGGGAGTGAAGGGGGGAAATGGTGCAAGTATGAGAATGTAAGGGACAGAGACACAGCGTTCATGTTCGGAGTGGAAGTGGCTGCAGGGAGCTTGAGGAGTGTTCGAGGGTAA

mRNA sequence

ATGTTGAAGAAGAGGCGGAGATCAAAGGCCGTTTCGAAGTTCTGGAAGCTCTCCACTGCCGCCAATGACTTCCACCGTCCATCCTCGCCGTCGTATATCAACAGCGATGATTACATAGGCTTGGAGAGTTGTGTCGATTTAAAAGGCCACCACACGGCAGCCGACATAACTCCCCTAGCGAGCTTCCCCGAGGGAGGAAATAGCAAGAGAGACAACAAAACGTCGTGGATGGGGAGGAAAAATCAGAAAAACTATCCCCCACCAATCCCATTATTGGTTCGCACTGAGAATCTGGCTTCCCACATACCATGGGTGATGAAACGGCAGTACACAGGCGATGGACGGCTCATACTGACAGAGGAGAAAGTGAAACACCACGAGTTCTTCCGTGCCCACAGATCCGATGGACGCCTGATGCTGCAGCTTGTGACCATGGACGACCAGGAGTTGGATGAGGAGGGCGATGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGTGCACGGAGGCGGGAGGGAGTGAAGGGGGGAAATGGTGCAAGTATGAGAATGTAAGGGACAGAGACACAGCGTTCATGTTCGGAGTGGAAGTGGCTGCAGGGAGCTTGAGGAGTGTTCGAGGGTAA

Coding sequence (CDS)

ATGTTGAAGAAGAGGCGGAGATCAAAGGCCGTTTCGAAGTTCTGGAAGCTCTCCACTGCCGCCAATGACTTCCACCGTCCATCCTCGCCGTCGTATATCAACAGCGATGATTACATAGGCTTGGAGAGTTGTGTCGATTTAAAAGGCCACCACACGGCAGCCGACATAACTCCCCTAGCGAGCTTCCCCGAGGGAGGAAATAGCAAGAGAGACAACAAAACGTCGTGGATGGGGAGGAAAAATCAGAAAAACTATCCCCCACCAATCCCATTATTGGTTCGCACTGAGAATCTGGCTTCCCACATACCATGGGTGATGAAACGGCAGTACACAGGCGATGGACGGCTCATACTGACAGAGGAGAAAGTGAAACACCACGAGTTCTTCCGTGCCCACAGATCCGATGGACGCCTGATGCTGCAGCTTGTGACCATGGACGACCAGGAGTTGGATGAGGAGGGCGATGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGTGCACGGAGGCGGGAGGGAGTGAAGGGGGGAAATGGTGCAAGTATGAGAATGTAAGGGACAGAGACACAGCGTTCATGTTCGGAGTGGAAGTGGCTGCAGGGAGCTTGAGGAGTGTTCGAGGGTAA

Protein sequence

MLKKRRRSKAVSKFWKLSTAANDFHRPSSPSYINSDDYIGLESCVDLKGHHTAADITPLASFPEGGNSKRDNKTSWMGRKNQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLMLQLVTMDDQELDEEGDEEEEEEEEEECTEAGGSEGGKWCKYENVRDRDTAFMFGVEVAAGSLRSVRG

Homology

[Close]

BLAST of CmaCh15G007290 vs. TrEMBL
Match: M5XST0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb019765mg PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.0e-27
Identity = 78/171 (45.61%), Postives = 104/171 (60.82%), Query Frame = 1


Query: 18  STAANDFHRPSSPSYINSDDYIGLESCVDLKGHHTAADITPLASFPEGGNSKRDN-KTSW 77
           S   +D   P+S S + S DYIG+ES VD++       + P     E    +  N +   
Sbjct: 43  SMMLSDLLSPTSSSLL-SGDYIGMESSVDVQKDCEKDQVVPNDDEEEEEEGQSGNFRQRL 102

Query: 78  MGRKNQK------NYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFR 137
           MGR+ QK       +PPPIPLL RTENL SH+PWV+KR YT DGRLILTEEKV+HHE+FR
Sbjct: 103 MGRREQKWAMRNKEFPPPIPLLARTENLPSHMPWVLKRHYTSDGRLILTEEKVRHHEYFR 162

Query: 138 AHRSDGRLMLQLVTMDDQEL-----------DEEGDEEEEEEEEEECTEAG 171
           AHRS+GRL LQLV +DD+ L           D  G++ E ++++ +C + G
Sbjct: 163 AHRSNGRLTLQLVPLDDEVLISPVACDEGNKDGNGNDNEYDDQDPQCDDHG 212

[Close]

BLAST of CmaCh15G007290 vs. TrEMBL
Match: B9H769_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16480g PE=4 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 1.9e-26
Identity = 85/221 (38.46%), Postives = 116/221 (52.49%), Query Frame = 1


Query: 2   LKKRRRSKAVSKFWKLSTAANDFHRPSSPSYINSDDYIGLESCVDLKGHHTAADITPLAS 61
           L+     K ++    LS++ +  +  SSPS    ++YIG+ESC+DLK +      +P   
Sbjct: 25  LETPEEEKFINSCDSLSSSNSMAYNVSSPSSSTLNEYIGMESCLDLKNNEDIFASSPKKE 84

Query: 62  FPEGGNSKRDNKTSWMGRKNQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEE 121
               G+  R+ +     +K  K +PPPIPLL RTENL SH+PWV+KR YT DGRLIL +E
Sbjct: 85  ETNYGSCNREKRDQRWAKK--KEFPPPIPLLARTENLPSHMPWVLKRYYTSDGRLILRKE 144

Query: 122 KVKHHEFFRAHRSDGRLMLQLVTMDDQ-------------------------ELDEEGDE 181
           KV+HHE+FRAHR +GRL L LV +DD+                         E DE+  E
Sbjct: 145 KVRHHEYFRAHRCNGRLTLHLVPLDDEVSALPFVFNHERRYGIENDLECNDIEEDEQVLE 204

Query: 182 EEEEEEEEE---------CTEAGGSEGGKWCKYENVRDRDT 189
           +E EEE EE           E  G++G      +NV   DT
Sbjct: 205 QEHEEELEENESLVEESTDVEVNGNDGENDYCVKNVDSDDT 243

[Close]

BLAST of CmaCh15G007290 vs. TrEMBL
Match: A0A0D2U8V7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G044800 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.6e-25
Identity = 63/129 (48.84%), Postives = 90/129 (69.77%), Query Frame = 1


Query: 37  DYIGLESCVDLKGHHTAADITPLASFPEGGNSKRDNKTSWMGRKNQKNYPPPIPLLVRTE 96
           DYIG+ESC DL  +     +       +GG   R+++    G++ +K +PPPIP L RTE
Sbjct: 42  DYIGMESCFDLYNND---QVCSGGGGGDGGRVFRESRVK-RGQRCRKEFPPPIPSLARTE 101

Query: 97  NLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLMLQLVTMDDQELDEEGDE 156
           N   H+PWV++R YT DGRLIL EEKVKHHE+FRAHRS+GRL L L+ +D+++ D + +E
Sbjct: 102 NQPPHMPWVLQRYYTNDGRLILREEKVKHHEYFRAHRSNGRLTLHLIPLDNEDNDTDVEE 161

Query: 157 EEEEEEEEE 166
           EE +EE+++
Sbjct: 162 EEAKEEDDQ 166

[Close]

BLAST of CmaCh15G007290 vs. TrEMBL
Match: A0A067KLR6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12001 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.1e-25
Identity = 75/154 (48.70%), Postives = 97/154 (62.99%), Query Frame = 1


Query: 37  DYIGLESCVDLKGHHTAADITPLASFPEGGNSKRDNKTSWMGRKNQKNYPPPIPLLVRTE 96
           DYIG+ESC+DL+ +         +S  +   +K      +   K +K +PPPIP L RT 
Sbjct: 42  DYIGVESCLDLEKNEDV-----FSSSSKKLETKILRNQRYCNIK-KKEFPPPIPSLARTG 101

Query: 97  NLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLMLQLVTMDDQ---ELDEE 156
           NL S +PWV++R YT DGRLIL EE+VKHHE+FRAHRS+GRL LQLV +DD+    LD  
Sbjct: 102 NLPSRMPWVLRRYYTNDGRLILKEERVKHHEYFRAHRSNGRLTLQLVPLDDEVYPPLDYS 161

Query: 157 GDEEEEEEEEEECTEAGGSEGGKWCKYENVRDRD 188
            DEEEEEEEEEE       EG    K+E ++  +
Sbjct: 162 DDEEEEEEEEEE-------EGDDDEKFEEIQGNE 182

[Close]

BLAST of CmaCh15G007290 vs. TrEMBL
Match: A0A0B2PAH8_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_040015 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.0e-24
Identity = 67/130 (51.54%), Postives = 81/130 (62.31%), Query Frame = 1


Query: 34  NSDDYIGLESCVDLKGHHTAADITPLASFPEGGNSKRDNKTSWMGRKNQKNYPPPIPLLV 93
           NSDDYIG ESC DL+      D        + GN  +      M  K  K +PPPIPLL 
Sbjct: 11  NSDDYIGTESCTDLQNIDHVIDNHQSFKSNDAGNKTKVKNNIKM--KENKVFPPPIPLLA 70

Query: 94  RTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLMLQLVTMDDQELDEE 153
           RT+NLASH+PWV+KR YT +GRLIL EEKVKHHE+FRAH ++GRL LQLV +   + DE 
Sbjct: 71  RTQNLASHMPWVLKRYYTNEGRLILKEEKVKHHEYFRAHSANGRLTLQLVNVPFDDHDEY 130

Query: 154 GDEEEEEEEE 164
            +E      E
Sbjct: 131 FEEATPSPHE 138

[Close]

BLAST of CmaCh15G007290 vs. TAIR10
Match: AT1G22110.1 (AT1G22110.1 structural constituent of ribosome)

HSP 1 Score: 114.8 bits (286), Expect = 6.4e-26
Identity = 69/158 (43.67%), Postives = 93/158 (58.86%), Query Frame = 1


Query: 26  RPSSPSYINSDDYIGLESCVDLKGHHTAADITPLASFP-----EGGNSKRDNKTSWMGRK 85
           R SS S     DYIG ESC D+       D+  +AS P       G  +R+ + +     
Sbjct: 40  RTSSSSSSAVGDYIGTESCFDILSADEGNDVVSVASEPVKSRFRYGGRRREEREARAAAA 99

Query: 86  NQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML 145
            +  +PPPIPLL +T NL  H+PWV+KR  T DGRLIL EEKV+HHE+FRA+RS+GRL L
Sbjct: 100 RE--FPPPIPLLAQTGNLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTL 159

Query: 146 QLVTMDDQELD--------EEGDEEEEEE--EEEECTE 169
            LV +DD   D        +  DEE+++E  +E+EC +
Sbjct: 160 HLVPLDDDVFDLPQEPSHYQSDDEEDDDECDDEDECDD 195

[Close]

BLAST of CmaCh15G007290 vs. TAIR10
Match: AT1G77932.1 (AT1G77932.1 Protein of unknown function (DUF3049))

HSP 1 Score: 75.1 bits (183), Expect = 5.7e-14
Identity = 51/128 (39.84%), Postives = 69/128 (53.91%), Query Frame = 1


Query: 28  SSPSYINSDDYIGLESCVDLKGHHTAADITPLASFPEGGNSKRDNKTSWMGRKNQKNYPP 87
           SS SY  +  YIG ESC +     T     P     E     R+  +           PP
Sbjct: 2   SSLSY--NGGYIGKESCFNAFSDKTGDVKLPCERREEKKTVAREIMS-----------PP 61

Query: 88  PIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLMLQLVTMDD 147
            +P         SH+P V+KR+YT DGRL+L EEKV  +E+FRAHRS+GRLM+QLV++D+
Sbjct: 62  MLP---------SHVPSVLKREYTSDGRLLLKEEKVCRNEYFRAHRSNGRLMIQLVSLDE 106

Query: 148 QELDEEGD 156
            + D + D
Sbjct: 122 DD-DRDSD 106

[Close]

BLAST of CmaCh15G007290 vs. NCBI nr
Match: gi|702452862|ref|XP_010026057.1| (PREDICTED: LOW QUALITY PROTEIN: nucleolar transcription factor 1 [Eucalyptus grandis])

HSP 1 Score: 136.0 bits (341), Expect = 7.6e-29
Identity = 81/155 (52.26%), Postives = 101/155 (65.16%), Query Frame = 1


Query: 28  SSPSYINSD------DYIGLESCVDL-KGHHTAADITPLASFPEGGNSKRDNKTSWM--- 87
           SS SY+ +       DYIG+ESCVD  +      D+ P    PE G   R   T      
Sbjct: 26  SSSSYMEASSFPLIGDYIGVESCVDYGEPPDPGGDLPPAE--PERGPGWRREATGGRRRR 85

Query: 88  -GRKNQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDG 147
            GR+ ++ YPPPIPLL RT NL SH+PWV++RQYT DGRLILTEEKV+HHE+FRAHR++G
Sbjct: 86  RGREARREYPPPIPLLARTGNLPSHMPWVLRRQYTSDGRLILTEEKVRHHEYFRAHRANG 145

Query: 148 RLMLQLVTMDDQE------LDEEGDEEEEEEEEEE 166
           RL L LV +D  +      +DEE +EEEEEEE+EE
Sbjct: 146 RLTLHLVPLDGDDPCLSTIVDEEEEEEEEEEEDEE 178

[Close]

BLAST of CmaCh15G007290 vs. NCBI nr
Match: gi|596297876|ref|XP_007227402.1| (hypothetical protein PRUPE_ppb019765mg [Prunus persica])

HSP 1 Score: 131.7 bits (330), Expect = 1.4e-27
Identity = 78/171 (45.61%), Postives = 104/171 (60.82%), Query Frame = 1


Query: 18  STAANDFHRPSSPSYINSDDYIGLESCVDLKGHHTAADITPLASFPEGGNSKRDN-KTSW 77
           S   +D   P+S S + S DYIG+ES VD++       + P     E    +  N +   
Sbjct: 43  SMMLSDLLSPTSSSLL-SGDYIGMESSVDVQKDCEKDQVVPNDDEEEEEEGQSGNFRQRL 102

Query: 78  MGRKNQK------NYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFR 137
           MGR+ QK       +PPPIPLL RTENL SH+PWV+KR YT DGRLILTEEKV+HHE+FR
Sbjct: 103 MGRREQKWAMRNKEFPPPIPLLARTENLPSHMPWVLKRHYTSDGRLILTEEKVRHHEYFR 162

Query: 138 AHRSDGRLMLQLVTMDDQEL-----------DEEGDEEEEEEEEEECTEAG 171
           AHRS+GRL LQLV +DD+ L           D  G++ E ++++ +C + G
Sbjct: 163 AHRSNGRLTLQLVPLDDEVLISPVACDEGNKDGNGNDNEYDDQDPQCDDHG 212

[Close]

BLAST of CmaCh15G007290 vs. NCBI nr
Match: gi|645279997|ref|XP_008244987.1| (PREDICTED: uncharacterized protein LOC103343086 [Prunus mume])

HSP 1 Score: 130.2 bits (326), Expect = 4.2e-27
Identity = 72/152 (47.37%), Postives = 98/152 (64.47%), Query Frame = 1


Query: 22  NDFHRPSSPSYINSDDYIGLESCVDLKGHHTAADITPLASFPEGGNSKRDNKTSWMGRK- 81
           +DF  P+SPS + S DYIG++SCVD+           L   P   + + +    W  +K 
Sbjct: 5   DDFSPPTSPSLLTSGDYIGMQSCVDVLTDEELG-FGRLRHKPNRFSKREERSLRWAPKKM 64

Query: 82  NQKNY---PPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGR 141
             K+Y   PPPIP L RTENL SH+PW++KR YT DGRLIL EEKV+HHE+FRAHRS+GR
Sbjct: 65  KMKDYMEVPPPIPSLARTENLPSHMPWILKRHYTTDGRLILIEEKVRHHEYFRAHRSNGR 124

Query: 142 LMLQLVTMDDQEL-DEEGDEEEEEEEEEECTE 169
           L LQLV +DD  L      + ++++++E C+E
Sbjct: 125 LRLQLVPLDDDVLVPPVACDGDDDDDDEYCSE 155

[Close]

BLAST of CmaCh15G007290 vs. NCBI nr
Match: gi|694316457|ref|XP_009334048.1| (PREDICTED: uncharacterized protein LOC103926888, partial [Pyrus x bretschneideri])

HSP 1 Score: 129.0 bits (323), Expect = 9.4e-27
Identity = 76/164 (46.34%), Postives = 100/164 (60.98%), Query Frame = 1


Query: 17  LSTAANDFHRPSSPSYINSD------DYIGLESCVDLKGHHTAADITPLASFPEGGNSKR 76
           + T  +D   P+S S  +SD      DY+G+ESCVD+     + D    +S      S+R
Sbjct: 61  IDTMISDLFSPTSSSSASSDSLLMSGDYLGMESCVDV----LSDDELSFSSCHHDCYSQR 120

Query: 77  DNKTSWMGRKNQKN----YPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHH 136
             +  W   K +K      PPP+ LL RTENL SH+PWV+KR YT DGRLILTEEKV+HH
Sbjct: 121 KERLCWAREKEKKRTYEELPPPLSLLARTENLPSHMPWVLKRHYTTDGRLILTEEKVRHH 180

Query: 137 EFFRAHRSDGRLMLQLVTMDDQEL-------DEEGDEEEEEEEE 164
           E+FRAHRS+GRL LQLV +D Q L       D++ DEEE ++ +
Sbjct: 181 EYFRAHRSNGRLRLQLVPLDGQVLVPPVVCCDDDHDEEEVDDND 220

[Close]

BLAST of CmaCh15G007290 vs. NCBI nr
Match: gi|645256504|ref|XP_008233982.1| (PREDICTED: uncharacterized protein LOC103332972 [Prunus mume])

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26
Identity = 76/173 (43.93%), Postives = 103/173 (59.54%), Query Frame = 1


Query: 18  STAANDFHRPSSPSYINSDDYIGLESCVDLKGHHTAADITPLASFPEGGNSKRDNKTSWM 77
           S   +D   P+S S + S DYIG+ES VD++       +       E      + +   M
Sbjct: 43  SMMLSDLLSPTSSSLL-SGDYIGMESSVDVQKDCEEDQVVQNDDEEEEEGQGGNFRQRLM 102

Query: 78  GRKNQK------NYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRA 137
           GR+ QK       +PPPIPLL RTENL SH+PWV+KR YT DGRLILTEEKV+HHE+FRA
Sbjct: 103 GRREQKWAMRNKEFPPPIPLLARTENLPSHMPWVLKRHYTSDGRLILTEEKVRHHEYFRA 162

Query: 138 HRSDGRLMLQLVTMDDQEL-----------DEEGDEEEEEEEEEECTEAGGSE 174
           HRS+GRL LQLV +DD+ L           D  G++ E ++++ +C + G  +
Sbjct: 163 HRSNGRLTLQLVPLDDEVLIAPVACDEGNKDGNGNDNEYDDQDPQCDDHGDDD 214

The following BLAST results are available for this feature:

BLAST of CmaCh15G007290 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh15G007290 vs. TrEMBL


Match Name	E-value	Identity	Description
M5XST0_PRUPE	1.0e-27	45.61	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb019765mg PE=4 SV=1	[more]
B9H769_POPTR	1.9e-26	38.46	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16480g PE=4 SV=2	[more]
A0A0D2U8V7_GOSRA	3.6e-25	48.84	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G044800 PE=4 SV=1	[more]
A0A067KLR6_JATCU	6.1e-25	48.70	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12001 PE=4 SV=1	[more]
A0A0B2PAH8_GLYSO	1.0e-24	51.54	Uncharacterized protein OS=Glycine soja GN=glysoja_040015 PE=4 SV=1	[more]

BLAST of CmaCh15G007290 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22110.1	6.4e-26	43.67	structural constituent of ribosome	[more]
AT1G77932.1	5.7e-14	39.84	Protein of unknown function (DUF3049)	[more]

BLAST of CmaCh15G007290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|702452862\|ref\|XP_010026057.1\|	7.6e-29	52.26	PREDICTED: LOW QUALITY PROTEIN: nucleolar transcription factor 1 [Eucalyptus gra...	[more]
gi\|596297876\|ref\|XP_007227402.1\|	1.4e-27	45.61	hypothetical protein PRUPE_ppb019765mg [Prunus persica]	[more]
gi\|645279997\|ref\|XP_008244987.1\|	4.2e-27	47.37	PREDICTED: uncharacterized protein LOC103343086 [Prunus mume]	[more]
gi\|694316457\|ref\|XP_009334048.1\|	9.4e-27	46.34	PREDICTED: uncharacterized protein LOC103926888, partial [Pyrus x bretschneideri...	[more]
gi\|645256504\|ref\|XP_008233982.1\|	1.2e-26	43.93	PREDICTED: uncharacterized protein LOC103332972 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021410	FAF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G007290.1	CmaCh15G007290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 84..142 score: 1.2
None	No IPR available	unknown	Coil	Coil	coord: 145..165 scor
None	No IPR available	PANTHER	PTHR33155	FAMILY NOT NAMED	coord: 26..165 score: 3.9
None	No IPR available	PANTHER	PTHR33155:SF12	F2E2.18	coord: 26..165 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G007290	Cucsa.034610	Cucumber (Gy14) v1	cgycmaB0019
CmaCh15G007290	Cla019784	Watermelon (97103) v1	cmawmB264
CmaCh15G007290	Csa5G409630	Cucumber (Chinese Long) v2	cmacuB293
CmaCh15G007290	MELO3C022816	Melon (DHL92) v3.5.1	cmameB252
CmaCh15G007290	ClCG03G008910	Watermelon (Charleston Gray)	cmawcgB261
CmaCh15G007290	CSPI05G14690	Wild cucumber (PI 183967)	cmacpiB297
CmaCh15G007290	CmoCh04G024140	Cucurbita moschata (Rifu)	cmacmoB309
CmaCh15G007290	Lsi09G009530	Bottle gourd (USVL1VR-Ls)	cmalsiB268
CmaCh15G007290	Cp4.1LG13g05060	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G007290	Cp4.1LG01g20160	Cucurbita pepo (Zucchini)	cmacpeB318
CmaCh15G007290	MELO3C022816.2	Melon (DHL92) v3.6.1	cmamedB287
CmaCh15G007290	CsaV3_5G023810	Cucumber (Chinese Long) v3	cmacucB0343
CmaCh15G007290	Cla97C03G060100	Watermelon (97103) v2	cmawmbB300
CmaCh15G007290	Bhi12G001095	Wax gourd	cmawgoB0373
CmaCh15G007290	CsGy5G014610	Cucumber (Gy14) v2	cgybcmaB600
CmaCh15G007290	Carg01478	Silver-seed gourd	carcmaB1148
CmaCh15G007290	Carg18252	Silver-seed gourd	carcmaB0737

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh15G007290	CmaCh04G023110	Cucurbita maxima (Rimu)	cmacmaB325

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G007290	Cucurbita moschata (Rifu)	cmacmoB287