CsaV3_5G023810 (gene) Cucumber (Chinese Long) v3

NameCsaV3_5G023810
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionProtein FANTASTIC FOUR 1-like
Locationchr5 : 18255333 .. 18255949 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCCTCTCTTCTTTTGGACTCTCTCATTTAAATATATTTCTTAAAGAAAACAAAACATAGTAATTAAGCCTTCTCTTCATTAATATATATAACCCCATTATTCCTCCATTTCTTTAAAAAAGAAAAAGAAAAAGAAAAAGAAGAAAAAACCCATCCCCATTTCTTCAATCTCTCTCTAAATTTGAAGAATTTAAAATATGGAGAGCAAGAAGGTCCTGTCGCCTGTTTCTAGAGATTTCAATATCGATGATTACATAGGGATGGAAAGTTGTGTGGATTTGAAAGACCACCACAAGAGTACGGCGGAGATTTCGTCCACCAAGAGGTTAATGCAGATCGGAAACAAGAAAATGAAAGATGAGAAAGAGTACCCTCCGCCAATCCCATTGTTGGTGGTGATGAAACGGCAGTACACCGGCGACGGGAGGCTGATACTGACGGAAGAGAAAATTAAACACCGTGGGTTCTTGCGTGCACAGAGATCCGATGGGCGGCTGATGCTGCAGCTTGTGGCGGTGGAGGTGGGGGAGGAGCGGCGGAGAGATGCAGGGGGGTTTGTGTTGGGAGTGGCAGTGTGACCTAATGGAACCCTGAAAGCCGTTGGAGGCTAACCAAAT

mRNA sequence

ATGGAGAGCAAGAAGGTCCTGTCGCCTGTTTCTAGAGATTTCAATATCGATGATTACATAGGGATGGAAAGTTGTGTGGATTTGAAAGACCACCACAAGAGTACGGCGGAGATTTCGTCCACCAAGAGGTTAATGCAGATCGGAAACAAGAAAATGAAAGATGAGAAAGAGTACCCTCCGCCAATCCCATTGTTGGTGGTGATGAAACGGCAGTACACCGGCGACGGGAGGCTGATACTGACGGAAGAGAAAATTAAACACCGTGGGTTCTTGCGTGCACAGAGATCCGATGGGCGGCTGATGCTGCAGCTTGTGGCGGTGGAGGTGGGGGAGGAGCGGCGGAGAGATGCAGGGGGGTTTGTGTTGGGAGTGGCAGTGTGA

Coding sequence (CDS)

ATGGAGAGCAAGAAGGTCCTGTCGCCTGTTTCTAGAGATTTCAATATCGATGATTACATAGGGATGGAAAGTTGTGTGGATTTGAAAGACCACCACAAGAGTACGGCGGAGATTTCGTCCACCAAGAGGTTAATGCAGATCGGAAACAAGAAAATGAAAGATGAGAAAGAGTACCCTCCGCCAATCCCATTGTTGGTGGTGATGAAACGGCAGTACACCGGCGACGGGAGGCTGATACTGACGGAAGAGAAAATTAAACACCGTGGGTTCTTGCGTGCACAGAGATCCGATGGGCGGCTGATGCTGCAGCTTGTGGCGGTGGAGGTGGGGGAGGAGCGGCGGAGAGATGCAGGGGGGTTTGTGTTGGGAGTGGCAGTGTGA

Protein sequence

MESKKVLSPVSRDFNIDDYIGMESCVDLKDHHKSTAEISSTKRLMQIGNKKMKDEKEYPPPIPLLVVMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVGEERRRDAGGFVLGVAV
BLAST of CsaV3_5G023810 vs. NCBI nr
Match: XP_011656213.1 (PREDICTED: uncharacterized protein LOC105435672 [Cucumis sativus] >KGN51020.1 hypothetical protein Csa_5G409630 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 2.0e-63
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0

Query: 1   MESKKVLSPVSRDFNIDDYIGMESCVDLKDHHKSTAEISSTKRLMQIGNKKMKDEKEYPP 60
           MESKKVLSPVSRDFNIDDYIGMESCVDLKDHHKSTAEISSTKRLMQIGNKKMKDEKEYPP
Sbjct: 1   MESKKVLSPVSRDFNIDDYIGMESCVDLKDHHKSTAEISSTKRLMQIGNKKMKDEKEYPP 60

Query: 61  PIPLLVVMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVGEERRRDAGGF 120
           PIPLLVVMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVGEERRRDAGGF
Sbjct: 61  PIPLLVVMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVGEERRRDAGGF 120

Query: 121 VLGVAV 127
           VLGVAV
Sbjct: 121 VLGVAV 126

BLAST of CsaV3_5G023810 vs. NCBI nr
Match: XP_008460498.1 (PREDICTED: uncharacterized protein LOC103499298 [Cucumis melo])

HSP 1 Score: 241.1 bits (614), Expect = 2.0e-60
Identity = 120/126 (95.24%), Postives = 123/126 (97.62%), Query Frame = 0

Query: 1   MESKKVLSPVSRDFNIDDYIGMESCVDLKDHHKSTAEISSTKRLMQIGNKKMKDEKEYPP 60
           MESKKVLSPVSRDFNIDDYIGMESCVDLK+HHKSTAEIS TKRLMQIGNKKMKDEKEYPP
Sbjct: 1   MESKKVLSPVSRDFNIDDYIGMESCVDLKNHHKSTAEISPTKRLMQIGNKKMKDEKEYPP 60

Query: 61  PIPLLVVMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVGEERRRDAGGF 120
           PIPLLVVMKR YTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEV EER+RDAGGF
Sbjct: 61  PIPLLVVMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVAEERQRDAGGF 120

Query: 121 VLGVAV 127
           +LGVAV
Sbjct: 121 ILGVAV 126

BLAST of CsaV3_5G023810 vs. NCBI nr
Match: XP_022992861.1 (uncharacterized protein LOC111489066 [Cucurbita maxima])

HSP 1 Score: 124.8 bits (312), Expect = 2.1e-25
Identity = 71/126 (56.35%), Postives = 81/126 (64.29%), Query Frame = 0

Query: 3   SKKVLSPVSRDFNIDDYIGMESCVDLKDHHKSTAEISSTKRLMQIGNKK---------MK 62
           S KV S V  D N DDYIG+ESCVDLK HH + A+I+      + GN K          K
Sbjct: 11  SNKVSSLVPTDINSDDYIGLESCVDLKGHH-TAADITPLASFPEGGNSKRDNKTSWMGRK 70

Query: 63  DEKEYPPPIPLLV-----------VMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLML 109
           ++K YPPPIPLLV           VMKRQYTGDGRLILTEEK+KH  F RA RSDGRLML
Sbjct: 71  NQKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML 130

BLAST of CsaV3_5G023810 vs. NCBI nr
Match: XP_023551237.1 (uncharacterized protein LOC111809117 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 123.6 bits (309), Expect = 4.7e-25
Identity = 71/125 (56.80%), Postives = 80/125 (64.00%), Query Frame = 0

Query: 3   SKKVLSPVSRDFNIDDYIGMESCVDLKDHH--------KSTAEISSTKRLMQIGNKKMKD 62
           S KV S V  D N DDYIG+ESCVDLKDH          S  E  ++KR ++      KD
Sbjct: 11  SNKVSSLVPSDINSDDYIGVESCVDLKDHDTAVDTTPLASFPEGGNSKRDIKTSWMGRKD 70

Query: 63  EKEYPPPIPLLV-----------VMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQ 109
           +K YPPPIPLLV           VMKRQYTGDGRLILTEEK+KH  F RA RSDGRLMLQ
Sbjct: 71  QKNYPPPIPLLVRTENLASHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLMLQ 130

BLAST of CsaV3_5G023810 vs. NCBI nr
Match: XP_022939970.1 (uncharacterized protein LOC111445672 [Cucurbita moschata])

HSP 1 Score: 122.9 bits (307), Expect = 8.0e-25
Identity = 71/126 (56.35%), Postives = 81/126 (64.29%), Query Frame = 0

Query: 3   SKKVLSPVSRDFNIDDYIGMESCVDLKDHHKSTAEISSTKRLMQIGNKK---------MK 62
           S KV S V  D N DDYIG+ESCVDLKD + + A+I+      + GN K          K
Sbjct: 11  SNKVSSLVPSDINSDDYIGVESCVDLKD-NDTAADITPLASFPEGGNSKRDIKTSWMGRK 70

Query: 63  DEKEYPPPIPLLV-----------VMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLML 109
           D+K YPPPIPLLV           VMKRQYTGDGRLILTEEK+KH  F RA RSDGRLML
Sbjct: 71  DQKNYPPPIPLLVRTENLGSHIPWVMKRQYTGDGRLILTEEKVKHHEFFRAHRSDGRLML 130

BLAST of CsaV3_5G023810 vs. TAIR10
Match: AT1G22110.1 (structural constituent of ribosome)

HSP 1 Score: 72.0 bits (175), Expect = 2.9e-13
Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 0

Query: 16  IDDYIGMESCVDL--KDHHKSTAEISS--TKRLMQIGNKKMK-------DEKEYPPPIPL 75
           + DYIG ESC D+   D       ++S   K   + G ++ +         +E+PPPIPL
Sbjct: 49  VGDYIGTESCFDILSADEGNDVVSVASEPVKSRFRYGGRRREXXXXXXXXAREFPPPIPL 108

Query: 76  LV-----------VMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVE 109
           L            V+KR  T DGRLIL EEK++H  + RA RS+GRL L LV ++
Sbjct: 109 LAQTGNLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTLHLVPLD 163

BLAST of CsaV3_5G023810 vs. TAIR10
Match: AT1G77932.1 (Protein of unknown function (DUF3049))

HSP 1 Score: 66.6 bits (161), Expect = 1.2e-11
Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = 0

Query: 19  YIGMESCVDLKDHHKSTAEISSTKRLMQIGNKKMKDEKEYPPPIPLLV--VMKRQYTGDG 78
           YIG ESC +         ++   +R  +   K +  E   PP +P  V  V+KR+YT DG
Sbjct: 10  YIGKESCFNAFSDKTGDVKLPCERREEK---KTVAREIMSPPMLPSHVPSVLKREYTSDG 69

Query: 79  RLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVGEERRRD 117
           RL+L EEK+    + RA RS+GRLM+QLV+++  ++R  D
Sbjct: 70  RLLLKEEKVCRNEYFRAHRSNGRLMIQLVSLDEDDDRDSD 106

BLAST of CsaV3_5G023810 vs. TAIR10
Match: AT5G22390.1 (Protein of unknown function (DUF3049))

HSP 1 Score: 45.4 bits (106), Expect = 3.0e-05
Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 0

Query: 51  KMKDEKEYPPPIPLLVVMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRL 101
           + K+ KEYPP +  +    + Y  +GRL+L E +I  R FLRA R DGRL
Sbjct: 128 RRKERKEYPPAMTRMSF--KTYRKEGRLVLEEVRIPRREFLRASREDGRL 175

BLAST of CsaV3_5G023810 vs. TrEMBL
Match: tr|A0A0A0KN42|A0A0A0KN42_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G409630 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.3e-63
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0

Query: 1   MESKKVLSPVSRDFNIDDYIGMESCVDLKDHHKSTAEISSTKRLMQIGNKKMKDEKEYPP 60
           MESKKVLSPVSRDFNIDDYIGMESCVDLKDHHKSTAEISSTKRLMQIGNKKMKDEKEYPP
Sbjct: 1   MESKKVLSPVSRDFNIDDYIGMESCVDLKDHHKSTAEISSTKRLMQIGNKKMKDEKEYPP 60

Query: 61  PIPLLVVMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVGEERRRDAGGF 120
           PIPLLVVMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVGEERRRDAGGF
Sbjct: 61  PIPLLVVMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVGEERRRDAGGF 120

Query: 121 VLGVAV 127
           VLGVAV
Sbjct: 121 VLGVAV 126

BLAST of CsaV3_5G023810 vs. TrEMBL
Match: tr|A0A1S3CCL8|A0A1S3CCL8_CUCME (uncharacterized protein LOC103499298 OS=Cucumis melo OX=3656 GN=LOC103499298 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.3e-60
Identity = 120/126 (95.24%), Postives = 123/126 (97.62%), Query Frame = 0

Query: 1   MESKKVLSPVSRDFNIDDYIGMESCVDLKDHHKSTAEISSTKRLMQIGNKKMKDEKEYPP 60
           MESKKVLSPVSRDFNIDDYIGMESCVDLK+HHKSTAEIS TKRLMQIGNKKMKDEKEYPP
Sbjct: 1   MESKKVLSPVSRDFNIDDYIGMESCVDLKNHHKSTAEISPTKRLMQIGNKKMKDEKEYPP 60

Query: 61  PIPLLVVMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVGEERRRDAGGF 120
           PIPLLVVMKR YTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEV EER+RDAGGF
Sbjct: 61  PIPLLVVMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVAEERQRDAGGF 120

Query: 121 VLGVAV 127
           +LGVAV
Sbjct: 121 ILGVAV 126

BLAST of CsaV3_5G023810 vs. TrEMBL
Match: tr|A0A1Q3AU84|A0A1Q3AU84_CEPFO (DUF3049 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_02828 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.5e-16
Identity = 54/122 (44.26%), Postives = 77/122 (63.11%), Query Frame = 0

Query: 2   ESKKVLSPVSRDFNIDDYIGMESCVDLKDHHKSTAEISSTKRLMQIGNKK----MKDEKE 61
           +S  +LSP +  F + DYIGMESC+DLK++++     ++      I +K+       + E
Sbjct: 22  DSNIMLSPTNTSF-LGDYIGMESCLDLKNNNEDIVCATNDDVYDHIRDKRDQRWAMKKIE 81

Query: 62  YPPPIPLLV-----------VMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVA 109
           +PPPI LL            V+KRQYTGDGRLILTEE+++H  +LRA RS+GRL LQLV 
Sbjct: 82  FPPPITLLARTENLHSHMPWVLKRQYTGDGRLILTEERVRHHEYLRAHRSNGRLTLQLVP 141

BLAST of CsaV3_5G023810 vs. TrEMBL
Match: tr|A0A2N9IHK9|A0A2N9IHK9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53119 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.9e-16
Identity = 53/114 (46.49%), Postives = 69/114 (60.53%), Query Frame = 0

Query: 14  FNIDDYIGMESCVDLKDH--------HKSTAEISSTKRLMQIGNKKMKDEKEYPPPIPLL 73
           ++I DYIGMESC+DL D          +S +E+   K   +   +  K +KE+PPPIPLL
Sbjct: 8   WSIGDYIGMESCLDLNDEVHSLESSGVESDSEVYIKKCRGKRDQRLAKMQKEFPPPIPLL 67

Query: 74  V-----------VMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVE 109
                       V+KR YT DGRLILTEEK+KH  + RA R+DGRL LQLV ++
Sbjct: 68  ARTENLPCHMPWVLKRHYTSDGRLILTEEKVKHHEYFRAHRADGRLTLQLVPLD 121

BLAST of CsaV3_5G023810 vs. TrEMBL
Match: tr|I1MAQ1|I1MAQ1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=102664674 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.0e-15
Identity = 53/119 (44.54%), Postives = 69/119 (57.98%), Query Frame = 0

Query: 6   VLSPVSRDFNIDDYIGMESCVDLK------DHHKSTAEISSTKRLMQIGNKKMKDEKEYP 65
           V+S ++   N DDYIG ESC DL+      D+H+S     +  +     N KMK+ K +P
Sbjct: 2   VMSSITFPPNSDDYIGTESCTDLQNIDHVIDNHQSFKSNDAGNKTKVKNNIKMKENKVFP 61

Query: 66  PPIPLLV-----------VMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAV 108
           PPIPLL            V+KR YT +GRLIL EEK+KH  + RA  ++GRL LQLV V
Sbjct: 62  PPIPLLARTQNLASHMPWVLKRYYTNEGRLILKEEKVKHHEYFRAHSANGRLTLQLVNV 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011656213.12.0e-63100.00PREDICTED: uncharacterized protein LOC105435672 [Cucumis sativus] >KGN51020.1 hy... [more]
XP_008460498.12.0e-6095.24PREDICTED: uncharacterized protein LOC103499298 [Cucumis melo][more]
XP_022992861.12.1e-2556.35uncharacterized protein LOC111489066 [Cucurbita maxima][more]
XP_023551237.14.7e-2556.80uncharacterized protein LOC111809117 [Cucurbita pepo subsp. pepo][more]
XP_022939970.18.0e-2556.35uncharacterized protein LOC111445672 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT1G22110.12.9e-1338.26structural constituent of ribosome[more]
AT1G77932.11.2e-1139.00Protein of unknown function (DUF3049)[more]
AT5G22390.13.0e-0546.00Protein of unknown function (DUF3049)[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KN42|A0A0A0KN42_CUCSA1.3e-63100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G409630 PE=4 SV=1[more]
tr|A0A1S3CCL8|A0A1S3CCL8_CUCME1.3e-6095.24uncharacterized protein LOC103499298 OS=Cucumis melo OX=3656 GN=LOC103499298 PE=... [more]
tr|A0A1Q3AU84|A0A1Q3AU84_CEPFO4.5e-1644.26DUF3049 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_... [more]
tr|A0A2N9IHK9|A0A2N9IHK9_FAGSY5.9e-1646.49Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53119 PE=4 SV=1[more]
tr|I1MAQ1|I1MAQ1_SOYBN1.0e-1544.54Uncharacterized protein OS=Glycine max OX=3847 GN=102664674 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021410FAF
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G023810.1CsaV3_5G023810.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021410The fantastic four familyPFAMPF11250FAFcoord: 57..104
e-value: 2.0E-16
score: 59.9
NoneNo IPR availablePANTHERPTHR33155FAMILY NOT NAMEDcoord: 15..110
NoneNo IPR availablePANTHERPTHR33155:SF12F2E2.18coord: 15..110