CsaV3_5G023810 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCCCTCTCTTCTTTTGGACTCTCTCATTTAAATATATTTCTTAAAGAAAACAAAACATAGTAATTAAGCCTTCTCTTCATTAATATATATAACCCCATTATTCCTCCATTTCTTTAAAAAAGAAAAAGAAAAAGAAAAAGAAGAAAAAACCCATCCCCATTTCTTCAATCTCTCTCTAAATTTGAAGAATTTAAAATATGGAGAGCAAGAAGGTCCTGTCGCCTGTTTCTAGAGATTTCAATATCGATGATTACATAGGGATGGAAAGTTGTGTGGATTTGAAAGACCACCACAAGAGTACGGCGGAGATTTCGTCCACCAAGAGGTTAATGCAGATCGGAAACAAGAAAATGAAAGATGAGAAAGAGTACCCTCCGCCAATCCCATTGTTGGTGGTGATGAAACGGCAGTACACCGGCGACGGGAGGCTGATACTGACGGAAGAGAAAATTAAACACCGTGGGTTCTTGCGTGCACAGAGATCCGATGGGCGGCTGATGCTGCAGCTTGTGGCGGTGGAGGTGGGGGAGGAGCGGCGGAGAGATGCAGGGGGGTTTGTGTTGGGAGTGGCAGTGTGACCTAATGGAACCCTGAAAGCCGTTGGAGGCTAACCAAAT ATGGAGAGCAAGAAGGTCCTGTCGCCTGTTTCTAGAGATTTCAATATCGATGATTACATAGGGATGGAAAGTTGTGTGGATTTGAAAGACCACCACAAGAGTACGGCGGAGATTTCGTCCACCAAGAGGTTAATGCAGATCGGAAACAAGAAAATGAAAGATGAGAAAGAGTACCCTCCGCCAATCCCATTGTTGGTGGTGATGAAACGGCAGTACACCGGCGACGGGAGGCTGATACTGACGGAAGAGAAAATTAAACACCGTGGGTTCTTGCGTGCACAGAGATCCGATGGGCGGCTGATGCTGCAGCTTGTGGCGGTGGAGGTGGGGGAGGAGCGGCGGAGAGATGCAGGGGGGTTTGTGTTGGGAGTGGCAGTGTGA ATGGAGAGCAAGAAGGTCCTGTCGCCTGTTTCTAGAGATTTCAATATCGATGATTACATAGGGATGGAAAGTTGTGTGGATTTGAAAGACCACCACAAGAGTACGGCGGAGATTTCGTCCACCAAGAGGTTAATGCAGATCGGAAACAAGAAAATGAAAGATGAGAAAGAGTACCCTCCGCCAATCCCATTGTTGGTGGTGATGAAACGGCAGTACACCGGCGACGGGAGGCTGATACTGACGGAAGAGAAAATTAAACACCGTGGGTTCTTGCGTGCACAGAGATCCGATGGGCGGCTGATGCTGCAGCTTGTGGCGGTGGAGGTGGGGGAGGAGCGGCGGAGAGATGCAGGGGGGTTTGTGTTGGGAGTGGCAGTGTGA MESKKVLSPVSRDFNIDDYIGMESCVDLKDHHKSTAEISSTKRLMQIGNKKMKDEKEYPPPIPLLVVMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVGEERRRDAGGFVLGVAV
BLAST of CsaV3_5G023810 vs. NCBI nr
Match: XP_011656213.1 (PREDICTED: uncharacterized protein LOC105435672 [Cucumis sativus] >KGN51020.1 hypothetical protein Csa_5G409630 [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 2.0e-63 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. NCBI nr
Match: XP_008460498.1 (PREDICTED: uncharacterized protein LOC103499298 [Cucumis melo]) HSP 1 Score: 241.1 bits (614), Expect = 2.0e-60 Identity = 120/126 (95.24%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. NCBI nr
Match: XP_022992861.1 (uncharacterized protein LOC111489066 [Cucurbita maxima]) HSP 1 Score: 124.8 bits (312), Expect = 2.1e-25 Identity = 71/126 (56.35%), Postives = 81/126 (64.29%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. NCBI nr
Match: XP_023551237.1 (uncharacterized protein LOC111809117 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 123.6 bits (309), Expect = 4.7e-25 Identity = 71/125 (56.80%), Postives = 80/125 (64.00%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. NCBI nr
Match: XP_022939970.1 (uncharacterized protein LOC111445672 [Cucurbita moschata]) HSP 1 Score: 122.9 bits (307), Expect = 8.0e-25 Identity = 71/126 (56.35%), Postives = 81/126 (64.29%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. TAIR10
Match: AT1G22110.1 (structural constituent of ribosome) HSP 1 Score: 72.0 bits (175), Expect = 2.9e-13 Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. TAIR10
Match: AT1G77932.1 (Protein of unknown function (DUF3049)) HSP 1 Score: 66.6 bits (161), Expect = 1.2e-11 Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. TAIR10
Match: AT5G22390.1 (Protein of unknown function (DUF3049)) HSP 1 Score: 45.4 bits (106), Expect = 3.0e-05 Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. TrEMBL
Match: tr|A0A0A0KN42|A0A0A0KN42_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G409630 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 1.3e-63 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. TrEMBL
Match: tr|A0A1S3CCL8|A0A1S3CCL8_CUCME (uncharacterized protein LOC103499298 OS=Cucumis melo OX=3656 GN=LOC103499298 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.3e-60 Identity = 120/126 (95.24%), Postives = 123/126 (97.62%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. TrEMBL
Match: tr|A0A1Q3AU84|A0A1Q3AU84_CEPFO (DUF3049 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_02828 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 4.5e-16 Identity = 54/122 (44.26%), Postives = 77/122 (63.11%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. TrEMBL
Match: tr|A0A2N9IHK9|A0A2N9IHK9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53119 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 5.9e-16 Identity = 53/114 (46.49%), Postives = 69/114 (60.53%), Query Frame = 0
BLAST of CsaV3_5G023810 vs. TrEMBL
Match: tr|I1MAQ1|I1MAQ1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=102664674 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.0e-15 Identity = 53/119 (44.54%), Postives = 69/119 (57.98%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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