MELO3C022816 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C022816
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Protein of unknown function (DUF3049)
Location	chr9 : 12306694 .. 12307074 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGCAAGAAGGTTCTGTCCCCTGTTTCTAGAGATTTCAACATCGATGATTACATAGGGATGGAAAGTTGTGTGGATTTGAAAAACCATCACAAGAGTACGGCGGAGATTTCGCCCACCAAGAGGTTAATGCAGATCGGAAACAAGAAAATGAAAGATGAGAAAGAGTATCCTCCGCCAATCCCATTGTTAGTGGTGATGAAACGGCACTACACCGGCGACGGGAGGCTGATACTAACGGAAGAGAAAATTAAACACCGTGGGTTCTTGCGTGCACAGAGATCCGATGGGCGGCTGATGCTGCAGCTTGTGGCGGTGGAGGTGGCGGAGGAGCGGCAGAGAGATGCAGGGGGGTTTATATTGGGAGTGGCAGTGTGA

mRNA sequence

ATGGAGAGCAAGAAGGTTCTGTCCCCTGTTTCTAGAGATTTCAACATCGATGATTACATAGGGATGGAAAGTTGTGTGGATTTGAAAAACCATCACAAGAGTACGGCGGAGATTTCGCCCACCAAGAGGTTAATGCAGATCGGAAACAAGAAAATGAAAGATGAGAAAGAGTATCCTCCGCCAATCCCATTGTTAGTGGTGATGAAACGGCACTACACCGGCGACGGGAGGCTGATACTAACGGAAGAGAAAATTAAACACCGTGGGTTCTTGCGTGCACAGAGATCCGATGGGCGGCTGATGCTGCAGCTTGTGGCGGTGGAGGTGGCGGAGGAGCGGCAGAGAGATGCAGGGGGGTTTATATTGGGAGTGGCAGTGTGA

Coding sequence (CDS)

ATGGAGAGCAAGAAGGTTCTGTCCCCTGTTTCTAGAGATTTCAACATCGATGATTACATAGGGATGGAAAGTTGTGTGGATTTGAAAAACCATCACAAGAGTACGGCGGAGATTTCGCCCACCAAGAGGTTAATGCAGATCGGAAACAAGAAAATGAAAGATGAGAAAGAGTATCCTCCGCCAATCCCATTGTTAGTGGTGATGAAACGGCACTACACCGGCGACGGGAGGCTGATACTAACGGAAGAGAAAATTAAACACCGTGGGTTCTTGCGTGCACAGAGATCCGATGGGCGGCTGATGCTGCAGCTTGTGGCGGTGGAGGTGGCGGAGGAGCGGCAGAGAGATGCAGGGGGGTTTATATTGGGAGTGGCAGTGTGA

Protein sequence

MESKKVLSPVSRDFNIDDYIGMESCVDLKNHHKSTAEISPTKRLMQIGNKKMKDEKEYPPPIPLLVVMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVAEERQRDAGGFILGVAV*

Homology

[Close]

BLAST of MELO3C022816 vs. TrEMBL
Match: A0A0A0KN42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G409630 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 7.3e-61
Identity = 120/126 (95.24%), Postives = 123/126 (97.62%), Query Frame = 1


Query: 1   MESKKVLSPVSRDFNIDDYIGMESCVDLKNHHKSTAEISPTKRLMQIGNKKMKDEKEYPP 60
           MESKKVLSPVSRDFNIDDYIGMESCVDLK+HHKSTAEIS TKRLMQIGNKKMKDEKEYPP
Sbjct: 1   MESKKVLSPVSRDFNIDDYIGMESCVDLKDHHKSTAEISSTKRLMQIGNKKMKDEKEYPP 60

Query: 61  PIPLLVVMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVAEERQRDAGGF 120
           PIPLLVVMKR YTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEV EER+RDAGGF
Sbjct: 61  PIPLLVVMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVGEERRRDAGGF 120

Query: 121 ILGVAV 127
           +LGVAV
Sbjct: 121 VLGVAV 126

[Close]

BLAST of MELO3C022816 vs. TrEMBL
Match: A0A0B2PAH8_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_040015 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.2e-16
Identity = 53/119 (44.54%), Postives = 69/119 (57.98%), Query Frame = 1


Query: 6   VLSPVSRDFNIDDYIGMESCVDLKN------HHKSTAEISPTKRLMQIGNKKMKDEKEYP 65
           V+S ++   N DDYIG ESC DL+N      +H+S        +     N KMK+ K +P
Sbjct: 2   VMSSITFPPNSDDYIGTESCTDLQNIDHVIDNHQSFKSNDAGNKTKVKNNIKMKENKVFP 61

Query: 66  PPIPLLV-----------VMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAV 108
           PPIPLL            V+KR+YT +GRLIL EEK+KH  + RA  ++GRL LQLV V
Sbjct: 62  PPIPLLARTQNLASHMPWVLKRYYTNEGRLILKEEKVKHHEYFRAHSANGRLTLQLVNV 120

[Close]

BLAST of MELO3C022816 vs. TrEMBL
Match: I1MAQ1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G168100 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.2e-16
Identity = 53/119 (44.54%), Postives = 69/119 (57.98%), Query Frame = 1


Query: 6   VLSPVSRDFNIDDYIGMESCVDLKN------HHKSTAEISPTKRLMQIGNKKMKDEKEYP 65
           V+S ++   N DDYIG ESC DL+N      +H+S        +     N KMK+ K +P
Sbjct: 2   VMSSITFPPNSDDYIGTESCTDLQNIDHVIDNHQSFKSNDAGNKTKVKNNIKMKENKVFP 61

Query: 66  PPIPLLV-----------VMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAV 108
           PPIPLL            V+KR+YT +GRLIL EEK+KH  + RA  ++GRL LQLV V
Sbjct: 62  PPIPLLARTQNLASHMPWVLKRYYTNEGRLILKEEKVKHHEYFRAHSANGRLTLQLVNV 120

[Close]

BLAST of MELO3C022816 vs. TrEMBL
Match: B9RJE9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1033430 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.1e-15
Identity = 51/117 (43.59%), Postives = 67/117 (57.26%), Query Frame = 1


Query: 16  IDDYIGMESCVDLKNHHKSTAEISPTKRLMQ-------------IGNKKMKDEKEYPPPI 75
           I DYIG+ESC+DLK+        S  K   Q                K+ K++KE+PPPI
Sbjct: 40  IGDYIGIESCLDLKDDDDMFISASEEKEGDQSFSVRLSRRDERWAAKKEKKEKKEFPPPI 99

Query: 76  PLLV-----------VMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVE 109
           PLL            V+KR+YT DGRLIL EE+++H G+ RAQR +GRL LQLV ++
Sbjct: 100 PLLARTENLPCHMPWVLKRYYTSDGRLILKEERVRHHGYFRAQRCNGRLTLQLVPLD 156

[Close]

BLAST of MELO3C022816 vs. TrEMBL
Match: B9H769_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16480g PE=4 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 4.6e-15
Identity = 55/121 (45.45%), Postives = 72/121 (59.50%), Query Frame = 1


Query: 6   VLSPVSRDFNIDDYIGMESCVDLKNHHKSTAEISPTKRLMQIG--NKKMKDE-----KEY 65
           V SP S   N  +YIGMESC+DLKN+    A  SP K     G  N++ +D+     KE+
Sbjct: 50  VSSPSSSTLN--EYIGMESCLDLKNNEDIFAS-SPKKEETNYGSCNREKRDQRWAKKKEF 109

Query: 66  PPPIPLLV-----------VMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAV 109
           PPPIPLL            V+KR+YT DGRLIL +EK++H  + RA R +GRL L LV +
Sbjct: 110 PPPIPLLARTENLPSHMPWVLKRYYTSDGRLILRKEKVRHHEYFRAHRCNGRLTLHLVPL 167

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BLAST of MELO3C022816 vs. TAIR10
Match: AT1G22110.1 (AT1G22110.1 structural constituent of ribosome)

HSP 1 Score: 76.3 bits (186), Expect = 1.6e-14
Identity = 44/115 (38.26%), Postives = 61/115 (53.04%), Query Frame = 1


Query: 16  IDDYIGMESCVDLKNHHKSTAEIS----PTKRLMQIGNKKMKDE-------KEYPPPIPL 75
           + DYIG ESC D+ +  +    +S    P K   + G ++ ++        +E+PPPIPL
Sbjct: 49  VGDYIGTESCFDILSADEGNDVVSVASEPVKSRFRYGGRRREEREARAAAAREFPPPIPL 108

Query: 76  LV-----------VMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVE 109
           L            V+KR  T DGRLIL EEK++H  + RA RS+GRL L LV ++
Sbjct: 109 LAQTGNLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTLHLVPLD 163

[Close]

BLAST of MELO3C022816 vs. TAIR10
Match: AT1G77932.1 (AT1G77932.1 Protein of unknown function (DUF3049))

HSP 1 Score: 66.2 bits (160), Expect = 1.6e-11
Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 1


Query: 19  YIGMESCVDLKNHHKSTAEISPTKRLMQIGNKKMKDEKEYPPPIPLLV--VMKRHYTGDG 78
           YIG ESC +  +      ++ P +R  +   K +  E   PP +P  V  V+KR YT DG
Sbjct: 10  YIGKESCFNAFSDKTGDVKL-PCERREE--KKTVAREIMSPPMLPSHVPSVLKREYTSDG 69

Query: 79  RLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVAEERQRD 117
           RL+L EEK+    + RA RS+GRLM+QLV+++  ++R  D
Sbjct: 70  RLLLKEEKVCRNEYFRAHRSNGRLMIQLVSLDEDDDRDSD 106

[Close]

BLAST of MELO3C022816 vs. TAIR10
Match: AT5G22390.1 (AT5G22390.1 Protein of unknown function (DUF3049))

HSP 1 Score: 51.2 bits (121), Expect = 5.4e-07
Identity = 30/70 (42.86%), Postives = 39/70 (55.71%), Query Frame = 1


Query: 51  KMKDEKEYPPPIPLLVVMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVE-- 110
           + K+ KEYPP +  +    + Y  +GRL+L E +I  R FLRA R DGRL L+LV  E  
Sbjct: 128 RRKERKEYPPAMTRMSF--KTYRKEGRLVLEEVRIPRREFLRASREDGRLRLKLVQPEDD 187

Query: 111 --VAEERQRD 117
               EE ++D
Sbjct: 188 HDEEEENEKD 195

[Close]

BLAST of MELO3C022816 vs. NCBI nr
Match: gi|659121098|ref|XP_008460498.1| (PREDICTED: uncharacterized protein LOC103499298 [Cucumis melo])

HSP 1 Score: 252.7 bits (644), Expect = 3.5e-64
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1


Query: 1   MESKKVLSPVSRDFNIDDYIGMESCVDLKNHHKSTAEISPTKRLMQIGNKKMKDEKEYPP 60
           MESKKVLSPVSRDFNIDDYIGMESCVDLKNHHKSTAEISPTKRLMQIGNKKMKDEKEYPP
Sbjct: 1   MESKKVLSPVSRDFNIDDYIGMESCVDLKNHHKSTAEISPTKRLMQIGNKKMKDEKEYPP 60

Query: 61  PIPLLVVMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVAEERQRDAGGF 120
           PIPLLVVMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVAEERQRDAGGF
Sbjct: 61  PIPLLVVMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVAEERQRDAGGF 120

Query: 121 ILGVAV 127
           ILGVAV
Sbjct: 121 ILGVAV 126

[Close]

BLAST of MELO3C022816 vs. NCBI nr
Match: gi|778708490|ref|XP_011656213.1| (PREDICTED: uncharacterized protein LOC105435672 [Cucumis sativus])

HSP 1 Score: 241.1 bits (614), Expect = 1.0e-60
Identity = 120/126 (95.24%), Postives = 123/126 (97.62%), Query Frame = 1


Query: 1   MESKKVLSPVSRDFNIDDYIGMESCVDLKNHHKSTAEISPTKRLMQIGNKKMKDEKEYPP 60
           MESKKVLSPVSRDFNIDDYIGMESCVDLK+HHKSTAEIS TKRLMQIGNKKMKDEKEYPP
Sbjct: 1   MESKKVLSPVSRDFNIDDYIGMESCVDLKDHHKSTAEISSTKRLMQIGNKKMKDEKEYPP 60

Query: 61  PIPLLVVMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVAEERQRDAGGF 120
           PIPLLVVMKR YTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEV EER+RDAGGF
Sbjct: 61  PIPLLVVMKRQYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVEVGEERRRDAGGF 120

Query: 121 ILGVAV 127
           +LGVAV
Sbjct: 121 VLGVAV 126

[Close]

BLAST of MELO3C022816 vs. NCBI nr
Match: gi|571510729|ref|XP_006596322.1| (PREDICTED: uncharacterized protein LOC102664674 [Glycine max])

HSP 1 Score: 92.4 bits (228), Expect = 6.0e-16
Identity = 53/119 (44.54%), Postives = 69/119 (57.98%), Query Frame = 1


Query: 6   VLSPVSRDFNIDDYIGMESCVDLKN------HHKSTAEISPTKRLMQIGNKKMKDEKEYP 65
           V+S ++   N DDYIG ESC DL+N      +H+S        +     N KMK+ K +P
Sbjct: 2   VMSSITFPPNSDDYIGTESCTDLQNIDHVIDNHQSFKSNDAGNKTKVKNNIKMKENKVFP 61

Query: 66  PPIPLLV-----------VMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAV 108
           PPIPLL            V+KR+YT +GRLIL EEK+KH  + RA  ++GRL LQLV V
Sbjct: 62  PPIPLLARTQNLASHMPWVLKRYYTNEGRLILKEEKVKHHEYFRAHSANGRLTLQLVNV 120

[Close]

BLAST of MELO3C022816 vs. NCBI nr
Match: gi|1009140389|ref|XP_015887625.1| (PREDICTED: uncharacterized protein LOC107422664 [Ziziphus jujuba])

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-15
Identity = 52/123 (42.28%), Postives = 68/123 (55.28%), Query Frame = 1


Query: 10  VSRDFNIDDYIGMESCVD-------------LKNHHKSTAEISPTKRLMQIGNKKMKDEK 69
           +S  FNI DYIG ESCVD             + +HH      +      +   ++   ++
Sbjct: 53  LSSSFNIGDYIGAESCVDVLKDDDQDQRPLDINDHHHDDLIRNRQPLSCKRDQRQSLKKR 112

Query: 70  EYPPPIPLLV-----------VMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLV 109
           E+PPPIPLL            V+KRHYT DGRLILTEEK+KH  + RA RS+GRL LQLV
Sbjct: 113 EFPPPIPLLARTENLHCHMPWVLKRHYTSDGRLILTEEKVKHHEYFRAHRSNGRLTLQLV 172

[Close]

BLAST of MELO3C022816 vs. NCBI nr
Match: gi|223546954|gb|EEF48451.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 90.1 bits (222), Expect = 3.0e-15
Identity = 51/117 (43.59%), Postives = 67/117 (57.26%), Query Frame = 1


Query: 16  IDDYIGMESCVDLKNHHKSTAEISPTKRLMQ-------------IGNKKMKDEKEYPPPI 75
           I DYIG+ESC+DLK+        S  K   Q                K+ K++KE+PPPI
Sbjct: 40  IGDYIGIESCLDLKDDDDMFISASEEKEGDQSFSVRLSRRDERWAAKKEKKEKKEFPPPI 99

Query: 76  PLLV-----------VMKRHYTGDGRLILTEEKIKHRGFLRAQRSDGRLMLQLVAVE 109
           PLL            V+KR+YT DGRLIL EE+++H G+ RAQR +GRL LQLV ++
Sbjct: 100 PLLARTENLPCHMPWVLKRYYTSDGRLILKEERVRHHGYFRAQRCNGRLTLQLVPLD 156

The following BLAST results are available for this feature:

BLAST of MELO3C022816 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN42_CUCSA	7.3e-61	95.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G409630 PE=4 SV=1	[more]
A0A0B2PAH8_GLYSO	4.2e-16	44.54	Uncharacterized protein OS=Glycine soja GN=glysoja_040015 PE=4 SV=1	[more]
I1MAQ1_SOYBN	4.2e-16	44.54	Uncharacterized protein OS=Glycine max GN=GLYMA_14G168100 PE=4 SV=1	[more]
B9RJE9_RICCO	2.1e-15	43.59	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1033430 PE=4 SV=1	[more]
B9H769_POPTR	4.6e-15	45.45	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16480g PE=4 SV=2	[more]

BLAST of MELO3C022816 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22110.1	1.6e-14	38.26	structural constituent of ribosome	[more]
AT1G77932.1	1.6e-11	40.00	Protein of unknown function (DUF3049)	[more]
AT5G22390.1	5.4e-07	42.86	Protein of unknown function (DUF3049)	[more]

BLAST of MELO3C022816 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121098\|ref\|XP_008460498.1\|	3.5e-64	100.00	PREDICTED: uncharacterized protein LOC103499298 [Cucumis melo]	[more]
gi\|778708490\|ref\|XP_011656213.1\|	1.0e-60	95.24	PREDICTED: uncharacterized protein LOC105435672 [Cucumis sativus]	[more]
gi\|571510729\|ref\|XP_006596322.1\|	6.0e-16	44.54	PREDICTED: uncharacterized protein LOC102664674 [Glycine max]	[more]
gi\|1009140389\|ref\|XP_015887625.1\|	1.0e-15	42.28	PREDICTED: uncharacterized protein LOC107422664 [Ziziphus jujuba]	[more]
gi\|223546954\|gb\|EEF48451.1\|	3.0e-15	43.59	conserved hypothetical protein [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021410	FAF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C022816T1	MELO3C022816T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 57..104 score: 1.6
None	No IPR available	PANTHER	PTHR33155	FAMILY NOT NAMED	coord: 16..108 score: 5.3
None	No IPR available	PANTHER	PTHR33155:SF12	F2E2.18	coord: 16..108 score: 5.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C022816	Csa5G409630	Cucumber (Chinese Long) v2	cumeB347
MELO3C022816	Cla019784	Watermelon (97103) v1	mewmB013
MELO3C022816	ClCG03G008910	Watermelon (Charleston Gray)	mewcgB023
MELO3C022816	Cla97C03G060100	Watermelon (97103) v2	mewmbB020
MELO3C022816	Bhi12G001095	Wax gourd	mewgoB015
MELO3C022816	CSPI05G14690	Wild cucumber (PI 183967)	cpimeB343
MELO3C022816	Cucsa.034610	Cucumber (Gy14) v1	cgymeB007
MELO3C022816	CmaCh15G007290	Cucurbita maxima (Rimu)	cmameB252
MELO3C022816	CmoCh04G024150	Cucurbita moschata (Rifu)	cmomeB626
MELO3C022816	Lsi09G009530	Bottle gourd (USVL1VR-Ls)	lsimeB014
MELO3C022816	Cp4.1LG13g05060	Cucurbita pepo (Zucchini)	cpemeB158
MELO3C022816	Cp4.1LG01g20160	Cucurbita pepo (Zucchini)	cpemeB360
MELO3C022816	CsGy5G014610	Cucumber (Gy14) v2	cgybmeB294
MELO3C022816	Carg01479	Silver-seed gourd	carmeB0822
MELO3C022816	Carg18252	Silver-seed gourd	carmeB0531
MELO3C022816	CsaV3_5G023810	Cucumber (Chinese Long) v3	cucmeB351

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C022816	Cucurbita maxima (Rimu)	cmameB636
MELO3C022816	Cucurbita moschata (Rifu)	cmomeB240