CmoCh04G024150 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G024150
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Structural constituent of ribosome, putative
Location	Cmo_Chr04 : 17963312 .. 17964974 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATAATAAATAAATAAGAAAAAAAAATTGATTTCAAAGTGATTGCTTCCTTGATAACCACCGGGGGAGAACGGTCGCCGTTTTATCTTCCATTCCAATTCCACCGCTGAGGGAGAGAGAGAGGGTGAAGAAGAGTGGAAGATCGAACGCTACTTCGTAGTTCTCGGAAGGTCGCCATTGCCGCCATTGATAACAGACCTCCATCCTCTCCCTTCTGTAAGTTTCTCCTTTCATTTTAACTTTGTTTTCTATTGTTAGAGTGATCGCTCTGGACTTGTATCGATTGATTCAAGAGTTGTATCTAATTCTTCTTCATCCCGTGATTAGTTCCTTTGACTTCGACTAACATAATCCAACAATCATCGTCAAGATTCGGTTTCTTTACAAAAAAAACGGAAAAATCCTTTCGTCTTCTCCATTCGCCGTTCTTCGTCTTTTTCAGCGATCAGTTTTTAATATAAACAATCGCCGACTTCAAATCCAATCTTATCCTTCGAACAAAACCAGGACCATTTGCTTCAACTTCCCCTTCTCCTCCTTCAATGGAGGATGAATTTCGGGATCCACATGGAAATTTATTACTTAATTAATGGTGTGTCTTGAAGCGTTATGAATGTGGCGACGGCTGAGTTGTGTTCTGTGTGCGACATTCAAGCAAATACGTGGTGCAATTTTGTCGCCCGCGTATGCTTCCAAATGTTGAAAAATTAGGTTCAAGAATCTTCAAATCCACTGTTCATTTCACTCGAATTTAAATCTTTTGAAGGGATCGGTTTCTGAATACAAAACGCAGAGCCCTTCTCTTTATTAAATGCAATACCTCTGTGTTAAACTCTGTTTATTGAACAACCAGTATGCAGAGCAAGAGCCTTTCTCCGGACTCCAGAGATTTCGACTTCGATGATTACATCGGAATAGAGAGCTGTGTTGATTTGATGGAGAATCACACGTCGTCGGACATCTCCGGGGAGAATTGTAGGAGAGATAACAAAATGTGGGGAATGGAGAGGAAAGATCACAACGAATATCCACCGCCGATTCAATTGCTGGTTCGAACTGAGAATCTGGCTTCCCAAATGCCATGGGTGTTGAAACGACACTACACCGACGACGGACGGCTGATTCTGACGGAGGAGAGATTGAGATACTACGAATTCTTCCGTGCCCACAGATCCAACGGCCGTCTGATGCTGCAGCTGGTGGCCTTCGACGACCAGGGCTACGATGAGTCGAACGTGGAAATAGGGGGTGAGGACGGCGGTGATGGAGAGGAATGTGCGGCGGCGGCGGAGGGCAGAGATGCAGAGATGCAGAGTCGTCTGTGTTCGGGGTGTCAGTGCCCGCAGGGAGCTTTGAGGACTGTACGAAGCTTAGGGAAAGACGTCAGTAACAGCAACAGCAACAGCTTATAGCGTGGAATCGCATTGTATGTGTGCACGTGTCATTTAATTTTTAGATGATATTATATGATTATGAAAAAATTAATTAGACTAATATTCAAATATTTGACCTTCCACCCTTCCTTGGTAGAAGTAATTCTTTTTTGTAAGGAACCCTTTTCGGTACTAAGAGTCGATTGATAACCCACAGCCGAAGGCATTCTACCCAGTAACGCGAATACTTCGGATCCCACTTAAACAAAACGAAAGATATTGTCATAAA

mRNA sequence

ATAATAATAAATAAATAAGAAAAAAAAATTGATTTCAAAGTGATTGCTTCCTTGATAACCACCGGGGGAGAACGGTCGCCGTTTTATCTTCCATTCCAATTCCACCGCTGAGGGAGAGAGAGAGGGTGAAGAAGAGTGGAAGATCGAACGCTACTTCGTAGTTCTCGGAAGGTCGCCATTGCCGCCATTGATAACAGACCTCCATCCTCTCCCTTCTATGCAGAGCAAGAGCCTTTCTCCGGACTCCAGAGATTTCGACTTCGATGATTACATCGGAATAGAGAGCTGTGTTGATTTGATGGAGAATCACACGTCGTCGGACATCTCCGGGGAGAATTGTAGGAGAGATAACAAAATGTGGGGAATGGAGAGGAAAGATCACAACGAATATCCACCGCCGATTCAATTGCTGGTTCGAACTGAGAATCTGGCTTCCCAAATGCCATGGGTGTTGAAACGACACTACACCGACGACGGACGGCTGATTCTGACGGAGGAGAGATTGAGATACTACGAATTCTTCCGTGCCCACAGATCCAACGGCCGTCTGATGCTGCAGCTGGTGGCCTTCGACGACCAGGGCTACGATGAGTCGAACGTGGAAATAGGGGGTGAGGACGGCGGTGATGGAGAGGAATGTGCGGCGGCGGCGGAGGGCAGAGATGCAGAGATGCAGAGTCGTCTGTGTTCGGGGTGTCAGTGCCCGCAGGGAGCTTTGAGGACTGTACGAAGCTTAGGGAAAGACGTCAGTAACAGCAACAGCAACAGCTTATAGCGTGGAATCGCATTGTATGTGTGCACGTGTCATTTAATTTTTAGATGATATTATATGATTATGAAAAAATTAATTAGACTAATATTCAAATATTTGACCTTCCACCCTTCCTTGGTAGAAGTAATTCTTTTTTGTAAGGAACCCTTTTCGGTACTAAGAGTCGATTGATAACCCACAGCCGAAGGCATTCTACCCAGTAACGCGAATACTTCGGATCCCACTTAAACAAAACGAAAGATATTGTCATAAA

Coding sequence (CDS)

ATGCAGAGCAAGAGCCTTTCTCCGGACTCCAGAGATTTCGACTTCGATGATTACATCGGAATAGAGAGCTGTGTTGATTTGATGGAGAATCACACGTCGTCGGACATCTCCGGGGAGAATTGTAGGAGAGATAACAAAATGTGGGGAATGGAGAGGAAAGATCACAACGAATATCCACCGCCGATTCAATTGCTGGTTCGAACTGAGAATCTGGCTTCCCAAATGCCATGGGTGTTGAAACGACACTACACCGACGACGGACGGCTGATTCTGACGGAGGAGAGATTGAGATACTACGAATTCTTCCGTGCCCACAGATCCAACGGCCGTCTGATGCTGCAGCTGGTGGCCTTCGACGACCAGGGCTACGATGAGTCGAACGTGGAAATAGGGGGTGAGGACGGCGGTGATGGAGAGGAATGTGCGGCGGCGGCGGAGGGCAGAGATGCAGAGATGCAGAGTCGTCTGTGTTCGGGGTGTCAGTGCCCGCAGGGAGCTTTGAGGACTGTACGAAGCTTAGGGAAAGACGTCAGTAACAGCAACAGCAACAGCTTATAG

Homology

[Close]

BLAST of CmoCh04G024150 vs. TrEMBL
Match: M5XST0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb019765mg PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.5e-26
Identity = 75/157 (47.77%), Postives = 87/157 (55.41%), Query Frame = 1


Query: 1   MQSKSLSPDSRDFDFDDYIGIESCVDLM-----------------ENHTSSDISGENCRR 60
           M S  LSP S      DYIG+ES VD+                  E   S +       R
Sbjct: 45  MLSDLLSPTSSSLLSGDYIGMESSVDVQKDCEKDQVVPNDDEEEEEEGQSGNFRQRLMGR 104

Query: 61  DNKMWGMERKDHNEYPPPIQLLVRTENLASQMPWVLKRHYTDDGRLILTEERLRYYEFFR 120
             + W M  K   E+PPPI LL RTENL S MPWVLKRHYT DGRLILTEE++R++E+FR
Sbjct: 105 REQKWAMRNK---EFPPPIPLLARTENLPSHMPWVLKRHYTSDGRLILTEEKVRHHEYFR 164

Query: 121 AHRSNGRLMLQLVAFDDQ------GYDESNVEIGGED 135
           AHRSNGRL LQLV  DD+        DE N +  G D
Sbjct: 165 AHRSNGRLTLQLVPLDDEVLISPVACDEGNKDGNGND 198

[Close]

BLAST of CmoCh04G024150 vs. TrEMBL
Match: A0A067KLR6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12001 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.2e-25
Identity = 70/153 (45.75%), Postives = 94/153 (61.44%), Query Frame = 1


Query: 17  DYIGIESCVDLMENHTSSDISGENCR----RDNKMWGMERKDHNEYPPPIQLLVRTENLA 76
           DYIG+ESC+DL +N      S +       R+ +   +++K   E+PPPI  L RT NL 
Sbjct: 42  DYIGVESCLDLEKNEDVFSSSSKKLETKILRNQRYCNIKKK---EFPPPIPSLARTGNLP 101

Query: 77  SQMPWVLKRHYTDDGRLILTEERLRYYEFFRAHRSNGRLMLQLVAFDDQGY-------DE 136
           S+MPWVL+R+YT+DGRLIL EER++++E+FRAHRSNGRL LQLV  DD+ Y       DE
Sbjct: 102 SRMPWVLRRYYTNDGRLILKEERVKHHEYFRAHRSNGRLTLQLVPLDDEVYPPLDYSDDE 161

Query: 137 SNVEIGGEDGGDGEECAAAAEGRDAEMQSRLCS 159
              E   E+ GD +E     +G + E     CS
Sbjct: 162 EEEEEEEEEEGDDDEKFEEIQGNENEPLENSCS 191

[Close]

BLAST of CmoCh04G024150 vs. TrEMBL
Match: B9GUJ3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s09260g PE=4 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 7.9e-24
Identity = 65/132 (49.24%), Postives = 81/132 (61.36%), Query Frame = 1


Query: 1   MQSKSLSPDSRDFDFDDYIGIESCVDLM-----------ENHTSSDISGENCRRDNKMWG 60
           M S   SP S      +YIGIESC+DL            +  T+ +   + C R+ +   
Sbjct: 3   MASNVSSPSSSTI-VGEYIGIESCLDLKNEEDIFTSSSNKEETNYESCSQRCHREKREQR 62

Query: 61  MERKDHNEYPPPIQLLVRTENLASQMPWVLKRHYTDDGRLILTEERLRYYEFFRAHRSNG 120
             +K   E+PPPI LL RTENL S MPWVLKR+YT DGRLIL EE++R +E+FRAHRSNG
Sbjct: 63  WAKK--KEFPPPIPLLARTENLPSHMPWVLKRYYTSDGRLILREEKVRRHEYFRAHRSNG 122

Query: 121 RLMLQLVAFDDQ 122
           RL L LV  DD+
Sbjct: 123 RLTLHLVPLDDE 131

[Close]

BLAST of CmoCh04G024150 vs. TrEMBL
Match: B9H769_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16480g PE=4 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 3.0e-23
Identity = 59/114 (51.75%), Postives = 79/114 (69.30%), Query Frame = 1


Query: 16  DDYIGIESCVDLMENHTSSDISGENCRRDNKMWGM---ERKDHN-----EYPPPIQLLVR 75
           ++YIG+ESC+DL  N    DI   + +++   +G    E++D       E+PPPI LL R
Sbjct: 59  NEYIGMESCLDLKNNE---DIFASSPKKEETNYGSCNREKRDQRWAKKKEFPPPIPLLAR 118

Query: 76  TENLASQMPWVLKRHYTDDGRLILTEERLRYYEFFRAHRSNGRLMLQLVAFDDQ 122
           TENL S MPWVLKR+YT DGRLIL +E++R++E+FRAHR NGRL L LV  DD+
Sbjct: 119 TENLPSHMPWVLKRYYTSDGRLILRKEKVRHHEYFRAHRCNGRLTLHLVPLDDE 169

[Close]

BLAST of CmoCh04G024150 vs. TrEMBL
Match: I1MAQ1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G168100 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.7e-23
Identity = 64/133 (48.12%), Postives = 88/133 (66.17%), Query Frame = 1


Query: 1   MQSKSLSPDSRDFDFDDYIGIESCVDL------MENHTS--SDISGENCRRDNKMWGMER 60
           M S +  P+S     DDYIG ESC DL      ++NH S  S+ +G   +  N +   + 
Sbjct: 3   MSSITFPPNS-----DDYIGTESCTDLQNIDHVIDNHQSFKSNDAGNKTKVKNNI---KM 62

Query: 61  KDHNEYPPPIQLLVRTENLASQMPWVLKRHYTDDGRLILTEERLRYYEFFRAHRSNGRLM 120
           K++  +PPPI LL RT+NLAS MPWVLKR+YT++GRLIL EE+++++E+FRAH +NGRL 
Sbjct: 63  KENKVFPPPIPLLARTQNLASHMPWVLKRYYTNEGRLILKEEKVKHHEYFRAHSANGRLT 122

Query: 121 LQLVAFDDQGYDE 126
           LQLV      +DE
Sbjct: 123 LQLVNVPFDDHDE 127

[Close]

BLAST of CmoCh04G024150 vs. TAIR10
Match: AT1G22110.1 (AT1G22110.1 structural constituent of ribosome)

HSP 1 Score: 104.4 bits (259), Expect = 7.8e-23
Identity = 62/149 (41.61%), Postives = 84/149 (56.38%), Query Frame = 1


Query: 17  DYIGIESCVDLMENHTSSDI---SGENCRRDNKMWGMERKDHN-------EYPPPIQLLV 76
           DYIG ESC D++     +D+   + E  +   +  G  R++         E+PPPI LL 
Sbjct: 51  DYIGTESCFDILSADEGNDVVSVASEPVKSRFRYGGRRREEREARAAAAREFPPPIPLLA 110

Query: 77  RTENLASQMPWVLKRHYTDDGRLILTEERLRYYEFFRAHRSNGRLMLQLVAFDDQGYD-- 136
           +T NL   MPWVLKR  T DGRLIL EE++R++E+FRA+RSNGRL L LV  DD  +D  
Sbjct: 111 QTGNLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTLHLVPLDDDVFDLP 170

Query: 137 ESNVEIGGEDGGDGEECAAAAEGRDAEMQ 154
           +       +D  D +EC    E  D + Q
Sbjct: 171 QEPSHYQSDDEEDDDECDDEDECDDDDQQ 199

[Close]

BLAST of CmoCh04G024150 vs. TAIR10
Match: AT1G77932.1 (AT1G77932.1 Protein of unknown function (DUF3049))

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-13
Identity = 47/112 (41.96%), Postives = 64/112 (57.14%), Query Frame = 1


Query: 18  YIGIESCVDLMENHTSSDISGENCRRDNKMWGMERKDHNEYPPPIQLLVRTENLASQMPW 77
           YIG ESC +   + T  D+     RR+ K    +        PP+        L S +P 
Sbjct: 10  YIGKESCFNAFSDKTG-DVKLPCERREEK----KTVAREIMSPPM--------LPSHVPS 69

Query: 78  VLKRHYTDDGRLILTEERLRYYEFFRAHRSNGRLMLQLVAFDDQGYDESNVE 130
           VLKR YT DGRL+L EE++   E+FRAHRSNGRLM+QLV+ D+    +S+V+
Sbjct: 70  VLKREYTSDGRLLLKEEKVCRNEYFRAHRSNGRLMIQLVSLDEDDDRDSDVK 108

[Close]

BLAST of CmoCh04G024150 vs. TAIR10
Match: AT5G22390.1 (AT5G22390.1 Protein of unknown function (DUF3049))

HSP 1 Score: 50.1 bits (118), Expect = 1.7e-06
Identity = 37/121 (30.58%), Postives = 55/121 (45.45%), Query Frame = 1


Query: 19  IGIESCVDLMENHTSSDISGE----------NCRRDNKMWGMERKDHNEYPPPIQLLVRT 78
           +G ES   L +   + D  G+          N   D + W   RK+  EYPP +      
Sbjct: 86  LGSESYYGLEDEKVNGDGDGDDDEIEVKGKDNGSNDEEEWEPRRKERKEYPPAM------ 145

Query: 79  ENLASQMPWVLKRHYTDDGRLILTEERLRYYEFFRAHRSNGRLMLQLVAFDDQGYDESNV 130
               ++M +   + Y  +GRL+L E R+   EF RA R +GRL L+LV  +D   +E   
Sbjct: 146 ----TRMSF---KTYRKEGRLVLEEVRIPRREFLRASREDGRLRLKLVQPEDDHDEEEEN 193

[Close]

BLAST of CmoCh04G024150 vs. NCBI nr
Match: gi|645256504|ref|XP_008233982.1| (PREDICTED: uncharacterized protein LOC103332972 [Prunus mume])

HSP 1 Score: 127.9 bits (320), Expect = 1.9e-26
Identity = 76/156 (48.72%), Postives = 90/156 (57.69%), Query Frame = 1


Query: 1   MQSKSLSPDSRDFDFDDYIGIESCVDLMENHTSSDI-----------SGENCR-----RD 60
           M S  LSP S      DYIG+ES VD+ ++     +            G N R     R 
Sbjct: 45  MLSDLLSPTSSSLLSGDYIGMESSVDVQKDCEEDQVVQNDDEEEEEGQGGNFRQRLMGRR 104

Query: 61  NKMWGMERKDHNEYPPPIQLLVRTENLASQMPWVLKRHYTDDGRLILTEERLRYYEFFRA 120
            + W M  K   E+PPPI LL RTENL S MPWVLKRHYT DGRLILTEE++R++E+FRA
Sbjct: 105 EQKWAMRNK---EFPPPIPLLARTENLPSHMPWVLKRHYTSDGRLILTEEKVRHHEYFRA 164

Query: 121 HRSNGRLMLQLVAFDDQ------GYDESNVEIGGED 135
           HRSNGRL LQLV  DD+        DE N +  G D
Sbjct: 165 HRSNGRLTLQLVPLDDEVLIAPVACDEGNKDGNGND 197

[Close]

BLAST of CmoCh04G024150 vs. NCBI nr
Match: gi|694436911|ref|XP_009345536.1| (PREDICTED: uncharacterized protein LOC103937322 [Pyrus x bretschneideri])

HSP 1 Score: 126.3 bits (316), Expect = 5.4e-26
Identity = 70/136 (51.47%), Postives = 86/136 (63.24%), Query Frame = 1


Query: 3   SKSLSPDSRDFDFDDYIGIESCVDLMEN-----------------HTSSDISGENCRRDN 62
           S  LSP S      DYIG+ES VD++++                 H  S       RR+ 
Sbjct: 4   SDLLSPTSSSLLTGDYIGMESSVDVLKDCDDHKPQLKVTGSGGDGHDGSFGQRVRSRREQ 63

Query: 63  KMWGMERKDHNEYPPPIQLLVRTENLASQMPWVLKRHYTDDGRLILTEERLRYYEFFRAH 122
           K W ++ K   E+PPPIQLL RTENL S MPWVLKRHYTDDGRLILTEE+++++E+ RAH
Sbjct: 64  K-WALKNK---EFPPPIQLLARTENLPSHMPWVLKRHYTDDGRLILTEEKVKHHEYLRAH 123

[Close]

BLAST of CmoCh04G024150 vs. NCBI nr
Match: gi|657973458|ref|XP_008378528.1| (PREDICTED: uncharacterized protein LOC103441622 [Malus domestica])

HSP 1 Score: 126.3 bits (316), Expect = 5.4e-26
Identity = 70/136 (51.47%), Postives = 86/136 (63.24%), Query Frame = 1


Query: 3   SKSLSPDSRDFDFDDYIGIESCVDLMEN-----------------HTSSDISGENCRRDN 62
           S  LSP S      DYIG+ES VD++++                 H  S       RR+ 
Sbjct: 4   SDLLSPTSSSLLTGDYIGMESSVDVLKDCDDHKPRLKVTGSGGDGHDGSFGQRVRSRREQ 63

Query: 63  KMWGMERKDHNEYPPPIQLLVRTENLASQMPWVLKRHYTDDGRLILTEERLRYYEFFRAH 122
           K W ++ K   E+PPPIQLL RTENL S MPWVLKRHYTDDGRLILTEE+++++E+F AH
Sbjct: 64  K-WALKNK---EFPPPIQLLARTENLPSHMPWVLKRHYTDDGRLILTEEKVKHHEYFSAH 123

[Close]

BLAST of CmoCh04G024150 vs. NCBI nr
Match: gi|596297876|ref|XP_007227402.1| (hypothetical protein PRUPE_ppb019765mg [Prunus persica])

HSP 1 Score: 125.6 bits (314), Expect = 9.3e-26
Identity = 75/157 (47.77%), Postives = 87/157 (55.41%), Query Frame = 1


Query: 1   MQSKSLSPDSRDFDFDDYIGIESCVDLM-----------------ENHTSSDISGENCRR 60
           M S  LSP S      DYIG+ES VD+                  E   S +       R
Sbjct: 45  MLSDLLSPTSSSLLSGDYIGMESSVDVQKDCEKDQVVPNDDEEEEEEGQSGNFRQRLMGR 104

Query: 61  DNKMWGMERKDHNEYPPPIQLLVRTENLASQMPWVLKRHYTDDGRLILTEERLRYYEFFR 120
             + W M  K   E+PPPI LL RTENL S MPWVLKRHYT DGRLILTEE++R++E+FR
Sbjct: 105 REQKWAMRNK---EFPPPIPLLARTENLPSHMPWVLKRHYTSDGRLILTEEKVRHHEYFR 164

Query: 121 AHRSNGRLMLQLVAFDDQ------GYDESNVEIGGED 135
           AHRSNGRL LQLV  DD+        DE N +  G D
Sbjct: 165 AHRSNGRLTLQLVPLDDEVLISPVACDEGNKDGNGND 198

[Close]

BLAST of CmoCh04G024150 vs. NCBI nr
Match: gi|694440832|ref|XP_009347213.1| (PREDICTED: uncharacterized protein LOC103938889 [Pyrus x bretschneideri])

HSP 1 Score: 124.0 bits (310), Expect = 2.7e-25
Identity = 69/132 (52.27%), Postives = 85/132 (64.39%), Query Frame = 1


Query: 6   LSPDSRDFDFDDYIGIESCVDLM---ENHT------------SSDISGENCR-RDNKMWG 65
           LSP S      DYIG+ES  D++   E+H               D  GE  R R  + W 
Sbjct: 7   LSPTSSSLLCGDYIGMESSTDVLKDGEDHQLLPKVTGSGGDGHDDNFGERVRSRREQKWA 66

Query: 66  MERKDHNEYPPPIQLLVRTENLASQMPWVLKRHYTDDGRLILTEERLRYYEFFRAHRSNG 122
           ++ K   E+PPPI LL RTENL S+MPWVLKRH TDDGRLILTEE++R++E+FRAHRSNG
Sbjct: 67  LKNK---EFPPPIPLLARTENLPSRMPWVLKRHCTDDGRLILTEEKVRHHEYFRAHRSNG 126

The following BLAST results are available for this feature:

BLAST of CmoCh04G024150 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G024150 vs. TrEMBL


Match Name	E-value	Identity	Description
M5XST0_PRUPE	6.5e-26	47.77	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb019765mg PE=4 SV=1	[more]
A0A067KLR6_JATCU	3.2e-25	45.75	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12001 PE=4 SV=1	[more]
B9GUJ3_POPTR	7.9e-24	49.24	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s09260g PE=4 SV=2	[more]
B9H769_POPTR	3.0e-23	51.75	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16480g PE=4 SV=2	[more]
I1MAQ1_SOYBN	6.7e-23	48.12	Uncharacterized protein OS=Glycine max GN=GLYMA_14G168100 PE=4 SV=1	[more]

BLAST of CmoCh04G024150 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22110.1	7.8e-23	41.61	structural constituent of ribosome	[more]
AT1G77932.1	1.5e-13	41.96	Protein of unknown function (DUF3049)	[more]
AT5G22390.1	1.7e-06	30.58	Protein of unknown function (DUF3049)	[more]

BLAST of CmoCh04G024150 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|645256504\|ref\|XP_008233982.1\|	1.9e-26	48.72	PREDICTED: uncharacterized protein LOC103332972 [Prunus mume]	[more]
gi\|694436911\|ref\|XP_009345536.1\|	5.4e-26	51.47	PREDICTED: uncharacterized protein LOC103937322 [Pyrus x bretschneideri]	[more]
gi\|657973458\|ref\|XP_008378528.1\|	5.4e-26	51.47	PREDICTED: uncharacterized protein LOC103441622 [Malus domestica]	[more]
gi\|596297876\|ref\|XP_007227402.1\|	9.3e-26	47.77	hypothetical protein PRUPE_ppb019765mg [Prunus persica]	[more]
gi\|694440832\|ref\|XP_009347213.1\|	2.7e-25	52.27	PREDICTED: uncharacterized protein LOC103938889 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021410	FAF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G024150.1	CmoCh04G024150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 57..115 score: 4.9
None	No IPR available	PANTHER	PTHR33155	FAMILY NOT NAMED	coord: 17..153 score: 1.3
None	No IPR available	PANTHER	PTHR33155:SF12	F2E2.18	coord: 17..153 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G024150	Cucsa.034610	Cucumber (Gy14) v1	cgycmoB0019
CmoCh04G024150	CmaCh04G023120	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G024150	Csa5G409630	Cucumber (Chinese Long) v2	cmocuB740
CmoCh04G024150	MELO3C022816	Melon (DHL92) v3.5.1	cmomeB626
CmoCh04G024150	CSPI05G14690	Wild cucumber (PI 183967)	cmocpiB749
CmoCh04G024150	Lsi09G009530	Bottle gourd (USVL1VR-Ls)	cmolsiB610
CmoCh04G024150	Cp4.1LG01g20160	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G024150	MELO3C022816.2	Melon (DHL92) v3.6.1	cmomedB715
CmoCh04G024150	CsaV3_5G023810	Cucumber (Chinese Long) v3	cmocucB0876
CmoCh04G024150	Cla97C03G060100	Watermelon (97103) v2	cmowmbB719
CmoCh04G024150	Bhi12G001095	Wax gourd	cmowgoB0822
CmoCh04G024150	CsGy5G014610	Cucumber (Gy14) v2	cgybcmoB654

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G024150	Cucurbita maxima (Rimu)	cmacmoB309
CmoCh04G024150	Watermelon (Charleston Gray)	cmowcgB647
CmoCh04G024150	Watermelon (97103) v1	cmowmB667
CmoCh04G024150	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G024150	Silver-seed gourd	carcmoB0716
CmoCh04G024150	Silver-seed gourd	carcmoB1121
CmoCh04G024150	Cucurbita moschata (Rifu)	cmocmoB262