Lsi09G009130 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G009130
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Voltage-dependent L-type calcium channel subunit alpha-1F
Location	chr09 : 11168296 .. 11174395 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGGCGTACGACTCCGATGATCGGAATACCACCGTGCCGGTTGAAGAAGAAGAAGCAACCAGTCACCAATCGAAAGGAGTGCGTACTGAGGATCAGACTGTTTATGAACCTCTCCGCCGTCTGATCGCCGAGATTTTCTTTCCCGATGAAACTAAGGGTTCTTCTTTGTTTCAACGCGTCAAGGTCTCTGTCGCTGAGAATGGCCCTGCCGTTGGACAAGCTTGCAGAAAATTTGGTCGCGATGTTCTTTGTTGGACTCGCAGGGGCAGTCCTCTTCGAGCGCTCCTTGTTATCCCCGTGAGTATTACTGATAATTCCAAAATGATGGATGTCTGGACTTGGTTCATTGTGTTTGAGATGCTTTCGTTCAGTAATTAGTGGATTGTGTGCTACTATTCGAGATTATGATTTTATCGCTCGAATGTTACTTTCTCTGTTATTTTTTTGGTTTGTTTGAAGGTTCCGATTGATCTGGACGGGATTTGTTGCGAATAGGACTATGTTTGCTTAGTAATGAATACTGTTTCACAGTTCCCGACCTATGGCAAAAACTGCGGAGAGAGCTCGAGTGGTTGTGTTTTTGATGCTTGTAGAAAAGAATTTGTTGAAGTGCTTTCCTTCCTTTTGTTCTGATCCCTTTGCCAATAGTCTTACATTTTGTGCCCTATTTGTAGTTGAACCCAAAAAACCTTCTGCCTTTTCTCTTTATGTAAACTCATTTAAAGCCCACCATCTTTTGCTGTTTGGCTTCTAGTACCCGTTATCAAATGTTGTTCCTGTGGAGGGAGTTGATCCCTTCTTCCTTGGCCACCCTTTGCATTGGACAATGGACCTGTAAGACTGGAATGATACTTATGTAATTCATAAATTCCCAATTCTCTTGCGTTCCCATCCATTTTGGCTGAAAATCAATAATTTCCATGGTTGCAACTATTTGCGATAGCTTCAATGTTAATAGATGGGCAATCTTGAGAATACGTAGCCCATTTTTTCTATCTATTCTATAACCACGTAGAATTTCATTTTATTTTATTTATATCTATTATTTTTTTTTTAAGTTTTTAAGGCATTTTCACCTAGATTATGAAACTTTGTCCATCTGACGTTTGGAGTGAGATAGGTTCCTTTTTGGTTGAGAAATAGAGAATTCATTAACATCTTCAAATGTTAACTTTATTATTCCTAAACACGTGACAAATGTTCGGTCTAGAGCAAGATAGATACACTGCCCCACTATTCTTTGTTTTGAAGGACTTATACAATTACAAGCTCTAACTCCTCTTTCCTGGTTGCATTTGGTAAGTGTCGATTTTTGAGGGCATATAAATCATATTTGGAGGATTTTGACTTTATGAATTGAGTGGAGGTTCTTGGCTTTGTTCAAGTATGTGCTGTTCTTTAGACTTCTCTTTTGCTGTTTCGTCTTGAATAGACAACGGATTCTCTTTGATGTCCAGTTTCTTGAGTTTCATTATTCTGATTTTGTCATTATTGTAAGGACTATCAACTATGTGTGAACTGTAAACTTGGAGTGGTTTCTTTTCAGTTTGTTTTGGGGTCTGGTTCCTTTGCAGTACATAGCTCTTGGAAGTTTGACTTTCATAGTAGAGTTTGGTTCAGAGATGGTAACACCCATGGAAAAATAAACTTTTCTCGTCATGAGAGAATAATGGATTTATCCCTTTTGGTTTAGGGGCATAGCCTAGAAAGATATACTTATTAGCTCTAGGGTCTAGTTTTCTTCTTTTAGGAGAGTGATTATGGATAAAGGCAGTTTAATAAAAAATCTATGAAGGAATATAGGATAGTAACATGCAGGACTCTCAAACTCTATCTGTTTCTCACAATCAAGGATTTTCTTTCTGATGTGATTCTTGTAGTGCATTTCTACAAGAGTTATAGCTGAAGCCTATTGATAAGTTTTTGGTAACTATAGGTTGGCGTTAATCCTATGATATCTCTAATTCTGTTTATTTTTGGGCAGTTTGGATACAGAAGAGTTATAGGATCTTCATTGATACTTTTATGGTTGGAGAAGATGTGTGGGAGATTTTAAATTCCTGTATTCCGTATGGAGATCTCTCAAATTCTTTTGTGATTTTGACTCCCTTTTTTTATTGGTGCCAATTGTAAGAGATTGTATCTTTTTGATATTGTTATGGGTCGTTGATATCTCACCTCCCTCTCTTAGTTTTTCTGTTAATGAAAGATTTTCCATCTGAAAAAGGTATAAATTAGGAGCAATTGATAGGAATTGTTGCTACGAATGGGTAGAAAGGATGCTGGCTCTTGAGACTTGATTCAAGGAGGGTGTAACCATTGAGAATAACAGAAGTCATGGGTACCGGATAGTTTGATACTGATGAATGGTGCACACTGTGCCAATGGTCCTCTTAAGTCTTAACTGCTTTTATCTGTTTTGCATCTGTTGCAAGATTTTCACTGTAGTAGTCCTCTCTCTATCTTCCACACGCAAAGACAGACTGAAGTGCTTTTTTATGTTCTCGCCATCACCCTTTCAAGTTGTTACTAACGTTTGAAATTGCTGCAGGTTGGGACAATTGTTCTTCTTGCATTGACGGGATCGCTCATCTTTCTGCTATTCTTTCTGGCTGCTACTCTCAATGCCATCATTGTCTCTCTTCTTGTATCCTTGGCAGCAGTTGGAGGCTTCTTGGCTCTTTTCTTTGCTTGCTTAACAGCTATATACATTGGAGCTTTAGCAGTTGCTTTGTTTGCTATATCTACTGCAACGATCTCAGCAATTGTAGCAGTGGTGATCGCCGCAGGTACCAATAATATACACTTATCTAAACTATGTTTCTTGAAAACCTTTTAACCCATTGACATGAAACTGTACATATTGGTTTGACATGGTTGGGTCTCAGTCTCATAAGGAAAATTGAAAAACATGAAACATTGTTGGGGGAAACCTCCCACTTTTACCGTTGGAATAAACAGAAAATAATTGAGAATTAAAAGAACATAACAAAAGTAGGAAACACAAGAATTTTCGTGGAGAACTCTAAAGTCGGATAAAAACCACGGTCCACCATAAAGAAATCTACTATATAAAAAATTATTACATTCATCCCTATCCCAATTGCAAGAACTCTCTCTCAAAGTTTTTGTACTACTCACACACTTTTTTCCACTTTTTGACTAGAGAAGACAAAAAGGAAATTTGACTAAAGTTAGTACATCCAAGCTTAAAGTGTTTCTGATTGAGGCAATTTGAAACAAAGTTATAAGCTGCTCCTTTTATGGTGGTAGAAGCTTATCACTTCCTTGAATCATTTTGACGTAGGATCGCTACTCTTCCAATATTTTGCCAAAAACTCTACAACCATATAGTTTACGGCTTTCTAACTTTATGTTTCTACTTCTCCTTTCGTTGGGGTTATCCAGTGCTCTACCCCACCATTTGAATTGTTTCCTGAATCATTTGCGTGAATTTAACTTGTACGTAGCAATGATAATGTTGTAAGCTAAGAGTTTCTGTTTGAAGCGGAGGATCCAGAGAAGTTCTGCCTTCAATAAAAAAAAGGCCATATACTAGTCAATGATTTTCCACTGGTTGTGTTTTTCTTTGTGAGAGTACACCTTCCACTGTTGCTGGGGGTTGCCGTATCTTTCTTTGCTCTAACATCTTATTCAAAATTCAGGTTGGATTGGGTTCTTCTGTGTGGTTTGGCTAGCAGCACGAAAAAGTTTTCGTCTTGCAAAGCGGTCGATGAGCGCAAGCAATTCAGCAATTTCAGCATTTTCTTATGCTAGGCGTGCCCACAAAGACTAGGTAATGTTTCATATACTTTAAATGAATGCTATGAATTGGGATATGTTATTGCTTCACACTTTTCCCCCTCCTGAGGGTCACTTTTGGAAGATCTGCTGCATATGTTGTATTGAGTTTTCTAAGGCCTTGGTAGTGTATCCATAATGTGTAATCTCATAATGTAAATATTCTTTTAAAAGTATTATACTTTATGGGTTTCTTTATTGGCGATTAAAGTACCAAGGATTGAAGATAGCGCTTCAAAGAAATATTATCATAATTTAAGTAAAATTTTCAATTTCTACTATGTAAAGTAAATGACGCCGTATTTATGAAGTTTGAGGTTGGAAATTATGAATTTATGGTTGGATTGTGCAAAGTAATGGATTCTATAAATCCAAACCAAGTATCTAATTTGTAAGAGGTTAACATGGGCAAGATGTTTGTCTTATAAGTATAATTTGTGTAGTTAGGACTCAAGTCTGTTTGGATTGATTGTCTAAGTGTTTATGCACATTTTTTTTGTCAATCCAAATGCACCTTTAATTACATTATGGATTAATGAATTCAGGGTAAGATAAAGGAAATTCACATAGCAAATACATGTTTGACTTCTAAATGCTCTAAGATGAGCAAATATTCATGAAAAACACATATTTGACTTGTATACAGGCCAGCCAAATGCCTTTTTGAAAGGAGCTCATACCTGCCTATGAACTATTTCCATTTATAAAATACTCATACTTCGTGTTGGTTTGGATTAATTTAAAAAACATTGTTTTTCAAAAATTCATTTTTCATTTAAACACTTTTGATAAGAAGTGATTAAATTAAAAACATTAATAGCTTTTAAAATTTATTTTGAGTGATTATCAAATATTTGTATTTTTTTAAATTAAATATTTGAAAAGGTATTCCGAACATACCTTTCATCTTACTGCTCTGTTGGTTGAGTTATGTGAATACGTGTTTAAAGTAAAATAGGATCATAATCTAAAGAAAATATGAACTTGGATACAATGGGAAAGGAAAAAGGGGAGACTTTTAAAATATAGCTCAAATCTAATAATTTGTTTTTGGTAGATATTAATTGATTTTTTACTTCAAAGTTTATTGTTACCATTCCTCTCTTTTTTGAACCATACTGAAATTGTACGAGTCGTTTAGTATGCCATAAATGACTTATGAATATAATTTAATTTTTTACTTCAAAGTTTATTGTTACCATCCATCTCCTTTTCGAACCATACTAAAATTGTACGAGTCTTTTAGTATGCCATAAATGACCTATAAATATAATTTGATTTTTTACTTCAAAGTTTATTGTTACCATCCATCTCTTTTTTGAACCATACTGAAATTGTACGAGTCTTTTAGTATGCCATAAATGACCTATGAATATAATTTGATTTTTCACTTCAAAGTTTATTATCATCGTGCATCTCTTTTGGAACTATACTAAAATTGTACGAGTCTTTTAGTATGTCATAAATGACCTACTATGGGAATTTGAAAAAGGAAAAACTATTTGGATACAATGCCAAACGCTCAAGATTTGTAGGTATAAGCTCGAGTAAATTTGTAGTCTCTTTAATGACTTACTAAAAATATCAATGAGCAAAAAGGTAAAATGGGGTAATGTGGTGATGCTTTTATTAGGCTAATATAGTTGGGTAAGATTAGTTAAAGTATTGATATAATTAAATTATCATAACTTATTTGCGGTGGCGGATCCAGAACTTTAAGGTCAGGGGCACAAATGTACATATAAAGTTAAAAGTTTAGCCTATAAACTTCTAGAATTTTGTTTATATATAGTCAATTCTTCACTTTTGTGTTTAATAGATTTCTAAATGGGCTGTTTTCAAATATAGAAAAATAAGTCAAACTATTTATAAATATAGAAAAATTTAACTGTCGCGATAGAATTCTATCACTTGAGCGATCGCGATAGATAGTGAAATTTTTCTATATTTGTAAATAGTTTGATATTTTTTCTATTTATAGTAATTTTTCATTCTAAATTGTCAATTATGCATTTAGTAGGTCTTTTACTATGTTAAAAATTAAATGTTGTATTAGACATTAAATTTAACTTTTTGCTTAATAGGCACAGGTTAAACATCTTTTCAAAATTAATTTATCTATTAACTACCGATTTGGTTGGTGATTCTTACTTGCCTTATTTGATTTGAATCACTTGGAAGGGGGCGGGATGCCTTGGAGGCACCATAGATTGCACCGTTGGCAACAGCGTTTTTGAGTGCCCCTAAACTTGAGGGGGCCGTAGATCGAGTTCTGGGCTAAGTATGATCGGAG

mRNA sequence

ATGGCGGAGGCGTACGACTCCGATGATCGGAATACCACCGTGCCGGTTGAAGAAGAAGAAGCAACCAGTCACCAATCGAAAGGAGTGCGTACTGAGGATCAGACTGTTTATGAACCTCTCCGCCGTCTGATCGCCGAGATTTTCTTTCCCGATGAAACTAAGGGTTCTTCTTTGTTTCAACGCGTCAAGGTCTCTGTCGCTGAGAATGGCCCTGCCGTTGGACAAGCTTGCAGAAAATTTGGTCGCGATGTTCTTTGTTGGACTCGCAGGGGCAGTCCTCTTCGAGCGCTCCTTGTTATCCCCGTGAGTATTACTGATAATTCCAAAATGATGGATTACCCGTTATCAAATGTTGTTCCTGTGGAGGGAGTTGATCCCTTCTTCCTTGGCCACCCTTTGCATTGGACAATGGACCTACTTCTCTTTTGCTGTTTCGTCTTGAATAGACAACGGATTCTCTTTGATGTCCAGTTTCTTGAGTTTCATTATTCTGATTTTGTCATTATTTACATAGCTCTTGGAAGTTTGACTTTCATAGTAGAGTTTGGTTCAGAGATGGTTGGGACAATTGTTCTTCTTGCATTGACGGGATCGCTCATCTTTCTGCTATTCTTTCTGGCTGCTACTCTCAATGCCATCATTGTCTCTCTTCTTGTATCCTTGGCAGCAGTTGGAGGCTTCTTGGCTCTTTTCTTTGCTTGCTTAACAGCTATATACATTGGAGCTTTAGCAGTTGCTTTGTTTGCTATATCTACTGCAACGATCTCAGCAATTGTAGCAGTGGTGATCGCCGCAGGTTGGATTGGGTTCTTCTGTGTGGTTTGGCTAGCAGCACGAAAAAGTTTTCGTCTTGCAAAGCGGTCGATGAGCGCAAGCAATTCAGCAATTTCAGCATTTTCTTATGCTAGGCGTGCCCACAAAGACTAGGGGGCGGGATGCCTTGGAGGCACCATAGATTGCACCGTTGGCAACAGCGTTTTTGAGTGCCCCTAAACTTGAGGGGGCCGTAGATCGAGTTCTGGGCTAAGTATGATCGGAG

Coding sequence (CDS)

ATGGCGGAGGCGTACGACTCCGATGATCGGAATACCACCGTGCCGGTTGAAGAAGAAGAAGCAACCAGTCACCAATCGAAAGGAGTGCGTACTGAGGATCAGACTGTTTATGAACCTCTCCGCCGTCTGATCGCCGAGATTTTCTTTCCCGATGAAACTAAGGGTTCTTCTTTGTTTCAACGCGTCAAGGTCTCTGTCGCTGAGAATGGCCCTGCCGTTGGACAAGCTTGCAGAAAATTTGGTCGCGATGTTCTTTGTTGGACTCGCAGGGGCAGTCCTCTTCGAGCGCTCCTTGTTATCCCCGTGAGTATTACTGATAATTCCAAAATGATGGATTACCCGTTATCAAATGTTGTTCCTGTGGAGGGAGTTGATCCCTTCTTCCTTGGCCACCCTTTGCATTGGACAATGGACCTACTTCTCTTTTGCTGTTTCGTCTTGAATAGACAACGGATTCTCTTTGATGTCCAGTTTCTTGAGTTTCATTATTCTGATTTTGTCATTATTTACATAGCTCTTGGAAGTTTGACTTTCATAGTAGAGTTTGGTTCAGAGATGGTTGGGACAATTGTTCTTCTTGCATTGACGGGATCGCTCATCTTTCTGCTATTCTTTCTGGCTGCTACTCTCAATGCCATCATTGTCTCTCTTCTTGTATCCTTGGCAGCAGTTGGAGGCTTCTTGGCTCTTTTCTTTGCTTGCTTAACAGCTATATACATTGGAGCTTTAGCAGTTGCTTTGTTTGCTATATCTACTGCAACGATCTCAGCAATTGTAGCAGTGGTGATCGCCGCAGGTTGGATTGGGTTCTTCTGTGTGGTTTGGCTAGCAGCACGAAAAAGTTTTCGTCTTGCAAAGCGGTCGATGAGCGCAAGCAATTCAGCAATTTCAGCATTTTCTTATGCTAGGCGTGCCCACAAAGACTAG

Protein sequence

MAEAYDSDDRNTTVPVEEEEATSHQSKGVRTEDQTVYEPLRRLIAEIFFPDETKGSSLFQRVKVSVAENGPAVGQACRKFGRDVLCWTRRGSPLRALLVIPVSITDNSKMMDYPLSNVVPVEGVDPFFLGHPLHWTMDLLLFCCFVLNRQRILFDVQFLEFHYSDFVIIYIALGSLTFIVEFGSEMVGTIVLLALTGSLIFLLFFLAATLNAIIVSLLVSLAAVGGFLALFFACLTAIYIGALAVALFAISTATISAIVAVVIAAGWIGFFCVVWLAARKSFRLAKRSMSASNSAISAFSYARRAHKD

Homology

[Close]

BLAST of Lsi09G009130 vs. TrEMBL
Match: A0A0A0KNC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G427940 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.5e-43
Identity = 111/122 (90.98%), Postives = 117/122 (95.90%), Query Frame = 1


Query: 187 VGTIVLLALTGSLIFLLFFLAATLNAIIVSLLVSLAAVGGFLALFFACLTAIYIGALAVA 246
           VGTIVLLA+TGSLIFL FFLAATLNAII+SLLVSLAAVGGFLALFFAC+TAIY+GAL VA
Sbjct: 101 VGTIVLLAMTGSLIFLFFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVA 160

Query: 247 LFAISTATISAIVAVVIAAGWIGFFCVVWLAARKSFRLAKRSMSASNSAISAFSYARRAH 306
           LF ISTATISAIVAVVIAAGWIGFFC+VWLA RKSF LAKRS+SASNSAISAFSYARRAH
Sbjct: 161 LFVISTATISAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAH 220

Query: 307 KD 309
           KD
Sbjct: 221 KD 222

[Close]

BLAST of Lsi09G009130 vs. TrEMBL
Match: M5WTH6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009705mg PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.2e-32
Identity = 88/121 (72.73%), Postives = 104/121 (85.95%), Query Frame = 1


Query: 187 VGTIVLLALTGSLIFLLFFLAATLNAIIVSLLVSLAAVGGFLALFFACLTAIYIGALAVA 246
           VGTI L++LTG L+F+LFFLAATLNA+I+SLL+SLAA GGFLALFFAC+TAIYIGAL+VA
Sbjct: 157 VGTITLISLTGLLVFMLFFLAATLNAVIISLLLSLAAAGGFLALFFACVTAIYIGALSVA 216

Query: 247 LFAISTATISAIVAVVIAAGWIGFFCVVWLAARKSFRLAKRSMSASNSAISAFSYARRAH 306
           +F IS  TISAI AV+I  GWIGFF +VWLAA+KS  LAK+S S + SAISA+SY R AH
Sbjct: 217 VFVISATTISAIAAVLITTGWIGFFWIVWLAAKKSLGLAKQSFSVTGSAISAYSYGRHAH 276

Query: 307 K 308
           K
Sbjct: 277 K 277

[Close]

BLAST of Lsi09G009130 vs. TrEMBL
Match: A0A067D331_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032604mg PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 7.7e-32
Identity = 88/120 (73.33%), Postives = 102/120 (85.00%), Query Frame = 1


Query: 187 VGTIVLLALTGSLIFLLFFLAATLNAIIVSLLVSLAAVGGFLALFFACLTAIYIGALAVA 246
           VGTI LL LTG L+F+LFFLAAT+NAII+SLLVSLAA GGFLALFFACLTAIYIGAL+VA
Sbjct: 8   VGTITLLTLTGLLVFMLFFLAATINAIIISLLVSLAAAGGFLALFFACLTAIYIGALSVA 67

Query: 247 LFAISTATISAIVAVVIAAGWIGFFCVVWLAARKSFRLAKRSMSASNSAISAFSYARRAH 306
            F IS AT+SAIVAV+IA+GWIGFFCV+WLA +KS  LAK  +  + SA+S +S AR AH
Sbjct: 68  AFVISAATVSAIVAVLIASGWIGFFCVIWLATKKSVGLAKHFLGMTGSALSTYSRARVAH 127

[Close]

BLAST of Lsi09G009130 vs. TrEMBL
Match: V4SA05_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029179mg PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 7.7e-32
Identity = 88/120 (73.33%), Postives = 102/120 (85.00%), Query Frame = 1


Query: 187 VGTIVLLALTGSLIFLLFFLAATLNAIIVSLLVSLAAVGGFLALFFACLTAIYIGALAVA 246
           VGTI LL LTG L+F+LFFLAAT+NAII+SLLVSLAA GGFLALFFACLTAIYIGAL+VA
Sbjct: 111 VGTITLLTLTGLLVFMLFFLAATINAIIISLLVSLAAAGGFLALFFACLTAIYIGALSVA 170

Query: 247 LFAISTATISAIVAVVIAAGWIGFFCVVWLAARKSFRLAKRSMSASNSAISAFSYARRAH 306
            F IS AT+SAIVAV+IA+GWIGFFCV+WLA +KS  LAK  +  + SA+S +S AR AH
Sbjct: 171 AFVISAATVSAIVAVLIASGWIGFFCVIWLATKKSVGLAKHFLGMTGSALSTYSRARVAH 230

[Close]

BLAST of Lsi09G009130 vs. TrEMBL
Match: A0A067E1J1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032586mg PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.9e-31
Identity = 88/120 (73.33%), Postives = 103/120 (85.83%), Query Frame = 1


Query: 187 VGTIVLLALTGSLIFLLFFLAATLNAIIVSLLVSLAAVGGFLALFFACLTAIYIGALAVA 246
           VGTI LL LTG L+F+LFFLAAT+NAII+SLLVSLAA GGFLALFFACLTAIYIGAL+VA
Sbjct: 8   VGTITLLTLTGLLVFMLFFLAATINAIIISLLVSLAAAGGFLALFFACLTAIYIGALSVA 67

Query: 247 LFAISTATISAIVAVVIAAGWIGFFCVVWLAARKSFRLAKRSMSASNSAISAFSYARRAH 306
            F IS ATISAIVAV++A+GWIGFFCV+ LA +KS  LAK  +S + SA+S +S+AR AH
Sbjct: 68  AFVISAATISAIVAVLVASGWIGFFCVILLATKKSVGLAKHFLSMTGSALSTYSHARVAH 127

[Close]

BLAST of Lsi09G009130 vs. TAIR10
Match: AT5G16550.1 (AT5G16550.1 unknown protein)

HSP 1 Score: 125.9 bits (315), Expect = 4.2e-29
Identity = 77/122 (63.11%), Postives = 95/122 (77.87%), Query Frame = 1


Query: 187 VGTIVLLALTGSLIFLLFFLAATLNAIIVSLLVSLAAVGGFLALFFACLTAIYIGALAVA 246
           +GTIVLL     ++F LFF+AAT NAII+SLL+SLA  GGFLALFF CLT +YIGAL+VA
Sbjct: 119 MGTIVLLTTMALVVFTLFFVAATANAIIISLLISLAVAGGFLALFFLCLTGVYIGALSVA 178

Query: 247 LFAISTATISAIVAVVIAAGWIGFFCVVWLAARKSFRLAKRSMSASNSAISAFSYARRAH 306
            F ISTAT+SA+V+V+IA+GWIGFF  VWL  R S RLAK+S+S   SAIS  + +R  H
Sbjct: 179 AFVISTATVSAVVSVLIASGWIGFFYAVWLGTRGSLRLAKQSVSVVGSAISGNTISRHQH 238

Query: 307 KD 309
           +D
Sbjct: 239 QD 240

[Close]

BLAST of Lsi09G009130 vs. NCBI nr
Match: gi|449445067|ref|XP_004140295.1| (PREDICTED: uncharacterized protein LOC101212066 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 2.1e-43
Identity = 111/122 (90.98%), Postives = 117/122 (95.90%), Query Frame = 1


Query: 187 VGTIVLLALTGSLIFLLFFLAATLNAIIVSLLVSLAAVGGFLALFFACLTAIYIGALAVA 246
           VGTIVLLA+TGSLIFL FFLAATLNAII+SLLVSLAAVGGFLALFFAC+TAIY+GAL VA
Sbjct: 101 VGTIVLLAMTGSLIFLFFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVA 160

Query: 247 LFAISTATISAIVAVVIAAGWIGFFCVVWLAARKSFRLAKRSMSASNSAISAFSYARRAH 306
           LF ISTATISAIVAVVIAAGWIGFFC+VWLA RKSF LAKRS+SASNSAISAFSYARRAH
Sbjct: 161 LFVISTATISAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAH 220

Query: 307 KD 309
           KD
Sbjct: 221 KD 222

[Close]

BLAST of Lsi09G009130 vs. NCBI nr
Match: gi|659126433|ref|XP_008463179.1| (PREDICTED: uncharacterized protein LOC103501388 [Cucumis melo])

HSP 1 Score: 179.1 bits (453), Expect = 1.2e-41
Identity = 110/122 (90.16%), Postives = 116/122 (95.08%), Query Frame = 1


Query: 187 VGTIVLLALTGSLIFLLFFLAATLNAIIVSLLVSLAAVGGFLALFFACLTAIYIGALAVA 246
           VGTIVLLA+TGSLIFLLFFLAATLNAII+SLLVSLAAVGGFLALFFAC+TAIY+GAL VA
Sbjct: 101 VGTIVLLAMTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVA 160

Query: 247 LFAISTATISAIVAVVIAAGWIGFFCVVWLAARKSFRLAKRSMSASNSAISAFSYARRAH 306
           LF ISTATISAIVAVVIAAGWIGFF +VWLA  KSF LAKRS+SASNSAISAFSYARRAH
Sbjct: 161 LFVISTATISAIVAVVIAAGWIGFFFMVWLAICKSFGLAKRSVSASNSAISAFSYARRAH 220

Query: 307 KD 309
           KD
Sbjct: 221 KD 222

[Close]

BLAST of Lsi09G009130 vs. NCBI nr
Match: gi|595939790|ref|XP_007215780.1| (hypothetical protein PRUPE_ppa009705mg [Prunus persica])

HSP 1 Score: 148.7 bits (374), Expect = 1.7e-32
Identity = 88/121 (72.73%), Postives = 104/121 (85.95%), Query Frame = 1


Query: 187 VGTIVLLALTGSLIFLLFFLAATLNAIIVSLLVSLAAVGGFLALFFACLTAIYIGALAVA 246
           VGTI L++LTG L+F+LFFLAATLNA+I+SLL+SLAA GGFLALFFAC+TAIYIGAL+VA
Sbjct: 157 VGTITLISLTGLLVFMLFFLAATLNAVIISLLLSLAAAGGFLALFFACVTAIYIGALSVA 216

Query: 247 LFAISTATISAIVAVVIAAGWIGFFCVVWLAARKSFRLAKRSMSASNSAISAFSYARRAH 306
           +F IS  TISAI AV+I  GWIGFF +VWLAA+KS  LAK+S S + SAISA+SY R AH
Sbjct: 217 VFVISATTISAIAAVLITTGWIGFFWIVWLAAKKSLGLAKQSFSVTGSAISAYSYGRHAH 276

Query: 307 K 308
           K
Sbjct: 277 K 277

[Close]

BLAST of Lsi09G009130 vs. NCBI nr
Match: gi|645278639|ref|XP_008244322.1| (PREDICTED: uncharacterized protein LOC103342472 [Prunus mume])

HSP 1 Score: 147.1 bits (370), Expect = 5.0e-32
Identity = 87/121 (71.90%), Postives = 104/121 (85.95%), Query Frame = 1


Query: 187 VGTIVLLALTGSLIFLLFFLAATLNAIIVSLLVSLAAVGGFLALFFACLTAIYIGALAVA 246
           VGTI L++LTG L+F+LFFLAAT+NAII+SLL+SLAA GGFLALFFAC+TAIYIGAL+VA
Sbjct: 101 VGTITLISLTGLLVFMLFFLAATINAIIISLLLSLAAAGGFLALFFACVTAIYIGALSVA 160

Query: 247 LFAISTATISAIVAVVIAAGWIGFFCVVWLAARKSFRLAKRSMSASNSAISAFSYARRAH 306
           +F IS  TISAI AV+I  GWIGFF +VWLAA+KS  LAK+S S + SAISA++Y R AH
Sbjct: 161 VFVISATTISAIAAVLITTGWIGFFWIVWLAAKKSLGLAKQSFSVTGSAISAYTYGRHAH 220

Query: 307 K 308
           K
Sbjct: 221 K 221

[Close]

BLAST of Lsi09G009130 vs. NCBI nr
Match: gi|672173014|ref|XP_008806622.1| (PREDICTED: uncharacterized protein LOC103719253 [Phoenix dactylifera])

HSP 1 Score: 146.4 bits (368), Expect = 8.5e-32
Identity = 87/122 (71.31%), Postives = 107/122 (87.70%), Query Frame = 1


Query: 187 VGTIVLLALTGSLIFLLFFLAATLNAIIVSLLVSLAAVGGFLALFFACLTAIYIGALAVA 246
           VGTI L+ALTG L+F+LFFLAATLNAII++ L+SLAA GGFLALFFACLTAIYIGAL+VA
Sbjct: 105 VGTITLVALTGLLVFMLFFLAATLNAIIIAFLMSLAAAGGFLALFFACLTAIYIGALSVA 164

Query: 247 LFAISTATISAIVAVVIAAGWIGFFCVVWLAARKSFRLAKRSMSASNSAISAFSYARRAH 306
           +F IST TIS I+AV+IA GW+GFF VVWL+A+KS  LAK+S+S ++SAISA+S +R A 
Sbjct: 165 VFIISTTTISTIIAVMIATGWVGFFWVVWLSAKKSMNLAKQSLSMTSSAISAYSASRHAR 224

Query: 307 KD 309
           +D
Sbjct: 225 RD 226

The following BLAST results are available for this feature:

BLAST of Lsi09G009130 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi09G009130 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNC3_CUCSA	1.5e-43	90.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G427940 PE=4 SV=1	[more]
M5WTH6_PRUPE	1.2e-32	72.73	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009705mg PE=4 SV=1	[more]
A0A067D331_CITSI	7.7e-32	73.33	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032604mg PE=4 SV=1	[more]
V4SA05_9ROSI	7.7e-32	73.33	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029179mg PE=4 SV=1	[more]
A0A067E1J1_CITSI	2.9e-31	73.33	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032586mg PE=4 SV=1	[more]

BLAST of Lsi09G009130 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16550.1	4.2e-29	63.11	unknown protein	[more]

BLAST of Lsi09G009130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445067\|ref\|XP_004140295.1\|	2.1e-43	90.98	PREDICTED: uncharacterized protein LOC101212066 [Cucumis sativus]	[more]
gi\|659126433\|ref\|XP_008463179.1\|	1.2e-41	90.16	PREDICTED: uncharacterized protein LOC103501388 [Cucumis melo]	[more]
gi\|595939790\|ref\|XP_007215780.1\|	1.7e-32	72.73	hypothetical protein PRUPE_ppa009705mg [Prunus persica]	[more]
gi\|645278639\|ref\|XP_008244322.1\|	5.0e-32	71.90	PREDICTED: uncharacterized protein LOC103342472 [Prunus mume]	[more]
gi\|672173014\|ref\|XP_008806622.1\|	8.5e-32	71.31	PREDICTED: uncharacterized protein LOC103719253 [Phoenix dactylifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005783	endoplasmic reticulum
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G009130.1	Lsi09G009130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35508	FAMILY NOT NAMED	coord: 16..100 score: 2.4E-62coord: 186..308 score: 2.4
None	No IPR available	PANTHER	PTHR35508:SF1	SUBFAMILY NOT NAMED	coord: 186..308 score: 2.4E-62coord: 16..100 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G009130	Csa5G427940	Cucumber (Chinese Long) v2	culsiB330
Lsi09G009130	CSPI05G15240	Wild cucumber (PI 183967)	cpilsiB330
Lsi09G009130	Cucsa.001330	Cucumber (Gy14) v1	cgylsiB435
Lsi09G009130	CmaCh15G007520	Cucurbita maxima (Rimu)	cmalsiB268
Lsi09G009130	CmaCh04G022840	Cucurbita maxima (Rimu)	cmalsiB622
Lsi09G009130	CmoCh04G023880	Cucurbita moschata (Rifu)	cmolsiB610
Lsi09G009130	CmoCh15G007770	Cucurbita moschata (Rifu)	cmolsiB256
Lsi09G009130	Cla009149	Watermelon (97103) v1	lsiwmB029
Lsi09G009130	MELO3C025122	Melon (DHL92) v3.5.1	lsimeB014
Lsi09G009130	ClCG01G008740	Watermelon (Charleston Gray)	lsiwcgB008
Lsi09G009130	MELO3C025122.2	Melon (DHL92) v3.6.1	lsimedB015
Lsi09G009130	Cla97C01G008970	Watermelon (97103) v2	lsiwmbB007
Lsi09G009130	Bhi12G001053	Wax gourd	lsiwgoB009
Lsi09G009130	Cp4.1LG01g19840	Cucurbita pepo (Zucchini)	cpelsiB311
Lsi09G009130	Cp4.1LG13g05380	Cucurbita pepo (Zucchini)	cpelsiB130
Lsi09G009130	CsGy5G015060	Cucumber (Gy14) v2	cgyblsiB302
Lsi09G009130	Carg18278	Silver-seed gourd	carlsiB480
Lsi09G009130	Carg01454	Silver-seed gourd	carlsiB754
Lsi09G009130	CsaV3_5G024270	Cucumber (Chinese Long) v3	cuclsiB353

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None