CmoCh15G007770 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGTACGCAATTTCACTATTTATTCACTCTCAAGATTCTCCGGATCCCAAAAAGAATGGCGGAGCCGTACGAGTCCGATGATCGGAATGGCACCGTGCCCGCTCCGGTCGAGGTAGAATATGCAACAAGTCACAAATCCAAAGGAATGCGTAGTGAGGATCAGGCCGTTTATGTACTTGTCCGCCGTCTGATCGCCGAGATTTTCTTCCCCGATGAAACTAAGGGTTCTTTTTCTCAACGCGTCAAGGCCTCCGTCGCCGAGAATGGCCCTGCCGTTGCACAAGCTTGCAGAAACTTTGGTCACGATATTCTTTGTTGGACTCGCAGGGGCAGTCCTCTTCGAGCGCTCCTTGTTATCTCCGTGAGTATTACTGATAATTCCAAAATGGAGCTTGTCTGGACTTGTTTTTCTTTTTTTTTGAAACAAGAAACGTCGTCTGGACTTGTTTATTTAATTTGAGATGCTCTTCGTTTAGTAATTAATGGATTTTGTACAACTGTTTGAGATTTTGATTTTATCGCTTGAATAGTACTGTATCTGTTGTTTTTCGGTTTTTGTTTGAAGGTTACGATTGATCTGGACGGGATTTATTGTTAATAGGAATATATTTCCTCAGCAATGAATACTATTAGAGACAGCTCCAATGTTAATAGATGGGCAACCTTGATAGTAACATGCAGGACTCTCGAACTCTTCTGTTCCTTACAATCATGGAATTTTATTCTGATGTGATCCTTGTAGTGAAGCCTATTGATATGTTCTTGGTAACAATAGGTTTCCATTGATCATATAATATCTCTAATTCTGTCTACATTTTGGGAAGTTTGGATACAGAACTGTTATAGGATCTTCATTGATACTCTTATGGTTAGCGAAGGTGTGTGAGAGATTTTAAATTTCTGGATTCCTTATGGAATTCTCTTAATTTCTTTTGTGATTTTGACTCCTTTATTTGTGCCAATGGTAAGAATTCGTTCGTGTTCGTATCTCTTTTATATCGGTATGGGCCACTGATATCTCATGTCCCTATCTCTTAGTATTTCTGTTAATGAAAATTTTCCTATCTAAATAAATATAAACGAGGATAAATTGATAGGAATTGTTACCATCCATGGGAAGCAACTATTGAAAAGATATGTAAAGATACGTAAAGATATGTTTCACAAGCCAAAGATGTTAGGAATCACGAACCTCCACAATGATATGATATTGTTCACTTTGAGCATAAACTCTTACTTTAGGCTTCCCCAAAAGGCCTCGTACCAATGGAGATGTATTCCTTACTTATAAACCCATGATCATTCCCTAAATTAGTCCATGTGGGACTCACTCAACAAAAGATACCGAATAGTTTCTTACCGATTAATGATTCGTACTCTGTCATTGGTCATTTGATCTATTTTGGATCTGTTGCAAGATTTTCACTGTAATAGTCCTCTCTCCATCTTCTACACGCATAGAGAGACTGAAGTCCTTTTGTATGCTCTGGCCAGAACCCCTTTAAGTTGTTACTTACATTTGGAATTGTTGCAGGTTGGGACAATTTCTCTTCTTGCATCGACGGGATTGCTCATCTTTCTGCTATTCATTCTAGCAGCAACTCTCAATGCTGTTATTATCTCCCTTCTTGTTTCCTTGGCTGCAGTGGGAGGCTTCTTGACTCTTTTCTTTGCTTGCATAACAGCTGTGTACATTGGGGCATTAACAGTTGCTTTGTTTTTTATATCTACTGCAACAATCTCAGCCATTGTAGCAGTGGTGATCGCCACAGGTACAAGCAATATATACACTTATCTAAACCATGTTTCTTGATAACCTCTCATCCCATTGACATAAATCAGTCATATTGATTTGACGTGGGTCTGTCTCATAAGGAAAACATGAACATGTAGTTTGCGGCTTTCTAGCATTATATTTCTGCTTTCTCTATCGTTGAGTTATCCTGTTCTCCACCACACAATTTGAATAGTTTAAGCTAAGAGTTTGTGTGAAATCTATCATCGGTTGGAGAGGGGAACAAAACATTCTTCATAAAGGTGTGAAAATTTCTCCCGAACAGATGTGTTTTAAAAAACCTTAAAAGGAAGCTTGAAATGAAAAGCTTAAAGAGGGCAACATCTGCCAGTGGTGGGCTTGGGTTGTTACATAAACTAAACCAGAGGATCCTGAGAAGTTCCACGAAGCCATACACTAGTCAATGACTTTCCTTTGATTTTGTCTCTGTTTCATTCAACTAGACCTTGGGTCAATTGTGCGCTTTTGGGGATAAAATTCTTTCTTTTCTCTAACATTTTGCATTTTCACAACTCAGGTTGGATTGGGTTCTTCTTTATGGTTTGGCTAGCAGTATGGAAAAGTTTTGGTCTTGCTAAGCGGTCGATGAGCGTGAGCAATTCAGCAATTTCAGCATTTTCTTATGCTAGGCGTGCCCACAAAGACTAGGTATGATTCAAATGAGTTAAATGAATGCTATGAATTGGAATATGTTGCTTCACTCATTTTTCCCTCTCCCGAGAGTCACTTTTTTGGAAGATCTGCTGCATATGTTGTTGAGTTTAAAGGCCTTGGTAGTATAATATCCATAATGTGTGCTTGTAATGTAAGTATTCTTTATAAGTATACTATTTTACGGGCTCCTTTATTGGTGAGCGATGAAAGTACCAAACATTGAAGATAGAGCTTCAAAGAAATATAGTCGTAACTCAAGTAAAAGAGGATCCTCTTTACCTTGAAATGTTTGAATATGAGAACCAAAAAAT CAGTACGCAATTTCACTATTTATTCACTCTCAAGATTCTCCGGATCCCAAAAAGAATGGCGGAGCCGTACGAGTCCGATGATCGGAATGGCACCGTGCCCGCTCCGGTCGAGGTAGAATATGCAACAAGTCACAAATCCAAAGGAATGCGTAGTGAGGATCAGGCCGTTTATGTACTTGTCCGCCGTCTGATCGCCGAGATTTTCTTCCCCGATGAAACTAAGGGTTCTTTTTCTCAACGCGTCAAGGCCTCCGTCGCCGAGAATGGCCCTGCCGTTGCACAAGCTTGCAGAAACTTTGGTCACGATATTCTTTGTTGGACTCGCAGGGGCAGTCCTCTTCGAGCGCTCCTTGTTATCTCCGTTGGGACAATTTCTCTTCTTGCATCGACGGGATTGCTCATCTTTCTGCTATTCATTCTAGCAGCAACTCTCAATGCTGTTATTATCTCCCTTCTTGTTTCCTTGGCTGCAGTGGGAGGCTTCTTGACTCTTTTCTTTGCTTGCATAACAGCTGTGTACATTGGGGCATTAACAGTTGCTTTGTTTTTTATATCTACTGCAACAATCTCAGCCATTGTAGCAGTGGTGATCGCCACAGGTTGGATTGGGTTCTTCTTTATGGTTTGGCTAGCAGTATGGAAAAGTTTTGGTCTTGCTAAGCGGTCGATGAGCGTGAGCAATTCAGCAATTTCAGCATTTTCTTATGCTAGGCGTGCCCACAAAGACTAGGTATGATTCAAATGAGTTAAATGAATGCTATGAATTGGAATATGTTGCTTCACTCATTTTTCCCTCTCCCGAGAGTCACTTTTTTGGAAGATCTGCTGCATATGTTGTTGAGTTTAAAGGCCTTGGTAGTATAATATCCATAATGTGTGCTTGTAATGTAAGTATTCTTTATAAGTATACTATTTTACGGGCTCCTTTATTGGTGAGCGATGAAAGTACCAAACATTGAAGATAGAGCTTCAAAGAAATATAGTCGTAACTCAAGTAAAAGAGGATCCTCTTTACCTTGAAATGTTTGAATATGAGAACCAAAAAAT ATGGCGGAGCCGTACGAGTCCGATGATCGGAATGGCACCGTGCCCGCTCCGGTCGAGGTAGAATATGCAACAAGTCACAAATCCAAAGGAATGCGTAGTGAGGATCAGGCCGTTTATGTACTTGTCCGCCGTCTGATCGCCGAGATTTTCTTCCCCGATGAAACTAAGGGTTCTTTTTCTCAACGCGTCAAGGCCTCCGTCGCCGAGAATGGCCCTGCCGTTGCACAAGCTTGCAGAAACTTTGGTCACGATATTCTTTGTTGGACTCGCAGGGGCAGTCCTCTTCGAGCGCTCCTTGTTATCTCCGTTGGGACAATTTCTCTTCTTGCATCGACGGGATTGCTCATCTTTCTGCTATTCATTCTAGCAGCAACTCTCAATGCTGTTATTATCTCCCTTCTTGTTTCCTTGGCTGCAGTGGGAGGCTTCTTGACTCTTTTCTTTGCTTGCATAACAGCTGTGTACATTGGGGCATTAACAGTTGCTTTGTTTTTTATATCTACTGCAACAATCTCAGCCATTGTAGCAGTGGTGATCGCCACAGGTTGGATTGGGTTCTTCTTTATGGTTTGGCTAGCAGTATGGAAAAGTTTTGGTCTTGCTAAGCGGTCGATGAGCGTGAGCAATTCAGCAATTTCAGCATTTTCTTATGCTAGGCGTGCCCACAAAGACTAG
BLAST of CmoCh15G007770 vs. TrEMBL
Match: A0A0A0KNC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G427940 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 2.0e-82 Identity = 179/224 (79.91%), Postives = 194/224 (86.61%), Query Frame = 1
BLAST of CmoCh15G007770 vs. TrEMBL
Match: M5WTH6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009705mg PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 3.1e-54 Identity = 135/231 (58.44%), Postives = 168/231 (72.73%), Query Frame = 1
BLAST of CmoCh15G007770 vs. TrEMBL
Match: V4SA05_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029179mg PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.5e-53 Identity = 132/225 (58.67%), Postives = 166/225 (73.78%), Query Frame = 1
BLAST of CmoCh15G007770 vs. TrEMBL
Match: A0A067KI39_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10524 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 4.4e-53 Identity = 123/201 (61.19%), Postives = 155/201 (77.11%), Query Frame = 1
BLAST of CmoCh15G007770 vs. TrEMBL
Match: W9S3F9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007805 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 8.3e-52 Identity = 119/200 (59.50%), Postives = 156/200 (78.00%), Query Frame = 1
BLAST of CmoCh15G007770 vs. TAIR10
Match: AT5G16550.1 (AT5G16550.1 unknown protein) HSP 1 Score: 184.5 bits (467), Expect = 7.2e-47 Identity = 110/192 (57.29%), Postives = 140/192 (72.92%), Query Frame = 1
BLAST of CmoCh15G007770 vs. NCBI nr
Match: gi|659126433|ref|XP_008463179.1| (PREDICTED: uncharacterized protein LOC103501388 [Cucumis melo]) HSP 1 Score: 317.4 bits (812), Expect = 2.0e-83 Identity = 180/224 (80.36%), Postives = 195/224 (87.05%), Query Frame = 1
BLAST of CmoCh15G007770 vs. NCBI nr
Match: gi|449445067|ref|XP_004140295.1| (PREDICTED: uncharacterized protein LOC101212066 [Cucumis sativus]) HSP 1 Score: 313.5 bits (802), Expect = 2.9e-82 Identity = 179/224 (79.91%), Postives = 194/224 (86.61%), Query Frame = 1
BLAST of CmoCh15G007770 vs. NCBI nr
Match: gi|595939790|ref|XP_007215780.1| (hypothetical protein PRUPE_ppa009705mg [Prunus persica]) HSP 1 Score: 219.9 bits (559), Expect = 4.4e-54 Identity = 135/231 (58.44%), Postives = 168/231 (72.73%), Query Frame = 1
BLAST of CmoCh15G007770 vs. NCBI nr
Match: gi|567862776|ref|XP_006424042.1| (hypothetical protein CICLE_v10029179mg [Citrus clementina]) HSP 1 Score: 217.6 bits (553), Expect = 2.2e-53 Identity = 132/225 (58.67%), Postives = 166/225 (73.78%), Query Frame = 1
BLAST of CmoCh15G007770 vs. NCBI nr
Match: gi|568869206|ref|XP_006487819.1| (PREDICTED: uncharacterized protein LOC102620494 [Citrus sinensis]) HSP 1 Score: 216.5 bits (550), Expect = 4.8e-53 Identity = 132/222 (59.46%), Postives = 167/222 (75.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |