Csa5G427940 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G427940
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr5 : 15490823 .. 15495637 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCATCTCCGTCAATCTAACGATACGCTTCTATCCAGAGAAAAGGCGACACCCAAATTATTAACTCACTACACATTTTCACTATTTATTGATTCTTAAGCGTCGCCGGAGCCTCTCAGAAATGGCGGAAGCGCACGACTCCGATGATCGGAATACCACCGTGCCGGTTGAGGAAGAAGATGCATCCAGTCATCAATCCAAAGGAGTGTGTACGGAGGATCAGACCGTTTATGAACCTCTCCGCCGTCTGATCGCTGAGATTTTCTTTCCCGATGAAATTAAGGGTTCTTTGTTTCATCGCGTCAAGGTCTCTGTCACTGATAATGGCCCTGCCGTTGCACAAGCTTGCAGAAACTTTGGTCGCGACGTTCTTTCTTGGACTCGTAGGGGCAGTCCTCTGCGAGCGCTCCTTGTTATCTCTGTGAGTATTGCCGATAATTCTAAAGTTGTGGATGTATGAACTTTTTTATTGTGTTTAAAGTGCATTTCTCTCAGTAATTAATGGATTGTGTGCTAATGTTCGAGATTATGATTTTATTGCTTTTTGGTTTTTCTTTTAAGGTTTCGCTTGATTTGGACGGGATTTGTTGTTAATAAGAATATGTTTTACTTGGTAATGAATACTGTCAAGCAATTTCCAGCTCATGGCCAAAATTGCAGAGAGTGCTTGAGTGGCCGTGTTTTTGACTTTTGGAGAAAAGATTTTGTTGAAGTGCTTTTGTTCGATTCCTTTGCGTACTACTTTTTATACACTCTTTGTAGTTGAACCAAAAAAGTCCTCTGGCTTCGTTCTTACACAGATCCAATTAATGCTCCCCATCTTTTGCTGTTTGGCTTCTAGTACCCGTTATCAAGTGTTGTTCCTGTGGAGGGAGGTGATCCCTTGTTCCTTGGCCCTTGGCCATCCTTTGCATGGTATAAGATTGGAATTGTACTTATGTGCTTCGTAAACTTCCAATTCTCATACGTTGCCATCCTTTTTGGTTGAAGATAATTATTTTCATGGTTGCAGCTATTGGAGATAGCTCATATGTTAATACCTGAGCAATCCTGAGAATGCGTACCCCATTTTTTCAATCTATTCTACAGCAACGGTAGAATTTCATTTCATTTTATTTGTCTTTTTTTTTGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAAAAGAAAAGAAAAGGAAACAAAAAAAGAAGTAAGAAATGAGTTGTAAAGGGGGGGGGGGGGGGGGGGATTTTTTAAGCATTTTCACCTAGATTGTGAACCTTATGTCGGTATGACGTTTGGAATGAGATTGGCTCTTTTTCTTTTTTTGTTGAGAAATAGAGAATTCCTTGACAACTTCAAATGCTAACTTTATTATTCCTAAATACGTGGCAAATGTTCAGTCTAGAGCAAGTTGACACATTTTCCCAATATTCTTTGTTTTGGAGGAATTTACACGCTCTAACTTCTCTCCCTCATGCATTTGGCAAATCAAGTTTGTCATCGAGTTTTGAGATCATGTAAATCATACTTGGAGGATTTTGACTTTATGAATTGAATGAAGGTTCTAACTTCTCTTTTGTTGTTTTGTCTTCAATAGACAACAGATTCTCTTTGATGTCCATTTTCTTGAGTTTCATTGTTCTGATTTTGTTATTTTTTAAGGACTATTAACTGTGTGTAAGCTGGAGTGGTTTAGGGTTTCTTTTTAGTTTGTTTTGGGGTCTTGTTCCTTTGAAGTACACAGCTCTTGGAAGTTTGACTTTTGTAGTAAAGTTTGGTTAATCGATGGTAACATCCATGGAAAAGTAAACTTTCTTCGTCATGAGAGAGTAATATATCTTTTGGTAACATCTCTTTTGGTTAGAGACATAGCCTAGAAAGATATATTTATTAGCTTCAGGTTCAATTTTACTTCCTTTTAGGAGAGTGATTATGGGTAAAGGCAATTTAACAAAAACATTTAAGAACAAATATTCATAGTGGCATGTAAAGATTTTCAAACTCTATTTATTTCTCACAATCAAGGATTTTCTTTATGATATGATCCTTGTAGTGCATTTTTACAGGAGTTATAATTGAAGCCTATTGATATGTTTTTAGGTTGGCTTTAATCCTATGATAATTCTTTTATTTTTGGGCAGTTTGGATACAGAAGCGTTATAGGATCTTCATTGGGTACTTTTATGGTTGGAGAAGATGTGTGAGAGATTTTAAATTTCTGTATTCCATATGGAGATCTCTCAAGTTCTTTTGTAATTTTGACTCCCTCTTTTATTGGTGCCAATTGTAATAGTCCGTGTTTTTTTAACATTGTTATGTGTCGTTGACATCTCACCTCCCTCTCCTAGTTTTTCTGTTAATGAAAACTTTTCAATCTAAGAGAGGATTAAATTAGGAGAAATTGATAGGAATTTGATAGACCACCTATTGTCCTGCAGTACAGTAGGAGAGGAAAGAAAGGTTTGGAACGTGTAAAAGGGGATCATGTGGGAATCCAAATTAATTAGAGTTTGTTACTAATTCTGGAAGTATAAATAGTGTCTCTTTTAGGGGAGGGAGAGTTAGTTAGTTGTATTCTGAATTTCTGTTTCATCCTTGAGAGATAGGATAGCAGAGAGGGAAGAGTGTGCCCTAGTTACCGAATTGAGACTCTCTCAATTCATTCTTCTATATTTCACCATATTGTACTGTTTGATTTCATCCCATCAATAACATCAGAATAATTTTCATTCTTGATATTCAAATTTGGGCTCCACAAGAATTGTTACGATGAATTAGAAAGGATTCTGGCTTTTGACACTTGATTCAAGGAGGATGTAACCATTGAACTGGTATATAACACTAGTCATGCATGGGTATCGGATAGTTTGATACTGATGAATGATGTGTATTGTGCCTTGGTTCCTCTTGACTGCTTTTATCTATTTTGGATCTGTTGCAAAATTTTCACTGTAGTTGTCCTCTCTATTTTCCACACACAGAGACAAACTGAAGTGCTTTTTTATGTTCTCACCAGCACCCCTTTAAGTTGTTACTTACATCTGAAACTGCTGCAGGTTGGGACAATTGTTCTTCTTGCAATGACGGGATCGCTCATCTTTCTGTTCTTCTTTCTGGCAGCCACTCTCAATGCCATTATTATCTCTCTTCTTGTATCCTTGGCAGCAGTTGGAGGCTTCTTGGCTCTTTTCTTTGCTTGCGTAACAGCCATATATGTGGGGGCATTAGGAGTTGCTTTGTTTGTTATATCTACTGCAACAATCTCAGCAATTGTAGCAGTGGTGATCGCCGCAGGTACCAATAATATACACTTCTCTAAATCACGTTTCTTGAAAACCTCTTAACCAACTGGTATGAAATTCTACGTATTGGTTTGAAATGGTTGGGTCTCAGTCTCATAAGGGAAACGAAAAACATCAACATTATCCTCCCATCTTTTCTGTAGGAATAAACAAAATATAATCGAGATGTTAAAAGAAAATAACAGTGGAAACACAAAAATCACATGGAAAATTCTTAATGCCCCCCATAAAGAAATCTACTACGGGTAGAATTATTACATCCACAGACAATTCTCTTCTCGATTCTGATTGCTAGAATTCTCTCTCAAAACTTTGATGTACCACCACTCACGCACCTTTTCCTGCTTTTTGACTAGAGTAGTACACTCAGTAACCAAGCTTAAAATGCTGCTCCTTTATAGTGTTTGGTACCCATTTGATGTAAGAAGAATAGGGTTTACTTGGGTACTTGGGTAATATTCTAGGTTAATTCTCTTTTTACTCCCACCTGTAATAAAATTCTATTGGTAAGACTCTTCCCCTCTTGTATGAAACAATTGTTATCATTCTAATAAAAGATTCATAATTTGATTCTTGGAGGATTACTCCTTAAGACTACTTAGGCTCATCAGTTCATTTTTATGAGTCTTTGCTACTCTTCTAATATTTTGCCGAAAGCCTTATAATCGTATAGTTAGCAGTTTGATAACTTTTTGTTTCTACTCTTCCTTTTCTCTACCCACAATTTAAATTGTATCTTCAATCATTAGGATGAATTTAACTTGTACACACCAATGAAAATGTTGTAAGCTAAGAGTTTCTTAACGAATCGGAGGATCCAGAGAAGTTCTGCCTTCTATTAAACAAATGCACATACTAGTCAATGATTTTCCACTGATTTTGTTTGTCTTCATGAGAGTAGACCTTGGGTCAATTGGTCACTTTTGGGCGGTTGCCATATTTTTCTGTGCTCTAACATCTTACCTTCTCAAAATTCAGGATGGATTGGGTTCTTCTGTATGGTTTGGCTAGCAATACGCAAAAGTTTTGGTCTTGCGAAGCGGTCAGTGAGTGCGAGCAATTCAGCAATTTCAGCATTTTCTTATGCTAGGCGTGCCCACAAAGACTAGGTAAATGTTTCAGATCCTTTAAATGAATGCTATGAAGTGGGGTATGTTATTCTCAAAATTCTGGTGCATATATTATAATGAGTTTTCGAAGGCCTTTTTAGTGTATCCATAATGTGTAATCTTACAATGTAAATAATCTTTTAAAAGTATATTATCTACTTTATGGGCTTCTTTATTGGCGATGAAAGTACTAAGATTTGAGATAGCTCTTCCATGAACTATAATCATAATTTTTAAGTATATTTCTTTTTCTTTCACTATGAACTGTAATTGTCAAAATTTTATAGGATTAAAATTTAAGGAGTCCAATCAGGGTTTGTTTGACTCAATGACTTCCTAAGTTTGAGGTTGGAACTTATGTATTCGATTGTTCAAGGGAATGGATTATATAAATTCAAGTGTG

mRNA sequence

ATGGCGGAAGCGCACGACTCCGATGATCGGAATACCACCGTGCCGGTTGAGGAAGAAGATGCATCCAGTCATCAATCCAAAGGAGTGTGTACGGAGGATCAGACCGTTTATGAACCTCTCCGCCGTCTGATCGCTGAGATTTTCTTTCCCGATGAAATTAAGGGTTCTTTGTTTCATCGCGTCAAGGTCTCTGTCACTGATAATGGCCCTGCCGTTGCACAAGCTTGCAGAAACTTTGGTCGCGACGTTCTTTCTTGGACTCGTAGGGGCAGTCCTCTGCGAGCGCTCCTTGTTATCTCTGTTGGGACAATTGTTCTTCTTGCAATGACGGGATCGCTCATCTTTCTGTTCTTCTTTCTGGCAGCCACTCTCAATGCCATTATTATCTCTCTTCTTGTATCCTTGGCAGCAGTTGGAGGCTTCTTGGCTCTTTTCTTTGCTTGCGTAACAGCCATATATGTGGGGGCATTAGGAGTTGCTTTGTTTGTTATATCTACTGCAACAATCTCAGCAATTGTAGCAGTGGTGATCGCCGCAGGATGGATTGGGTTCTTCTGTATGGTTTGGCTAGCAATACGCAAAAGTTTTGGTCTTGCGAAGCGGTCAGTGAGTGCGAGCAATTCAGCAATTTCAGCATTTTCTTATGCTAGGCGTGCCCACAAAGACTAG

Coding sequence (CDS)

ATGGCGGAAGCGCACGACTCCGATGATCGGAATACCACCGTGCCGGTTGAGGAAGAAGATGCATCCAGTCATCAATCCAAAGGAGTGTGTACGGAGGATCAGACCGTTTATGAACCTCTCCGCCGTCTGATCGCTGAGATTTTCTTTCCCGATGAAATTAAGGGTTCTTTGTTTCATCGCGTCAAGGTCTCTGTCACTGATAATGGCCCTGCCGTTGCACAAGCTTGCAGAAACTTTGGTCGCGACGTTCTTTCTTGGACTCGTAGGGGCAGTCCTCTGCGAGCGCTCCTTGTTATCTCTGTTGGGACAATTGTTCTTCTTGCAATGACGGGATCGCTCATCTTTCTGTTCTTCTTTCTGGCAGCCACTCTCAATGCCATTATTATCTCTCTTCTTGTATCCTTGGCAGCAGTTGGAGGCTTCTTGGCTCTTTTCTTTGCTTGCGTAACAGCCATATATGTGGGGGCATTAGGAGTTGCTTTGTTTGTTATATCTACTGCAACAATCTCAGCAATTGTAGCAGTGGTGATCGCCGCAGGATGGATTGGGTTCTTCTGTATGGTTTGGCTAGCAATACGCAAAAGTTTTGGTCTTGCGAAGCGGTCAGTGAGTGCGAGCAATTCAGCAATTTCAGCATTTTCTTATGCTAGGCGTGCCCACAAAGACTAG

Protein sequence

MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHRVKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLFFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD*

Homology

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BLAST of Csa5G427940 vs. TrEMBL
Match: A0A0A0KNC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G427940 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 3.3e-117
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1


Query: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHR 60
           MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHR
Sbjct: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHR 60

Query: 61  VKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLFFFL 120
           VKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLFFFL
Sbjct: 61  VKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLFFFL 120

Query: 121 AATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAAG 180
           AATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAAG
Sbjct: 121 AATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAAG 180

Query: 181 WIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD 223
           WIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD
Sbjct: 181 WIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD 222

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BLAST of Csa5G427940 vs. TrEMBL
Match: V4SA05_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029179mg PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.2e-63
Identity = 129/211 (61.14%), Postives = 163/211 (77.25%), Query Frame = 1


Query: 14  VPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDE----IKGSLFHRVKVSVTDNG 73
           VPV+++DA+  + KG+  +D+T+Y  + R+   I FPD        SL  R+K+S+++NG
Sbjct: 21  VPVDDDDATK-KYKGIPCDDETLYGVIHRMFTMILFPDSNSRVASFSLLRRIKISLSENG 80

Query: 74  PAVAQACRNFGRDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLFFFLAATLNAIII 133
             + QA RN GR VL WTRRGSP+RAL VISVGTI LL +TG L+F+ FFLAAT+NAIII
Sbjct: 81  SHLRQASRNTGRKVLLWTRRGSPIRALFVISVGTITLLTLTGLLVFMLFFLAATINAIII 140

Query: 134 SLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAAGWIGFFCMVW 193
           SLLVSLAA GGFLALFFAC+TAIY+GAL VA FVIS AT+SAIVAV+IA+GWIGFFC++W
Sbjct: 141 SLLVSLAAAGGFLALFFACLTAIYIGALSVAAFVISAATVSAIVAVLIASGWIGFFCVIW 200

Query: 194 LAIRKSFGLAKRSVSASNSAISAFSYARRAH 221
           LA +KS GLAK  +  + SA+S +S AR AH
Sbjct: 201 LATKKSVGLAKHFLGMTGSALSTYSRARVAH 230

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BLAST of Csa5G427940 vs. TrEMBL
Match: M5WTH6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009705mg PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.0e-61
Identity = 134/225 (59.56%), Postives = 162/225 (72.00%), Query Frame = 1


Query: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGS---- 60
           MAE + +   N  V V+  D     +K    E+ T++    RLI  IFFP          
Sbjct: 57  MAEPYGT---NGAVDVDVTDDGEINTKATHREE-TLFGVFHRLIDAIFFPGSTSAGTAAP 116

Query: 61  LFHRVKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFL 120
           LF R+K S+ +N P + +A RN GR+VL WTRRGSPLRALLVISVGTI L+++TG L+F+
Sbjct: 117 LFRRIKNSLAENCPLLREASRNSGRNVLLWTRRGSPLRALLVISVGTITLISLTGLLVFM 176

Query: 121 FFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVV 180
            FFLAATLNA+IISLL+SLAA GGFLALFFACVTAIY+GAL VA+FVIS  TISAI AV+
Sbjct: 177 LFFLAATLNAVIISLLLSLAAAGGFLALFFACVTAIYIGALSVAVFVISATTISAIAAVL 236

Query: 181 IAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHK 222
           I  GWIGFF +VWLA +KS GLAK+S S + SAISA+SY R AHK
Sbjct: 237 ITTGWIGFFWIVWLAAKKSLGLAKQSFSVTGSAISAYSYGRHAHK 277

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BLAST of Csa5G427940 vs. TrEMBL
Match: W9S3F9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007805 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.4e-61
Identity = 125/210 (59.52%), Postives = 159/210 (75.71%), Query Frame = 1


Query: 16  VEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPD---EIKGS-LFHRVKVSVTDNGPA 75
           +EE    +  ++    +D+T+   + RLI+EI FPD   +  G+ L  R+K SV +NGP 
Sbjct: 1   MEENSNDTGANRAHRRDDETLNGVVHRLISEILFPDASGDTAGAPLLQRIKTSVAENGPL 60

Query: 76  VAQACRNFGRDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLFFFLAATLNAIIISL 135
           + +A RN   +VL WTRRGSPLRALLVISVGTI LLA+TG L+F+ FFL AT NAI++SL
Sbjct: 61  LPEASRNTASNVLLWTRRGSPLRALLVISVGTITLLALTGLLVFMVFFLVATFNAIVVSL 120

Query: 136 LVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAAGWIGFFCMVWLA 195
           L+SLAA GGFLALFFACVTAIY+GAL +A FVIST  I+ I+AV+IAAGWIGFFC VWL 
Sbjct: 121 LISLAAAGGFLALFFACVTAIYIGALSIAAFVISTTAITTIIAVLIAAGWIGFFCTVWLV 180

Query: 196 IRKSFGLAKRSVSASNSAISAFSYARRAHK 222
           I+KS GLAK S+S ++SA+SA+S AR  H+
Sbjct: 181 IKKSLGLAKHSLSMTSSALSAYSTARHTHQ 210

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BLAST of Csa5G427940 vs. TrEMBL
Match: A0A067KI39_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10524 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 4.4e-61
Identity = 125/201 (62.19%), Postives = 153/201 (76.12%), Query Frame = 1


Query: 25  QSKGVCTEDQTVYEPLRRLIAEIFFPDEIKG----SLFHRVKVSVTDNGPAVAQACRNFG 84
           + KGV  +D+T+Y  L  L+A IF P+        S   R+K+SV++NGP +  A +N G
Sbjct: 19  EKKGVHRKDETLYSVLHSLLAMIFVPESGSSVAAESFLQRIKISVSENGPLLKDATKNTG 78

Query: 85  RDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLFFFLAATLNAIIISLLVSLAAVGG 144
           R VL WTRRGSPLRALLVISVGTI LL +TG L+F+ FFLAAT+NAI++SLL+SLAA GG
Sbjct: 79  RKVLLWTRRGSPLRALLVISVGTITLLTLTGLLVFMLFFLAATVNAIVVSLLISLAAAGG 138

Query: 145 FLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAAGWIGFFCMVWLAIRKSFGLAK 204
           FLALFFACVTA+Y+GAL VALFVIST  ISAIVAV+IA GWIGFF  VWL  +KS G+AK
Sbjct: 139 FLALFFACVTAVYIGALSVALFVISTTAISAIVAVLIATGWIGFFWTVWLVTKKSVGVAK 198

Query: 205 RSVSASNSAISAFSYARRAHK 222
            S+S + SAISA+S AR   +
Sbjct: 199 HSLSMTGSAISAYSSARHLRR 219

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BLAST of Csa5G427940 vs. TAIR10
Match: AT5G16550.1 (AT5G16550.1 unknown protein)

HSP 1 Score: 205.7 bits (522), Expect = 3.0e-53
Identity = 108/192 (56.25%), Postives = 134/192 (69.79%), Query Frame = 1


Query: 34  QTVYEPLRRLIAEIFFPDEIKG---SLFHRVKVSVTDNGPAVAQACRNFGRDVLSWTRRG 93
           +++Y  +   I  I FPD   G   S   RV+ SV +NGP + +A    GR++L WTRRG
Sbjct: 49  KSLYSLICLTIGSILFPDSKTGDASSFLERVRNSVAENGPKLREASERTGREILLWTRRG 108

Query: 94  SPLRALLVISVGTIVLLAMTGSLIFLFFFLAATLNAIIISLLVSLAAVGGFLALFFACVT 153
           S LRALLVI++GTIVLL     ++F  FF+AAT NAIIISLL+SLA  GGFLALFF C+T
Sbjct: 109 SSLRALLVITMGTIVLLTTMALVVFTLFFVAATANAIIISLLISLAVAGGFLALFFLCLT 168

Query: 154 AIYVGALGVALFVISTATISAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAI 213
            +Y+GAL VA FVISTAT+SA+V+V+IA+GWIGFF  VWL  R S  LAK+SVS   SAI
Sbjct: 169 GVYIGALSVAAFVISTATVSAVVSVLIASGWIGFFYAVWLGTRGSLRLAKQSVSVVGSAI 228

Query: 214 SAFSYARRAHKD 223
           S  + +R  H+D
Sbjct: 229 SGNTISRHQHQD 240

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BLAST of Csa5G427940 vs. NCBI nr
Match: gi|449445067|ref|XP_004140295.1| (PREDICTED: uncharacterized protein LOC101212066 [Cucumis sativus])

HSP 1 Score: 429.1 bits (1102), Expect = 4.7e-117
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1


Query: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHR 60
           MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHR
Sbjct: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHR 60

Query: 61  VKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLFFFL 120
           VKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLFFFL
Sbjct: 61  VKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLFFFL 120

Query: 121 AATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAAG 180
           AATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAAG
Sbjct: 121 AATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAAG 180

Query: 181 WIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD 223
           WIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD
Sbjct: 181 WIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD 222

[Close]

BLAST of Csa5G427940 vs. NCBI nr
Match: gi|659126433|ref|XP_008463179.1| (PREDICTED: uncharacterized protein LOC103501388 [Cucumis melo])

HSP 1 Score: 402.5 bits (1033), Expect = 4.7e-109
Identity = 211/222 (95.05%), Postives = 213/222 (95.95%), Query Frame = 1


Query: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHR 60
           MAEAHDSD RNTTVPVEEEDASSHQSKG+  +DQTVYEPLRRLIAEIFFPDEIKGSLFHR
Sbjct: 1   MAEAHDSDARNTTVPVEEEDASSHQSKGLSIDDQTVYEPLRRLIAEIFFPDEIKGSLFHR 60

Query: 61  VKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLFFFL 120
           VKVSV DNGPAV QACRNFG DVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFL FFL
Sbjct: 61  VKVSVADNGPAVGQACRNFGHDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLLFFL 120

Query: 121 AATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAAG 180
           AATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAAG
Sbjct: 121 AATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAAG 180

Query: 181 WIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD 223
           WIGFF MVWLAI KSFGLAKRSVSASNSAISAFSYARRAHKD
Sbjct: 181 WIGFFFMVWLAICKSFGLAKRSVSASNSAISAFSYARRAHKD 222

[Close]

BLAST of Csa5G427940 vs. NCBI nr
Match: gi|567862776|ref|XP_006424042.1| (hypothetical protein CICLE_v10029179mg [Citrus clementina])

HSP 1 Score: 251.1 bits (640), Expect = 1.8e-63
Identity = 129/211 (61.14%), Postives = 163/211 (77.25%), Query Frame = 1


Query: 14  VPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDE----IKGSLFHRVKVSVTDNG 73
           VPV+++DA+  + KG+  +D+T+Y  + R+   I FPD        SL  R+K+S+++NG
Sbjct: 21  VPVDDDDATK-KYKGIPCDDETLYGVIHRMFTMILFPDSNSRVASFSLLRRIKISLSENG 80

Query: 74  PAVAQACRNFGRDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLFFFLAATLNAIII 133
             + QA RN GR VL WTRRGSP+RAL VISVGTI LL +TG L+F+ FFLAAT+NAIII
Sbjct: 81  SHLRQASRNTGRKVLLWTRRGSPIRALFVISVGTITLLTLTGLLVFMLFFLAATINAIII 140

Query: 134 SLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAAGWIGFFCMVW 193
           SLLVSLAA GGFLALFFAC+TAIY+GAL VA FVIS AT+SAIVAV+IA+GWIGFFC++W
Sbjct: 141 SLLVSLAAAGGFLALFFACLTAIYIGALSVAAFVISAATVSAIVAVLIASGWIGFFCVIW 200

Query: 194 LAIRKSFGLAKRSVSASNSAISAFSYARRAH 221
           LA +KS GLAK  +  + SA+S +S AR AH
Sbjct: 201 LATKKSVGLAKHFLGMTGSALSTYSRARVAH 230

[Close]

BLAST of Csa5G427940 vs. NCBI nr
Match: gi|568869206|ref|XP_006487819.1| (PREDICTED: uncharacterized protein LOC102620494 [Citrus sinensis])

HSP 1 Score: 250.8 bits (639), Expect = 2.3e-63
Identity = 132/222 (59.46%), Postives = 170/222 (76.58%), Query Frame = 1


Query: 4   AHDSDDRNTT-VPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDE----IKGSLF 63
           +++SD  N   VPV+++DA+  + KG+  +D+T+Y  + R+   I FPD        SL 
Sbjct: 6   SYESDGLNGVGVPVDDDDATK-KYKGIPCDDETLYGVIHRMFTMILFPDSNSRVASFSLL 65

Query: 64  HRVKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFLFF 123
            R+K+S+++NG  + QA RN GR VL WTRRGSP+RAL VISVGTI LL +TG L+F+ F
Sbjct: 66  RRIKISLSENGSHLRQASRNTGRKVLLWTRRGSPIRALFVISVGTITLLTLTGLLVFMLF 125

Query: 124 FLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIA 183
           FLAAT+NAIIISLLVSLAA GGFLALFFAC+TAIY+GAL VA FVIS ATISAIVAV++A
Sbjct: 126 FLAATINAIIISLLVSLAAAGGFLALFFACLTAIYIGALSVAAFVISAATISAIVAVLVA 185

Query: 184 AGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAH 221
           +GWIGFFC++ LA +KS GLAK  +S + SA+S +S+AR AH
Sbjct: 186 SGWIGFFCVILLATKKSVGLAKHFLSMTGSALSTYSHARVAH 226

[Close]

BLAST of Csa5G427940 vs. NCBI nr
Match: gi|595939790|ref|XP_007215780.1| (hypothetical protein PRUPE_ppa009705mg [Prunus persica])

HSP 1 Score: 243.8 bits (621), Expect = 2.8e-61
Identity = 134/225 (59.56%), Postives = 162/225 (72.00%), Query Frame = 1


Query: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGS---- 60
           MAE + +   N  V V+  D     +K    E+ T++    RLI  IFFP          
Sbjct: 57  MAEPYGT---NGAVDVDVTDDGEINTKATHREE-TLFGVFHRLIDAIFFPGSTSAGTAAP 116

Query: 61  LFHRVKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVGTIVLLAMTGSLIFL 120
           LF R+K S+ +N P + +A RN GR+VL WTRRGSPLRALLVISVGTI L+++TG L+F+
Sbjct: 117 LFRRIKNSLAENCPLLREASRNSGRNVLLWTRRGSPLRALLVISVGTITLISLTGLLVFM 176

Query: 121 FFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVV 180
            FFLAATLNA+IISLL+SLAA GGFLALFFACVTAIY+GAL VA+FVIS  TISAI AV+
Sbjct: 177 LFFLAATLNAVIISLLLSLAAAGGFLALFFACVTAIYIGALSVAVFVISATTISAIAAVL 236

Query: 181 IAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHK 222
           I  GWIGFF +VWLA +KS GLAK+S S + SAISA+SY R AHK
Sbjct: 237 ITTGWIGFFWIVWLAAKKSLGLAKQSFSVTGSAISAYSYGRHAHK 277

The following BLAST results are available for this feature:

BLAST of Csa5G427940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNC3_CUCSA	3.3e-117	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G427940 PE=4 SV=1	[more]
V4SA05_9ROSI	1.2e-63	61.14	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029179mg PE=4 SV=1	[more]
M5WTH6_PRUPE	2.0e-61	59.56	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009705mg PE=4 SV=1	[more]
W9S3F9_9ROSA	3.4e-61	59.52	Uncharacterized protein OS=Morus notabilis GN=L484_007805 PE=4 SV=1	[more]
A0A067KI39_JATCU	4.4e-61	62.19	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10524 PE=4 SV=1	[more]

BLAST of Csa5G427940 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16550.1	3.0e-53	56.25	unknown protein	[more]

BLAST of Csa5G427940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445067\|ref\|XP_004140295.1\|	4.7e-117	100.00	PREDICTED: uncharacterized protein LOC101212066 [Cucumis sativus]	[more]
gi\|659126433\|ref\|XP_008463179.1\|	4.7e-109	95.05	PREDICTED: uncharacterized protein LOC103501388 [Cucumis melo]	[more]
gi\|567862776\|ref\|XP_006424042.1\|	1.8e-63	61.14	hypothetical protein CICLE_v10029179mg [Citrus clementina]	[more]
gi\|568869206\|ref\|XP_006487819.1\|	2.3e-63	59.46	PREDICTED: uncharacterized protein LOC102620494 [Citrus sinensis]	[more]
gi\|595939790\|ref\|XP_007215780.1\|	2.8e-61	59.56	hypothetical protein PRUPE_ppa009705mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU104731	cucumber EST collection version 3.0	transcribed_cluster
CU113630	cucumber EST collection version 3.0	transcribed_cluster
CU149848	cucumber EST collection version 3.0	transcribed_cluster
CU168927	cucumber EST collection version 3.0	transcribed_cluster
CU174462	cucumber EST collection version 3.0	transcribed_cluster
CU176271	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G427940.1	Csa5G427940.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU113630	CU113630	transcribed_cluster
CU104731	CU104731	transcribed_cluster
CU176271	CU176271	transcribed_cluster
CU149848	CU149848	transcribed_cluster
CU174462	CU174462	transcribed_cluster
CU168927	CU168927	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35508	FAMILY NOT NAMED	coord: 16..222 score: 3.1
None	No IPR available	PANTHER	PTHR35508:SF1	SUBFAMILY NOT NAMED	coord: 16..222 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G427940	Cla009149	Watermelon (97103) v1	cuwmB417
Csa5G427940	MELO3C025122	Melon (DHL92) v3.5.1	cumeB353
Csa5G427940	ClCG01G008740	Watermelon (Charleston Gray)	cuwcgB373
Csa5G427940	Lsi09G009130	Bottle gourd (USVL1VR-Ls)	culsiB330
Csa5G427940	MELO3C025122.2	Melon (DHL92) v3.6.1	cumedB330
Csa5G427940	Cla97C01G008970	Watermelon (97103) v2	cuwmbB345
Csa5G427940	Bhi12G001053	Wax gourd	cuwgoB452
Csa5G427940	CSPI05G15240	Wild cucumber (PI 183967)	cpicuB239
Csa5G427940	Cucsa.001330	Cucumber (Gy14) v1	cgycuB385
Csa5G427940	CmaCh04G022840	Cucurbita maxima (Rimu)	cmacuB750
Csa5G427940	CmaCh15G007520	Cucurbita maxima (Rimu)	cmacuB293
Csa5G427940	CmoCh15G007770	Cucurbita moschata (Rifu)	cmocuB280
Csa5G427940	CmoCh04G023880	Cucurbita moschata (Rifu)	cmocuB740
Csa5G427940	Cp4.1LG01g19840	Cucurbita pepo (Zucchini)	cpecuB441
Csa5G427940	Cp4.1LG13g05380	Cucurbita pepo (Zucchini)	cpecuB187
Csa5G427940	CsGy5G015060	Cucumber (Gy14) v2	cgybcuB223
Csa5G427940	Carg18278	Silver-seed gourd	carcuB0556
Csa5G427940	Carg01454	Silver-seed gourd	carcuB0845

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None