CmoCh04G023880 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G023880
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transmembrane protein, putative
Location	Cmo_Chr04 : 17793347 .. 17797026 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGAAGTACGATTCCGATGATCGGAATGGCACCGTGCCGGTTGACGAACAAGATAGAACCAGTCACAAGTCCAAAGGAGTGTATAATATGGATCGGACAGTTTATGAAACCCTCCGCCGTCTGATCGCTGAGGTTTTCTCCCCCGATAAAGCTAAGGGTTCTTCATTGTTCCAGCGCGTTAAGGTCTCCATCACTGAGAATGGCCCTGCCGTTGAAAAGGCCTGCAGAAACATTGGTCGCGATGTTCTTTGCTGGACTCGCAGGGGCAGTCCTCTTAGAGCACTCCTTGTTATCTCCGTGAGTATTACTGATAATTCCAAAACTGGTGGTTGTCTGGACTTGTTTATTGTGTTTGAAATGCTTTCTGTTCAGTACTTAATGGTTAGATGGACTGTTGGAGATTTTGATTTTATCGCTTAAATGGTATTATCTCTGTTGTTTTTTGGTTCTTGTTTAATGGCAACGATTGATCTGGGCAGGATTTGTTGTTAGTAGGAATTTTTTTTCCTTAATAATGTATATTGTTTAACAATTTGATCAATGGCAAGTGCGGTGAGAGCTCGAGTGGTGGTGTTTTTGACGATCGGAGAAAATAATTTGCTGAGGTAATTTCCTCTTGTTTTGACCCATTTGCCAATGTTTTCAGCCTTCTTTCTTTTTGTAAACTCATTTTCAGCCACCATCTTCTGCTGTTTGGTCTTGTGGAGGGAGTTGATTTCTTCTTCCATGGCCATACGTTGCATTGGACCTGTAAGACTGGAGTGCTACTTAGGTGTTTCACTAATTCCCAATTGTCTTTGCCCTTGTTAATGGATGAGCAACCTTCTGAAGATGTAGCCCATTTTTCTATCCATTCCATAAACCATGGAGGGTATTGACTATATGAATTGAGTGAAGATTCTTGACTTCGTTCAAGTATTTGCTATCCTTTAGACTTTTTCTTTTCTTGTTTCATCTTGAATAGACAATATGTTCTTTTTGATGTCTAGTTTCTTGAGTTTTATTGTTTGGTTTCCCTGTTGTTGTTAAGACCTATCAACTATGTAAAATTCGAGCGGTTTTGTTTGAGATTGTTTTGGGGCCAGGCTCCTTTGCGTACAGCTCTTAGGAGCTTTGATTTCGATACTAGTGCTTGGTTCCAAAGATGGTGACAGGAAAAATGGAATTTTTTATTCATGAGAGAATAATATATTTAACCCTTTTAGTTTAGATGCATAGCCTAGAAGGATATACCTAATAGCCCAAGGGTCAAGTTTACTTCTTCTAGGAGAGTGATTATTGAAAAGATTTAACCCTTTTGTTTTAGGGGTACTCTCATGGATGGAGAAGATACGTGAAAGATTTTAAAATTGATAGATTCCGTATGGAGTTCTCTAAAGTTCTTTGTGATTTTGACTCATTTTTTATTTGTGCCAATTGTAAGAGTTGTTTGTACCCTTTTGGCATTGTTATGGGTCGTTGATATCTCACCTCCCCATCTCTGAGGATTCTGTTAATGAAAAATTTTCTATCTAAAAAAAATTATAAATGATGAGAAATTGATAGACATTTTACTAACAATGGAAAGAAAAAGTTCTGGCTCTTGAGGTTCGACTCAAGGAGGGTGCAACTGTTGGAAAGATATATATAACAAAAGTCGAGGGTACCAAATAGGTTTGATACTGATGAACGATGTGTACTGTAGCGTAGGTCCTCTGACTGCTCTTATCTGTTTTCTATCTGTTGCAAGATTTTTGTTGTAATAGTCCTCTCTATCTTTCAGACACAGACAAACTGAAGTCTTTTTATGTTCTCACCAGCTCCCTTCTTATTAGTAGTTACTTACATTTGGAATTGCTGCAGGTTGGGACAATTGCTCTTCTTGCATTGACGGGATTGCTCATCTTTCTGCTATTCTTTCTGGCAGCAACTTTCAACGCCGTTGTTATTTCTCTTCTTGTTTCCTTGGCTGCAGTTGGAGGCTTCTTGGCACTTTTCTTTGCTTGCATAACGGCTGTTTACATCGGAGCATTAACAGTTGCTTTGTTTGTTATATCCACTGCAACAATCTCAGCAATTGTGGCAGTGGTGATTGCCGCAGGTAGCAATAATATCTACTCTTATCTAAGCCACGTTTCTCTAAAACCTCTTAACCTGTTGATATGAATGTGTACATGTTGGTTTGACATGGTTCGGTCTCCTCTTAAGGAATAACATGTGCATCAGTTTGCAGCTTTCTAGCTATATGCTTCTGCTTTCTCTTTCGTTGGGGTTCTCTACCACGATTTGAATTGTTTTCTGAATCATTTGTGTGCATTTAGCTTATGGGTATGGACGAAAATGTTAGGAACCACGAATCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCCCTCGTGGCTTTTCTTTTGGTTTTTCCAAACGGCCTCATACCAATGGAGATAGTATTCATTATTTATAAACTCATCGATCAACCCTTTAATTAGTCGATGTGGGACTCTTCTCCCAACGATTCTCAACAATCCTCCCCTCGAACAAAGTACACCATAGAGTCTACCCTGAGGCCTATGAAGCCCTCAAACAGCCTCCCTTTAATCGAGGCTCGACTCCTTCTCTGGAGCCCTGGAACAAAGTACACGTTTTGTTCGACACTTGAGTTACTTTTGTCTACACCTTCGAGGCTCACAACTTCTTTGTTAAACATTTGAAGATTCAATTAGTATGACTAAGTTAAGGACATGACTCTGATACTATGATAGGAACCACGAATCGCCACAATGGTATGATATTGTCCATTTTGAGCATAAGCTCTGATGGCTTTTCTTTTGGTTTCTCCAAAAGGCCTCATACCAATAGAGATAGTATTCCTTATTTATAAACCCATGATCAACCCTTTAATTAGCCGATGTGAGACTCCTCTCTCAACAATTCTCAACAGGAAATGTTGTAAGCTACTGATTGAACTAGCGGATCGAGAGAAGTTTTGCTTCGCTTTCATTTAGACAAAGCCATATACTAGTCAATGACTTCCCATTGATTTTGTTTGTCTTCATGAGAGTAGACCTTGTGTCAATTGTGCACTATTGGAATTTCCGTACTTCAATTCTTTCTTTGCTCTAACATCTTGCATCTTCCAAATTCAGGTTGGATTGGATTCTTCTGTGTGGTATGGCTAGCAATGCGAAAAAGTTTTGGTATTGCTAAGCAGTCGATGAGCGCGGGCAGTTCAGCAATTTCAGCATTTTCTCATGCTAGACGTGCCCACAAAGATTAGGTATGTTTTTAGATGAGTTAAGTGAATGCTTTGAACTGGTGTATGTTATTGCTTCACACGTGTTTTCCCCTATTGAGAGTTACGTTTTGGAGGATCTGCTGCATATGTTGTGTTGACTTTGAAGTTGTTCTAGGTAGTGAAACCATAACATGTATTTGTAATGTAAATATTCTGTTAAATGTGTTGAGTCATACAATATAGTCCTACTATTTTATGGGTTCCTTTATTGGTGATGAAAGTATCTAGATTGAAGATAGAACTTCCCAGAACTGTCATAATCTAAGTAATATTTTGGCTTTAAGTTACTGCTATGTACTGTAATTGTGAAAATTTACAAGGATTTAAATTTGAAGTGTTCAATGAGGTGATGACTGATTGAATGAATTTGGATTTATGAAGTTCAAGGTTAGAAACAT

mRNA sequence

ATGGCGGAGAAGTACGATTCCGATGATCGGAATGGCACCGTGCCGGTTGACGAACAAGATAGAACCAGTCACAAGTCCAAAGGAGTGTATAATATGGATCGGACAGTTTATGAAACCCTCCGCCGTCTGATCGCTGAGGTTTTCTCCCCCGATAAAGCTAAGGGTTCTTCATTGTTCCAGCGCGTTAAGGTCTCCATCACTGAGAATGGCCCTGCCGTTGAAAAGGCCTGCAGAAACATTGGTCGCGATGTTCTTTGCTGGACTCGCAGGGGCAGTCCTCTTAGAGCACTCCTTGTTATCTCCGTGAGTATTACTGATAATTCCAAAACTGGTGGTTGTCTGGACTTGTTTATTGTGTTTGAAATGCTTTCTGTTCAGTACTTAATGGTTGGGACAATTGCTCTTCTTGCATTGACGGGATTGCTCATCTTTCTGCTATTCTTTCTGGCAGCAACTTTCAACGCCGTTGTTATTTCTCTTCTTGTTTCCTTGGCTGCAGTTGGAGGCTTCTTGGCACTTTTCTTTGCTTGCATAACGGCTGTTTACATCGGAGCATTAACAGTTGCTTTGTTTGTTATATCCACTGCAACAATCTCAGCAATTGTGGCAGTGGTGATTGCCGCAGGTTGGATTGGATTCTTCTGTGTGGTATGGCTAGCAATGCGAAAAAGTTTTGGTATTGCTAAGCAGTCGATGAGCGCGGGCAGTTCAGCAATTTCAGCATTTTCTCATGCTAGACGTGCCCACAAAGATTAGGTATGTTTTTAGATGAGTTAAGTGAATGCTTTGAACTGGTGTATGTTATTGCTTCACACGTGTTTTCCCCTATTGAGAGTTACGTTTTGGAGGATCTGCTGCATATGTTGTGTTGACTTTGAAGTTGTTCTAGGTAGTGAAACCATAACATGTATTTGTAATGTAAATATTCTGTTAAATGTGTTGAGTCATACAATATAGTCCTACTATTTTATGGGTTCCTTTATTGGTGATGAAAGTATCTAGATTGAAGATAGAACTTCCCAGAACTGTCATAATCTAAGTAATATTTTGGCTTTAAGTTACTGCTATGTACTGTAATTGTGAAAATTTACAAGGATTTAAATTTGAAGTGTTCAATGAGGTGATGACTGATTGAATGAATTTGGATTTATGAAGTTCAAGGTTAGAAACAT

Coding sequence (CDS)

ATGGCGGAGAAGTACGATTCCGATGATCGGAATGGCACCGTGCCGGTTGACGAACAAGATAGAACCAGTCACAAGTCCAAAGGAGTGTATAATATGGATCGGACAGTTTATGAAACCCTCCGCCGTCTGATCGCTGAGGTTTTCTCCCCCGATAAAGCTAAGGGTTCTTCATTGTTCCAGCGCGTTAAGGTCTCCATCACTGAGAATGGCCCTGCCGTTGAAAAGGCCTGCAGAAACATTGGTCGCGATGTTCTTTGCTGGACTCGCAGGGGCAGTCCTCTTAGAGCACTCCTTGTTATCTCCGTGAGTATTACTGATAATTCCAAAACTGGTGGTTGTCTGGACTTGTTTATTGTGTTTGAAATGCTTTCTGTTCAGTACTTAATGGTTGGGACAATTGCTCTTCTTGCATTGACGGGATTGCTCATCTTTCTGCTATTCTTTCTGGCAGCAACTTTCAACGCCGTTGTTATTTCTCTTCTTGTTTCCTTGGCTGCAGTTGGAGGCTTCTTGGCACTTTTCTTTGCTTGCATAACGGCTGTTTACATCGGAGCATTAACAGTTGCTTTGTTTGTTATATCCACTGCAACAATCTCAGCAATTGTGGCAGTGGTGATTGCCGCAGGTTGGATTGGATTCTTCTGTGTGGTATGGCTAGCAATGCGAAAAAGTTTTGGTATTGCTAAGCAGTCGATGAGCGCGGGCAGTTCAGCAATTTCAGCATTTTCTCATGCTAGACGTGCCCACAAAGATTAG

Homology

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BLAST of CmoCh04G023880 vs. TrEMBL
Match: A0A0A0KNC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G427940 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 9.5e-81
Identity = 179/251 (71.31%), Postives = 203/251 (80.88%), Query Frame = 1


Query: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60
           MAE +DSDDRN TVPV+E+D +SH+SKGV   D+TVYE LRRLIAE+F PD+ KGS LF 
Sbjct: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGS-LFH 60

Query: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVF 120
           RVKVS+T+NGPAV +ACRN GRDVL WTRRGSPLRALLVISV                  
Sbjct: 61  RVKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISV------------------ 120

Query: 121 EMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180
                     GTI LLA+TG LIFL FFLAAT NA++ISLLVSLAAVGGFLALFFAC+TA
Sbjct: 121 ----------GTIVLLAMTGSLIFLFFFLAATLNAIIISLLVSLAAVGGFLALFFACVTA 180

Query: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS 240
           +Y+GAL VALFVISTATISAIVAVVIAAGWIGFFC+VWLA+RKSFG+AK+S+SA +SAIS
Sbjct: 181 IYVGALGVALFVISTATISAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAIS 222

Query: 241 AFSHARRAHKD 252
           AFS+ARRAHKD
Sbjct: 241 AFSYARRAHKD 222

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BLAST of CmoCh04G023880 vs. TrEMBL
Match: V4SA05_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029179mg PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-52
Identity = 135/253 (53.36%), Postives = 167/253 (66.01%), Query Frame = 1


Query: 5   YDSDDRNGT-----VPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPD---KAKGS 64
           Y+SD  NG      VPVD+ D T  K KG+   D T+Y  + R+   +  PD   +    
Sbjct: 7   YESDGLNGVGVGVGVPVDDDDATK-KYKGIPCDDETLYGVIHRMFTMILFPDSNSRVASF 66

Query: 65  SLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDL 124
           SL +R+K+S++ENG  + +A RN GR VL WTRRGSP+RAL VISV              
Sbjct: 67  SLLRRIKISLSENGSHLRQASRNTGRKVLLWTRRGSPIRALFVISV-------------- 126

Query: 125 FIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFA 184
                         GTI LL LTGLL+F+LFFLAAT NA++ISLLVSLAA GGFLALFFA
Sbjct: 127 --------------GTITLLTLTGLLVFMLFFLAATINAIIISLLVSLAAAGGFLALFFA 186

Query: 185 CITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGS 244
           C+TA+YIGAL+VA FVIS AT+SAIVAV+IA+GWIGFFCV+WLA +KS G+AK  +    
Sbjct: 187 CLTAIYIGALSVAAFVISAATVSAIVAVLIASGWIGFFCVIWLATKKSVGLAKHFLGMTG 230

Query: 245 SAISAFSHARRAH 250
           SA+S +S AR AH
Sbjct: 247 SALSTYSRARVAH 230

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BLAST of CmoCh04G023880 vs. TrEMBL
Match: A0A067KI39_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10524 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.2e-52
Identity = 131/232 (56.47%), Postives = 157/232 (67.67%), Query Frame = 1


Query: 25  KSKGVYNMDRTVYETLRRLIAEVFSPDKAKG---SSLFQRVKVSITENGPAVEKACRNIG 84
           + KGV+  D T+Y  L  L+A +F P+        S  QR+K+S++ENGP ++ A +N G
Sbjct: 19  EKKGVHRKDETLYSVLHSLLAMIFVPESGSSVAAESFLQRIKISVSENGPLLKDATKNTG 78

Query: 85  RDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGL 144
           R VL WTRRGSPLRALLVISV                            GTI LL LTGL
Sbjct: 79  RKVLLWTRRGSPLRALLVISV----------------------------GTITLLTLTGL 138

Query: 145 LIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAI 204
           L+F+LFFLAAT NA+V+SLL+SLAA GGFLALFFAC+TAVYIGAL+VALFVIST  ISAI
Sbjct: 139 LVFMLFFLAATVNAIVVSLLISLAAAGGFLALFFACVTAVYIGALSVALFVISTTAISAI 198

Query: 205 VAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFS---HARRAHK 251
           VAV+IA GWIGFF  VWL  +KS G+AK S+S   SAISA+S   H RR H+
Sbjct: 199 VAVLIATGWIGFFWTVWLVTKKSVGVAKHSLSMTGSAISAYSSARHLRRYHE 222

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BLAST of CmoCh04G023880 vs. TrEMBL
Match: M5WTH6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009705mg PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 4.6e-51
Identity = 135/253 (53.36%), Postives = 165/253 (65.22%), Query Frame = 1


Query: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSS--- 60
           MAE Y +   NG V VD  D     +K  +  + T++    RLI  +F P      +   
Sbjct: 57  MAEPYGT---NGAVDVDVTDDGEINTKATHR-EETLFGVFHRLIDAIFFPGSTSAGTAAP 116

Query: 61  LFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLF 120
           LF+R+K S+ EN P + +A RN GR+VL WTRRGSPLRALLVISV               
Sbjct: 117 LFRRIKNSLAENCPLLREASRNSGRNVLLWTRRGSPLRALLVISV--------------- 176

Query: 121 IVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFAC 180
                        GTI L++LTGLL+F+LFFLAAT NAV+ISLL+SLAA GGFLALFFAC
Sbjct: 177 -------------GTITLISLTGLLVFMLFFLAATLNAVIISLLLSLAAAGGFLALFFAC 236

Query: 181 ITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSS 240
           +TA+YIGAL+VA+FVIS  TISAI AV+I  GWIGFF +VWLA +KS G+AKQS S   S
Sbjct: 237 VTAIYIGALSVAVFVISATTISAIAAVLITTGWIGFFWIVWLAAKKSLGLAKQSFSVTGS 277

Query: 241 AISAFSHARRAHK 251
           AISA+S+ R AHK
Sbjct: 297 AISAYSYGRHAHK 277

[Close]

BLAST of CmoCh04G023880 vs. TrEMBL
Match: W9S3F9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007805 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.8e-50
Identity = 123/221 (55.66%), Postives = 154/221 (69.68%), Query Frame = 1


Query: 33  DRTVYETLRRLIAEVFSPDKA---KGSSLFQRVKVSITENGPAVEKACRNIGRDVLCWTR 92
           D T+   + RLI+E+  PD +    G+ L QR+K S+ ENGP + +A RN   +VL WTR
Sbjct: 18  DETLNGVVHRLISEILFPDASGDTAGAPLLQRIKTSVAENGPLLPEASRNTASNVLLWTR 77

Query: 93  RGSPLRALLVISVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFL 152
           RGSPLRALLVISV                            GTI LLALTGLL+F++FFL
Sbjct: 78  RGSPLRALLVISV----------------------------GTITLLALTGLLVFMVFFL 137

Query: 153 AATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAG 212
            ATFNA+V+SLL+SLAA GGFLALFFAC+TA+YIGAL++A FVIST  I+ I+AV+IAAG
Sbjct: 138 VATFNAIVVSLLISLAAAGGFLALFFACVTAIYIGALSIAAFVISTTAITTIIAVLIAAG 197

Query: 213 WIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHK 251
           WIGFFC VWL ++KS G+AK S+S  SSA+SA+S AR  H+
Sbjct: 198 WIGFFCTVWLVIKKSLGLAKHSLSMTSSALSAYSTARHTHQ 210

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BLAST of CmoCh04G023880 vs. TAIR10
Match: AT5G16550.1 (AT5G16550.1 unknown protein)

HSP 1 Score: 168.3 bits (425), Expect = 6.0e-42
Identity = 107/220 (48.64%), Postives = 139/220 (63.18%), Query Frame = 1


Query: 34  RTVYETLRRLIAEVFSPDKAKG--SSLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRG 93
           +++Y  +   I  +  PD   G  SS  +RV+ S+ ENGP + +A    GR++L WTRRG
Sbjct: 49  KSLYSLICLTIGSILFPDSKTGDASSFLERVRNSVAENGPKLREASERTGREILLWTRRG 108

Query: 94  SPLRALLVISVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAA 153
           S LRALLVI++                            GTI LL    L++F LFF+AA
Sbjct: 109 SSLRALLVITM----------------------------GTIVLLTTMALVVFTLFFVAA 168

Query: 154 TFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAIVAVVIAAGWI 213
           T NA++ISLL+SLA  GGFLALFF C+T VYIGAL+VA FVISTAT+SA+V+V+IA+GWI
Sbjct: 169 TANAIIISLLISLAVAGGFLALFFLCLTGVYIGALSVAAFVISTATVSAVVSVLIASGWI 228

Query: 214 GFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD 252
           GFF  VWL  R S  +AKQS+S   SAIS  + +R  H+D
Sbjct: 229 GFFYAVWLGTRGSLRLAKQSVSVVGSAISGNTISRHQHQD 240

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BLAST of CmoCh04G023880 vs. NCBI nr
Match: gi|449445067|ref|XP_004140295.1| (PREDICTED: uncharacterized protein LOC101212066 [Cucumis sativus])

HSP 1 Score: 308.1 bits (788), Expect = 1.4e-80
Identity = 179/251 (71.31%), Postives = 203/251 (80.88%), Query Frame = 1


Query: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60
           MAE +DSDDRN TVPV+E+D +SH+SKGV   D+TVYE LRRLIAE+F PD+ KGS LF 
Sbjct: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGS-LFH 60

Query: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVF 120
           RVKVS+T+NGPAV +ACRN GRDVL WTRRGSPLRALLVISV                  
Sbjct: 61  RVKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISV------------------ 120

Query: 121 EMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180
                     GTI LLA+TG LIFL FFLAAT NA++ISLLVSLAAVGGFLALFFAC+TA
Sbjct: 121 ----------GTIVLLAMTGSLIFLFFFLAATLNAIIISLLVSLAAVGGFLALFFACVTA 180

Query: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS 240
           +Y+GAL VALFVISTATISAIVAVVIAAGWIGFFC+VWLA+RKSFG+AK+S+SA +SAIS
Sbjct: 181 IYVGALGVALFVISTATISAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAIS 222

Query: 241 AFSHARRAHKD 252
           AFS+ARRAHKD
Sbjct: 241 AFSYARRAHKD 222

[Close]

BLAST of CmoCh04G023880 vs. NCBI nr
Match: gi|659126433|ref|XP_008463179.1| (PREDICTED: uncharacterized protein LOC103501388 [Cucumis melo])

HSP 1 Score: 292.4 bits (747), Expect = 7.8e-76
Identity = 174/251 (69.32%), Postives = 199/251 (79.28%), Query Frame = 1


Query: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60
           MAE +DSD RN TVPV+E+D +SH+SKG+   D+TVYE LRRLIAE+F PD+ KGS LF 
Sbjct: 1   MAEAHDSDARNTTVPVEEEDASSHQSKGLSIDDQTVYEPLRRLIAEIFFPDEIKGS-LFH 60

Query: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVF 120
           RVKVS+ +NGPAV +ACRN G DVL WTRRGSPLRALLVISV                  
Sbjct: 61  RVKVSVADNGPAVGQACRNFGHDVLSWTRRGSPLRALLVISV------------------ 120

Query: 121 EMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 180
                     GTI LLA+TG LIFLLFFLAAT NA++ISLLVSLAAVGGFLALFFAC+TA
Sbjct: 121 ----------GTIVLLAMTGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTA 180

Query: 181 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS 240
           +Y+GAL VALFVISTATISAIVAVVIAAGWIGFF +VWLA+ KSFG+AK+S+SA +SAIS
Sbjct: 181 IYVGALGVALFVISTATISAIVAVVIAAGWIGFFFMVWLAICKSFGLAKRSVSASNSAIS 222

Query: 241 AFSHARRAHKD 252
           AFS+ARRAHKD
Sbjct: 241 AFSYARRAHKD 222

[Close]

BLAST of CmoCh04G023880 vs. NCBI nr
Match: gi|568869206|ref|XP_006487819.1| (PREDICTED: uncharacterized protein LOC102620494 [Citrus sinensis])

HSP 1 Score: 216.1 bits (549), Expect = 7.1e-53
Identity = 136/249 (54.62%), Postives = 168/249 (67.47%), Query Frame = 1


Query: 5   YDSDDRNGT-VPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPD---KAKGSSLFQ 64
           Y+SD  NG  VPVD+ D T  K KG+   D T+Y  + R+   +  PD   +    SL +
Sbjct: 7   YESDGLNGVGVPVDDDDATK-KYKGIPCDDETLYGVIHRMFTMILFPDSNSRVASFSLLR 66

Query: 65  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVF 124
           R+K+S++ENG  + +A RN GR VL WTRRGSP+RAL VISV                  
Sbjct: 67  RIKISLSENGSHLRQASRNTGRKVLLWTRRGSPIRALFVISV------------------ 126

Query: 125 EMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITA 184
                     GTI LL LTGLL+F+LFFLAAT NA++ISLLVSLAA GGFLALFFAC+TA
Sbjct: 127 ----------GTITLLTLTGLLVFMLFFLAATINAIIISLLVSLAAAGGFLALFFACLTA 186

Query: 185 VYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAIS 244
           +YIGAL+VA FVIS ATISAIVAV++A+GWIGFFCV+ LA +KS G+AK  +S   SA+S
Sbjct: 187 IYIGALSVAAFVISAATISAIVAVLVASGWIGFFCVILLATKKSVGLAKHFLSMTGSALS 226

Query: 245 AFSHARRAH 250
            +SHAR AH
Sbjct: 247 TYSHARVAH 226

[Close]

BLAST of CmoCh04G023880 vs. NCBI nr
Match: gi|567862776|ref|XP_006424042.1| (hypothetical protein CICLE_v10029179mg [Citrus clementina])

HSP 1 Score: 214.9 bits (546), Expect = 1.6e-52
Identity = 135/253 (53.36%), Postives = 167/253 (66.01%), Query Frame = 1


Query: 5   YDSDDRNGT-----VPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPD---KAKGS 64
           Y+SD  NG      VPVD+ D T  K KG+   D T+Y  + R+   +  PD   +    
Sbjct: 7   YESDGLNGVGVGVGVPVDDDDATK-KYKGIPCDDETLYGVIHRMFTMILFPDSNSRVASF 66

Query: 65  SLFQRVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDL 124
           SL +R+K+S++ENG  + +A RN GR VL WTRRGSP+RAL VISV              
Sbjct: 67  SLLRRIKISLSENGSHLRQASRNTGRKVLLWTRRGSPIRALFVISV-------------- 126

Query: 125 FIVFEMLSVQYLMVGTIALLALTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFA 184
                         GTI LL LTGLL+F+LFFLAAT NA++ISLLVSLAA GGFLALFFA
Sbjct: 127 --------------GTITLLTLTGLLVFMLFFLAATINAIIISLLVSLAAAGGFLALFFA 186

Query: 185 CITAVYIGALTVALFVISTATISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGS 244
           C+TA+YIGAL+VA FVIS AT+SAIVAV+IA+GWIGFFCV+WLA +KS G+AK  +    
Sbjct: 187 CLTAIYIGALSVAAFVISAATVSAIVAVLIASGWIGFFCVIWLATKKSVGLAKHFLGMTG 230

Query: 245 SAISAFSHARRAH 250
           SA+S +S AR AH
Sbjct: 247 SALSTYSRARVAH 230

[Close]

BLAST of CmoCh04G023880 vs. NCBI nr
Match: gi|802614637|ref|XP_012074754.1| (PREDICTED: uncharacterized protein LOC105636167 [Jatropha curcas])

HSP 1 Score: 213.0 bits (541), Expect = 6.0e-52
Identity = 131/232 (56.47%), Postives = 157/232 (67.67%), Query Frame = 1


Query: 25  KSKGVYNMDRTVYETLRRLIAEVFSPDKAKG---SSLFQRVKVSITENGPAVEKACRNIG 84
           + KGV+  D T+Y  L  L+A +F P+        S  QR+K+S++ENGP ++ A +N G
Sbjct: 19  EKKGVHRKDETLYSVLHSLLAMIFVPESGSSVAAESFLQRIKISVSENGPLLKDATKNTG 78

Query: 85  RDVLCWTRRGSPLRALLVISVSITDNSKTGGCLDLFIVFEMLSVQYLMVGTIALLALTGL 144
           R VL WTRRGSPLRALLVISV                            GTI LL LTGL
Sbjct: 79  RKVLLWTRRGSPLRALLVISV----------------------------GTITLLTLTGL 138

Query: 145 LIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTATISAI 204
           L+F+LFFLAAT NA+V+SLL+SLAA GGFLALFFAC+TAVYIGAL+VALFVIST  ISAI
Sbjct: 139 LVFMLFFLAATVNAIVVSLLISLAAAGGFLALFFACVTAVYIGALSVALFVISTTAISAI 198

Query: 205 VAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFS---HARRAHK 251
           VAV+IA GWIGFF  VWL  +KS G+AK S+S   SAISA+S   H RR H+
Sbjct: 199 VAVLIATGWIGFFWTVWLVTKKSVGVAKHSLSMTGSAISAYSSARHLRRYHE 222

The following BLAST results are available for this feature:

BLAST of CmoCh04G023880 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G023880 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNC3_CUCSA	9.5e-81	71.31	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G427940 PE=4 SV=1	[more]
V4SA05_9ROSI	1.1e-52	53.36	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029179mg PE=4 SV=1	[more]
A0A067KI39_JATCU	4.2e-52	56.47	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10524 PE=4 SV=1	[more]
M5WTH6_PRUPE	4.6e-51	53.36	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009705mg PE=4 SV=1	[more]
W9S3F9_9ROSA	1.8e-50	55.66	Uncharacterized protein OS=Morus notabilis GN=L484_007805 PE=4 SV=1	[more]

BLAST of CmoCh04G023880 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16550.1	6.0e-42	48.64	unknown protein	[more]

BLAST of CmoCh04G023880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445067\|ref\|XP_004140295.1\|	1.4e-80	71.31	PREDICTED: uncharacterized protein LOC101212066 [Cucumis sativus]	[more]
gi\|659126433\|ref\|XP_008463179.1\|	7.8e-76	69.32	PREDICTED: uncharacterized protein LOC103501388 [Cucumis melo]	[more]
gi\|568869206\|ref\|XP_006487819.1\|	7.1e-53	54.62	PREDICTED: uncharacterized protein LOC102620494 [Citrus sinensis]	[more]
gi\|567862776\|ref\|XP_006424042.1\|	1.6e-52	53.36	hypothetical protein CICLE_v10029179mg [Citrus clementina]	[more]
gi\|802614637\|ref\|XP_012074754.1\|	6.0e-52	56.47	PREDICTED: uncharacterized protein LOC105636167 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G023880.1	CmoCh04G023880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35508	FAMILY NOT NAMED	coord: 130..251 score: 7.7E-80coord: 1..101 score: 7.7
None	No IPR available	PANTHER	PTHR35508:SF1	SUBFAMILY NOT NAMED	coord: 1..101 score: 7.7E-80coord: 130..251 score: 7.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G023880	Cucsa.001330	Cucumber (Gy14) v1	cgycmoB0740
CmoCh04G023880	CmaCh15G007520	Cucurbita maxima (Rimu)	cmacmoB309
CmoCh04G023880	CmaCh04G022840	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G023880	Cla009149	Watermelon (97103) v1	cmowmB707
CmoCh04G023880	Csa5G427940	Cucumber (Chinese Long) v2	cmocuB740
CmoCh04G023880	MELO3C025122	Melon (DHL92) v3.5.1	cmomeB626
CmoCh04G023880	ClCG01G008740	Watermelon (Charleston Gray)	cmowcgB636
CmoCh04G023880	CSPI05G15240	Wild cucumber (PI 183967)	cmocpiB749
CmoCh04G023880	Lsi09G009130	Bottle gourd (USVL1VR-Ls)	cmolsiB610
CmoCh04G023880	Cp4.1LG13g05380	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G023880	Cp4.1LG01g19840	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G023880	MELO3C025122.2	Melon (DHL92) v3.6.1	cmomedB715
CmoCh04G023880	CsaV3_5G024270	Cucumber (Chinese Long) v3	cmocucB0876
CmoCh04G023880	Cla97C01G008970	Watermelon (97103) v2	cmowmbB676
CmoCh04G023880	Bhi12G001053	Wax gourd	cmowgoB0822
CmoCh04G023880	CsGy5G015060	Cucumber (Gy14) v2	cgybcmoB654
CmoCh04G023880	Carg01454	Silver-seed gourd	carcmoB1121
CmoCh04G023880	Carg18278	Silver-seed gourd	carcmoB0716

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G023880	CmoCh15G007770	Cucurbita moschata (Rifu)	cmocmoB262

The following block(s) are covering this gene:

None