CsGy5G015060 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G015060
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Voltage-dependent L-type calcium channel subunit alpha-1F
Location	Chr5 : 20956400 .. 20961081 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAGCGCACGACTCCGATGATCGGAATACCACCGTGCCGGTTGAGGAAGAAGATGCATCCAGTCATCAATCCAAAGGAGTGTGTACGGAGGATCAGACCGTTTATGAACCTCTCCGCCGTCTGATCGCTGAGATTTTCTTTCCCGATGAAATTAAGGGTTCTTTGTTTCATCGCGTCAAGGTCTCTGTCACTGATAATGGCCCTGCCGTTGCACAAGCTTGCAGAAACTTTGGTCGCGACGTTCTTTCTTGGACTCGTAGGGGCAGTCCTCTGCGAGCGCTCCTTGTTATCTCTGTGAGTATTGCCGATAATTCTAAAGTTGTGGATGTATGAACTTTTTTATTGTGTTTAAAGTGCATTTCTCTCAGTAATTAATGGATTGTGTGCTAATGTTCGAGATTATGATTTTATTGCTTTTTGGTTTTTCTTTTAAGGTTTCGCTTGATTTGGACGGGATTTGTTGTTAATAAGAATATGTTTTACTTGGTAATGAATACTGTCAAGCAATTTCCAGCTCATGGCCAAAATTGCAGAGAGTGCTTGAGTGGCCGTGTTTTTGACTTTTGGAGAAAAGATTTTGTTGAAGTGCTTTTGTTCGATTCCTTTGCGTACTACTTTTTATACACTCTTTGTAGTTGAACCAAAAAAGTCCTCTGGCTTCGTTCTTACACAGATCCAATTAATGCTCCCCATCTTTTGCTGTTTGGCTTCTAGTACCCGTTATCAAGTGTTGTTCCTGTGGAGGGAGGTGATCCCTTGTTCCTTGGCCCTTGGCCATCCTTTGCATGGTATAAGATTGGAATTGTACTTATGTGCTTCGTAAACTTCCAATTCTCATACGTTGCCATCCTTTTTGGTTGAAGATAATTATTTTCATGGTTGCAGCTATTGGAGATAGCTCATATGTTAATACCTGAGCAATCCTGAGAATGCGTACCCCATTTTTTCAATCTATTCTACAGCAACGGTAGAATTTCATTTCATTTTATTTGTCTTTTTTTTGGGGGGGGGGGGGGGGGGATTTTTTAAGCATTTTCACCTAGATTGTGAACCTTATGTCGGTATGACGTTTGGAATGAGATTGGCTCTTTTTCTTTTTTTGTTGAGAAATAGAGAATTCCTTGACAACTTCAAATGCTAACTTTATTATTCCTAAATACGTGGCAAATGTTCAGTCTAGAGCAAGTTGACACATTTTCCCAATATTCTTTGTTTTGGAGGAATTTACACGCTCTAACTTCTCTCCCTCATGCATTTGGCAAATCAAGTTTGTCATCGAGTTTTGAGATCATGTAAATCATACTTGGAGGATTTTGACTTTATGAATTGAATGAAGGTTCTAACTTCTCTTTTGTTGTTTTGTCTTCAATAGACAACAGATTCTCTTTGATGTCCATTTTCTTGAGTTTCATTGTTCTGATTTTGTTATTTTTTAAGGACTATTAACTGTGTGTAAGCTGGAGTGGTTTAGGGTTTCTTTTTAGTTTGTTTTGGGGTCTTGTTCCTTTGAAGTACACAGCTCTTGGAAGTTTGACTTTTGTAGTAAAGTTTGGTTAATCGATGGTAACATCCATGGAAAAGTAAACTTTCTTCGTCATGAGAGAGTAATATATCTTTTGGTAACATCTCTTTTGGTTAGAGACATAGCCTAGAAAGATATATTTATTAGCTTCAGGTTCAATTTTACTTCCTTTTAGGAGAGTGATTATGGGTAAAGGCAATTTAACAAAAACATTTAAGAACAAATATTCATAGTGGCATGTAAAGATTTTCAAACTCTATTTATTTCTCACAATCAAGGATTTTCTTTATGATATGATCCTTGTAGTGCATTTTTACAGGAGTTATAATTGAAGCCTATTGATATGTTTTTAGGTTGGCTTTAATCCTATGATAATTCTTTTATTTTTGGGCAGTTTGGATACAGAAGCGTTATAGGATCTTCATTGGGTACTTTTATGGTTGGAGAAGATGTGTGAGAGATTTTAAATTTCTGTATTCCATATGGAGATCTCTCAAGTTCTTTTGTAATTTTGACTCCCTCTTTTATTGGTGCCAATTGTAATAGTCCGTGTTTTTTTAACATTGTTATGTGTCGTTGACATCTCACCTCCCTCTCCTAGTTTTTCTGTTAATGAAAACTTTTCAATCTAAGAGAGGATTAAATTAGGAGAAATTGATAGGAATTTGATAGACCACCTATTGTCCTGCAGTACAGTAGGAGAGGAAAGAAAGGTTTGGAACGTGTAAAAGGGGATCATGTGGGAATCCAAATTAATTAGAGTTTGTTACTAATTCTGGAAGTATAAATAGTGTCTCTTTTAGGGGAGGGAGAGTTAGTTAGTTGTATTCTGAATTTCTGTTTCATCCTTGAGAGATAGGATAGCAGAGAGGGAAGAGTGTGCCCTAGTTACCGAATTGAGACTCTCTCAATTCATTCTTCTATATTTCACCATATTGTACTGTTTGATTTCATCCCATCAATAACATCAGAATAATTTTCATTCTTGATATTCAAATTTGGGCTCCACAAGAATTGTTACGATGAATTAGAAAGGATTCTGGCTTTTGACACTTGATTCAAGGAGGATGTAACCATTGAACTGGTATATAACACTAGTCATGCATGGGTATCGGATAGTTTGATACTGATGAATGATGTGTATTGTGCCTTGGTTCCTCTTGACTGCTTTTATCTATTTTGGATCTGTTGCAAAATTTTCACTGTAGTTGTCCTCTCTATTTTCCACACACAGAGACAAACTGAAGTGCTTTTTTATGTTCTCACCAGCACCCCTTTAAGTTGTTACTTACATCTGAAACTGCTGCAGGTTGGGACAATTGTTCTTCTTGCAATGACGGGATCGCTCATCTTTCTGTTCTTCTTTCTGGCAGCCACTCTCAATGCCATTATTATCTCTCTTCTTGTATCCTTGGCAGCAGTTGGAGGCTTCTTGGCTCTTTTCTTTGCTTGCGTAACAGCCATATATGTGGGGGCATTAGGAGTTGCTTTGTTTGTTATATCTACTGCAACAATCTCAGCAATTGTAGCAGTGGTGATCGCCGCAGGTACCAATAATATACACTTCTCTAAATCACGTTTCTTGAAAACCTCTTAACCAACTGGTATGAAATTCTACGTATTGGTTTGAAATGGTTGGGTCTCAGTCTCATAAGGGAAACGAAAAACATCAACATTATCCTCCCATCTTTTCTGTAGGAATAAACAAAATATAATCGAGATGTTAAAAGAAAATAACAGTGGAAACACAAAAATCACATGGAAAATTCTTAATGCCCCCCATAAAGAAATCTACTACGGGTAGAATTATTACATCCACAGACAATTCTCTTCTCGATTCTGATTGCTAGAATTCTCTCTCAAAACTTTGATGTACCACCACTCACGCACCTTTTCCTGCTTTTTGACTAGAGTAGTACACTCAGTAACCAAGCTTAAAATGCTGCTCCTTTATAGTGTTTGGTACCCATTTGATGTAAGAAGAATAGGGTTTACTTGGGTACTTGGGTAATATTCTAGGTTAATTCTCTTTTTACTCCCACCTGTAATAAAATTCTATTGGTAAGACTCTTCCCCTCTTGTATGAAACAATTGTTATCATTCTAATAAAAGATTCATAATTTGATTCTTGGAGGATTACTCCTTAAGACTACTTAGGCTCATCAGTTCATTTTTATGAGTCTTTGCTACTCTTCTAATATTTTGCCGAAAGCCTTATAATCGTATAGTTAGCAGTTTGATAACTTTTTGTTTCTACTCTTCCTTTTCTCTACCCACAATTTAAATTGTATCTTCAATCATTAGGATGAATTTAACTTGTACACACCAATGAAAATGTTGTAAGCTAAGAGTTTCTTAACGAATCGGAGGATCCAGAGAAGTTCTGCCTTCTATTAAACAAATGCACATACTAGTCAATGATTTTCCACTGATTTTGTTTGTCTTCATGAGAGTAGACCTTGGGTCAATTGGTCACTTTTGGGCGGTTGCCATATTTTTCTGTGCTCTAACATCTTACCTTCTCAAAATTCAGGATGGATTGGGTTCTTCTGTATGGTTTGGCTAGCAATACGCAAAAGTTTTGGTCTTGCGAAGCGGTCAGTGAGTGCGAGCAATTCAGCAATTTCAGCATTTTCTTATGCTAGGCGTGCCCACAAAGACTAGGTAAATGTTTCAGATCCTTTAAATGAATGCTATGAAGTGGGGTATGTTATTCTCAAAATTCTGGTGCATATATTATAATGAGTTTTCGAAGGCCTTTTTAGTGTATCCATAATGTGTAATCTTACAATGTAAATAATCTTTTAAAAGTATATTATCTACTTTATGGGCTTCTTTATTGGCGATGAAAGTACTAAGATTTGAGATAGCTCTTCCATGAACTATAATCATAATTTTTAAGTATATTTCTTTTTCTTTCACTATGAACTGTAATTGTCAAAATTTTATAGGATTAAAATTTAAGGAGTCCAATCAGGGTTTGTTTGACTCAATGACTTCCTAAGTTTGAGGTTGGAACTTATGTATTCGATTGTTCAAGGGAATGGATTATATAAATTCAAGTGTGTAAATGTGATTATATAAATTCAAAATGTGTGTAAATGTGATTTTATAAATTTAGATGTGTGTAAACGTGAAATTACTAATGCCAACC

mRNA sequence

ATGGCGGAAGCGCACGACTCCGATGATCGGAATACCACCGTGCCGGTTGAGGAAGAAGATGCATCCAGTCATCAATCCAAAGGAGTGTGTACGGAGGATCAGACCGTTTATGAACCTCTCCGCCGTCTGATCGCTGAGATTTTCTTTCCCGATGAAATTAAGGGTTCTTTGTTTCATCGCGTCAAGGTCTCTGTCACTGATAATGGCCCTGCCGTTGCACAAGCTTGCAGAAACTTTGGTCGCGACGTTCTTTCTTGGACTCGTAGGGGCAGTCCTCTGCGAGCGCTCCTTGTTATCTCTGTGAGTATTGCCGATAATTCTAAAGTTGTGGATGTTGGGACAATTGTTCTTCTTGCAATGACGGGATCGCTCATCTTTCTGTTCTTCTTTCTGGCAGCCACTCTCAATGCCATTATTATCTCTCTTCTTGTATCCTTGGCAGCAGTTGGAGGCTTCTTGGCTCTTTTCTTTGCTTGCGTAACAGCCATATATGTGGGGGCATTAGGAGTTGCTTTGTTTGTTATATCTACTGCAACAATCTCAGCAATTGTAGCAGTGGTGATCGCCGCAGGATGGATTGGGTTCTTCTGTATGGTTTGGCTAGCAATACGCAAAAGTTTTGGTCTTGCGAAGCGGTCAGTGAGTGCGAGCAATTCAGCAATTTCAGCATTTTCTTATGCTAGGCGTGCCCACAAAGACTAGGTAAATGTTTCAGATCCTTTAAATGAATGCTATGAAGTGGGGTATGTTATTCTCAAAATTCTGGTGCATATATTATAATGAGTTTTCGAAGGCCTTTTTAGTGTATCCATAATGTGTAATCTTACAATGTAAATAATCTTTTAAAAGTATATTATCTACTTTATGGGCTTCTTTATTGGCGATGAAAGTACTAAGATTTGAGATAGCTCTTCCATGAACTATAATCATAATTTTTAAGTATATTTCTTTTTCTTTCACTATGAACTGTAATTGTCAAAATTTTATAGGATTAAAATTTAAGGAGTCCAATCAGGGTTTGTTTGACTCAATGACTTCCTAAGTTTGAGGTTGGAACTTATGTATTCGATTGTTCAAGGGAATGGATTATATAAATTCAAGTGTGTAAATGTGATTATATAAATTCAAAATGTGTGTAAATGTGATTTTATAAATTTAGATGTGTGTAAACGTGAAATTACTAATGCCAACC

Coding sequence (CDS)

ATGGCGGAAGCGCACGACTCCGATGATCGGAATACCACCGTGCCGGTTGAGGAAGAAGATGCATCCAGTCATCAATCCAAAGGAGTGTGTACGGAGGATCAGACCGTTTATGAACCTCTCCGCCGTCTGATCGCTGAGATTTTCTTTCCCGATGAAATTAAGGGTTCTTTGTTTCATCGCGTCAAGGTCTCTGTCACTGATAATGGCCCTGCCGTTGCACAAGCTTGCAGAAACTTTGGTCGCGACGTTCTTTCTTGGACTCGTAGGGGCAGTCCTCTGCGAGCGCTCCTTGTTATCTCTGTGAGTATTGCCGATAATTCTAAAGTTGTGGATGTTGGGACAATTGTTCTTCTTGCAATGACGGGATCGCTCATCTTTCTGTTCTTCTTTCTGGCAGCCACTCTCAATGCCATTATTATCTCTCTTCTTGTATCCTTGGCAGCAGTTGGAGGCTTCTTGGCTCTTTTCTTTGCTTGCGTAACAGCCATATATGTGGGGGCATTAGGAGTTGCTTTGTTTGTTATATCTACTGCAACAATCTCAGCAATTGTAGCAGTGGTGATCGCCGCAGGATGGATTGGGTTCTTCTGTATGGTTTGGCTAGCAATACGCAAAAGTTTTGGTCTTGCGAAGCGGTCAGTGAGTGCGAGCAATTCAGCAATTTCAGCATTTTCTTATGCTAGGCGTGCCCACAAAGACTAG

Protein sequence

MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHRVKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVSIADNSKVVDVGTIVLLAMTGSLIFLFFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATISAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD

Homology

[Close]

BLAST of CsGy5G015060 vs. NCBI nr
Match: XP_004140295.1 (PREDICTED: uncharacterized protein LOC101212066 [Cucumis sativus] >KGN51068.1 hypothetical protein Csa_5G427940 [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 5.5e-96
Identity = 216/233 (92.70%), Postives = 216/233 (92.70%), Query Frame = 0


Query: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHR 60
           MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHR
Sbjct: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHR 60

Query: 61  VKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVSIADNSKVVDVGTIVLLAM 120
           VKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVIS           VGTIVLLAM
Sbjct: 61  VKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVIS-----------VGTIVLLAM 120

Query: 121 TGSLIFLFFFLAATLNAXXXXXXXXXXXXXXXXXXXXACVTAIYVGALGVALFVISTATI 180
           TGSLIFLFFFLAATLNA  XXXXXXXXXXXXXX    ACVTAIYVGALGVALFVISTATI
Sbjct: 121 TGSLIFLFFFLAATLNAIIXXXXXXXXXXXXXXALFFACVTAIYVGALGVALFVISTATI 180

Query: 181 SAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD 234
           SAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD
Sbjct: 181 SAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD 222

[Close]

BLAST of CsGy5G015060 vs. NCBI nr
Match: XP_008463179.1 (PREDICTED: uncharacterized protein LOC103501388 [Cucumis melo])

HSP 1 Score: 333.6 bits (854), Expect = 5.5e-88
Identity = 191/233 (81.97%), Postives = 193/233 (82.83%), Query Frame = 0


Query: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHR 60
           MAEAHDSD RNTTVPVEEEDASSHQSKG+  +DQTVYEPLRRLIAEIFFPDEIKGSLFHR
Sbjct: 1   MAEAHDSDARNTTVPVEEEDASSHQSKGLSIDDQTVYEPLRRLIAEIFFPDEIKGSLFHR 60

Query: 61  VKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVSIADNSKVVDVGTIVLLAM 120
           VKVSV DNGPAV QACRNFG DVLSWTRRGSPLRALLVIS           VGTIVLLAM
Sbjct: 61  VKVSVADNGPAVGQACRNFGHDVLSWTRRGSPLRALLVIS-----------VGTIVLLAM 120

Query: 121 TGSLIFLFFFLAATLNAXXXXXXXXXXXXXXXXXXXXACVTAIYVGALGVALFVISTATI 180
           TGSLIFL FFLAATLNA                    ACVTAIYVGALGVALFVISTATI
Sbjct: 121 TGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATI 180

Query: 181 SAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD 234
           SAIVAVVIAAGWIGFF MVWLAI KSFGLAKRSVSASNSAISAFSYARRAHKD
Sbjct: 181 SAIVAVVIAAGWIGFFFMVWLAICKSFGLAKRSVSASNSAISAFSYARRAHKD 222

[Close]

BLAST of CsGy5G015060 vs. NCBI nr
Match: XP_023514904.1 (uncharacterized protein LOC111779077 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.7 bits (735), Expect = 3.5e-74
Identity = 164/234 (70.09%), Postives = 183/234 (78.21%), Query Frame = 0


Query: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKG-SLFH 60
           MAE +DSDDRN TVPVEE+D +SH+SKGV   DQTVYE LRRLIAE+F PD+ KG SLF 
Sbjct: 1   MAEKYDSDDRNGTVPVEEQDRTSHKSKGVYNMDQTVYETLRRLIAEVFSPDKAKGSSLFQ 60

Query: 61  RVKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVSIADNSKVVDVGTIVLLA 120
           RVKVS+T+NGPAV +ACRN GRDVL WTRRGSPLRALLVIS           VGTI LLA
Sbjct: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVIS-----------VGTIALLA 120

Query: 121 MTGSLIFLFFFLAATLNAXXXXXXXXXXXXXXXXXXXXACVTAIYVGALGVALFVISTAT 180
           +TG LIFL FFLAAT NA                    AC+TA+Y+GAL VALFVISTAT
Sbjct: 121 LTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTAT 180

Query: 181 ISAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD 234
           ISAIVAVVIAAGWIGFFC+VWLAIRKSFG+AK+S+SA +SAISAFS+ARRAHKD
Sbjct: 181 ISAIVAVVIAAGWIGFFCVVWLAIRKSFGIAKQSMSAGSSAISAFSHARRAHKD 223

[Close]

BLAST of CsGy5G015060 vs. NCBI nr
Match: XP_022922733.1 (uncharacterized protein LOC111430635 [Cucurbita moschata])

HSP 1 Score: 283.9 bits (725), Expect = 5.0e-73
Identity = 161/234 (68.80%), Postives = 183/234 (78.21%), Query Frame = 0


Query: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKG-SLFH 60
           MAE +DSDDRN TVPV+E+D +SH+SKGV   D+TVYE LRRLIAE+F PD+ KG SLF 
Sbjct: 1   MAEKYDSDDRNGTVPVDEQDRTSHKSKGVYNMDRTVYETLRRLIAEVFSPDKAKGSSLFQ 60

Query: 61  RVKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVSIADNSKVVDVGTIVLLA 120
           RVKVS+T+NGPAV +ACRN GRDVL WTRRGSPLRALLVIS           VGTI LLA
Sbjct: 61  RVKVSITENGPAVEKACRNIGRDVLCWTRRGSPLRALLVIS-----------VGTIALLA 120

Query: 121 MTGSLIFLFFFLAATLNAXXXXXXXXXXXXXXXXXXXXACVTAIYVGALGVALFVISTAT 180
           +TG LIFL FFLAAT NA                    AC+TA+Y+GAL VALFVISTAT
Sbjct: 121 LTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTAT 180

Query: 181 ISAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD 234
           ISAIVAVVIAAGWIGFFC+VWLA+RKSFG+AK+S+SA +SAISAFS+ARRAHKD
Sbjct: 181 ISAIVAVVIAAGWIGFFCVVWLAMRKSFGIAKQSMSAGSSAISAFSHARRAHKD 223

[Close]

BLAST of CsGy5G015060 vs. NCBI nr
Match: XP_022990837.1 (uncharacterized protein LOC111487608 [Cucurbita maxima])

HSP 1 Score: 282.0 bits (720), Expect = 1.9e-72
Identity = 160/234 (68.38%), Postives = 183/234 (78.21%), Query Frame = 0


Query: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKG-SLFH 60
           MAE +DSDDRN TVPV+E++ +SH+SKG+ +EDQTVYE LRRLIAE+F PD+ KG SLF 
Sbjct: 1   MAEKYDSDDRNGTVPVDEQERTSHKSKGLHSEDQTVYETLRRLIAEVFSPDKAKGSSLFQ 60

Query: 61  RVKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVSIADNSKVVDVGTIVLLA 120
           RVKVS+T+NGPAV +ACRN G DVL WTRRGSPLRALLVIS           VGTI LLA
Sbjct: 61  RVKVSITENGPAVEKACRNIGCDVLCWTRRGSPLRALLVIS-----------VGTIALLA 120

Query: 121 MTGSLIFLFFFLAATLNAXXXXXXXXXXXXXXXXXXXXACVTAIYVGALGVALFVISTAT 180
           +TG LIFL FFLAAT NA                    AC+TA+Y+GAL VALFVISTAT
Sbjct: 121 LTGLLIFLLFFLAATFNAVVISLLVSLAAVGGFLALFFACITAVYIGALTVALFVISTAT 180

Query: 181 ISAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD 234
           ISAIVAVVIAAGWIGFFC+VWLAIRKSFG+AK+S+SA +S ISAFS+ARRAHKD
Sbjct: 181 ISAIVAVVIAAGWIGFFCVVWLAIRKSFGIAKQSMSAGSSVISAFSHARRAHKD 223

[Close]

BLAST of CsGy5G015060 vs. TAIR10
Match: AT5G16550.1 (unknown protein)

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-34
Identity = 91/203 (44.83%), Postives = 118/203 (58.13%), Query Frame = 0


Query: 34  QTVYEPLRRLIAEIFFPDEIKG---SLFHRVKVSVTDNGPAVAQACRNFGRDVLSWTRRG 93
           +++Y  +   I  I FPD   G   S   RV+ SV +NGP + +A    GR++L WTRRG
Sbjct: 49  KSLYSLICLTIGSILFPDSKTGDASSFLERVRNSVAENGPKLREASERTGREILLWTRRG 108

Query: 94  SPLRALLVISVSIADNSKVVDVGTIVLLAMTGSLIFLFFFLAATLNAXXXXXXXXXXXXX 153
           S LRALLVI+           +GTIVLL     ++F  FF+AAT NA             
Sbjct: 109 SSLRALLVIT-----------MGTIVLLTTMALVVFTLFFVAATANAIIISLLISLAVAG 168

Query: 154 XXXXXXXACVTAIYVGALGVALFVISTATISAIVAVVIAAGWIGFFCMVWLAIRKSFGLA 213
                   C+T +Y+GAL VA FVISTAT+SA+V+V+IA+GWIGFF  VWL  R S  LA
Sbjct: 169 GFLALFFLCLTGVYIGALSVAAFVISTATVSAVVSVLIASGWIGFFYAVWLGTRGSLRLA 228

Query: 214 KRSVSASNSAISAFSYARRAHKD 234
           K+SVS   SAIS  + +R  H+D
Sbjct: 229 KQSVSVVGSAISGNTISRHQHQD 240

[Close]

BLAST of CsGy5G015060 vs. TrEMBL
Match: tr|A0A0A0KNC3|A0A0A0KNC3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G427940 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 3.6e-96
Identity = 216/233 (92.70%), Postives = 216/233 (92.70%), Query Frame = 0


Query: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHR 60
           MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHR
Sbjct: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHR 60

Query: 61  VKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVSIADNSKVVDVGTIVLLAM 120
           VKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVIS           VGTIVLLAM
Sbjct: 61  VKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVIS-----------VGTIVLLAM 120

Query: 121 TGSLIFLFFFLAATLNAXXXXXXXXXXXXXXXXXXXXACVTAIYVGALGVALFVISTATI 180
           TGSLIFLFFFLAATLNA  XXXXXXXXXXXXXX    ACVTAIYVGALGVALFVISTATI
Sbjct: 121 TGSLIFLFFFLAATLNAIIXXXXXXXXXXXXXXALFFACVTAIYVGALGVALFVISTATI 180

Query: 181 SAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD 234
           SAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD
Sbjct: 181 SAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD 222

[Close]

BLAST of CsGy5G015060 vs. TrEMBL
Match: tr|A0A1S3CIL4|A0A1S3CIL4_CUCME (uncharacterized protein LOC103501388 OS=Cucumis melo OX=3656 GN=LOC103501388 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 3.6e-88
Identity = 191/233 (81.97%), Postives = 193/233 (82.83%), Query Frame = 0


Query: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGSLFHR 60
           MAEAHDSD RNTTVPVEEEDASSHQSKG+  +DQTVYEPLRRLIAEIFFPDEIKGSLFHR
Sbjct: 1   MAEAHDSDARNTTVPVEEEDASSHQSKGLSIDDQTVYEPLRRLIAEIFFPDEIKGSLFHR 60

Query: 61  VKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVSIADNSKVVDVGTIVLLAM 120
           VKVSV DNGPAV QACRNFG DVLSWTRRGSPLRALLVIS           VGTIVLLAM
Sbjct: 61  VKVSVADNGPAVGQACRNFGHDVLSWTRRGSPLRALLVIS-----------VGTIVLLAM 120

Query: 121 TGSLIFLFFFLAATLNAXXXXXXXXXXXXXXXXXXXXACVTAIYVGALGVALFVISTATI 180
           TGSLIFL FFLAATLNA                    ACVTAIYVGALGVALFVISTATI
Sbjct: 121 TGSLIFLLFFLAATLNAIIISLLVSLAAVGGFLALFFACVTAIYVGALGVALFVISTATI 180

Query: 181 SAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHKD 234
           SAIVAVVIAAGWIGFF MVWLAI KSFGLAKRSVSASNSAISAFSYARRAHKD
Sbjct: 181 SAIVAVVIAAGWIGFFFMVWLAICKSFGLAKRSVSASNSAISAFSYARRAHKD 222

[Close]

BLAST of CsGy5G015060 vs. TrEMBL
Match: tr|A0A067KI39|A0A067KI39_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10524 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 6.7e-42
Identity = 109/212 (51.42%), Postives = 134/212 (63.21%), Query Frame = 0


Query: 25  QSKGVCTEDQTVYEPLRRLIAEIFFPDE----IKGSLFHRVKVSVTDNGPAVAQACRNFG 84
           + KGV  +D+T+Y  L  L+A IF P+        S   R+K+SV++NGP +  A +N G
Sbjct: 19  EKKGVHRKDETLYSVLHSLLAMIFVPESGSSVAAESFLQRIKISVSENGPLLKDATKNTG 78

Query: 85  RDVLSWTRRGSPLRALLVISVSIADNSKVVDVGTIVLLAMTGSLIFLFFFLAATLNAXXX 144
           R VL WTRRGSPLRALLVIS           VGTI LL +TG L+F+ FFLAAT+NA   
Sbjct: 79  RKVLLWTRRGSPLRALLVIS-----------VGTITLLTLTGLLVFMLFFLAATVNAIVV 138

Query: 145 XXXXXXXXXXXXXXXXXACVTAIYVGALGVALFVISTATISAIVAVVIAAGWIGFFCMVW 204
                            ACVTA+Y+GAL VALFVIST  ISAIVAV+IA GWIGFF  VW
Sbjct: 139 SLLISLAAAGGFLALFFACVTAVYIGALSVALFVISTTAISAIVAVLIATGWIGFFWTVW 198

Query: 205 LAIRKSFGLAKRSVSASNSAISAFSYARRAHK 233
           L  +KS G+AK S+S + SAISA+S AR   +
Sbjct: 199 LVTKKSVGVAKHSLSMTGSAISAYSSARHLRR 219

[Close]

BLAST of CsGy5G015060 vs. TrEMBL
Match: tr|W9S3F9|W9S3F9_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007805 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.5e-41
Identity = 109/221 (49.32%), Postives = 140/221 (63.35%), Query Frame = 0


Query: 16  VEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPD---EIKGS-LFHRVKVSVTDNGPA 75
           +EE    +  ++    +D+T+   + RLI+EI FPD   +  G+ L  R+K SV +NGP 
Sbjct: 1   MEENSNDTGANRAHRRDDETLNGVVHRLISEILFPDASGDTAGAPLLQRIKTSVAENGPL 60

Query: 76  VAQACRNFGRDVLSWTRRGSPLRALLVISVSIADNSKVVDVGTIVLLAMTGSLIFLFFFL 135
           + +A RN   +VL WTRRGSPLRALLVIS           VGTI LLA+TG L+F+ FFL
Sbjct: 61  LPEASRNTASNVLLWTRRGSPLRALLVIS-----------VGTITLLALTGLLVFMVFFL 120

Query: 136 AATLNAXXXXXXXXXXXXXXXXXXXXACVTAIYVGALGVALFVISTATISAIVAVVIAAG 195
            AT NA                    ACVTAIY+GAL +A FVIST  I+ I+AV+IAAG
Sbjct: 121 VATFNAIVVSLLISLAAAGGFLALFFACVTAIYIGALSIAAFVISTTAITTIIAVLIAAG 180

Query: 196 WIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHK 233
           WIGFFC VWL I+KS GLAK S+S ++SA+SA+S AR  H+
Sbjct: 181 WIGFFCTVWLVIKKSLGLAKHSLSMTSSALSAYSTARHTHQ 210

[Close]

BLAST of CsGy5G015060 vs. TrEMBL
Match: tr|M5WTH6|M5WTH6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa009705mg PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.5e-41
Identity = 119/236 (50.42%), Postives = 145/236 (61.44%), Query Frame = 0


Query: 1   MAEAHDSDDRNTTVPVEEEDASSHQSKGVCTEDQTVYEPLRRLIAEIFFPDEIKGS---- 60
           MAE + +   N  V V+  D     +K    E +T++    RLI  IFFP          
Sbjct: 57  MAEPYGT---NGAVDVDVTDDGEINTKATHRE-ETLFGVFHRLIDAIFFPGSTSAGTAAP 116

Query: 61  LFHRVKVSVTDNGPAVAQACRNFGRDVLSWTRRGSPLRALLVISVSIADNSKVVDVGTIV 120
           LF R+K S+ +N P + +A RN GR+VL WTRRGSPLRALLVIS           VGTI 
Sbjct: 117 LFRRIKNSLAENCPLLREASRNSGRNVLLWTRRGSPLRALLVIS-----------VGTIT 176

Query: 121 LLAMTGSLIFLFFFLAATLNAXXXXXXXXXXXXXXXXXXXXACVTAIYVGALGVALFVIS 180
           L+++TG L+F+ FFLAATLNA     XX             ACVTAIY+GAL VA+FVIS
Sbjct: 177 LISLTGLLVFMLFFLAATLNAVIISLXXSLAAAGGFLALFFACVTAIYIGALSVAVFVIS 236

Query: 181 TATISAIVAVVIAAGWIGFFCMVWLAIRKSFGLAKRSVSASNSAISAFSYARRAHK 233
             TISAI AV+I  GWIGFF +VWLA +KS GLAK+S S + SAISA+SY R AHK
Sbjct: 237 ATTISAIAAVLITTGWIGFFWIVWLAAKKSLGLAKQSFSVTGSAISAYSYGRHAHK 277

The following BLAST results are available for this feature:

BLAST of CsGy5G015060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140295.1	5.5e-96	92.70	PREDICTED: uncharacterized protein LOC101212066 [Cucumis sativus] >KGN51068.1 hy...	[more]
XP_008463179.1	5.5e-88	81.97	PREDICTED: uncharacterized protein LOC103501388 [Cucumis melo]	[more]
XP_023514904.1	3.5e-74	70.09	uncharacterized protein LOC111779077 [Cucurbita pepo subsp. pepo]	[more]
XP_022922733.1	5.0e-73	68.80	uncharacterized protein LOC111430635 [Cucurbita moschata]	[more]
XP_022990837.1	1.9e-72	68.38	uncharacterized protein LOC111487608 [Cucurbita maxima]	[more]

BLAST of CsGy5G015060 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16550.1	1.1e-34	44.83	unknown protein	[more]

BLAST of CsGy5G015060 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy5G015060 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KNC3\|A0A0A0KNC3_CUCSA	3.6e-96	92.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G427940 PE=4 SV=1	[more]
tr\|A0A1S3CIL4\|A0A1S3CIL4_CUCME	3.6e-88	81.97	uncharacterized protein LOC103501388 OS=Cucumis melo OX=3656 GN=LOC103501388 PE=...	[more]
tr\|A0A067KI39\|A0A067KI39_JATCU	6.7e-42	51.42	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10524 PE=4 SV=1	[more]
tr\|W9S3F9\|W9S3F9_9ROSA	1.5e-41	49.32	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007805 PE=4 SV=1	[more]
tr\|M5WTH6\|M5WTH6_PRUPE	1.5e-41	50.42	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa009705mg PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G015060.1	CsGy5G015060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR35508	FAMILY NOT NAMED	coord: 8..232

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G015060	Cla009149	Watermelon (97103) v1	cgybwmB391
CsGy5G015060	Csa5G427940	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G015060	MELO3C025122	Melon (DHL92) v3.5.1	cgybmeB294
CsGy5G015060	ClCG01G008740	Watermelon (Charleston Gray)	cgybwcgB342
CsGy5G015060	CSPI05G15240	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G015060	CmaCh15G007520	Cucurbita maxima (Rimu)	cgybcmaB600
CsGy5G015060	CmaCh04G022840	Cucurbita maxima (Rimu)	cgybcmaB676
CsGy5G015060	CmoCh15G007770	Cucurbita moschata (Rifu)	cgybcmoB574
CsGy5G015060	CmoCh04G023880	Cucurbita moschata (Rifu)	cgybcmoB654
CsGy5G015060	Lsi09G009130	Bottle gourd (USVL1VR-Ls)	cgyblsiB302
CsGy5G015060	Cp4.1LG01g19840	Cucurbita pepo (Zucchini)	cgybcpeB650
CsGy5G015060	Cp4.1LG13g05380	Cucurbita pepo (Zucchini)	cgybcpeB609
CsGy5G015060	MELO3C025122.2	Melon (DHL92) v3.6.1	cgybmedB294
CsGy5G015060	CsaV3_5G024270	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G015060	Cla97C01G008970	Watermelon (97103) v2	cgybwmbB328
CsGy5G015060	Bhi12G001053	Wax gourd	cgybwgoB428
CsGy5G015060	Carg18278	Silver-seed gourd	carcgybB0533
CsGy5G015060	Carg01454	Silver-seed gourd	carcgybB0819

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None