Lsi08G005290 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi08G005290
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionDof zinc finger protein 10
Locationchr08 : 13243607 .. 13244389 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTCTGCAGCAATGTCTGACCACCACCAACTCTCCCACGCGCCGCCACCGCATCTCCCTCCTCCTCCGCTGCCATTCGCCTCCCATCTCGAACGGAAATGGAAGCCCCATCTCGAAACAGCCCCAAATTGCCCCCGCTGCGCCTCCCCCAACACCAAATTCTGTTATTACAACAACTACAGCCTCTCTCAACCCAGATACTTCTGTAAATCCTGCCGCCGCTACTGGACTAAAGGCGGTTCCCTCCGTAACGTCCCCGTCGGCGGTGGCTGCCGCAAGAGCCGCCGTGCCAAATCCTCAAGATCCTCCGCCATCTCCCGTCCTACAAAACCCGATGTTTCTACCCAAATCACTGAATCCTCCTCCAATGGTTCCGATATCGATCTCGCCGCTGTTTTCGCCCGATTTTTGAACAGTCCCCCGAGTAGTGAACCTCAAGCGTTGACCAGCTCGCCGGAATCGGTTGACCCATTGGAGAATTCCGAGATCTTCTTTGAAGGTCTCTCAGATTTGCTATTCGACGAAGAAAATCAAGTGCAAGAAGAAAAACAGGGGATCCCAGGAAATTACGAGAATGTTCCATTTGGATTAGAAACAGAATTGGGTATTAATGAAGAACTATGGTCGTCACATCAAATGGAAGAACAACTTCAAGAATTGGACTCATTTTCTTGCAATTACAATGCGAATCATTTGCGGGTCTCGGATCAGTTCTGTCAAGTGGGGGATAATTGGAGTTCATTCGACTTCACAGCCGTAAATAATGTCGAATATTTCTAA

mRNA sequence

ATGTTCTCTGCAGCAATGTCTGACCACCACCAACTCTCCCACGCGCCGCCACCGCATCTCCCTCCTCCTCCGCTGCCATTCGCCTCCCATCTCGAACGGAAATGGAAGCCCCATCTCGAAACAGCCCCAAATTGCCCCCGCTGCGCCTCCCCCAACACCAAATTCTGTTATTACAACAACTACAGCCTCTCTCAACCCAGATACTTCTGTAAATCCTGCCGCCGCTACTGGACTAAAGGCGGTTCCCTCCGTAACGTCCCCGTCGGCGGTGGCTGCCGCAAGAGCCGCCGTGCCAAATCCTCAAGATCCTCCGCCATCTCCCGTCCTACAAAACCCGATGTTTCTACCCAAATCACTGAATCCTCCTCCAATGGTTCCGATATCGATCTCGCCGCTGTTTTCGCCCGATTTTTGAACAGTCCCCCGAGTAGTGAACCTCAAGCGTTGACCAGCTCGCCGGAATCGGTTGACCCATTGGAGAATTCCGAGATCTTCTTTGAAGGTCTCTCAGATTTGCTATTCGACGAAGAAAATCAAGTGCAAGAAGAAAAACAGGGGATCCCAGGAAATTACGAGAATGTTCCATTTGGATTAGAAACAGAATTGGGTATTAATGAAGAACTATGGTCGTCACATCAAATGGAAGAACAACTTCAAGAATTGGACTCATTTTCTTGCAATTACAATGCGAATCATTTGCGGGTCTCGGATCAGTTCTGTCAAGTGGGGGATAATTGGAGTTCATTCGACTTCACAGCCGTAAATAATGTCGAATATTTCTAA

Coding sequence (CDS)

ATGTTCTCTGCAGCAATGTCTGACCACCACCAACTCTCCCACGCGCCGCCACCGCATCTCCCTCCTCCTCCGCTGCCATTCGCCTCCCATCTCGAACGGAAATGGAAGCCCCATCTCGAAACAGCCCCAAATTGCCCCCGCTGCGCCTCCCCCAACACCAAATTCTGTTATTACAACAACTACAGCCTCTCTCAACCCAGATACTTCTGTAAATCCTGCCGCCGCTACTGGACTAAAGGCGGTTCCCTCCGTAACGTCCCCGTCGGCGGTGGCTGCCGCAAGAGCCGCCGTGCCAAATCCTCAAGATCCTCCGCCATCTCCCGTCCTACAAAACCCGATGTTTCTACCCAAATCACTGAATCCTCCTCCAATGGTTCCGATATCGATCTCGCCGCTGTTTTCGCCCGATTTTTGAACAGTCCCCCGAGTAGTGAACCTCAAGCGTTGACCAGCTCGCCGGAATCGGTTGACCCATTGGAGAATTCCGAGATCTTCTTTGAAGGTCTCTCAGATTTGCTATTCGACGAAGAAAATCAAGTGCAAGAAGAAAAACAGGGGATCCCAGGAAATTACGAGAATGTTCCATTTGGATTAGAAACAGAATTGGGTATTAATGAAGAACTATGGTCGTCACATCAAATGGAAGAACAACTTCAAGAATTGGACTCATTTTCTTGCAATTACAATGCGAATCATTTGCGGGTCTCGGATCAGTTCTGTCAAGTGGGGGATAATTGGAGTTCATTCGACTTCACAGCCGTAAATAATGTCGAATATTTCTAA

Protein sequence

MFSAAMSDHHQLSHAPPPHLPPPPLPFASHLERKWKPHLETAPNCPRCASPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSRSSAISRPTKPDVSTQITESSSNGSDIDLAAVFARFLNSPPSSEPQALTSSPESVDPLENSEIFFEGLSDLLFDEENQVQEEKQGIPGNYENVPFGLETELGINEELWSSHQMEEQLQELDSFSCNYNANHLRVSDQFCQVGDNWSSFDFTAVNNVEYF
Homology
[Close]
BLAST of Lsi08G005290 vs. Swiss-Prot
Match: DOF12_ARATH (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.4e-34
Identity = 101/248 (40.73%), Postives = 131/248 (52.82%), Query Frame = 1 

Query: 24  PLPFASHLERKWKPHLE----TAPNCPRCASPNTKFCYYNNYSLSQPRYFCKSCRRYWTK 83
           PLP    +  KWK   E    TAP CPRCAS NTKFCYYNNYSLSQPRYFCK CRRYWTK
Sbjct: 16  PLP-EMEIPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTK 75

Query: 84  GGSLRNVPVGGGCRKSRRAKSSRSSAISR-PTKPD---VSTQITESSSNGSDIDLAAVFA 143
           GGSLRN+PVGGGCRK  R++ +      R   +PD         +SS  GSDIDLAAVFA
Sbjct: 76  GGSLRNIPVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDIDLAAVFA 135

Query: 144 RFLNSPPSSEPQALTSSPESVDPLENSEIFFEGLS-DLLFDEENQVQEEKQGIPGNYENV 203
           +++     S     T S +   P+  +    E LS D+      Q  +   G  G + N+
Sbjct: 136 QYVTDRSPSSTDNTTGSDQD-SPITTTTHALESLSWDIC-----QETDVDLGFYGEFNNL 195

Query: 204 PFGLETELGI--------NEELWSSHQM--EEQLQELDSFSCNYNANHLRVSDQFCQVGD 253
               + +  +         EE++    +  ++++QE+   S +   + L     F   GD
Sbjct: 196 TQKTKEDQEVFGQFLQEDREEIFEFQGLLDDKEIQEILECSFSEEPDQLVSQGSFMINGD 255

[Close]
BLAST of Lsi08G005290 vs. Swiss-Prot
Match: DOF35_ARATH (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.0e-31
Identity = 68/112 (60.71%), Postives = 76/112 (67.86%), Query Frame = 1 

Query: 35  WKPHL----ETAPNCPRCASPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 94
           W+P+     E  P+CPRC S NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 95  GCRKSRRAKSSRSSAISRPTKPDVSTQITESSSNGSDIDLAAVFARFLNSPP 143
           GCRKSRR KSS  +     TK  ++            IDLA V+A FLN  P
Sbjct: 73  GCRKSRRPKSSSGN----NTKTSLTANSGNPGGGSPSIDLALVYANFLNPKP 120

[Close]
BLAST of Lsi08G005290 vs. Swiss-Prot
Match: DOF18_ARATH (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-26
Identity = 57/83 (68.67%), Postives = 68/83 (81.93%), Query Frame = 1 

Query: 23  PPLPFASHLERKWKPHLETAPNCPRCASPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGS 82
           PP P A+ +ERK +P  + A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT GGS
Sbjct: 30  PPSP-ATPVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGS 89

Query: 83  LRNVPVGGGCRKSRRAKSSRSSA 106
           LRN+PVGGG RK++R+ S+ SS+
Sbjct: 90  LRNIPVGGGVRKNKRSSSNSSSS 111

[Close]
BLAST of Lsi08G005290 vs. Swiss-Prot
Match: DOF21_ARATH (Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1 PE=2 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 3.4e-26
Identity = 72/121 (59.50%), Postives = 81/121 (66.94%), Query Frame = 1 

Query: 42  APNCPRCASPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSS 101
           A NCPRC SPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGG+LRNVPVGGGCR+++R+ SS
Sbjct: 47  AQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSSS 106

Query: 102 ------RSSAISRPTKPDVSTQIT--ESSSNGSD--IDLAAVFARFLNSPPSSEPQALTS 153
                  + +I+  T P  +  IT    SS G D  IDL   FA       SS  QA T 
Sbjct: 107 AFSKNNNNKSINFHTDPLQNPLITGMPPSSFGYDHSIDLNLAFATLQKHHLSS--QATTP 165

[Close]
BLAST of Lsi08G005290 vs. Swiss-Prot
Match: DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.4e-26
Identity = 62/114 (54.39%), Postives = 73/114 (64.04%), Query Frame = 1 

Query: 40  ETAPNCPRCASPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAK 99
           E A  CPRC S NTKFCYYNNYSL+QPRYFCKSCRRYWTKGG+LRN+PVGGGCRK++R+ 
Sbjct: 52  ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRST 111

Query: 100 SSRSSAISRPTKPD------VSTQITESSSNGSDIDLAAVFARFLNSPPSSEPQ 148
           SS + ++    +P        S       SN   IDL+  FA      P S  Q
Sbjct: 112 SSAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHIDLSLAFALLNKQHPGSSSQ 165

[Close]
BLAST of Lsi08G005290 vs. TrEMBL
Match: A0A0A0KGG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G338090 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 5.6e-116
Identity = 212/260 (81.54%), Postives = 229/260 (88.08%), Query Frame = 1 

Query: 1   MFSAAMSDHHQLSHAPPPHLPPPPLPFASHLERKWKPHLETAPNCPRCASPNTKFCYYNN 60
           MFS  MSDH QL        PPPP PF SHL+RKWKPHLE APNCPRCAS NTKFCYYNN
Sbjct: 1   MFSPPMSDHQQL--------PPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNN 60

Query: 61  YSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSRSSAISRPTKPDVSTQITE 120
           YSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSS+SSAISRP+KPD+S+Q T+
Sbjct: 61  YSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTD 120

Query: 121 SSSNGSDIDLAAVFARFLNSPPSSEPQALTSSPESVDPLENSEIFFEGLSDLLFDEENQV 180
           SSS+ SDIDLAAVFARFLN    SEPQ LTSSPESVDPLE SEIF EGLSD+L D+ENQ 
Sbjct: 121 SSSSASDIDLAAVFARFLN----SEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQR 180

Query: 181 QEEKQGIPGNYENVPFGLETELGINEELWSSHQMEEQLQELDSFSCNYNANHLRVSDQFC 240
           +EEKQGIPG+YENV FGLETELGI+EE+W+S +M+EQ+QELDSFSCNY AN LRVSDQFC
Sbjct: 181 EEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFC 240

Query: 241 QVGDNWSSFDFTAVNNVEYF 261
           QVGDNWSSFDF AVNNVEYF
Sbjct: 241 QVGDNWSSFDFAAVNNVEYF 248

[Close]
BLAST of Lsi08G005290 vs. TrEMBL
Match: A0A067L3I5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25217 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.1e-46
Identity = 134/293 (45.73%), Postives = 160/293 (54.61%), Query Frame = 1 

Query: 1   MFSAAMSDHHQLSHAPPPHLPPPPLPFASHLERKWKPHLETAPNCPRCASPNTKFCYYNN 60
           MF+      HQ S  P P            +ERKWK H+E APNCPRCAS NTKFCYYNN
Sbjct: 1   MFTDDQMMFHQYSSRPLP------------MERKWKSHVELAPNCPRCASTNTKFCYYNN 60

Query: 61  YSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSRSSAISRPTK-PDVSTQIT 120
           YSLSQPRYFCK+CRRYWTKGGSLRNVPVGGGCRK+RRAK+ R+S   R     + S  +T
Sbjct: 61  YSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKTRRAKAVRASQTDRVVSLNNYSRDLT 120

Query: 121 ESS----------SNGSDIDLAAVFARFLNSPPSSEP----QALTSSPESV-DPLENSEI 180
            SS          SNGSDIDLA VFA+FLN   S  P     +LT   E V D ++ S+ 
Sbjct: 121 SSSVDSFTQENQTSNGSDIDLAVVFAKFLNQDSSVNPNEFSNSLTVEKEKVSDLIQESDD 180

Query: 181 FFEGLSDLLFDEENQVQEEKQGIPGNYENV---PFGLETELG----INEELWS------- 240
           F EGL  +L  E+ Q QE +  I    E+     FGL+T LG    ++E LWS       
Sbjct: 181 FLEGLPPVLLVEDGQ-QENQDSIQEFIESPEMDAFGLQTFLGDQEMVHEALWSDQEAATL 240

Query: 241 ------------SHQMEEQLQELDSFSCNYNANHLRVSDQFCQVGDN-WSSFD 251
                         Q +E+ QE DSF+     + L+ S        N W SFD
Sbjct: 241 SNVLTWESTLLQQQQQQERTQEFDSFTVE---DQLKASAANLMSDINSWYSFD 277

[Close]
BLAST of Lsi08G005290 vs. TrEMBL
Match: B9SJH7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0137680 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.5e-41
Identity = 122/287 (42.51%), Postives = 157/287 (54.70%), Query Frame = 1 

Query: 24  PLPFASHLERKWKPHLETAPNCPRCASPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSL 83
           PLP    +E KWK H+E AP+CPRCAS NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSL
Sbjct: 8   PLP----MEGKWKTHVELAPSCPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSL 67

Query: 84  RNVPVGGGCRKSRRAKSSRS--------------SAISRPTKPDVSTQITESSSNGSDID 143
           RNVPVGGGCRKSRRAKSSR               S  S  +  D + Q T S+++GS+ID
Sbjct: 68  RNVPVGGGCRKSRRAKSSRGAVSMNYGKNFNGPLSGSSCSSNMDSTVQETGSNNDGSEID 127

Query: 144 LAAVFARFLNSPPSSEP-------------QALTSSPESVDP------LENSEIFFEGLS 203
           LA VFA+FLN   S +P             Q L S   S+ P      +E   +  E + 
Sbjct: 128 LAVVFAKFLNQESSFQPEFVGKELPDEPSDQELVSVANSLSPPDSDAVIECQNLIGESIQ 187

Query: 204 D--------LLFDEENQVQEEKQGIPGNYENVPFGLETELG---INEELWSSHQM----- 254
           +        L+   ++Q Q +++ I  + +   FGL+T LG   + + LWS  +      
Sbjct: 188 ESNDLLQALLVAGNQDQEQGDQEMIMESQDMNEFGLQTLLGDEIVQDALWSEAETSLSNV 247

[Close]
BLAST of Lsi08G005290 vs. TrEMBL
Match: A0A0D2N9D0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G081000 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 7.7e-41
Identity = 117/253 (46.25%), Postives = 146/253 (57.71%), Query Frame = 1 

Query: 31  LERKWKPHLETAPNCPRCASPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 90
           +ERKWK ++ETAPNCPRCAS NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 20  IERKWKSNVETAPNCPRCASANTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGG 79

Query: 91  GCRKSRRAKSSRSSAISRPTKPDVSTQITESSSNGS-----DIDLAAVFARFLNSPPSSE 150
           GCRKSRR KS R     R       ++ + SSS+G      DIDLA VFA+FLN   S +
Sbjct: 80  GCRKSRRGKSRRERVEKRDQISMTDSKNSTSSSDGDSGNQPDIDLALVFAKFLNHNTSFD 139

Query: 151 PQALTSSPESVDPLENSEIFFEGLSDLLFDEENQVQEEKQG-IPGNY--ENVP------- 210
                  PE VD +   E           +EEN  Q+   G IPG+Y  + +P       
Sbjct: 140 ------QPE-VDEIATQE---------SPNEENNSQKPVVGSIPGSYILQEMPETSQMEA 199

Query: 211 FGLET-----ELGINEELWSSHQMEE-----------QLQELDSFSCNYNANHLRVSDQF 253
           FGL+      E+ ++E+LWS H +             QLQ+ +SF  +     L+VS   
Sbjct: 200 FGLQNLLTGDEMVLHEDLWSDHDVATTTPDMEWQPLVQLQQYESFPVD---EQLKVSANL 251

[Close]
BLAST of Lsi08G005290 vs. TrEMBL
Match: V4SJ04_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002179mg PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.2e-40
Identity = 111/260 (42.69%), Postives = 148/260 (56.92%), Query Frame = 1 

Query: 31  LERKWKPHLETAPNCPRCASPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 90
           +E+KWKP +ETAP+CPRCASPNTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRNVP+GG
Sbjct: 1   MEKKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPMGG 60

Query: 91  GCRKSRRAKSSRSSAISRPTKP------DVSTQITESSSNGSDIDLAAVFARFLNSPPSS 150
           GCRK+RR KSSR  +     +P      D +     + + GSDIDLA VFA+FLN   SS
Sbjct: 61  GCRKNRRVKSSRRKSPFNNDRPKASCSSDHTDDAVSTPNGGSDIDLAVVFAKFLNESSSS 120

Query: 151 EPQAL-------TSSPESV---------DPLENSEI-----FFEGLSDLLFDEENQVQEE 210
           +   L       +S+P++V         + + N ++     F +    L  +E+ +VQ+ 
Sbjct: 121 QETDLSAAKTSNSSTPDNVVQNDDFNVHNVMGNGDLNMLGEFPQVFGQLQEEEDRRVQDF 180

Query: 211 KQGIPGNYENVPFGLETELGINE-ELWSSHQMEE------------QLQELDSFSCNYNA 251
            +    N   +   L  E+  ++  LWS     E            QLQ+ DSF  +   
Sbjct: 181 LEDDMVNAHGLQALLGDEIVDHQVALWSDQAETETLPNFTWQRAMFQLQDFDSFPAD--- 240

[Close]
BLAST of Lsi08G005290 vs. TAIR10
Match: AT1G21340.1 (AT1G21340.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 146.7 bits (369), Expect = 1.9e-35
Identity = 101/248 (40.73%), Postives = 131/248 (52.82%), Query Frame = 1 

Query: 24  PLPFASHLERKWKPHLE----TAPNCPRCASPNTKFCYYNNYSLSQPRYFCKSCRRYWTK 83
           PLP    +  KWK   E    TAP CPRCAS NTKFCYYNNYSLSQPRYFCK CRRYWTK
Sbjct: 16  PLP-EMEIPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTK 75

Query: 84  GGSLRNVPVGGGCRKSRRAKSSRSSAISR-PTKPD---VSTQITESSSNGSDIDLAAVFA 143
           GGSLRN+PVGGGCRK  R++ +      R   +PD         +SS  GSDIDLAAVFA
Sbjct: 76  GGSLRNIPVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDIDLAAVFA 135

Query: 144 RFLNSPPSSEPQALTSSPESVDPLENSEIFFEGLS-DLLFDEENQVQEEKQGIPGNYENV 203
           +++     S     T S +   P+  +    E LS D+      Q  +   G  G + N+
Sbjct: 136 QYVTDRSPSSTDNTTGSDQD-SPITTTTHALESLSWDIC-----QETDVDLGFYGEFNNL 195

Query: 204 PFGLETELGI--------NEELWSSHQM--EEQLQELDSFSCNYNANHLRVSDQFCQVGD 253
               + +  +         EE++    +  ++++QE+   S +   + L     F   GD
Sbjct: 196 TQKTKEDQEVFGQFLQEDREEIFEFQGLLDDKEIQEILECSFSEEPDQLVSQGSFMINGD 255

[Close]
BLAST of Lsi08G005290 vs. TAIR10
Match: AT3G52440.1 (AT3G52440.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 136.0 bits (341), Expect = 3.4e-32
Identity = 68/112 (60.71%), Postives = 76/112 (67.86%), Query Frame = 1 

Query: 35  WKPHL----ETAPNCPRCASPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 94
           W+P+     E  P+CPRC S NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 95  GCRKSRRAKSSRSSAISRPTKPDVSTQITESSSNGSDIDLAAVFARFLNSPP 143
           GCRKSRR KSS  +     TK  ++            IDLA V+A FLN  P
Sbjct: 73  GCRKSRRPKSSSGN----NTKTSLTANSGNPGGGSPSIDLALVYANFLNPKP 120

[Close]
BLAST of Lsi08G005290 vs. TAIR10
Match: AT1G64620.1 (AT1G64620.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 121.7 bits (304), Expect = 6.6e-28
Identity = 57/83 (68.67%), Postives = 68/83 (81.93%), Query Frame = 1 

Query: 23  PPLPFASHLERKWKPHLETAPNCPRCASPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGS 82
           PP P A+ +ERK +P  + A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT GGS
Sbjct: 30  PPSP-ATPVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGS 89

Query: 83  LRNVPVGGGCRKSRRAKSSRSSA 106
           LRN+PVGGG RK++R+ S+ SS+
Sbjct: 90  LRNIPVGGGVRKNKRSSSNSSSS 111

[Close]
BLAST of Lsi08G005290 vs. TAIR10
Match: AT2G28510.1 (AT2G28510.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 120.2 bits (300), Expect = 1.9e-27
Identity = 72/121 (59.50%), Postives = 81/121 (66.94%), Query Frame = 1 

Query: 42  APNCPRCASPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSS 101
           A NCPRC SPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGG+LRNVPVGGGCR+++R+ SS
Sbjct: 47  AQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSSS 106

Query: 102 ------RSSAISRPTKPDVSTQIT--ESSSNGSD--IDLAAVFARFLNSPPSSEPQALTS 153
                  + +I+  T P  +  IT    SS G D  IDL   FA       SS  QA T 
Sbjct: 107 AFSKNNNNKSINFHTDPLQNPLITGMPPSSFGYDHSIDLNLAFATLQKHHLSS--QATTP 165

[Close]
BLAST of Lsi08G005290 vs. TAIR10
Match: AT5G60200.1 (AT5G60200.1 TARGET OF MONOPTEROS 6)

HSP 1 Score: 120.2 bits (300), Expect = 1.9e-27
Identity = 62/114 (54.39%), Postives = 73/114 (64.04%), Query Frame = 1 

Query: 40  ETAPNCPRCASPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAK 99
           E A  CPRC S NTKFCYYNNYSL+QPRYFCKSCRRYWTKGG+LRN+PVGGGCRK++R+ 
Sbjct: 52  ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRST 111

Query: 100 SSRSSAISRPTKPD------VSTQITESSSNGSDIDLAAVFARFLNSPPSSEPQ 148
           SS + ++    +P        S       SN   IDL+  FA      P S  Q
Sbjct: 112 SSAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHIDLSLAFALLNKQHPGSSSQ 165

[Close]
BLAST of Lsi08G005290 vs. NCBI nr
Match: gi|659081848|ref|XP_008441540.1| (PREDICTED: dof zinc finger protein DOF1.2 [Cucumis melo])

HSP 1 Score: 426.0 bits (1094), Expect = 4.7e-116
Identity = 213/260 (81.92%), Postives = 229/260 (88.08%), Query Frame = 1 

Query: 1   MFSAAMSDHHQLSHAPPPHLPPPPLPFASHLERKWKPHLETAPNCPRCASPNTKFCYYNN 60
           MFS  MSDHHQL        PPPP PF SHLERKWKPHLETAPNCPRCAS NTKFCYYNN
Sbjct: 1   MFSPPMSDHHQL--------PPPPPPFPSHLERKWKPHLETAPNCPRCASTNTKFCYYNN 60

Query: 61  YSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSRSSAISRPTKPDVSTQITE 120
           YSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSS+SS ISRP+KPD+S+Q T+
Sbjct: 61  YSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSPISRPSKPDLSSQTTD 120

Query: 121 SSSNGSDIDLAAVFARFLNSPPSSEPQALTSSPESVDPLENSEIFFEGLSDLLFDEENQV 180
           SSS+ SDIDLAAVFARFLN    SEPQALTSSPESVDPLE SEIF EGLSDLL ++ENQ 
Sbjct: 121 SSSSASDIDLAAVFARFLN----SEPQALTSSPESVDPLEISEIFLEGLSDLLLEDENQR 180

Query: 181 QEEKQGIPGNYENVPFGLETELGINEELWSSHQMEEQLQELDSFSCNYNANHLRVSDQFC 240
           +E KQGIPGN+ENV FGLETELGI+EE+W+S +M+EQ+QELDSFSCNY AN LRVSDQ C
Sbjct: 181 EEGKQGIPGNHENVSFGLETELGIDEEVWASQEMQEQVQELDSFSCNYYANDLRVSDQLC 240

Query: 241 QVGDNWSSFDFTAVNNVEYF 261
           QVGDNWSSFDF AVNNVEYF
Sbjct: 241 QVGDNWSSFDFAAVNNVEYF 248

[Close]
BLAST of Lsi08G005290 vs. NCBI nr
Match: gi|778714878|ref|XP_004148826.2| (PREDICTED: dof zinc finger protein DOF1.2 [Cucumis sativus])

HSP 1 Score: 425.2 bits (1092), Expect = 8.0e-116
Identity = 212/260 (81.54%), Postives = 229/260 (88.08%), Query Frame = 1 

Query: 1   MFSAAMSDHHQLSHAPPPHLPPPPLPFASHLERKWKPHLETAPNCPRCASPNTKFCYYNN 60
           MFS  MSDH QL        PPPP PF SHL+RKWKPHLE APNCPRCAS NTKFCYYNN
Sbjct: 1   MFSPPMSDHQQL--------PPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNN 60

Query: 61  YSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSRSSAISRPTKPDVSTQITE 120
           YSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSS+SSAISRP+KPD+S+Q T+
Sbjct: 61  YSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTD 120

Query: 121 SSSNGSDIDLAAVFARFLNSPPSSEPQALTSSPESVDPLENSEIFFEGLSDLLFDEENQV 180
           SSS+ SDIDLAAVFARFLN    SEPQ LTSSPESVDPLE SEIF EGLSD+L D+ENQ 
Sbjct: 121 SSSSASDIDLAAVFARFLN----SEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQR 180

Query: 181 QEEKQGIPGNYENVPFGLETELGINEELWSSHQMEEQLQELDSFSCNYNANHLRVSDQFC 240
           +EEKQGIPG+YENV FGLETELGI+EE+W+S +M+EQ+QELDSFSCNY AN LRVSDQFC
Sbjct: 181 EEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFC 240

Query: 241 QVGDNWSSFDFTAVNNVEYF 261
           QVGDNWSSFDF AVNNVEYF
Sbjct: 241 QVGDNWSSFDFAAVNNVEYF 248

[Close]
BLAST of Lsi08G005290 vs. NCBI nr
Match: gi|802559213|ref|XP_012066060.1| (PREDICTED: dof zinc finger protein DOF1.2 [Jatropha curcas])

HSP 1 Score: 192.6 bits (488), Expect = 8.7e-46
Identity = 134/293 (45.73%), Postives = 160/293 (54.61%), Query Frame = 1 

Query: 1   MFSAAMSDHHQLSHAPPPHLPPPPLPFASHLERKWKPHLETAPNCPRCASPNTKFCYYNN 60
           MF+      HQ S  P P            +ERKWK H+E APNCPRCAS NTKFCYYNN
Sbjct: 1   MFTDDQMMFHQYSSRPLP------------MERKWKSHVELAPNCPRCASTNTKFCYYNN 60

Query: 61  YSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSRSSAISRPTK-PDVSTQIT 120
           YSLSQPRYFCK+CRRYWTKGGSLRNVPVGGGCRK+RRAK+ R+S   R     + S  +T
Sbjct: 61  YSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKTRRAKAVRASQTDRVVSLNNYSRDLT 120

Query: 121 ESS----------SNGSDIDLAAVFARFLNSPPSSEP----QALTSSPESV-DPLENSEI 180
            SS          SNGSDIDLA VFA+FLN   S  P     +LT   E V D ++ S+ 
Sbjct: 121 SSSVDSFTQENQTSNGSDIDLAVVFAKFLNQDSSVNPNEFSNSLTVEKEKVSDLIQESDD 180

Query: 181 FFEGLSDLLFDEENQVQEEKQGIPGNYENV---PFGLETELG----INEELWS------- 240
           F EGL  +L  E+ Q QE +  I    E+     FGL+T LG    ++E LWS       
Sbjct: 181 FLEGLPPVLLVEDGQ-QENQDSIQEFIESPEMDAFGLQTFLGDQEMVHEALWSDQEAATL 240

Query: 241 ------------SHQMEEQLQELDSFSCNYNANHLRVSDQFCQVGDN-WSSFD 251
                         Q +E+ QE DSF+     + L+ S        N W SFD
Sbjct: 241 SNVLTWESTLLQQQQQQERTQEFDSFTVE---DQLKASAANLMSDINSWYSFD 277

[Close]
BLAST of Lsi08G005290 vs. NCBI nr
Match: gi|743911883|ref|XP_010999807.1| (PREDICTED: dof zinc finger protein DOF1.2-like [Populus euphratica])

HSP 1 Score: 182.2 bits (461), Expect = 1.2e-42
Identity = 121/285 (42.46%), Postives = 157/285 (55.09%), Query Frame = 1 

Query: 23  PPLPFASHLERKWKPHLETAPNCPRCASPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGS 82
           PP PF    E+KWK  +E APNCPRCASPNTKFCYYNNYSLSQPRYFCK CRRYWTKGGS
Sbjct: 13  PPRPFPK--EKKWKSKVEAAPNCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGS 72

Query: 83  LRNVPVGGGCRKSRRAKSSRSSAISRPT---------------KPDVSTQITESSSNGSD 142
           +RNVPVGGGCRK RRAKSS+ S   R                   +  +   +  +NGSD
Sbjct: 73  IRNVPVGGGCRKYRRAKSSKVSQNERAAVSVNYSRTNETTLACSANKDSMAQQGEANGSD 132

Query: 143 IDLAAVFARFLNSPPSSEPQ-----------------ALTSSPES-------VDPLENSE 202
           IDLA VFA+FLN   S EP                  + +S+P         ++ L+ S+
Sbjct: 133 IDLAVVFAKFLNQDLSYEPDFTGEDLLNEGGDQMVDVSNSSNPSDSFQNDTMMESLKRSD 192

Query: 203 I-----FFEGLSDLLFDEENQVQEEK-QGIPGNYENVPFGLETELG---INEELWS---- 251
           +     F EG S +L  E+ +++EE+ Q +  + +   FGL+  L    + + LWS    
Sbjct: 193 LIQESNFLEGQSQVLVGEKQRLEEERIQELIESQDMNAFGLQDLLSDEIVQDALWSDDAT 252

[Close]
BLAST of Lsi08G005290 vs. NCBI nr
Match: gi|568837879|ref|XP_006472946.1| (PREDICTED: dof zinc finger protein DOF1.2 [Citrus sinensis])

HSP 1 Score: 181.0 bits (458), Expect = 2.6e-42
Identity = 125/294 (42.52%), Postives = 164/294 (55.78%), Query Frame = 1 

Query: 5   AMSDHHQLS------HAPPPHLPPPPL--PFASHLERKWKPHLETAPNCPRCASPNTKFC 64
           A SDHH+        +A PPHL  P L    A+ +E+KWKP +ETAP+CPRCASPNTKFC
Sbjct: 3   AASDHHRHHQQMLQYYAYPPHLGSPMLLPNNAAAMEKKWKPDVETAPSCPRCASPNTKFC 62

Query: 65  YYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSRSSAISRPTKP---- 124
           YYNNYSLSQPRYFCK CRRYWTKGGSLRNVPVGGGCRK+ RAKSSR  +     +P    
Sbjct: 63  YYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNGRAKSSRRKSPFNNDRPKASC 122

Query: 125 --DVSTQITESSSNGSDIDLAAVFARFLNSPPSSEPQAL-------TSSPESV------- 184
             D +     + + GSDIDLA VFA+FLN   SS+   L       +S+P++V       
Sbjct: 123 SSDHTDDAVSTPNGGSDIDLAVVFAKFLNESSSSQETDLSAAKTSSSSTPDNVVQNDDFN 182

Query: 185 --DPLENSEI-----FFEGLSDLLFDEENQVQEEKQGIPGNYENVPFGLETELGINE-EL 244
             + + N ++     F +    L  +E+ +VQ+  +    N   +   L  E+  ++  L
Sbjct: 183 VHNVMGNGDLNILGEFPQVFGQLQEEEDRRVQDFLEDDMVNAHGLQALLGDEIVDHQVAL 242

Query: 245 WSSHQMEE------------QLQELDSFSCNYNANHLRVSDQFCQVGDNWSSFD 251
           WS     E            QLQ+ DSF  +   + L+ S     + DNW+SFD
Sbjct: 243 WSDQAETETLPNFTWQRAMFQLQDFDSFPAD---DQLKASANL--ISDNWTSFD 291

The following BLAST results are available for this feature:
BLAST of Lsi08G005290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DOF12_ARATH3.4e-3440.73Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2 PE=2 SV=1[more]
DOF35_ARATH6.0e-3160.71Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5 PE=3 SV=1[more]
DOF18_ARATH1.2e-2668.67Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8 PE=2 SV=1[more]
DOF21_ARATH3.4e-2659.50Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1 PE=2 SV=2[more]
DOF53_ARATH3.4e-2654.39Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1[more]
BLAST of Lsi08G005290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGG2_CUCSA5.6e-11681.54Uncharacterized protein OS=Cucumis sativus GN=Csa_6G338090 PE=4 SV=1[more]
A0A067L3I5_JATCU6.1e-4645.73Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25217 PE=4 SV=1[more]
B9SJH7_RICCO1.5e-4142.51Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0137680 PE=4 SV=1[more]
A0A0D2N9D0_GOSRA7.7e-4146.25Uncharacterized protein OS=Gossypium raimondii GN=B456_005G081000 PE=4 SV=1[more]
V4SJ04_9ROSI2.2e-4042.69Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002179mg PE=4 SV=1[more]
BLAST of Lsi08G005290 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G21340.11.9e-3540.73 Dof-type zinc finger DNA-binding family protein[more]
AT3G52440.13.4e-3260.71 Dof-type zinc finger DNA-binding family protein[more]
AT1G64620.16.6e-2868.67 Dof-type zinc finger DNA-binding family protein[more]
AT2G28510.11.9e-2759.50 Dof-type zinc finger DNA-binding family protein[more]
AT5G60200.11.9e-2754.39 TARGET OF MONOPTEROS 6[more]
BLAST of Lsi08G005290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659081848|ref|XP_008441540.1|4.7e-11681.92PREDICTED: dof zinc finger protein DOF1.2 [Cucumis melo][more]
gi|778714878|ref|XP_004148826.2|8.0e-11681.54PREDICTED: dof zinc finger protein DOF1.2 [Cucumis sativus][more]
gi|802559213|ref|XP_012066060.1|8.7e-4645.73PREDICTED: dof zinc finger protein DOF1.2 [Jatropha curcas][more]
gi|743911883|ref|XP_010999807.1|1.2e-4242.46PREDICTED: dof zinc finger protein DOF1.2-like [Populus euphratica][more]
gi|568837879|ref|XP_006472946.1|2.6e-4242.52PREDICTED: dof zinc finger protein DOF1.2 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G005290.1Lsi08G005290.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 32..92
score: 8.0
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 42..97
score: 5.6
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 45..81
scor
IPR003851Zinc finger, Dof-typePROFILEPS50884ZF_DOF_2coord: 43..97
score: 28
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 32..216
score: 2.2
NoneNo IPR availablePANTHERPTHR31992:SF8DOF ZINC FINGER PROTEIN DOF1.1-RELATEDcoord: 32..216
score: 2.2