CsaV3_6G030900 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G030900
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionDof zinc finger protein
Locationchr6 : 17144445 .. 17145767 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCGACCACCAACAACTCCCTCCTCCTCCCCCGCCATTCCCCTCCCATCTACAACGCAAATGGAAACCCCATCTCGAAGCAGCCCCAAATTGCCCCCGCTGCGCCTCCACAAACACTAAATTCTGCTATTACAACAACTACAGCCTCTCCCAACCCAGATACTTCTGTAAATCCTGTCGCCGCTACTGGACCAAAGGCGGCTCCCTCCGCAACGTCCCCGTCGGTGGTGGCTGCCGCAAGAGCCGCCGTGCCAAGTCCTCAAAATCCTCCGCCATCTCCCGTCCTTCAAAACCCGACCTTTCTTCCCAAACCACCGACTCCTCCTCCTCTGCCTCCGATATCGATCTCGCCGCTGTGTTCGCCCGATTTTTGAACAGTGAGCCTCAGACGTTGACTAGCTCGCCGGAATCGGTTGACCCATTGGAGATTTCCGAGATCTTCTTGGAAGGTCTCTCAGATATGCTATTGGACGATGAAAATCAAAGGGAAGAAGAAAAACAGGGGATCCCGGGAAGTTACGAGAATGTTTCATTTGGGTTAGAAACAGAGTTGGGGATTGATGAAGAAGTATGGGCGTCACCAGAAATGCAAGAACAAGTTCAAGAATTGGACTCATTTTCTTGCAATTACTATGCGAATGACTTGCGGGTTTCTGATCAGTTCTGTCAAGTGGGAGATAACTGGAGCTCATTCGACTTTGCAGCCGTAAATAATGTCGAATATTTTTAATATATATCGTTACATTCATATACATTTTTCATATTCTTCTGTGAAAGAAATTTATATAAACATATATATATATATATATAGTCGATACTAAGAAATTTCGATGGTGGATCAAAATTACATGGGAATCCAAATTGTTACATTGAAACCTATATGTTAAAATAAAATTTAAGTTTAGTGCAAGTGAAGAGGTATTTGTGATTTATGACACAATCGTTCATCAAATACGAATTTTCATTAAATTTTGAAGAATCATTGCTTGGCTTATATATTCTGCGATTGTAACCCTGCAACTATAAAAGGGAATGAAAAAGTCAAAGTTTGATTTGGCAAGAAATTAGAGAAGTGAAGAAGATTTTTTATTCTTTTTCTATATATCAACACACACAGCTTAATGAAGACGAAGAGTGGAAAAAAAGAAAGATAAATATTTAATATATATATGTATGTATGTAAGTCTGTTCTGCCAAGAATTTATAGTTCATCTCAATCATATAGGAACAACAATTTTTGGGTAATTTCATTGGGTTAACCTATAACAATAAACTCGCATATTTCTTACAACCAAGGCAGATTCGAGGAAGGTTGGATTAG

mRNA sequence

ATGTCCGACCACCAACAACTCCCTCCTCCTCCCCCGCCATTCCCCTCCCATCTACAACGCAAATGGAAACCCCATCTCGAAGCAGCCCCAAATTGCCCCCGCTGCGCCTCCACAAACACTAAATTCTGCTATTACAACAACTACAGCCTCTCCCAACCCAGATACTTCTGTAAATCCTGTCGCCGCTACTGGACCAAAGGCGGCTCCCTCCGCAACGTCCCCGTCGGTGGTGGCTGCCGCAAGAGCCGCCGTGCCAAGTCCTCAAAATCCTCCGCCATCTCCCGTCCTTCAAAACCCGACCTTTCTTCCCAAACCACCGACTCCTCCTCCTCTGCCTCCGATATCGATCTCGCCGCTGTGTTCGCCCGATTTTTGAACAGTGAGCCTCAGACGTTGACTAGCTCGCCGGAATCGGTTGACCCATTGGAGATTTCCGAGATCTTCTTGGAAGGTCTCTCAGATATGCTATTGGACGATGAAAATCAAAGGGAAGAAGAAAAACAGGGGATCCCGGGAAGTTACGAGAATGTTTCATTTGGGTTAGAAACAGAGTTGGGGATTGATGAAGAAGTATGGGCGTCACCAGAAATGCAAGAACAAGTTCAAGAATTGGACTCATTTTCTTGCAATTACTATGCGAATGACTTGCGGGTTTCTGATCAGTTCTGTCAAGTGGGAGATAACTGGAGCTCATTCGACTTTGCAGCCATTCGAGGAAGGTTGGATTAG

Coding sequence (CDS)

ATGTCCGACCACCAACAACTCCCTCCTCCTCCCCCGCCATTCCCCTCCCATCTACAACGCAAATGGAAACCCCATCTCGAAGCAGCCCCAAATTGCCCCCGCTGCGCCTCCACAAACACTAAATTCTGCTATTACAACAACTACAGCCTCTCCCAACCCAGATACTTCTGTAAATCCTGTCGCCGCTACTGGACCAAAGGCGGCTCCCTCCGCAACGTCCCCGTCGGTGGTGGCTGCCGCAAGAGCCGCCGTGCCAAGTCCTCAAAATCCTCCGCCATCTCCCGTCCTTCAAAACCCGACCTTTCTTCCCAAACCACCGACTCCTCCTCCTCTGCCTCCGATATCGATCTCGCCGCTGTGTTCGCCCGATTTTTGAACAGTGAGCCTCAGACGTTGACTAGCTCGCCGGAATCGGTTGACCCATTGGAGATTTCCGAGATCTTCTTGGAAGGTCTCTCAGATATGCTATTGGACGATGAAAATCAAAGGGAAGAAGAAAAACAGGGGATCCCGGGAAGTTACGAGAATGTTTCATTTGGGTTAGAAACAGAGTTGGGGATTGATGAAGAAGTATGGGCGTCACCAGAAATGCAAGAACAAGTTCAAGAATTGGACTCATTTTCTTGCAATTACTATGCGAATGACTTGCGGGTTTCTGATCAGTTCTGTCAAGTGGGAGATAACTGGAGCTCATTCGACTTTGCAGCCATTCGAGGAAGGTTGGATTAG

Protein sequence

MSDHQQLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDIDLAAVFARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAIRGRLD
Homology
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BLAST of CsaV3_6G030900 vs. NCBI nr
Match: XP_004148826.2 (PREDICTED: dof zinc finger protein DOF1.2 [Cucumis sativus] >KGN47477.1 hypothetical protein Csa_6G338090 [Cucumis sativus])

HSP 1 Score: 396.4 bits (1017), Expect = 7.2e-107
Identity = 233/237 (98.31%), Postives = 234/237 (98.73%), Query Frame = 0 

Query: 1   MSDHQQLXXXXXXFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSC 60
           MSDH   XXXXXXFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSC
Sbjct: 6   MSDHXXXXXXXXXFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSC 65

Query: 61  RRYWTKGGSLRNVPVGGGCRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLAAV 120
           RRYWTKGGSLRNVPVGGGCRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLAAV
Sbjct: 66  RRYWTKGGSLRNVPVGGGCRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLAAV 125

Query: 121 FARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYENVSFG 180
           FARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYENVSFG
Sbjct: 126 FARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYENVSFG 185

Query: 181 LETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAI 238
           LETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAA+
Sbjct: 186 LETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAV 242

[Close]
BLAST of CsaV3_6G030900 vs. NCBI nr
Match: XP_022993920.1 (dof zinc finger protein DOF1.2-like [Cucurbita maxima])

HSP 1 Score: 305.1 bits (780), Expect = 2.2e-79
Identity = 171/244 (70.08%), Postives = 189/244 (77.46%), Query Frame = 0 

Query: 1   MSDHQQL--XXXXXXFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCK 60
           MSDH QL  XXXXXXF SHL+RKWKPHLE APNCPRCAS NTKFCYYNNYSLSQPRYFCK
Sbjct: 6   MSDHHQLPXXXXXXXFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCK 65

Query: 61  SCRRYWTKGGSLRNVPVGGGCRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLA 120
           SCRRYWTKGGSLRNVPVGGGCRKS     XXXXXXXXXX                 IDLA
Sbjct: 66  SCRRYWTKGGSLRNVPVGGGCRKSRRTRSXXXXXXXXXXNPDTSTQITESSSNGPDIDLA 125

Query: 121 AVFARFLNSEP-----QTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGS 180
           AVFAR+LN+ P      TLTSSPESVDPLE  EIF EGL+D+L+++ENQ +E+KQGI G+
Sbjct: 126 AVFARYLNTTPPSTEHHTLTSSPESVDPLENCEIFFEGLTDLLIEEENQPQEQKQGIMGN 185

Query: 181 YENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFD 238
           YEN  FGL  ELG++EE+WAS    +Q+QELDSFSCNY AN      QFC+VGDNWSSFD
Sbjct: 186 YENTPFGLHAELGVEEELWAS----QQIQELDSFSCNYNAN------QFCEVGDNWSSFD 239

[Close]
BLAST of CsaV3_6G030900 vs. NCBI nr
Match: XP_022939534.1 (dof zinc finger protein DOF1.2-like [Cucurbita moschata])

HSP 1 Score: 299.3 bits (765), Expect = 1.2e-77
Identity = 160/229 (69.87%), Postives = 175/229 (76.42%), Query Frame = 0 

Query: 14  FPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNV 73
           F SHL+RKWKPHLE APNCPRCAS NTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNV
Sbjct: 20  FASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNV 79

Query: 74  PVGGGCRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLAAVFARFLNSEP---- 133
           PVGGGCRKS     XXXXXXXXXX                 IDLAAVFAR+LN+ P    
Sbjct: 80  PVGGGCRKSRRTRSXXXXXXXXXXNPDTSTQITESSSNGPDIDLAAVFARYLNTAPPSTE 139

Query: 134 -QTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYENVSFGLETELGID 193
              LTSSPESVDPLE  EIF EGLSD+L ++ENQ +E+KQGI G+YEN  FGL  ELG++
Sbjct: 140 AHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGNYENTPFGLHAELGVE 199

Query: 194 EEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAI 238
           EEVWAS    +Q+QELDSFSCNY AN      QFC+VGDNWSSFDFAA+
Sbjct: 200 EEVWAS----QQIQELDSFSCNYNAN------QFCEVGDNWSSFDFAAV 238

[Close]
BLAST of CsaV3_6G030900 vs. NCBI nr
Match: XP_023522776.1 (dof zinc finger protein DOF1.2-like [Cucurbita pepo subsp. pepo] >XP_023551553.1 dof zinc finger protein DOF1.2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77
Identity = 152/229 (66.38%), Postives = 168/229 (73.36%), Query Frame = 0 

Query: 14  FPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNV 73
           F SHL+RKWKPHLE APNCPRCAS NTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNV
Sbjct: 20  FASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNV 79

Query: 74  PVGGGCRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLAAVFARFLNSEP---- 133
           PVGGGCRKS      XXX                       IDLAAVFAR+LN+ P    
Sbjct: 80  PVGGGCRKSRRTRSSXXXTVSRSTNPNTCTQITESSSNGPDIDLAAVFARYLNTAPPSTE 139

Query: 134 -QTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYENVSFGLETELGID 193
              LTSSPESVDPLE  EI  EGLSD+L+++ENQ +E+KQGI G+YEN  FGL  ELG++
Sbjct: 140 AHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNYENTPFGLHAELGVE 199

Query: 194 EEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAI 238
           EEVWAS    +Q+QELDSFSCNY AN      QFC+VGDNWSSFDFAA+
Sbjct: 200 EEVWAS----QQIQELDSFSCNYNAN------QFCEVGDNWSSFDFAAV 238

[Close]
BLAST of CsaV3_6G030900 vs. NCBI nr
Match: XP_022141618.1 (dof zinc finger protein DOF1.2-like [Momordica charantia])

HSP 1 Score: 221.5 bits (563), Expect = 3.2e-54
Identity = 127/230 (55.22%), Postives = 153/230 (66.52%), Query Frame = 0 

Query: 17  HLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVG 76
           HLQRKWKPHLEAAPNCPRCAS NTKFCYYNNYSLSQPRYFCK+CRRYWTKGGSLRNVPVG
Sbjct: 25  HLQRKWKPHLEAAPNCPRCASANTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVG 84

Query: 77  GGCRKS--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLAAVFARFLNSE------ 136
           GGCRK+                                  IDLAAVFARFLNS+      
Sbjct: 85  GGCRKARRAKSSLPRPHSSDRLNPNSTKSDDASSSSTGSDIDLAAVFARFLNSDDSPPTG 144

Query: 137 PQTLTSS--PESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPG-SYENVSFGLETEL 196
           P  LTSS  P+++ P   SEIF +GLSD++LD++++++E    I G +Y+N  F    EL
Sbjct: 145 PHALTSSPLPDNLTPESNSEIFFDGLSDLILDEQHKKQE----ITGNNYQNFPF----EL 204

Query: 197 GI-DEEVWASPEMQEQVQELDSF-SCNYYANDLRVSDQFCQVGDNWSSFD 234
           G+ D+E+W  PE+     EL+ F +C+     +RV+DQFCQVGDNWSSFD
Sbjct: 205 GVDDDELW--PEL-----ELEPFANCH-----VRVTDQFCQVGDNWSSFD 234

[Close]
BLAST of CsaV3_6G030900 vs. TAIR10
Match: AT1G21340.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 128.3 bits (321), Expect = 6.6e-30
Identity = 87/237 (36.71%), Postives = 113/237 (47.68%), Query Frame = 0 

Query: 18  LQRKWKPHLE----AAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNV 77
           +  KWK   E     AP CPRCAS+NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRN+
Sbjct: 22  IPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNI 81

Query: 78  PVGGGCRK----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLAAVFARFLNSEP 137
           PVGGGCRK                                     IDLAAVFA+++    
Sbjct: 82  PVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDIDLAAVFAQYVTDRS 141

Query: 138 QTLTSSPESVD---PLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYENVSFGLETELG 197
            + T +    D   P+  +   LE LS     D  Q  +   G  G + N++   + +  
Sbjct: 142 PSSTDNTTGSDQDSPITTTTHALESLS----WDICQETDVDLGFYGEFNNLTQKTKEDQE 201

Query: 198 I--------DEEVWASPEM--QEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFD 234
           +         EE++    +   +++QE+   S +   + L     F   GDNWSS D
Sbjct: 202 VFGQFLQEDREEIFEFQGLLDDKEIQEILECSFSEEPDQLVSQGSFMINGDNWSSTD 254

[Close]
BLAST of CsaV3_6G030900 vs. TAIR10
Match: AT3G52440.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-28
Identity = 61/112 (54.46%), Postives = 68/112 (60.71%), Query Frame = 0 

Query: 22  WKP----HLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 81
           W+P    + E  P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 82  GCRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLAAVFARFLNSEP 130
           GCRKS                                IDLA V+A FLN +P
Sbjct: 73  GCRKS----RRPKSSSGNNTKTSLTANSGNPGGGSPSIDLALVYANFLNPKP 120

[Close]
BLAST of CsaV3_6G030900 vs. TAIR10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6)

HSP 1 Score: 115.2 bits (287), Expect = 5.8e-26
Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 0 

Query: 27  EAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKS 83
           E A  CPRC STNTKFCYYNNYSL+QPRYFCKSCRRYWTKGG+LRN+PVGGGCRK+
Sbjct: 52  ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKN 107

[Close]
BLAST of CsaV3_6G030900 vs. TAIR10
Match: AT3G55370.3 (OBF-binding protein 3)

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-24
Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 0 

Query: 24  PHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKS 83
           P  EAA NCPRC STNTKFCY+NNYSL+QPR+FCK+CRRYWT+GGSLRNVPVGGG R++
Sbjct: 115 PLPEAALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRRN 173

[Close]
BLAST of CsaV3_6G030900 vs. TAIR10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 109.0 bits (271), Expect = 4.2e-24
Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 0 

Query: 19 QRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVG 77
          +RK +P  + A NCPRC STNTKFCYYNNYSL+QPRYFCK CRRYWT+GGSLRN+PVG
Sbjct: 42 ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVG 99

[Close]
BLAST of CsaV3_6G030900 vs. Swiss-Prot
Match: sp|P68349|DOF12_ARATH (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28
Identity = 87/237 (36.71%), Postives = 113/237 (47.68%), Query Frame = 0 

Query: 18  LQRKWKPHLE----AAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNV 77
           +  KWK   E     AP CPRCAS+NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRN+
Sbjct: 22  IPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNI 81

Query: 78  PVGGGCRK----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLAAVFARFLNSEP 137
           PVGGGCRK                                     IDLAAVFA+++    
Sbjct: 82  PVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDIDLAAVFAQYVTDRS 141

Query: 138 QTLTSSPESVD---PLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYENVSFGLETELG 197
            + T +    D   P+  +   LE LS     D  Q  +   G  G + N++   + +  
Sbjct: 142 PSSTDNTTGSDQDSPITTTTHALESLS----WDICQETDVDLGFYGEFNNLTQKTKEDQE 201

Query: 198 I--------DEEVWASPEM--QEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFD 234
           +         EE++    +   +++QE+   S +   + L     F   GDNWSS D
Sbjct: 202 VFGQFLQEDREEIFEFQGLLDDKEIQEILECSFSEEPDQLVSQGSFMINGDNWSSTD 254

[Close]
BLAST of CsaV3_6G030900 vs. Swiss-Prot
Match: sp|Q9SVC5|DOF35_ARATH (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.9e-27
Identity = 61/112 (54.46%), Postives = 68/112 (60.71%), Query Frame = 0 

Query: 22  WKP----HLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 81
           W+P    + E  P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 82  GCRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLAAVFARFLNSEP 130
           GCRKS                                IDLA V+A FLN +P
Sbjct: 73  GCRKS----RRPKSSSGNNTKTSLTANSGNPGGGSPSIDLALVYANFLNPKP 120

[Close]
BLAST of CsaV3_6G030900 vs. Swiss-Prot
Match: sp|O24463|PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.0e-25
Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 0 

Query: 19  QRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGG 78
           +RK +P L  A  CPRC S NTKFCYYNNYS+SQPRYFCK+CRRYWT GG+LRNVP+GGG
Sbjct: 49  ERKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGG 108

Query: 79  CRKS 83
           CRK+
Sbjct: 109 CRKN 112

[Close]
BLAST of CsaV3_6G030900 vs. Swiss-Prot
Match: sp|Q84TE9|DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-24
Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 0 

Query: 27  EAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKS 83
           E A  CPRC STNTKFCYYNNYSL+QPRYFCKSCRRYWTKGG+LRN+PVGGGCRK+
Sbjct: 52  ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKN 107

[Close]
BLAST of CsaV3_6G030900 vs. Swiss-Prot
Match: sp|Q6Z345|DOF4_ORYSJ (Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.5e-23
Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 29 APNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKS 83
          A  CPRC STNTKFCYYNNY+LSQPR+FCKSCRRYWTKGG LRNVPVGGGCRK+
Sbjct: 44 AVKCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKT 97

[Close]
BLAST of CsaV3_6G030900 vs. TrEMBL
Match: tr|A0A0A0KGG2|A0A0A0KGG2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G338090 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 4.8e-107
Identity = 233/237 (98.31%), Postives = 234/237 (98.73%), Query Frame = 0 

Query: 1   MSDHQQLXXXXXXFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSC 60
           MSDH   XXXXXXFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSC
Sbjct: 6   MSDHXXXXXXXXXFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSC 65

Query: 61  RRYWTKGGSLRNVPVGGGCRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLAAV 120
           RRYWTKGGSLRNVPVGGGCRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLAAV
Sbjct: 66  RRYWTKGGSLRNVPVGGGCRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLAAV 125

Query: 121 FARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYENVSFG 180
           FARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYENVSFG
Sbjct: 126 FARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYENVSFG 185

Query: 181 LETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAI 238
           LETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAA+
Sbjct: 186 LETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAV 242

[Close]
BLAST of CsaV3_6G030900 vs. TrEMBL
Match: tr|A0A067L3I5|A0A067L3I5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_25217 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 6.8e-37
Identity = 98/221 (44.34%), Postives = 121/221 (54.75%), Query Frame = 0 

Query: 2   SDHQQLXXXXXXFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCR 61
           +D Q +       P  ++RKWK H+E APNCPRCASTNTKFCYYNNYSLSQPRYFCK+CR
Sbjct: 3   TDDQMMFHQYSSRPLPMERKWKSHVELAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACR 62

Query: 62  RYWTKGGSLRNVPVGGGCRK-----------SXXXXXXXXXXXXXXXXXXXXXXXXXXXX 121
           RYWTKGGSLRNVPVGGGCRK           +                            
Sbjct: 63  RYWTKGGSLRNVPVGGGCRKTRRAKAVRASQTDRVVSLNNYSRDLTSSSVDSFTQENQTS 122

Query: 122 XXXXIDLAAVFARFLNSE--------PQTLTSSPESV-DPLEISEIFLEGLSDMLLDDEN 181
               IDLA VFA+FLN +          +LT   E V D ++ S+ FLEGL  +LL ++ 
Sbjct: 123 NGSDIDLAVVFAKFLNQDSSVNPNEFSNSLTVEKEKVSDLIQESDDFLEGLPPVLLVEDG 182

Query: 182 QREEEK--QGIPGSYENVSFGLETELG----IDEEVWASPE 197
           Q+E +   Q    S E  +FGL+T LG    + E +W+  E
Sbjct: 183 QQENQDSIQEFIESPEMDAFGLQTFLGDQEMVHEALWSDQE 223

[Close]
BLAST of CsaV3_6G030900 vs. TrEMBL
Match: tr|A0A2K2BEV6|A0A2K2BEV6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G070700v3 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.1e-34
Identity = 112/288 (38.89%), Postives = 147/288 (51.04%), Query Frame = 0 

Query: 2   SDHQQLXXXXXXFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCR 61
           SD          FP  ++RKWK ++E APNCPRCAS NTKFCYYNNYSLSQPRYFCK CR
Sbjct: 5   SDQMMFQCPPRPFP--MERKWKSNIEVAPNCPRCASPNTKFCYYNNYSLSQPRYFCKGCR 64

Query: 62  RYWTKGGSLRNVPVGGGCRK------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI 121
           RYWTKGGSLRNVP GGGCRK      +                                I
Sbjct: 65  RYWTKGGSLRNVPAGGGCRKYRRNERAAVSLDYSRANETLACSSNKDSVAQQDGANGSDI 124

Query: 122 DLAAVFARFLNSE----PQTL----------------TSSPES--------VDPLEISEI 181
           DLAAVF++FLN +    P+ +                +S+P S        ++ L+ S++
Sbjct: 125 DLAAVFSKFLNQDLSYGPEFIGEELRDEGSELVNISNSSTPISDSYQNDPMMESLKRSDL 184

Query: 182 -----FLEGLSDMLLDDENQREEEK--QGIPGSYENVSFGLETELGIDEEV----WAS-- 236
                 LEG S +L+ ++ Q EE++  Q +  S +  +FGL+  L IDE V    W+   
Sbjct: 185 TQESNLLEGRSQVLVGEKQQFEEDQRFQELIESQDMNAFGLQNLL-IDEIVQDALWSDDA 244

[Close]
BLAST of CsaV3_6G030900 vs. TrEMBL
Match: tr|A0A2P6PSB3|A0A2P6PSB3_ROSCH (Putative transcription factor C2C2-Dof family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0276721 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33
Identity = 105/272 (38.60%), Postives = 131/272 (48.16%), Query Frame = 0 

Query: 22  WKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRK 81
           WKPH+E APNCPRCAS+NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRNVPVGGGCRK
Sbjct: 26  WKPHVEIAPNCPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRK 85

Query: 82  S-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLAAVFARFLN-- 141
           +                                             IDLAAVFA+FLN  
Sbjct: 86  NRRGRSVRLSQADRVSLSYYRHNSSSGSGGDLSEQQSMEGGANGSDIDLAAVFAKFLNQD 145

Query: 142 -------------------------SEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDEN 201
                                    S+   ++S+PE  D LE  E+ LEGL  +L D ++
Sbjct: 146 SSNEHDPNLVGSESIPDDVHEANALSDHSQISSNPEE-DLLESVEL-LEGL--VLPDQDH 205

Query: 202 QREEEKQGIPGSYENV--------SFGLETELGIDEEVW-------ASPEMQEQVQELDS 238
           Q+  E+  I     N          FGL+  LG ++  W        S       QELD+
Sbjct: 206 QQLHEEDNIQNIMGNQHHHDLSIHEFGLQGLLGDEDVFWTDTTASLTSSTTSFTWQELDN 265

[Close]
BLAST of CsaV3_6G030900 vs. TrEMBL
Match: tr|A0A2C9WEY0|A0A2C9WEY0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G176400 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33
Identity = 99/272 (36.40%), Postives = 134/272 (49.26%), Query Frame = 0 

Query: 15  PSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVP 74
           P  ++RKWK  +E AP+CPRCAS+NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRNVP
Sbjct: 17  PLPMERKWKSQVELAPHCPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVP 76

Query: 75  VGGGCRKS----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDLA 134
           VGGGCRK+                                                IDLA
Sbjct: 77  VGGGCRKTRRAKSVRVSQNDREGFGKNDFSGFDGRINGSTGDSMAQGTVANGSSSEIDLA 136

Query: 135 AVFARFLNS--------EPQTLTSSPESVDP--------------LEISEIFLEGLSDML 194
            VFA+FLN         + Q  +++P S  P              ++ S++ LEGL  + 
Sbjct: 137 VVFAKFLNQDSSFHPEFQAQETSTAPNSSTPDSAVIEGDDKITDLIQESDLLLEGLPPVT 196

Query: 195 LDDENQREEEK--QGIPGSYENVSFGLETELG---IDEEVWASP--------EMQEQVQE 236
           + D  Q+E+E+  Q +  S +  +FGL+T LG   + + +W+          E  +  QE
Sbjct: 197 VRDHEQQEDEERIQELLESQDMDAFGLQTLLGDEMVQDALWSETATLPNFTWETVQPQQE 256

The following BLAST results are available for this feature:
BLAST of CsaV3_6G030900 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004148826.27.2e-10798.31PREDICTED: dof zinc finger protein DOF1.2 [Cucumis sativus] >KGN47477.1 hypothet... [more]
XP_022993920.12.2e-7970.08dof zinc finger protein DOF1.2-like [Cucurbita maxima][more]
XP_022939534.11.2e-7769.87dof zinc finger protein DOF1.2-like [Cucurbita moschata][more]
XP_023522776.12.0e-7766.38dof zinc finger protein DOF1.2-like [Cucurbita pepo subsp. pepo] >XP_023551553.1... [more]
XP_022141618.13.2e-5455.22dof zinc finger protein DOF1.2-like [Momordica charantia][more]
BLAST of CsaV3_6G030900 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G21340.16.6e-3036.71Dof-type zinc finger DNA-binding family protein[more]
AT3G52440.11.6e-2854.46Dof-type zinc finger DNA-binding family protein[more]
AT5G60200.15.8e-2685.71TARGET OF MONOPTEROS 6[more]
AT3G55370.31.9e-2479.66OBF-binding protein 3[more]
AT4G24060.14.2e-2477.59Dof-type zinc finger DNA-binding family protein[more]
BLAST of CsaV3_6G030900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P68349|DOF12_ARATH1.2e-2836.71Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV... [more]
sp|Q9SVC5|DOF35_ARATH2.9e-2754.46Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV... [more]
sp|O24463|PBF_MAIZE8.0e-2575.00Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1[more]
sp|Q84TE9|DOF53_ARATH1.0e-2485.71Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV... [more]
sp|Q6Z345|DOF4_ORYSJ1.5e-2387.04Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 ... [more]
BLAST of CsaV3_6G030900 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KGG2|A0A0A0KGG2_CUCSA4.8e-10798.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G338090 PE=4 SV=1[more]
tr|A0A067L3I5|A0A067L3I5_JATCU6.8e-3744.34Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_25217 PE=4 SV=1[more]
tr|A0A2K2BEV6|A0A2K2BEV6_POPTR4.1e-3438.89Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G070700v3 PE=... [more]
tr|A0A2P6PSB3|A0A2P6PSB3_ROSCH1.2e-3338.60Putative transcription factor C2C2-Dof family OS=Rosa chinensis OX=74649 GN=Rchi... [more]
tr|A0A2C9WEY0|A0A2C9WEY0_MANES1.2e-3336.40Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G176400 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G030900.1CsaV3_6G030900.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 29..84
e-value: 1.3E-32
score: 111.7
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 32..68
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 18..79
e-value: 2.0E-25
score: 286.0
IPR003851Zinc finger, Dof-typePROSITEPS50884ZF_DOF_2coord: 30..84
score: 28.742
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..110
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 19..136
NoneNo IPR availablePANTHERPTHR31992:SF73DOF ZINC FINGER PROTEIN DOF3.5coord: 19..136