Cp4.1LG13g04090 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG13g04090
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDof zinc finger protein
LocationCp4.1LG13 : 6290209 .. 6290928 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCGACCACCACCAGCTCCCTCCTCCACCTCCGCCGCCGTTCGCCTCCCATCTCGAGCGGAAATGGAAGCCTCATCTCGAAACAGCTCCAAATTGCCCTCGTTGCGCCTCCGCCAATACCAAATTCTGTTATTACAACAACTACAGCCTCTCCCAACCTAGATACTTTTGTAAATCCTGTCGACGCTATTGGACCAAAGGCGGTTCCCTCCGTAACGTCCCTGTCGGCGGTGGCTGTCGTAAGAGTCGTCGTACCAGGTCCTCACGATCCTCAACTGTCTCACGTTCTACCAACCCCAACACTTGTACACAAATCACTGAATCCTCCTCTAATGGACCCGATATCGATCTTGCTGCCGTTTTCGCTAGATATTTGAACACCGCCCCACCAAGTACTGAGGCACACGCGTTGACCAGCTCGCCCGAATCCGTTGACCCTTTAGAGAATTGTGAAATCTTGTTTGAAGGGCTGTCGGATTTGTTAATTGAGGAGGAAAATCAAGCCCAAGAACAAAAACAGGGGATTATGGGAAATTACGAAAATACTCCGTTTGGGTTACACGCGGAATTGGGCGTTGAGGAAGAAGTATGGGCGTCGCAACAAATCCAAGAATTGGACTCTTTTTCTTGCAATTATAATGCGAATCAATTCTGTGAAGTGGGAGATAATTGGAGCTCATTCGACTTTGCAGCCGTAAATAATGTCGAATATTTCTAA

mRNA sequence

ATGTCCGACCACCACCAGCTCCCTCCTCCACCTCCGCCGCCGTTCGCCTCCCATCTCGAGCGGAAATGGAAGCCTCATCTCGAAACAGCTCCAAATTGCCCTCGTTGCGCCTCCGCCAATACCAAATTCTGTTATTACAACAACTACAGCCTCTCCCAACCTAGATACTTTTGTAAATCCTGTCGACGCTATTGGACCAAAGGCGGTTCCCTCCGTAACGTCCCTGTCGGCGGTGGCTGTCGTAAGAGTCGTCGTACCAGGTCCTCACGATCCTCAACTGTCTCACGTTCTACCAACCCCAACACTTGTACACAAATCACTGAATCCTCCTCTAATGGACCCGATATCGATCTTGCTGCCGTTTTCGCTAGATATTTGAACACCGCCCCACCAAGTACTGAGGCACACGCGTTGACCAGCTCGCCCGAATCCGTTGACCCTTTAGAGAATTGTGAAATCTTGTTTGAAGGGCTGTCGGATTTGTTAATTGAGGAGGAAAATCAAGCCCAAGAACAAAAACAGGGGATTATGGGAAATTACGAAAATACTCCGTTTGGGTTACACGCGGAATTGGGCGTTGAGGAAGAAGTATGGGCGTCGCAACAAATCCAAGAATTGGACTCTTTTTCTTGCAATTATAATGCGAATCAATTCTGTGAAGTGGGAGATAATTGGAGCTCATTCGACTTTGCAGCCGTAAATAATGTCGAATATTTCTAA

Coding sequence (CDS)

ATGTCCGACCACCACCAGCTCCCTCCTCCACCTCCGCCGCCGTTCGCCTCCCATCTCGAGCGGAAATGGAAGCCTCATCTCGAAACAGCTCCAAATTGCCCTCGTTGCGCCTCCGCCAATACCAAATTCTGTTATTACAACAACTACAGCCTCTCCCAACCTAGATACTTTTGTAAATCCTGTCGACGCTATTGGACCAAAGGCGGTTCCCTCCGTAACGTCCCTGTCGGCGGTGGCTGTCGTAAGAGTCGTCGTACCAGGTCCTCACGATCCTCAACTGTCTCACGTTCTACCAACCCCAACACTTGTACACAAATCACTGAATCCTCCTCTAATGGACCCGATATCGATCTTGCTGCCGTTTTCGCTAGATATTTGAACACCGCCCCACCAAGTACTGAGGCACACGCGTTGACCAGCTCGCCCGAATCCGTTGACCCTTTAGAGAATTGTGAAATCTTGTTTGAAGGGCTGTCGGATTTGTTAATTGAGGAGGAAAATCAAGCCCAAGAACAAAAACAGGGGATTATGGGAAATTACGAAAATACTCCGTTTGGGTTACACGCGGAATTGGGCGTTGAGGAAGAAGTATGGGCGTCGCAACAAATCCAAGAATTGGACTCTTTTTCTTGCAATTATAATGCGAATCAATTCTGTGAAGTGGGAGATAATTGGAGCTCATTCGACTTTGCAGCCGTAAATAATGTCGAATATTTCTAA

Protein sequence

MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLAAVFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNYENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF
Homology
[Close]
BLAST of Cp4.1LG13g04090 vs. Swiss-Prot
Match: DOF12_ARATH (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.7e-33
Identity = 102/252 (40.48%), Postives = 131/252 (51.98%), Query Frame = 1 

Query: 5   HQLPPPPPPPFASHLERKWKPHLE----TAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 64
           HQ P P        +  KWK   E    TAP CPRCAS+NTKFCYYNNYSLSQPRYFCK 
Sbjct: 13  HQFPLPE-----MEIPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKG 72

Query: 65  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTN-PNTCTQIT---ESSSNGPDI 124
           CRRYWTKGGSLRN+PVGGGCRK  R+R +      R+ N P+         +SS  G DI
Sbjct: 73  CRRYWTKGGSLRNIPVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDI 132

Query: 125 DLAAVFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEEN--------- 184
           DLAAVFA+Y+    PS+  +   S  +S  P+       E LS  + +E +         
Sbjct: 133 DLAAVFAQYVTDRSPSSTDNTTGSDQDS--PITTTTHALESLSWDICQETDVDLGFYGEF 192

Query: 185 ----QAQEQKQGIMGNYENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQ------ 230
               Q  ++ Q + G +         E+   + +   ++IQE+   S +   +Q      
Sbjct: 193 NNLTQKTKEDQEVFGQFLQED---REEIFEFQGLLDDKEIQEILECSFSEEPDQLVSQGS 252

[Close]
BLAST of Cp4.1LG13g04090 vs. Swiss-Prot
Match: DOF35_ARATH (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.9e-32
Identity = 71/116 (61.21%), Postives = 82/116 (70.69%), Query Frame = 1 

Query: 23  WKPHL----ETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 82
           W+P+     E  P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 83  GCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSN----GPDIDLAAVFARYLNTAP 131
           GCRKSRR +SS  +        NT T +T +S N     P IDLA V+A +LN  P
Sbjct: 73  GCRKSRRPKSSSGN--------NTKTSLTANSGNPGGGSPSIDLALVYANFLNPKP 120

[Close]
BLAST of Cp4.1LG13g04090 vs. Swiss-Prot
Match: DOF18_ARATH (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-26
Identity = 57/88 (64.77%), Postives = 70/88 (79.55%), Query Frame = 1 

Query: 12  PPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSL 71
           PP  A+ +ERK +P  + A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT GGSL
Sbjct: 30  PPSPATPVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSL 89

Query: 72  RNVPVGGGCRKSRRTRSSRSSTVSRSTN 100
           RN+PVGGG RK++R+ S+ SS+   S++
Sbjct: 90  RNIPVGGGVRKNKRSSSNSSSSSPSSSS 117

[Close]
BLAST of Cp4.1LG13g04090 vs. Swiss-Prot
Match: DOF46_ARATH (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25
Identity = 62/105 (59.05%), Postives = 74/105 (70.48%), Query Frame = 1 

Query: 7   LPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWT 66
           L P  PP      ERK +P  + A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT
Sbjct: 31  LQPQQPPSVGG--ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWT 90

Query: 67  KGGSLRNVPVGGGCRKSRRTRSSR---SSTVSRSTNPNTCTQITE 109
           +GGSLRN+PVGGG RK++R+ SS    S+  S ST P T   +++
Sbjct: 91  EGGSLRNIPVGGGSRKNKRSHSSSSDISNNHSDSTQPATKKHLSD 133

[Close]
BLAST of Cp4.1LG13g04090 vs. Swiss-Prot
Match: DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.8e-25
Identity = 69/139 (49.64%), Postives = 87/139 (62.59%), Query Frame = 1 

Query: 3   DHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCR 62
           D+ Q  P P    A+ + R   P L  A  CPRC S NTKFCYYNNYSL+QPRYFCKSCR
Sbjct: 33  DNDQKKPSP----ATAVTRPQPPEL--ALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCR 92

Query: 63  RYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESS------SNGPDI 122
           RYWTKGG+LRN+PVGGGCRK++R+ SS + ++  +  P +      S+      SN   I
Sbjct: 93  RYWTKGGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHI 152

Query: 123 DLAAVFARYLNTAPPSTEA 136
           DL+  FA  LN   P + +
Sbjct: 153 DLSLAFA-LLNKQHPGSSS 164

[Close]
BLAST of Cp4.1LG13g04090 vs. TrEMBL
Match: A0A0A0KGG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G338090 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.2e-98
Identity = 183/249 (73.49%), Postives = 206/249 (82.73%), Query Frame = 1 

Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDH QLPPP PPPF SHL+RKWKPHLE APNCPRCAS NTKFCYYNNYSLSQPRYFCKS
Sbjct: 6   MSDHQQLPPP-PPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKS 65

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRR +SS+SS +SR + P+  +Q T+SSS+  DIDLAA
Sbjct: 66  CRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDIDLAA 125

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNY 180
           VFAR+LN+ P       LTSSPESVDPLE  EI  EGLSD+L+++ENQ +E+KQGI G+Y
Sbjct: 126 VFARFLNSEP-----QTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSY 185

Query: 181 ENTPFGLHAELGVEEEVWAS----QQIQELDSFSCNYNAN------QFCEVGDNWSSFDF 240
           EN  FGL  ELG++EEVWAS    +Q+QELDSFSCNY AN      QFC+VGDNWSSFDF
Sbjct: 186 ENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDF 245

[Close]
BLAST of Cp4.1LG13g04090 vs. TrEMBL
Match: A0A067L3I5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25217 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.9e-42
Identity = 109/225 (48.44%), Postives = 140/225 (62.22%), Query Frame = 1 

Query: 5   HQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRY 64
           HQ    P P     +ERKWK H+E APNCPRCAS NTKFCYYNNYSLSQPRYFCK+CRRY
Sbjct: 10  HQYSSRPLP-----MERKWKSHVELAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRY 69

Query: 65  WTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQ-ITESS----------SNG 124
           WTKGGSLRNVPVGGGCRK+RR ++ R+S   R  + N  ++ +T SS          SNG
Sbjct: 70  WTKGGSLRNVPVGGGCRKTRRAKAVRASQTDRVVSLNNYSRDLTSSSVDSFTQENQTSNG 129

Query: 125 PDIDLAAVFARYLN---TAPPSTEAHALTSSPESV-DPLENCEILFEGLSDLLIEEENQA 184
            DIDLA VFA++LN   +  P+  +++LT   E V D ++  +   EGL  +L+ E+ Q 
Sbjct: 130 SDIDLAVVFAKFLNQDSSVNPNEFSNSLTVEKEKVSDLIQESDDFLEGLPPVLLVEDGQQ 189

Query: 185 QEQK--QGIMGNYENTPFGLHAELG----VEEEVWASQQIQELDS 209
           + Q   Q  + + E   FGL   LG    V E +W+ Q+   L +
Sbjct: 190 ENQDSIQEFIESPEMDAFGLQTFLGDQEMVHEALWSDQEAATLSN 229

[Close]
BLAST of Cp4.1LG13g04090 vs. TrEMBL
Match: B9SJH7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0137680 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-38
Identity = 117/275 (42.55%), Postives = 145/275 (52.73%), Query Frame = 1 

Query: 19  LERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 78
           +E KWK H+E AP+CPRCAS+NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 11  MEGKWKTHVELAPSCPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGG 70

Query: 79  GCRKSRRTRSSRS--------------STVSRSTNPNTCTQITESSSNGPDIDLAAVFAR 138
           GCRKSRR +SSR               S  S S+N ++  Q T S+++G +IDLA VFA+
Sbjct: 71  GCRKSRRAKSSRGAVSMNYGKNFNGPLSGSSCSSNMDSTVQETGSNNDGSEIDLAVVFAK 130

Query: 139 YLN------------TAPPSTEAHALTS-----SPESVDPLENCEILF-------EGLSD 198
           +LN              P       L S     SP   D +  C+ L          L  
Sbjct: 131 FLNQESSFQPEFVGKELPDEPSDQELVSVANSLSPPDSDAVIECQNLIGESIQESNDLLQ 190

Query: 199 LLIEEENQAQEQ--KQGIMGNYENTPFGLHAELG---VEEEVWASQ-------------- 233
            L+   NQ QEQ  ++ IM + +   FGL   LG   V++ +W+                
Sbjct: 191 ALLVAGNQDQEQGDQEMIMESQDMNEFGLQTLLGDEIVQDALWSEAETSLSNVTWQIPVD 250

[Close]
BLAST of Cp4.1LG13g04090 vs. TrEMBL
Match: A0A0D2N9D0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G081000 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.5e-38
Identity = 100/232 (43.10%), Postives = 131/232 (56.47%), Query Frame = 1 

Query: 19  LERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 78
           +ERKWK ++ETAPNCPRCASANTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 20  IERKWKSNVETAPNCPRCASANTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGG 79

Query: 79  GCRKSRRTRSSRS-----STVSRSTNPNTCTQITESSSNGPDIDLAAVFARYLN----TA 138
           GCRKSRR +S R        +S + + N+ +     S N PDIDLA VFA++LN      
Sbjct: 80  GCRKSRRGKSRRERVEKRDQISMTDSKNSTSSSDGDSGNQPDIDLALVFAKFLNHNTSFD 139

Query: 139 PPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNYENTPFGLHA 198
            P  +  A   SP   +  +   +     S +L E    +Q +  G+          LH 
Sbjct: 140 QPEVDEIATQESPNEENNSQKPVVGSIPGSYILQEMPETSQMEAFGLQNLLTGDEMVLHE 199

Query: 199 ELGVEEEVWASQ---------QIQELDSFSCNYNANQFCE-VGDNWSSFDFA 232
           +L  + +V  +          Q+Q+ +SF  +         + ++W SFD +
Sbjct: 200 DLWSDHDVATTTPDMEWQPLVQLQQYESFPVDEQLKVSANLMNEDWGSFDLS 251

[Close]
BLAST of Cp4.1LG13g04090 vs. TrEMBL
Match: V4SJ04_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002179mg PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.1e-37
Identity = 107/255 (41.96%), Postives = 144/255 (56.47%), Query Frame = 1 

Query: 19  LERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 78
           +E+KWKP +ETAP+CPRCAS NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRNVP+GG
Sbjct: 1   MEKKWKPDVETAPSCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPMGG 60

Query: 79  GCRKSRRTRSSRSSTVSRSTNPN-TCT-----QITESSSNGPDIDLAAVFARYLNTAPPS 138
           GCRK+RR +SSR  +   +  P  +C+         + + G DIDLA VFA++LN +  S
Sbjct: 61  GCRKNRRVKSSRRKSPFNNDRPKASCSSDHTDDAVSTPNGGSDIDLAVVFAKFLNESSSS 120

Query: 139 TEAH------ALTSSPESV---DPLENCEILFEGLSDLLIEEE---NQAQEQK----QGI 198
            E        + +S+P++V   D      ++  G  ++L E      Q QE++    Q  
Sbjct: 121 QETDLSAAKTSNSSTPDNVVQNDDFNVHNVMGNGDLNMLGEFPQVFGQLQEEEDRRVQDF 180

Query: 199 MGNYENTPFGLHAELG---VEEEV--WASQ----------------QIQELDSFSCNYNA 230
           + +      GL A LG   V+ +V  W+ Q                Q+Q+ DSF  +   
Sbjct: 181 LEDDMVNAHGLQALLGDEIVDHQVALWSDQAETETLPNFTWQRAMFQLQDFDSFPADDQL 240

[Close]
BLAST of Cp4.1LG13g04090 vs. TAIR10
Match: AT1G21340.1 (AT1G21340.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 143.7 bits (361), Expect = 1.5e-34
Identity = 102/252 (40.48%), Postives = 131/252 (51.98%), Query Frame = 1 

Query: 5   HQLPPPPPPPFASHLERKWKPHLE----TAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 64
           HQ P P        +  KWK   E    TAP CPRCAS+NTKFCYYNNYSLSQPRYFCK 
Sbjct: 13  HQFPLPE-----MEIPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKG 72

Query: 65  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTN-PNTCTQIT---ESSSNGPDI 124
           CRRYWTKGGSLRN+PVGGGCRK  R+R +      R+ N P+         +SS  G DI
Sbjct: 73  CRRYWTKGGSLRNIPVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDI 132

Query: 125 DLAAVFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEEN--------- 184
           DLAAVFA+Y+    PS+  +   S  +S  P+       E LS  + +E +         
Sbjct: 133 DLAAVFAQYVTDRSPSSTDNTTGSDQDS--PITTTTHALESLSWDICQETDVDLGFYGEF 192

Query: 185 ----QAQEQKQGIMGNYENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQ------ 230
               Q  ++ Q + G +         E+   + +   ++IQE+   S +   +Q      
Sbjct: 193 NNLTQKTKEDQEVFGQFLQED---REEIFEFQGLLDDKEIQEILECSFSEEPDQLVSQGS 252

[Close]
BLAST of Cp4.1LG13g04090 vs. TAIR10
Match: AT3G52440.1 (AT3G52440.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-33
Identity = 71/116 (61.21%), Postives = 82/116 (70.69%), Query Frame = 1 

Query: 23  WKPHL----ETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 82
           W+P+     E  P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 83  GCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSN----GPDIDLAAVFARYLNTAP 131
           GCRKSRR +SS  +        NT T +T +S N     P IDLA V+A +LN  P
Sbjct: 73  GCRKSRRPKSSSGN--------NTKTSLTANSGNPGGGSPSIDLALVYANFLNPKP 120

[Close]
BLAST of Cp4.1LG13g04090 vs. TAIR10
Match: AT1G64620.1 (AT1G64620.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 121.3 bits (303), Expect = 8.0e-28
Identity = 57/88 (64.77%), Postives = 70/88 (79.55%), Query Frame = 1 

Query: 12  PPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSL 71
           PP  A+ +ERK +P  + A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT GGSL
Sbjct: 30  PPSPATPVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSL 89

Query: 72  RNVPVGGGCRKSRRTRSSRSSTVSRSTN 100
           RN+PVGGG RK++R+ S+ SS+   S++
Sbjct: 90  RNIPVGGGVRKNKRSSSNSSSSSPSSSS 117

[Close]
BLAST of Cp4.1LG13g04090 vs. TAIR10
Match: AT4G24060.1 (AT4G24060.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 118.2 bits (295), Expect = 6.8e-27
Identity = 62/105 (59.05%), Postives = 74/105 (70.48%), Query Frame = 1 

Query: 7   LPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWT 66
           L P  PP      ERK +P  + A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT
Sbjct: 31  LQPQQPPSVGG--ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWT 90

Query: 67  KGGSLRNVPVGGGCRKSRRTRSSR---SSTVSRSTNPNTCTQITE 109
           +GGSLRN+PVGGG RK++R+ SS    S+  S ST P T   +++
Sbjct: 91  EGGSLRNIPVGGGSRKNKRSHSSSSDISNNHSDSTQPATKKHLSD 133

[Close]
BLAST of Cp4.1LG13g04090 vs. TAIR10
Match: AT5G60200.1 (AT5G60200.1 TARGET OF MONOPTEROS 6)

HSP 1 Score: 115.5 bits (288), Expect = 4.4e-26
Identity = 69/139 (49.64%), Postives = 87/139 (62.59%), Query Frame = 1 

Query: 3   DHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCR 62
           D+ Q  P P    A+ + R   P L  A  CPRC S NTKFCYYNNYSL+QPRYFCKSCR
Sbjct: 33  DNDQKKPSP----ATAVTRPQPPEL--ALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCR 92

Query: 63  RYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESS------SNGPDI 122
           RYWTKGG+LRN+PVGGGCRK++R+ SS + ++  +  P +      S+      SN   I
Sbjct: 93  RYWTKGGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHI 152

Query: 123 DLAAVFARYLNTAPPSTEA 136
           DL+  FA  LN   P + +
Sbjct: 153 DLSLAFA-LLNKQHPGSSS 164

[Close]
BLAST of Cp4.1LG13g04090 vs. NCBI nr
Match: gi|659081848|ref|XP_008441540.1| (PREDICTED: dof zinc finger protein DOF1.2 [Cucumis melo])

HSP 1 Score: 373.2 bits (957), Expect = 3.3e-100
Identity = 189/249 (75.90%), Postives = 207/249 (83.13%), Query Frame = 1 

Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDHHQLPPP PPPF SHLERKWKPHLETAPNCPRCAS NTKFCYYNNYSLSQPRYFCKS
Sbjct: 6   MSDHHQLPPP-PPPFPSHLERKWKPHLETAPNCPRCASTNTKFCYYNNYSLSQPRYFCKS 65

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRR +SS+SS +SR + P+  +Q T+SSS+  DIDLAA
Sbjct: 66  CRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSPISRPSKPDLSSQTTDSSSSASDIDLAA 125

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNY 180
           VFAR+LN+ P      ALTSSPESVDPLE  EI  EGLSDLL+E+ENQ +E KQGI GN+
Sbjct: 126 VFARFLNSEP-----QALTSSPESVDPLEISEIFLEGLSDLLLEDENQREEGKQGIPGNH 185

Query: 181 ENTPFGLHAELGVEEEVWASQ----QIQELDSFSCNYNAN------QFCEVGDNWSSFDF 240
           EN  FGL  ELG++EEVWASQ    Q+QELDSFSCNY AN      Q C+VGDNWSSFDF
Sbjct: 186 ENVSFGLETELGIDEEVWASQEMQEQVQELDSFSCNYYANDLRVSDQLCQVGDNWSSFDF 245

[Close]
BLAST of Cp4.1LG13g04090 vs. NCBI nr
Match: gi|778714878|ref|XP_004148826.2| (PREDICTED: dof zinc finger protein DOF1.2 [Cucumis sativus])

HSP 1 Score: 366.7 bits (940), Expect = 3.1e-98
Identity = 183/249 (73.49%), Postives = 206/249 (82.73%), Query Frame = 1 

Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDH QLPPP PPPF SHL+RKWKPHLE APNCPRCAS NTKFCYYNNYSLSQPRYFCKS
Sbjct: 6   MSDHQQLPPP-PPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKS 65

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRR +SS+SS +SR + P+  +Q T+SSS+  DIDLAA
Sbjct: 66  CRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDIDLAA 125

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNY 180
           VFAR+LN+ P       LTSSPESVDPLE  EI  EGLSD+L+++ENQ +E+KQGI G+Y
Sbjct: 126 VFARFLNSEP-----QTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSY 185

Query: 181 ENTPFGLHAELGVEEEVWAS----QQIQELDSFSCNYNAN------QFCEVGDNWSSFDF 240
           EN  FGL  ELG++EEVWAS    +Q+QELDSFSCNY AN      QFC+VGDNWSSFDF
Sbjct: 186 ENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDF 245

[Close]
BLAST of Cp4.1LG13g04090 vs. NCBI nr
Match: gi|802559213|ref|XP_012066060.1| (PREDICTED: dof zinc finger protein DOF1.2 [Jatropha curcas])

HSP 1 Score: 180.3 bits (456), Expect = 4.1e-42
Identity = 109/225 (48.44%), Postives = 140/225 (62.22%), Query Frame = 1 

Query: 5   HQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRY 64
           HQ    P P     +ERKWK H+E APNCPRCAS NTKFCYYNNYSLSQPRYFCK+CRRY
Sbjct: 10  HQYSSRPLP-----MERKWKSHVELAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRY 69

Query: 65  WTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQ-ITESS----------SNG 124
           WTKGGSLRNVPVGGGCRK+RR ++ R+S   R  + N  ++ +T SS          SNG
Sbjct: 70  WTKGGSLRNVPVGGGCRKTRRAKAVRASQTDRVVSLNNYSRDLTSSSVDSFTQENQTSNG 129

Query: 125 PDIDLAAVFARYLN---TAPPSTEAHALTSSPESV-DPLENCEILFEGLSDLLIEEENQA 184
            DIDLA VFA++LN   +  P+  +++LT   E V D ++  +   EGL  +L+ E+ Q 
Sbjct: 130 SDIDLAVVFAKFLNQDSSVNPNEFSNSLTVEKEKVSDLIQESDDFLEGLPPVLLVEDGQQ 189

Query: 185 QEQK--QGIMGNYENTPFGLHAELG----VEEEVWASQQIQELDS 209
           + Q   Q  + + E   FGL   LG    V E +W+ Q+   L +
Sbjct: 190 ENQDSIQEFIESPEMDAFGLQTFLGDQEMVHEALWSDQEAATLSN 229

[Close]
BLAST of Cp4.1LG13g04090 vs. NCBI nr
Match: gi|470112641|ref|XP_004292540.1| (PREDICTED: dof zinc finger protein DOF1.2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 172.2 bits (435), Expect = 1.1e-39
Identity = 113/269 (42.01%), Postives = 146/269 (54.28%), Query Frame = 1 

Query: 23  WKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRK 82
           WKPH+E APNCPRCAS+NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRNVPVGGGCRK
Sbjct: 28  WKPHVEIAPNCPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRK 87

Query: 83  SRRTRSSRSSTVSR------------STNPNTCTQITESSSNGPDIDLAAVFARYLN--- 142
           +RR+RS+R S   R            S+  +   Q ++  +NG DID+AAVFA +LN   
Sbjct: 88  NRRSRSARLSQADRISMSYYRRNSSSSSGDDLSEQHSKEGANGSDIDMAAVFANFLNQNS 147

Query: 143 ------------TAPPST-EAHALTS-SPESVDPLENCEILFEGLSDLLIEEENQAQEQK 202
                       + P    EA+AL+  S  S++P E+     E L  L++ + +  Q  +
Sbjct: 148 CNGHDPNLVGSESIPDDVHEANALSDHSQNSLNPAEDLLESVELLQGLVLPDHDHQQSHE 207

Query: 203 Q----GIMGNYEN------TPFGLHAELGVEEEVWASQQIQELDSFSCNYN----ANQFC 234
           +     +MGN++         FGL   L  E+  W S     L S + ++N     N F 
Sbjct: 208 EDNIHNVMGNHQYHQDLSIHEFGLQGLLDDEDVFW-SDTTASLTSSTTSFNWQELDNSFP 267

[Close]
BLAST of Cp4.1LG13g04090 vs. NCBI nr
Match: gi|223534523|gb|EEF36222.1| (hypothetical protein RCOM_0137680 [Ricinus communis])

HSP 1 Score: 168.3 bits (425), Expect = 1.6e-38
Identity = 117/275 (42.55%), Postives = 145/275 (52.73%), Query Frame = 1 

Query: 19  LERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 78
           +E KWK H+E AP+CPRCAS+NTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 11  MEGKWKTHVELAPSCPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGG 70

Query: 79  GCRKSRRTRSSRS--------------STVSRSTNPNTCTQITESSSNGPDIDLAAVFAR 138
           GCRKSRR +SSR               S  S S+N ++  Q T S+++G +IDLA VFA+
Sbjct: 71  GCRKSRRAKSSRGAVSMNYGKNFNGPLSGSSCSSNMDSTVQETGSNNDGSEIDLAVVFAK 130

Query: 139 YLN------------TAPPSTEAHALTS-----SPESVDPLENCEILF-------EGLSD 198
           +LN              P       L S     SP   D +  C+ L          L  
Sbjct: 131 FLNQESSFQPEFVGKELPDEPSDQELVSVANSLSPPDSDAVIECQNLIGESIQESNDLLQ 190

Query: 199 LLIEEENQAQEQ--KQGIMGNYENTPFGLHAELG---VEEEVWASQ-------------- 233
            L+   NQ QEQ  ++ IM + +   FGL   LG   V++ +W+                
Sbjct: 191 ALLVAGNQDQEQGDQEMIMESQDMNEFGLQTLLGDEIVQDALWSEAETSLSNVTWQIPVD 250

The following BLAST results are available for this feature:
BLAST of Cp4.1LG13g04090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DOF12_ARATH2.7e-3340.48Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2 PE=2 SV=1[more]
DOF35_ARATH2.9e-3261.21Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5 PE=3 SV=1[more]
DOF18_ARATH1.4e-2664.77Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8 PE=2 SV=1[more]
DOF46_ARATH1.2e-2559.05Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2[more]
DOF53_ARATH7.8e-2549.64Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1[more]
BLAST of Cp4.1LG13g04090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGG2_CUCSA2.2e-9873.49Uncharacterized protein OS=Cucumis sativus GN=Csa_6G338090 PE=4 SV=1[more]
A0A067L3I5_JATCU2.9e-4248.44Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25217 PE=4 SV=1[more]
B9SJH7_RICCO1.1e-3842.55Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0137680 PE=4 SV=1[more]
A0A0D2N9D0_GOSRA2.5e-3843.10Uncharacterized protein OS=Gossypium raimondii GN=B456_005G081000 PE=4 SV=1[more]
V4SJ04_9ROSI2.1e-3741.96Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002179mg PE=4 SV=1[more]
BLAST of Cp4.1LG13g04090 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G21340.11.5e-3440.48 Dof-type zinc finger DNA-binding family protein[more]
AT3G52440.11.7e-3361.21 Dof-type zinc finger DNA-binding family protein[more]
AT1G64620.18.0e-2864.77 Dof-type zinc finger DNA-binding family protein[more]
AT4G24060.16.8e-2759.05 Dof-type zinc finger DNA-binding family protein[more]
AT5G60200.14.4e-2649.64 TARGET OF MONOPTEROS 6[more]
BLAST of Cp4.1LG13g04090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659081848|ref|XP_008441540.1|3.3e-10075.90PREDICTED: dof zinc finger protein DOF1.2 [Cucumis melo][more]
gi|778714878|ref|XP_004148826.2|3.1e-9873.49PREDICTED: dof zinc finger protein DOF1.2 [Cucumis sativus][more]
gi|802559213|ref|XP_012066060.1|4.1e-4248.44PREDICTED: dof zinc finger protein DOF1.2 [Jatropha curcas][more]
gi|470112641|ref|XP_004292540.1|1.1e-3942.01PREDICTED: dof zinc finger protein DOF1.2 [Fragaria vesca subsp. vesca][more]
gi|223534523|gb|EEF36222.1|1.6e-3842.55hypothetical protein RCOM_0137680 [Ricinus communis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g04090.1Cp4.1LG13g04090.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG13g04090Cucsa.077010Cucumber (Gy14) v1cgycpeB0127
Cp4.1LG13g04090CmaCh15G006190Cucurbita maxima (Rimu)cmacpeB305
Cp4.1LG13g04090CmaCh04G024290Cucurbita maxima (Rimu)cmacpeB705
Cp4.1LG13g04090CmoCh04G025460Cucurbita moschata (Rifu)cmocpeB657
Cp4.1LG13g04090CmoCh15G006230Cucurbita moschata (Rifu)cmocpeB268
Cp4.1LG13g04090Cla013851Watermelon (97103) v1cpewmB170
Cp4.1LG13g04090Csa6G338090Cucumber (Chinese Long) v2cpecuB200
Cp4.1LG13g04090MELO3C008400Melon (DHL92) v3.5.1cpemeB168
Cp4.1LG13g04090ClCG08G006520Watermelon (Charleston Gray)cpewcgB180
Cp4.1LG13g04090CSPI06G18020Wild cucumber (PI 183967)cpecpiB201
Cp4.1LG13g04090Lsi08G005290Bottle gourd (USVL1VR-Ls)cpelsiB158
Cp4.1LG13g04090MELO3C008400.2Melon (DHL92) v3.6.1cpemedB200
Cp4.1LG13g04090CsaV3_6G030900Cucumber (Chinese Long) v3cpecucB0240
Cp4.1LG13g04090Bhi04G001409Wax gourdcpewgoB0252
Cp4.1LG13g04090CsGy6G017500Cucumber (Gy14) v2cgybcpeB743
Cp4.1LG13g04090Carg01588Silver-seed gourdcarcpeB1157
Cp4.1LG13g04090Carg15778Silver-seed gourdcarcpeB0095
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG13g04090Cp4.1LG01g20940Cucurbita pepo (Zucchini)cpecpeB199
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG13g04090Cucurbita pepo (Zucchini)cpecpeB228
Cp4.1LG13g04090Cucurbita moschata (Rifu)cmocpeB009
Cp4.1LG13g04090Cucumber (Gy14) v2cgybcpeB740
Cp4.1LG13g04090Cucumber (Chinese Long) v3cpecucB0237