Csa6G338090 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G338090
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionDof zinc finger protein; contains IPR003851 (Zinc finger, Dof-type)
LocationChr6 : 15439973 .. 15440821 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTATTCTCTCTCTTCTCTCTCTTTCTCATCATGTTCTCTCCACCAATGTCCGACCACCAACAACTCCCTCCTCCTCCCCCGCCATTCCCCTCCCATCTACAACGCAAATGGAAACCCCATCTCGAAGCAGCCCCAAATTGCCCCCGCTGCGCCTCCACAAACACTAAATTCTGCTATTACAACAACTACAGCCTCTCCCAACCCAGATACTTCTGTAAATCCTGTCGCCGCTACTGGACCAAAGGCGGCTCCCTCCGCAACGTCCCCGTCGGTGGTGGCTGCCGCAAGAGCCGCCGTGCCAAGTCCTCAAAATCCTCCGCCATCTCCCGTCCTTCAAAACCCGACCTTTCTTCCCAAACCACCGACTCCTCCTCCTCTGCCTCCGATATCGATCTCGCCGCTGTGTTCGCCCGATTTTTGAACAGTGAGCCTCAGACGTTGACTAGCTCGCCGGAATCGGTTGACCCATTGGAGATTTCCGAGATCTTCTTGGAAGGTCTCTCAGATATGCTATTGGACGATGAAAATCAAAGGGAAGAAGAAAAACAGGGGATCCCGGGAAGTTACGAGAATGTTTCATTTGGGTTAGAAACAGAGTTGGGGATTGATGAAGAAGTATGGGCGTCACCAGAAATGCAAGAACAAGTTCAAGAATTGGACTCATTTTCTTGCAATTACTATGCGAATGACTTGCGGGTTTCTGATCAGTTCTGTCAAGTGGGAGATAACTGGAGCTCATTCGACTTTGCAGCCGTAAATAATGTCGAATATTTTTAATATATATCGTTACATTCATATACATTTTTCATATTCTTCTGTGAAAGAAATTTATATAAACATATATATAT

mRNA sequence

ATGTTCTCTCCACCAATGTCCGACCACCAACAACTCCCTCCTCCTCCCCCGCCATTCCCCTCCCATCTACAACGCAAATGGAAACCCCATCTCGAAGCAGCCCCAAATTGCCCCCGCTGCGCCTCCACAAACACTAAATTCTGCTATTACAACAACTACAGCCTCTCCCAACCCAGATACTTCTGTAAATCCTGTCGCCGCTACTGGACCAAAGGCGGCTCCCTCCGCAACGTCCCCGTCGGTGGTGGCTGCCGCAAGAGCCGCCGTGCCAAGTCCTCAAAATCCTCCGCCATCTCCCGTCCTTCAAAACCCGACCTTTCTTCCCAAACCACCGACTCCTCCTCCTCTGCCTCCGATATCGATCTCGCCGCTGTGTTCGCCCGATTTTTGAACAGTGAGCCTCAGACGTTGACTAGCTCGCCGGAATCGGTTGACCCATTGGAGATTTCCGAGATCTTCTTGGAAGGTCTCTCAGATATGCTATTGGACGATGAAAATCAAAGGGAAGAAGAAAAACAGGGGATCCCGGGAAGTTACGAGAATGTTTCATTTGGGTTAGAAACAGAGTTGGGGATTGATGAAGAAGTATGGGCGTCACCAGAAATGCAAGAACAAGTTCAAGAATTGGACTCATTTTCTTGCAATTACTATGCGAATGACTTGCGGGTTTCTGATCAGTTCTGTCAAGTGGGAGATAACTGGAGCTCATTCGACTTTGCAGCCGTAAATAATGTCGAATATTTTTAA

Coding sequence (CDS)

ATGTTCTCTCCACCAATGTCCGACCACCAACAACTCCCTCCTCCTCCCCCGCCATTCCCCTCCCATCTACAACGCAAATGGAAACCCCATCTCGAAGCAGCCCCAAATTGCCCCCGCTGCGCCTCCACAAACACTAAATTCTGCTATTACAACAACTACAGCCTCTCCCAACCCAGATACTTCTGTAAATCCTGTCGCCGCTACTGGACCAAAGGCGGCTCCCTCCGCAACGTCCCCGTCGGTGGTGGCTGCCGCAAGAGCCGCCGTGCCAAGTCCTCAAAATCCTCCGCCATCTCCCGTCCTTCAAAACCCGACCTTTCTTCCCAAACCACCGACTCCTCCTCCTCTGCCTCCGATATCGATCTCGCCGCTGTGTTCGCCCGATTTTTGAACAGTGAGCCTCAGACGTTGACTAGCTCGCCGGAATCGGTTGACCCATTGGAGATTTCCGAGATCTTCTTGGAAGGTCTCTCAGATATGCTATTGGACGATGAAAATCAAAGGGAAGAAGAAAAACAGGGGATCCCGGGAAGTTACGAGAATGTTTCATTTGGGTTAGAAACAGAGTTGGGGATTGATGAAGAAGTATGGGCGTCACCAGAAATGCAAGAACAAGTTCAAGAATTGGACTCATTTTCTTGCAATTACTATGCGAATGACTTGCGGGTTTCTGATCAGTTCTGTCAAGTGGGAGATAACTGGAGCTCATTCGACTTTGCAGCCGTAAATAATGTCGAATATTTTTAA

Protein sequence

MFSPPMSDHQQLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDIDLAAVFARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFAAVNNVEYF*
Homology
[Close]
BLAST of Csa6G338090 vs. Swiss-Prot
Match: DOF12_ARATH (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 4.1e-37
Identity = 96/245 (39.18%), Postives = 127/245 (51.84%), Query Frame = 1 

Query: 11  QLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWT 70
           Q P P    P   +  ++     AP CPRCAS+NTKFCYYNNYSLSQPRYFCK CRRYWT
Sbjct: 14  QFPLPEMEIPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWT 73

Query: 71  KGGSLRNVPVGGGCRKSRRAKSSKSSAISR-PSKPDLSSQTTD---SSSSASDIDLAAVF 130
           KGGSLRN+PVGGGCRK  R++ +      R  ++PD      D   SS   SDIDLAAVF
Sbjct: 74  KGGSLRNIPVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDIDLAAVF 133

Query: 131 ARFLNSEPQTLTSSPESVD---PLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYENVS 190
           A+++     + T +    D   P+  +   LE LS     D  Q  +   G  G + N++
Sbjct: 134 AQYVTDRSPSSTDNTTGSDQDSPITTTTHALESLS----WDICQETDVDLGFYGEFNNLT 193

Query: 191 FGLETELGI--------DEEVWASPEM--QEQVQELDSFSCNYYANDLRVSDQFCQVGDN 239
              + +  +         EE++    +   +++QE+   S +   + L     F   GDN
Sbjct: 194 QKTKEDQEVFGQFLQEDREEIFEFQGLLDDKEIQEILECSFSEEPDQLVSQGSFMINGDN 253

[Close]
BLAST of Csa6G338090 vs. Swiss-Prot
Match: DOF35_ARATH (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.5e-34
Identity = 68/112 (60.71%), Postives = 80/112 (71.43%), Query Frame = 1 

Query: 27  WKPHLEA----APNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 86
           W+P+  A     P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 87  GCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDIDLAAVFARFLNSEP 135
           GCRKSRR KSS  +     +K  L++ + +    +  IDLA V+A FLN +P
Sbjct: 73  GCRKSRRPKSSSGN----NTKTSLTANSGNPGGGSPSIDLALVYANFLNPKP 120

[Close]
BLAST of Csa6G338090 vs. Swiss-Prot
Match: DOF46_ARATH (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-30
Identity = 68/134 (50.75%), Postives = 83/134 (61.94%), Query Frame = 1 

Query: 5   PMSDHQQLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKS 64
           P    Q L P  PP     +RK +P  + A NCPRC STNTKFCYYNNYSL+QPRYFCK 
Sbjct: 24  PKPQPQPLQPQQPPSVGG-ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKG 83

Query: 65  CRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDIDLAA 124
           CRRYWT+GGSLRN+PVGGG RK++R+ SS S         D+S+  +DS+  A+   L+ 
Sbjct: 84  CRRYWTEGGSLRNIPVGGGSRKNKRSHSSSS---------DISNNHSDSTQPATKKHLSD 143

Query: 125 VFARFLNSEPQTLT 139
                ++   Q LT
Sbjct: 144 HHHHLMSMSQQGLT 147

[Close]
BLAST of Csa6G338090 vs. Swiss-Prot
Match: DOF18_ARATH (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-29
Identity = 62/100 (62.00%), Postives = 71/100 (71.00%), Query Frame = 1 

Query: 10  QQLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYW 69
           QQ  PP P  P  ++RK +P  + A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYW
Sbjct: 26  QQSNPPSPATP--VERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYW 85

Query: 70  TKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQ 110
           T GGSLRN+PVGGG RK++R+ S+ SS  S PS    S +
Sbjct: 86  TAGGSLRNIPVGGGVRKNKRSSSNSSS--SSPSSSSSSKK 121

[Close]
BLAST of Csa6G338090 vs. Swiss-Prot
Match: DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.1e-29
Identity = 66/136 (48.53%), Postives = 83/136 (61.03%), Query Frame = 1 

Query: 5   PMSDHQQLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKS 64
           P+ + Q+ P P     + + R   P L  A  CPRC STNTKFCYYNNYSL+QPRYFCKS
Sbjct: 31  PLDNDQKKPSPA----TAVTRPQPPEL--ALRCPRCDSTNTKFCYYNNYSLTQPRYFCKS 90

Query: 65  CRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPD------LSSQTTDSSSSAS 124
           CRRYWTKGG+LRN+PVGGGCRK++R+ SS + ++    +P        S+   +  S+  
Sbjct: 91  CRRYWTKGGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEPASHDGKVFSAAGFNGYSNNE 150

Query: 125 DIDLAAVFARFLNSEP 135
            IDL+  FA      P
Sbjct: 151 HIDLSLAFALLNKQHP 160

[Close]
BLAST of Csa6G338090 vs. TrEMBL
Match: A0A0A0KGG2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G338090 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 6.0e-144
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 1 

Query: 1   MFSPPMSDHQQLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRY 60
           MFSPPMSDHQQLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRY
Sbjct: 1   MFSPPMSDHQQLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRY 60

Query: 61  FCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDI 120
           FCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDI
Sbjct: 61  FCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDI 120

Query: 121 DLAAVFARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYE 180
           DLAAVFARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYE
Sbjct: 121 DLAAVFARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYE 180

Query: 181 NVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFA 240
           NVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFA
Sbjct: 181 NVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFA 240

Query: 241 AVNNVEYF 249
           AVNNVEYF
Sbjct: 241 AVNNVEYF 248

[Close]
BLAST of Csa6G338090 vs. TrEMBL
Match: A0A067L3I5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25217 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.2e-48
Identity = 124/265 (46.79%), Postives = 156/265 (58.87%), Query Frame = 1 

Query: 20  PSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVP 79
           P  ++RKWK H+E APNCPRCASTNTKFCYYNNYSLSQPRYFCK+CRRYWTKGGSLRNVP
Sbjct: 16  PLPMERKWKSHVELAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVP 75

Query: 80  VGGGCRKSRRAKSSKSSAISR-----PSKPDLSSQTTDS------SSSASDIDLAAVFAR 139
           VGGGCRK+RRAK+ ++S   R         DL+S + DS      +S+ SDIDLA VFA+
Sbjct: 76  VGGGCRKTRRAKAVRASQTDRVVSLNNYSRDLTSSSVDSFTQENQTSNGSDIDLAVVFAK 135

Query: 140 FLNSE--------PQTLTSSPESV-DPLEISEIFLEGLSDMLLDDENQREEEK--QGIPG 199
           FLN +          +LT   E V D ++ S+ FLEGL  +LL ++ Q+E +   Q    
Sbjct: 136 FLNQDSSVNPNEFSNSLTVEKEKVSDLIQESDDFLEGLPPVLLVEDGQQENQDSIQEFIE 195

Query: 200 SYENVSFGLETELG----IDEEVWASPE-------------------MQEQVQELDSFSC 239
           S E  +FGL+T LG    + E +W+  E                    QE+ QE DSF+ 
Sbjct: 196 SPEMDAFGLQTFLGDQEMVHEALWSDQEAATLSNVLTWESTLLQQQQQQERTQEFDSFTV 255

[Close]
BLAST of Csa6G338090 vs. TrEMBL
Match: A0A0D2N9D0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G081000 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.6e-43
Identity = 111/260 (42.69%), Postives = 147/260 (56.54%), Query Frame = 1 

Query: 11  QLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWT 70
           Q  P  P  P  ++RKWK ++E APNCPRCAS NTKFCYYNNYSLSQPRYFCK CRRYWT
Sbjct: 10  QSDPRVPILP--IERKWKSNVETAPNCPRCASANTKFCYYNNYSLSQPRYFCKGCRRYWT 69

Query: 71  KGGSLRNVPVGGGCRKSRRAKS-----SKSSAISRPSKPDLSSQTTDSSSSASDIDLAAV 130
           KGGSLRNVPVGGGCRKSRR KS      K   IS     + +S +   S +  DIDLA V
Sbjct: 70  KGGSLRNVPVGGGCRKSRRGKSRRERVEKRDQISMTDSKNSTSSSDGDSGNQPDIDLALV 129

Query: 131 FARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSY------ 190
           FA+FLN           S D  E+ EI  +   +   ++ N ++     IPGSY      
Sbjct: 130 FAKFLNHN--------TSFDQPEVDEIATQESPN---EENNSQKPVVGSIPGSYILQEMP 189

Query: 191 ---ENVSFGLET-----ELGIDEEVWA-------SPEMQ----EQVQELDSFSCNYYAND 241
              +  +FGL+      E+ + E++W+       +P+M+     Q+Q+ +SF  +     
Sbjct: 190 ETSQMEAFGLQNLLTGDEMVLHEDLWSDHDVATTTPDMEWQPLVQLQQYESFPVD---EQ 249

[Close]
BLAST of Csa6G338090 vs. TrEMBL
Match: K7KLZ8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G239500 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.3e-41
Identity = 108/260 (41.54%), Postives = 143/260 (55.00%), Query Frame = 1 

Query: 18  PFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRN 77
           P     + +WKP +E APNCPRCASTNTKFCYYNNYSLSQPRYFCK CRRYWTKGGSLRN
Sbjct: 27  PMEEQQRSRWKPSVEVAPNCPRCASTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRN 86

Query: 78  VPVGGGCRKSRRAKSSKSSAISRPS-KPDLSSQTTDSSS----------SASDIDLAAVF 137
           VPVGGGCRK+RR KSS SS +   S +   S + T+SSS           + DID+A VF
Sbjct: 87  VPVGGGCRKNRRGKSSSSSRLQHQSHQRAFSCENTESSSVGDDAQQNNNVSRDIDMALVF 146

Query: 138 ARFLNSEPQT---LTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYENVS 197
           A+FLN +P T      SP S + L    + +E  +D ++  +N+   +   +    EN+S
Sbjct: 147 AKFLNPKPTTGEDNNGSPSSNNYLTPESVEIE--NDAVVQSQNKASSDPVIVES--ENLS 206

Query: 198 F----GLETELGI---DEEVWASPEMQEQVQELDSFSCNYYANDLRV--SDQFCQV---- 244
                 LE  LG+   ++ +W+   +   V        + Y+  L     DQ   +    
Sbjct: 207 LVEIDELERLLGVCGDEDGLWSDATLSSSVTWEPPLKESEYSMPLNEDDGDQLLPIIISA 266

[Close]
BLAST of Csa6G338090 vs. TrEMBL
Match: K7KUP9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G124300 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.3e-41
Identity = 109/266 (40.98%), Postives = 142/266 (53.38%), Query Frame = 1 

Query: 16  PPPFPSHLQR-KWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGS 75
           P P     QR +WKP +E APNCPRCASTNTKFCYYNNYSLSQPRYFCK CRRYWTKGGS
Sbjct: 25  PSPMEQQQQRSRWKPSVEVAPNCPRCASTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGS 84

Query: 76  LRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSS--------ASDIDLAAVF 135
           LRNVPVGGGCRK+RR KS +SS+  +       S  T+SS S        + DID+A VF
Sbjct: 85  LRNVPVGGGCRKNRRGKSLQSSSSRQQRASSFVSGDTESSFSDAQQINNGSRDIDMALVF 144

Query: 136 ARFLNSEPQT--------LTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGS 195
           A+FLN +P T         TS+  + + +EI        +D ++  +N+   +   +   
Sbjct: 145 AKFLNPKPTTGEDNNGSSSTSNNFTPESVEIE-------NDAVVQSQNKASSDPVIVES- 204

Query: 196 YENVSFG----LETELGI---DEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQV- 243
            EN+S G    LE  LG+   ++ +W+   +   V          Y+  L   D   Q+ 
Sbjct: 205 -ENLSLGEIDELERLLGVCGDEDGLWSDATLSSSVTWEPPLKELEYSMPLNEDDDDAQLL 264

[Close]
BLAST of Csa6G338090 vs. TAIR10
Match: AT1G21340.1 (AT1G21340.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 156.4 bits (394), Expect = 2.3e-38
Identity = 96/245 (39.18%), Postives = 127/245 (51.84%), Query Frame = 1 

Query: 11  QLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWT 70
           Q P P    P   +  ++     AP CPRCAS+NTKFCYYNNYSLSQPRYFCK CRRYWT
Sbjct: 14  QFPLPEMEIPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWT 73

Query: 71  KGGSLRNVPVGGGCRKSRRAKSSKSSAISR-PSKPDLSSQTTD---SSSSASDIDLAAVF 130
           KGGSLRN+PVGGGCRK  R++ +      R  ++PD      D   SS   SDIDLAAVF
Sbjct: 74  KGGSLRNIPVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDIDLAAVF 133

Query: 131 ARFLNSEPQTLTSSPESVD---PLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYENVS 190
           A+++     + T +    D   P+  +   LE LS     D  Q  +   G  G + N++
Sbjct: 134 AQYVTDRSPSSTDNTTGSDQDSPITTTTHALESLS----WDICQETDVDLGFYGEFNNLT 193

Query: 191 FGLETELGI--------DEEVWASPEM--QEQVQELDSFSCNYYANDLRVSDQFCQVGDN 239
              + +  +         EE++    +   +++QE+   S +   + L     F   GDN
Sbjct: 194 QKTKEDQEVFGQFLQEDREEIFEFQGLLDDKEIQEILECSFSEEPDQLVSQGSFMINGDN 253

[Close]
BLAST of Csa6G338090 vs. TAIR10
Match: AT3G52440.1 (AT3G52440.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 147.1 bits (370), Expect = 1.4e-35
Identity = 68/112 (60.71%), Postives = 80/112 (71.43%), Query Frame = 1 

Query: 27  WKPHLEA----APNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 86
           W+P+  A     P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 87  GCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDIDLAAVFARFLNSEP 135
           GCRKSRR KSS  +     +K  L++ + +    +  IDLA V+A FLN +P
Sbjct: 73  GCRKSRRPKSSSGN----NTKTSLTANSGNPGGGSPSIDLALVYANFLNPKP 120

[Close]
BLAST of Csa6G338090 vs. TAIR10
Match: AT4G24060.1 (AT4G24060.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 134.4 bits (337), Expect = 9.5e-32
Identity = 68/134 (50.75%), Postives = 83/134 (61.94%), Query Frame = 1 

Query: 5   PMSDHQQLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKS 64
           P    Q L P  PP     +RK +P  + A NCPRC STNTKFCYYNNYSL+QPRYFCK 
Sbjct: 24  PKPQPQPLQPQQPPSVGG-ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKG 83

Query: 65  CRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDIDLAA 124
           CRRYWT+GGSLRN+PVGGG RK++R+ SS S         D+S+  +DS+  A+   L+ 
Sbjct: 84  CRRYWTEGGSLRNIPVGGGSRKNKRSHSSSS---------DISNNHSDSTQPATKKHLSD 143

Query: 125 VFARFLNSEPQTLT 139
                ++   Q LT
Sbjct: 144 HHHHLMSMSQQGLT 147

[Close]
BLAST of Csa6G338090 vs. TAIR10
Match: AT1G64620.1 (AT1G64620.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-30
Identity = 62/100 (62.00%), Postives = 71/100 (71.00%), Query Frame = 1 

Query: 10  QQLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYW 69
           QQ  PP P  P  ++RK +P  + A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYW
Sbjct: 26  QQSNPPSPATP--VERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYW 85

Query: 70  TKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQ 110
           T GGSLRN+PVGGG RK++R+ S+ SS  S PS    S +
Sbjct: 86  TAGGSLRNIPVGGGVRKNKRSSSNSSS--SSPSSSSSSKK 121

[Close]
BLAST of Csa6G338090 vs. TAIR10
Match: AT5G60200.1 (AT5G60200.1 TARGET OF MONOPTEROS 6)

HSP 1 Score: 129.0 bits (323), Expect = 4.0e-30
Identity = 66/136 (48.53%), Postives = 83/136 (61.03%), Query Frame = 1 

Query: 5   PMSDHQQLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKS 64
           P+ + Q+ P P     + + R   P L  A  CPRC STNTKFCYYNNYSL+QPRYFCKS
Sbjct: 31  PLDNDQKKPSPA----TAVTRPQPPEL--ALRCPRCDSTNTKFCYYNNYSLTQPRYFCKS 90

Query: 65  CRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPD------LSSQTTDSSSSAS 124
           CRRYWTKGG+LRN+PVGGGCRK++R+ SS + ++    +P        S+   +  S+  
Sbjct: 91  CRRYWTKGGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEPASHDGKVFSAAGFNGYSNNE 150

Query: 125 DIDLAAVFARFLNSEP 135
            IDL+  FA      P
Sbjct: 151 HIDLSLAFALLNKQHP 160

[Close]
BLAST of Csa6G338090 vs. NCBI nr
Match: gi|778714878|ref|XP_004148826.2| (PREDICTED: dof zinc finger protein DOF1.2 [Cucumis sativus])

HSP 1 Score: 518.1 bits (1333), Expect = 8.6e-144
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 1 

Query: 1   MFSPPMSDHQQLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRY 60
           MFSPPMSDHQQLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRY
Sbjct: 1   MFSPPMSDHQQLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRY 60

Query: 61  FCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDI 120
           FCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDI
Sbjct: 61  FCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDI 120

Query: 121 DLAAVFARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYE 180
           DLAAVFARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYE
Sbjct: 121 DLAAVFARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYE 180

Query: 181 NVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFA 240
           NVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFA
Sbjct: 181 NVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFA 240

Query: 241 AVNNVEYF 249
           AVNNVEYF
Sbjct: 241 AVNNVEYF 248

[Close]
BLAST of Csa6G338090 vs. NCBI nr
Match: gi|659081848|ref|XP_008441540.1| (PREDICTED: dof zinc finger protein DOF1.2 [Cucumis melo])

HSP 1 Score: 495.7 bits (1275), Expect = 4.6e-137
Identity = 236/248 (95.16%), Postives = 241/248 (97.18%), Query Frame = 1 

Query: 1   MFSPPMSDHQQLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRY 60
           MFSPPMSDH QLPPPPPPFPSHL+RKWKPHLE APNCPRCASTNTKFCYYNNYSLSQPRY
Sbjct: 1   MFSPPMSDHHQLPPPPPPFPSHLERKWKPHLETAPNCPRCASTNTKFCYYNNYSLSQPRY 60

Query: 61  FCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDI 120
           FCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSS ISRPSKPDLSSQTTDSSSSASDI
Sbjct: 61  FCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSPISRPSKPDLSSQTTDSSSSASDI 120

Query: 121 DLAAVFARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSYE 180
           DLAAVFARFLNSEPQ LTSSPESVDPLEISEIFLEGLSD+LL+DENQREE KQGIPG++E
Sbjct: 121 DLAAVFARFLNSEPQALTSSPESVDPLEISEIFLEGLSDLLLEDENQREEGKQGIPGNHE 180

Query: 181 NVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDFA 240
           NVSFGLETELGIDEEVWAS EMQEQVQELDSFSCNYYANDLRVSDQ CQVGDNWSSFDFA
Sbjct: 181 NVSFGLETELGIDEEVWASQEMQEQVQELDSFSCNYYANDLRVSDQLCQVGDNWSSFDFA 240

Query: 241 AVNNVEYF 249
           AVNNVEYF
Sbjct: 241 AVNNVEYF 248

[Close]
BLAST of Csa6G338090 vs. NCBI nr
Match: gi|802559213|ref|XP_012066060.1| (PREDICTED: dof zinc finger protein DOF1.2 [Jatropha curcas])

HSP 1 Score: 201.4 bits (511), Expect = 1.8e-48
Identity = 124/265 (46.79%), Postives = 156/265 (58.87%), Query Frame = 1 

Query: 20  PSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVP 79
           P  ++RKWK H+E APNCPRCASTNTKFCYYNNYSLSQPRYFCK+CRRYWTKGGSLRNVP
Sbjct: 16  PLPMERKWKSHVELAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVP 75

Query: 80  VGGGCRKSRRAKSSKSSAISR-----PSKPDLSSQTTDS------SSSASDIDLAAVFAR 139
           VGGGCRK+RRAK+ ++S   R         DL+S + DS      +S+ SDIDLA VFA+
Sbjct: 76  VGGGCRKTRRAKAVRASQTDRVVSLNNYSRDLTSSSVDSFTQENQTSNGSDIDLAVVFAK 135

Query: 140 FLNSE--------PQTLTSSPESV-DPLEISEIFLEGLSDMLLDDENQREEEK--QGIPG 199
           FLN +          +LT   E V D ++ S+ FLEGL  +LL ++ Q+E +   Q    
Sbjct: 136 FLNQDSSVNPNEFSNSLTVEKEKVSDLIQESDDFLEGLPPVLLVEDGQQENQDSIQEFIE 195

Query: 200 SYENVSFGLETELG----IDEEVWASPE-------------------MQEQVQELDSFSC 239
           S E  +FGL+T LG    + E +W+  E                    QE+ QE DSF+ 
Sbjct: 196 SPEMDAFGLQTFLGDQEMVHEALWSDQEAATLSNVLTWESTLLQQQQQQERTQEFDSFTV 255

[Close]
BLAST of Csa6G338090 vs. NCBI nr
Match: gi|823165012|ref|XP_012482447.1| (PREDICTED: dof zinc finger protein DOF3.5-like [Gossypium raimondii])

HSP 1 Score: 183.0 bits (463), Expect = 6.6e-43
Identity = 111/260 (42.69%), Postives = 147/260 (56.54%), Query Frame = 1 

Query: 11  QLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKSCRRYWT 70
           Q  P  P  P  ++RKWK ++E APNCPRCAS NTKFCYYNNYSLSQPRYFCK CRRYWT
Sbjct: 10  QSDPRVPILP--IERKWKSNVETAPNCPRCASANTKFCYYNNYSLSQPRYFCKGCRRYWT 69

Query: 71  KGGSLRNVPVGGGCRKSRRAKS-----SKSSAISRPSKPDLSSQTTDSSSSASDIDLAAV 130
           KGGSLRNVPVGGGCRKSRR KS      K   IS     + +S +   S +  DIDLA V
Sbjct: 70  KGGSLRNVPVGGGCRKSRRGKSRRERVEKRDQISMTDSKNSTSSSDGDSGNQPDIDLALV 129

Query: 131 FARFLNSEPQTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSY------ 190
           FA+FLN           S D  E+ EI  +   +   ++ N ++     IPGSY      
Sbjct: 130 FAKFLNHN--------TSFDQPEVDEIATQESPN---EENNSQKPVVGSIPGSYILQEMP 189

Query: 191 ---ENVSFGLET-----ELGIDEEVWA-------SPEMQ----EQVQELDSFSCNYYAND 241
              +  +FGL+      E+ + E++W+       +P+M+     Q+Q+ +SF  +     
Sbjct: 190 ETSQMEAFGLQNLLTGDEMVLHEDLWSDHDVATTTPDMEWQPLVQLQQYESFPVD---EQ 249

[Close]
BLAST of Csa6G338090 vs. NCBI nr
Match: gi|470112641|ref|XP_004292540.1| (PREDICTED: dof zinc finger protein DOF1.2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 179.9 bits (455), Expect = 5.6e-42
Identity = 120/300 (40.00%), Postives = 152/300 (50.67%), Query Frame = 1 

Query: 1   MFSPPMSDHQ-QLPPPPPPFPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPR 60
           MF+ P+ +   Q     P   +  +  WKPH+E APNCPRCAS+NTKFCYYNNYSLSQPR
Sbjct: 1   MFTAPVLEQMLQCQSGQPLIMNSQKPSWKPHVEIAPNCPRCASSNTKFCYYNNYSLSQPR 60

Query: 61  YFCKSCRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISR------------PSKPDLS 120
           YFCK CRRYWTKGGSLRNVPVGGGCRK+RR++S++ S   R             S  DLS
Sbjct: 61  YFCKGCRRYWTKGGSLRNVPVGGGCRKNRRSRSARLSQADRISMSYYRRNSSSSSGDDLS 120

Query: 121 SQTTDSSSSASDIDLAAVFARFLNS------EPQTLTS----------------SPESVD 180
            Q +   ++ SDID+AAVFA FLN       +P  + S                S  S++
Sbjct: 121 EQHSKEGANGSDIDMAAVFANFLNQNSCNGHDPNLVGSESIPDDVHEANALSDHSQNSLN 180

Query: 181 PLE---ISEIFLEGLSDMLLDDENQREEEKQGIPGSYEN---------VSFGLETELGID 240
           P E    S   L+GL  +L D ++Q+  E+  I     N           FGL+  L  D
Sbjct: 181 PAEDLLESVELLQGL--VLPDHDHQQSHEEDNIHNVMGNHQYHQDLSIHEFGLQGLLD-D 240

Query: 241 EEVWASPEMQEQVQELDSFSCNYYANDLRVSD-----------QFCQVGDNWSSFDFAAV 243
           E+V+ S           SF+     N     D             C   DNWSSFDF+ +
Sbjct: 241 EDVFWSDTTASLTSSTTSFNWQELDNSFPSDDDDHMKIPTTTTNLC--SDNWSSFDFSGL 295

The following BLAST results are available for this feature:
BLAST of Csa6G338090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DOF12_ARATH4.1e-3739.18Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2 PE=2 SV=1[more]
DOF35_ARATH2.5e-3460.71Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5 PE=3 SV=1[more]
DOF46_ARATH1.7e-3050.75Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2[more]
DOF18_ARATH1.9e-2962.00Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8 PE=2 SV=1[more]
DOF53_ARATH7.1e-2948.53Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1[more]
BLAST of Csa6G338090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGG2_CUCSA6.0e-144100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G338090 PE=4 SV=1[more]
A0A067L3I5_JATCU1.2e-4846.79Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25217 PE=4 SV=1[more]
A0A0D2N9D0_GOSRA4.6e-4342.69Uncharacterized protein OS=Gossypium raimondii GN=B456_005G081000 PE=4 SV=1[more]
K7KLZ8_SOYBN3.3e-4141.54Uncharacterized protein OS=Glycine max GN=GLYMA_04G239500 PE=4 SV=1[more]
K7KUP9_SOYBN4.3e-4140.98Uncharacterized protein OS=Glycine max GN=GLYMA_06G124300 PE=4 SV=1[more]
BLAST of Csa6G338090 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G21340.12.3e-3839.18 Dof-type zinc finger DNA-binding family protein[more]
AT3G52440.11.4e-3560.71 Dof-type zinc finger DNA-binding family protein[more]
AT4G24060.19.5e-3250.75 Dof-type zinc finger DNA-binding family protein[more]
AT1G64620.11.0e-3062.00 Dof-type zinc finger DNA-binding family protein[more]
AT5G60200.14.0e-3048.53 TARGET OF MONOPTEROS 6[more]
BLAST of Csa6G338090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778714878|ref|XP_004148826.2|8.6e-144100.00PREDICTED: dof zinc finger protein DOF1.2 [Cucumis sativus][more]
gi|659081848|ref|XP_008441540.1|4.6e-13795.16PREDICTED: dof zinc finger protein DOF1.2 [Cucumis melo][more]
gi|802559213|ref|XP_012066060.1|1.8e-4846.79PREDICTED: dof zinc finger protein DOF1.2 [Jatropha curcas][more]
gi|823165012|ref|XP_012482447.1|6.6e-4342.69PREDICTED: dof zinc finger protein DOF3.5-like [Gossypium raimondii][more]
gi|470112641|ref|XP_004292540.1|5.6e-4240.00PREDICTED: dof zinc finger protein DOF1.2 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU116980cucumber EST collection version 3.0transcribed_cluster
CU147047cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G338090.1Csa6G338090.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU147047CU147047transcribed_cluster
CU116980CU116980transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 23..84
score: 3.0
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 34..89
score: 1.3
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 37..73
scor
IPR003851Zinc finger, Dof-typePROFILEPS50884ZF_DOF_2coord: 35..89
score: 28
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 24..166
score: 1.8
NoneNo IPR availablePANTHERPTHR31992:SF8DOF ZINC FINGER PROTEIN DOF1.1-RELATEDcoord: 24..166
score: 1.8