Lsi05G000700 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCAGATACCTTCCCCAATTTCTGCTCCATCCTTCTTCTTCTTCTTCCTCCCTCTCTTTTCTCTCTGTTTCCCTCCATGAAATGGGACATGGAGATCGAGGAAATCGAGGCTGTCCTCGAGAAGATTTGGGACCTTCACGACAAGCTCAGTGAAGCAATTCACTCAATTTCCCGAGATCACTTCCTCACTTCCACCAAACATCTCAGGAAATCGGACAACAAGGATTCCAACAAGACCCCCAATGCCCTACCCGACACTGCTGTCTTCCCTTTCATTAATGAATTTCGGATCGACCTTGATGATTCTGCCATCCAGGAGGCCAGAAGTCTAAATTCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATGTATGTTCCTTTTTCTCCCCTATTTCCTGCGCCTTCTTTTAATTCACTCTTTTCTTTACTTTATCATTGTGTAATTTCAAGGTAGACACAACAGGACAACTTTTGTTTCGATCTTATTGGGGGTTTCATTATTACCCAAACAAACAGATTATGTACACATAGCTATGTTTGCGATTCAATTAGGTGATGTTTCTTGCTTTCCAGTAGGAATTAATTTGGTAATTTATGAATTTCTTTGTTTGCTGCTGTCTGGAAGACTGTATGGAAGAGTTCTATGTTCACTATTCTTTGGCTTCCTTGATTTTTGTTCTACGTCTTTGTCCAATTTGACTAAAGATGGGACGGAGTGCTAATTTCTTGTATCGACTGTTTACTTTGGTTTCTGGTTAGTGGAGGCTTGTATAAATTATGATTTCAGGGAGTCTTACAGGACTTTCCTTTTCATTTCTGAAATTAAGATTTCACTCTTAGTAGAATTAGGTTTACCATTTGTATGTCCATACAACCATAAAATTTTCTGCTTTGATGTTTGAATAAATGAAAATATGTAATCACACAAAACAAAACGGCTCTGTATATCTATTGAAAAAGATGAACAGATTCCTATCAAATTGTGAAAGAAATATTTTCGGTTCAATCATAGCGCCATTGGGGCGCCACTGAGTAATTGGCGACGTTTAATCCGTCCAGAATGGTTTCCATAAAACCAAGTTTTTTTCTTGTTTTCCTTTTTCTTTTTTTTGAAGAGTGAACTGCAATTTAGAACAATGGAAGATTTTCATTCCTACAGAAATCATGGCTTGAACCCTTATATATGTTAAACTCTACGAGTCATTCAGTGACTAGTTTTGAGAAGAGTTTCCTAAGCAATGGAAGGTCGGTTTTTTGTATGCTCTTGATTTCTTCTTTCATTTTTCTCAATGAAAGCTTGGTTTCTTGCAATTAAGAAAAAGAATGGACTTCTTATTAGTAGTACAAATTAAATATAGAGTCCGTAGCCTAGAGGACCTGCAACTTCATGTTCTACGCTTGGATGCATCGTTTTCAAATGAAAGCAGTAATGAGCTGCATTCTTATGTTCCTTCTCACTTTTGGGGTTATGATGATAAATATTTCATTGGAGAGAATAATATTTCTCAAATCTCGACAATTGACCACTGAATTCTTTCATTCTGTTTGCAGACGGTTCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCTTTAGCATTTGTTGGAGATGTACGTTATGCACCTAACTATGTTTCACACGAAAAGCAATATGGTCCCCAATTTAGCCCGAACAGTCAGAAGCCTATGCCGAACAGTTCAACGAGGTCTAATACTCTGATCAAGATGCTATTCTCAACTCTCAACTTTGCTAGGAAATCCCTCAAAATGGATCATGTGGGTGGGATACTTGGCAATGCTGCCTTGGTTGCAATTAGCATGCTAGCTTTCCTGCATCTGCACCAGGTAGCATACAAGGAATCACCACTGGAGAGAGACGATATTCCCTTCAACAGAAGCCTTCGCAGAACTTCTCGGCTTGAGGAATCTTCCCCAAATGAAGATTTCAGCAACTTTGACGTGTTATCCGCAAGGGGTTAGTGTGAATATATTAAACTTGTCAAGCTTTGATGCATCTCTTATCTGTTTCGTTAAATGTGAGCTGGCTATTCTGTGGAAAGAGTCAAAGGTGATAATGTCTGTAGTATGAAAATTATTTGATTTAGTAGTTAGAAAATTTCTTCATCATTCTTGAGGTTATCATGTCTATTGGATTGAGAGTTTTTAAATCTTGTGTCCATTGAGTTGTTCAAAAAACAAAAACCATCATGATTGGAATACCCAAAACTTCTAGCTTGCCAAGATTTCTCAAGTGATCAAGCAAGGATATGCCCGTTGGGCCTGATTTCAATCCTCTCCCCATTTGGGCTTGAACTTGAGAGACCCAATTCCTAAATCTAGAACCATTAGATTCGGGTCCATTAAGGACTGTAAGAACAAATGATAAAGAATCTAGAAGAATTGCCCCAAAGAGATGAAGAAGTGATCAAGAAACCAAATCTTCTTCGACCATGTGTCTGAACAAATAATTTGTTATTTGTTGAAGGAAGATCAAAGGGGGGAGAAAATGACAAATTAGAAAGTCATAATGAAAAGATATGCCGGTGAAGTGTTTGACATTGATTTGGTTTTGTGAGGCTCGTAT TTCAGATACCTTCCCCAATTTCTGCTCCATCCTTCTTCTTCTTCTTCCTCCCTCTCTTTTCTCTCTGTTTCCCTCCATGAAATGGGACATGGAGATCGAGGAAATCGAGGCTGTCCTCGAGAAGATTTGGGACCTTCACGACAAGCTCAGTGAAGCAATTCACTCAATTTCCCGAGATCACTTCCTCACTTCCACCAAACATCTCAGGAAATCGGACAACAAGGATTCCAACAAGACCCCCAATGCCCTACCCGACACTGCTGTCTTCCCTTTCATTAATGAATTTCGGATCGACCTTGATGATTCTGCCATCCAGGAGGCCAGAAGTCTAAATTCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATACGGTTCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCTTTAGCATTTGTTGGAGATGTACGTTATGCACCTAACTATGTTTCACACGAAAAGCAATATGGTCCCCAATTTAGCCCGAACAGTCAGAAGCCTATGCCGAACAGTTCAACGAGGTCTAATACTCTGATCAAGATGCTATTCTCAACTCTCAACTTTGCTAGGAAATCCCTCAAAATGGATCATGTGGGTGGGATACTTGGCAATGCTGCCTTGGTTGCAATTAGCATGCTAGCTTTCCTGCATCTGCACCAGGTAGCATACAAGGAATCACCACTGGAGAGAGACGATATTCCCTTCAACAGAAGCCTTCGCAGAACTTCTCGGCTTGAGGAATCTTCCCCAAATGAAGATTTCAGCAACTTTGACGTGTTATCCGCAAGGGGTTAGTGTGAATATATTAAACTTGTCAAGCTTTGATGCATCTCTTATCTGTTTCGTTAAATGTGAGCTGGCTATTCTGTGGAAAGAGTCAAAGGTGATAATGTCTGTAGTATGAAAATTATTTGATTTAGTAGTTAGAAAATTTCTTCATCATTCTTGAGGTTATCATGTCTATTGGATTGAGAGTTTTTAAATCTTGTGTCCATTGAGTTGTTCAAAAAACAAAAACCATCATGATTGGAATACCCAAAACTTCTAGCTTGCCAAGATTTCTCAAGTGATCAAGCAAGGATATGCCCGTTGGGCCTGATTTCAATCCTCTCCCCATTTGGGCTTGAACTTGAGAGACCCAATTCCTAAATCTAGAACCATTAGATTCGGGTCCATTAAGGACTGTAAGAACAAATGATAAAGAATCTAGAAGAATTGCCCCAAAGAGATGAAGAAGTGATCAAGAAACCAAATCTTCTTCGACCATGTGTCTGAACAAATAATTTGTTATTTGTTGAAGGAAGATCAAAGGGGGGAGAAAATGACAAATTAGAAAGTCATAATGAAAAGATATGCCGGTGAAGTGTTTGACATTGATTTGGTTTTGTGAGGCTCGTAT ATGAAATGGGACATGGAGATCGAGGAAATCGAGGCTGTCCTCGAGAAGATTTGGGACCTTCACGACAAGCTCAGTGAAGCAATTCACTCAATTTCCCGAGATCACTTCCTCACTTCCACCAAACATCTCAGGAAATCGGACAACAAGGATTCCAACAAGACCCCCAATGCCCTACCCGACACTGCTGTCTTCCCTTTCATTAATGAATTTCGGATCGACCTTGATGATTCTGCCATCCAGGAGGCCAGAAGTCTAAATTCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATACGGTTCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCTTTAGCATTTGTTGGAGATGTACGTTATGCACCTAACTATGTTTCACACGAAAAGCAATATGGTCCCCAATTTAGCCCGAACAGTCAGAAGCCTATGCCGAACAGTTCAACGAGGTCTAATACTCTGATCAAGATGCTATTCTCAACTCTCAACTTTGCTAGGAAATCCCTCAAAATGGATCATGTGGGTGGGATACTTGGCAATGCTGCCTTGGTTGCAATTAGCATGCTAGCTTTCCTGCATCTGCACCAGGTAGCATACAAGGAATCACCACTGGAGAGAGACGATATTCCCTTCAACAGAAGCCTTCGCAGAACTTCTCGGCTTGAGGAATCTTCCCCAAATGAAGATTTCAGCAACTTTGACGTGTTATCCGCAAGGGGTTAG MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSDNKDSNKTPNALPDTAVFPFINEFRIDLDDSAIQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAPNYVSHEKQYGPQFSPNSQKPMPNSSTRSNTLIKMLFSTLNFARKSLKMDHVGGILGNAALVAISMLAFLHLHQVAYKESPLERDDIPFNRSLRRTSRLEESSPNEDFSNFDVLSARG
BLAST of Lsi05G000700 vs. Swiss-Prot
Match: PDV1_ARATH (Plastid division protein PDV1 OS=Arabidopsis thaliana GN=PDV1 PE=1 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 2.5e-67 Identity = 143/271 (52.77%), Postives = 187/271 (69.00%), Query Frame = 1
BLAST of Lsi05G000700 vs. TrEMBL
Match: A0A0A0LCS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357100 PE=4 SV=1) HSP 1 Score: 473.4 bits (1217), Expect = 1.9e-130 Identity = 246/278 (88.49%), Postives = 260/278 (93.53%), Query Frame = 1
BLAST of Lsi05G000700 vs. TrEMBL
Match: A0A061G8R9_THECC (Plastid division protein PDV1 OS=Theobroma cacao GN=TCM_015337 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 4.5e-84 Identity = 176/274 (64.23%), Postives = 205/274 (74.82%), Query Frame = 1
BLAST of Lsi05G000700 vs. TrEMBL
Match: E0CUK8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02390 PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 9.4e-82 Identity = 176/276 (63.77%), Postives = 210/276 (76.09%), Query Frame = 1
BLAST of Lsi05G000700 vs. TrEMBL
Match: A0A067JRN3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26010 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 3.9e-80 Identity = 167/271 (61.62%), Postives = 211/271 (77.86%), Query Frame = 1
BLAST of Lsi05G000700 vs. TrEMBL
Match: A0A0B0NFJ3_GOSAR (Plastid division PDV1-like protein OS=Gossypium arboreum GN=F383_13427 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 3.3e-79 Identity = 165/275 (60.00%), Postives = 203/275 (73.82%), Query Frame = 1
BLAST of Lsi05G000700 vs. TAIR10
Match: AT5G53280.1 (AT5G53280.1 plastid division1) HSP 1 Score: 256.9 bits (655), Expect = 1.4e-68 Identity = 143/271 (52.77%), Postives = 187/271 (69.00%), Query Frame = 1
BLAST of Lsi05G000700 vs. TAIR10
Match: AT2G16070.2 (AT2G16070.2 plastid division2) HSP 1 Score: 50.1 bits (118), Expect = 2.6e-06 Identity = 46/152 (30.26%), Postives = 73/152 (48.03%), Query Frame = 1
BLAST of Lsi05G000700 vs. NCBI nr
Match: gi|449463466|ref|XP_004149455.1| (PREDICTED: plastid division protein PDV1 [Cucumis sativus]) HSP 1 Score: 473.4 bits (1217), Expect = 2.7e-130 Identity = 246/278 (88.49%), Postives = 260/278 (93.53%), Query Frame = 1
BLAST of Lsi05G000700 vs. NCBI nr
Match: gi|659077677|ref|XP_008439328.1| (PREDICTED: plastid division protein PDV1 [Cucumis melo]) HSP 1 Score: 473.0 bits (1216), Expect = 3.5e-130 Identity = 246/279 (88.17%), Postives = 260/279 (93.19%), Query Frame = 1
BLAST of Lsi05G000700 vs. NCBI nr
Match: gi|225462701|ref|XP_002266963.1| (PREDICTED: plastid division protein PDV1 [Vitis vinifera]) HSP 1 Score: 320.5 bits (820), Expect = 2.9e-84 Identity = 179/280 (63.93%), Postives = 214/280 (76.43%), Query Frame = 1
BLAST of Lsi05G000700 vs. NCBI nr
Match: gi|590673617|ref|XP_007038943.1| (Plastid division protein PDV1 [Theobroma cacao]) HSP 1 Score: 319.3 bits (817), Expect = 6.5e-84 Identity = 176/274 (64.23%), Postives = 205/274 (74.82%), Query Frame = 1
BLAST of Lsi05G000700 vs. NCBI nr
Match: gi|802767779|ref|XP_012090124.1| (PREDICTED: plastid division protein PDV1 [Jatropha curcas]) HSP 1 Score: 314.7 bits (805), Expect = 1.6e-82 Identity = 170/275 (61.82%), Postives = 215/275 (78.18%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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