Carg20359 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCCCCTTTCCCGCCATGAAATGGGACATGGAAATCGAGGAAATCGAGGTTATCCTCGAGAAGATTTGGGACCTTCACGATAAGCTCAGTGAAGCTATTCACTCCATTACCCGAGACCACTTCCTCACCTCCACCCAAAATCTCAGGAAACCCGACACCAAGGATTCTAAGTCCCCCAGTGCCCGACCCACTCACAACCCTGCTGGCCCCTCCCCTTTCGTCAGGGACTTTCGGATCCACGTCGATGATTCGGCTATCCAGGAGGCCAGAAGTCTAAACGCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTTGAATTTTTCCATGTATGTTGATTTTTTGCCCAATTCCGTGCGCTTCTTTTAATTATTTAACGCCTATTCTATTTCTTATCGATGACGAATTTGACGGAAGAGACAACAGGAAACCCTTGTTTCGATCCTTTTGGGGGTTCCATTATTACCCGAACCACCAGATTACGTACTGTTAGCTTGGTTTGCGGTTTAATTCAGTGTTCTTACCTCCCAATCGGAATTACATCTGTAGTTTATGATTTTATGTGTTTTCTGCTCTCTGGAAAATTGAAAACAGGAATCTTAAATTCATTTTCCTTAATTTGTGTTCAACGCCATTGTTCAGTTAGCTTACAGATGGAAATGTGTTAATTTCTTGTCGCGTCTGTTTGTCTTGGTCTCTGGTTATTGTAAGCTTTCTGTTGTTCCATCATTTAGAGGGTTAAGCGGGAAAGAAAGCTTGCTGTTGAGATAATTTGAATGCAATAGTTATGTTACTTGCTCTTGTTTCAACTTCTAAATCATGATTCAGGGAGCTTTACAGGATGTTCCTTTTCATTTTTTCATTAGGATTATACGCTAAGCCAAACTAAGTCTAGCAATTGTGTGTCAATCAGAATGTCAATACAGCTACAAATTTTCTATTTTAATGTTCTTGAAGCCATAAGTTTTCTTGAATTTCTTACGGCTGTTTAGGATGGTTTCCAGAAAAACAAAGTTGTTTCTTCTATGAATGAACTGCGTTTTAGATCAATGGAAGTTTGTCATCCCTGTAGAAATCATGGGCAGATACCAAACTTTTACCAGTCATTCAGTGATTAGTTAAAAACAAGCTCAGCAAATTGTTTCGAAGACCGTCTTCTGAACAAGGTTGAGTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTTCTTATGAGGGTGTAGAAACCCCTCCCTAGTAGACGTGTTTGAAAACCATGAGGTTGACGGCCATACGTAACAGGCCAAAGCGGACAATATCTGCTAGTGGTGGACTTGAGTTGTTACAAATGGTATTAGAGTCAGACACCGAGCGGTGTGCCAACAGGGATGTTGGGCCCCAAGAGGGGTGGATTGTGAGATCCCACATCGGTTGGAAAGGGGAACAAAGCATTCCTCATAAGGGTGTGGAAACCTTTTCCTAGTAGACGCGTTTTAAAACCGTAAGACTGATGGTGATACGTAAAGGTCTAAAGCGGACAATATCTGCTAGCGGTGGATTTGGGCTATTACATTGAACTTCTTCTTCATATTCATAGGACGAACAAACCATAGATACTTAGCGTAGAGAAGACCTTTAATGGAACTGCAACTGCAAATTGTACACTTGATGCTTCAGTTTGAAATGAAAGCTGTAAACAGCGTTCTTTTATTTCTTCTTACCTGTGGGGTTACGATGATAAGTATTTCATTAGGGGGAACATATTTTTTGAGTCTTGACAATCTCTTTGGCAAATTCATTGTTTCGATTTTGCAGACCGTGCAAGTGCAACAACAGGTTGATAAAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGCGAAGCCTTAGCGTTTGTTGGAGATGTACGTTATCCTGCTAACTATGCTTCGCATGGGAAACAAGATGCTCCACCATTTACCCCAAATTGTGAGAAGCTTGCATTGAACAGTTCAAAGAGGTCTAATATTGTTGTCAAGATGCTATTCTCAACTCTCGACATAGCAAGAAAATCCCTCAAACTTGATAATGTGGGCGGGATACTTGGCAATGCTGCCCTGGTTGCAATCAGCATGCTTGCATTTCTGCATATGCACCATATAGCATATAAGGAGCCATCACCTGAGAAAGACGATATTCCCTTCAACAGAAATCTTCGGAGAACATCTCGGCTCGAAGGATCTTCCCCAAATGAAGATTTCCGCAACTTCGATGTGTTATCAGCTAGGGGTTAGTGTGAACATATTAAACTTTTCAAGCTTTGATGCATCTCTTATCTGCTTCACTAAATGTCAGCTGCTTATCCTGTGGAATGAGTCAAATATGATCATGTCTGTTGTATGAAAATTATTTGATTTAGTTGTTAGAAGTTTCATCACCATTCTTGAGGTTGTCATGTGTAGTGGATAGAGAGTTTTAAACCTTCTCCAACAAACATTCATGAATGCAATACCAAGATTTGTGAAGTGATCGAGTAAAGGACATGTCCATTGGGCCTGAATACAATTCTCTCCCCATTAGGTCCTGACCTTGAGAGACCCAAACCCATAATGTAGAACAACCAAATCTTCTTTGACCACATGTGGAACCATGATATTGTTATGTCGGCCGGCTAAGTGTTTGATGTTGATTTGTAGCCATGTCCGGTGAGGCTTTCTTTTACTTGTTTAATTTGAAAGCCTGC TCCCCCTTTCCCGCCATGAAATGGGACATGGAAATCGAGGAAATCGAGGTTATCCTCGAGAAGATTTGGGACCTTCACGATAAGCTCAGTGAAGCTATTCACTCCATTACCCGAGACCACTTCCTCACCTCCACCCAAAATCTCAGGAAACCCGACACCAAGGATTCTAAGTCCCCCAGTGCCCGACCCACTCACAACCCTGCTGGCCCCTCCCCTTTCGTCAGGGACTTTCGGATCCACGTCGATGATTCGGCTATCCAGGAGGCCAGAAGTCTAAACGCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTTGAATTTTTCCATACCGTGCAAGTGCAACAACAGGTTGATAAAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGCGAAGCCTTAGCGTTTGTTGGAGATGTACGTTATCCTGCTAACTATGCTTCGCATGGGAAACAAGATGCTCCACCATTTACCCCAAATTGTGAGAAGCTTGCATTGAACAGTTCAAAGAGGTCTAATATTGTTGTCAAGATGCTATTCTCAACTCTCGACATAGCAAGAAAATCCCTCAAACTTGATAATGTGGGCGGGATACTTGGCAATGCTGCCCTGGTTGCAATCAGCATGCTTGCATTTCTGCATATGCACCATATAGCATATAAGGAGCCATCACCTGAGAAAGACGATATTCCCTTCAACAGAAATCTTCGGAGAACATCTCGGCTCGAAGGATCTTCCCCAAATGAAGATTTCCGCAACTTCGATGTGTTATCAGCTAGGGGTTAGTGTGAACATATTAAACTTTTCAAGCTTTGATGCATCTCTTATCTGCTTCACTAAATGTCAGCTGCTTATCCTGTGGAATGAGTCAAATATGATCATGTCTGTTGTATGAAAATTATTTGATTTAGTTGTTAGAAGTTTCATCACCATTCTTGAGGTTGTCATGTGTAGTGGATAGAGAGTTTTAAACCTTCTCCAACAAACATTCATGAATGCAATACCAAGATTTGTGAAGTGATCGAGTAAAGGACATGTCCATTGGGCCTGAATACAATTCTCTCCCCATTAGGTCCTGACCTTGAGAGACCCAAACCCATAATGTAGAACAACCAAATCTTCTTTGACCACATGTGGAACCATGATATTGTTATGTCGGCCGGCTAAGTGTTTGATGTTGATTTGTAGCCATGTCCGGTGAGGCTTTCTTTTACTTGTTTAATTTGAAAGCCTGC ATGAAATGGGACATGGAAATCGAGGAAATCGAGGTTATCCTCGAGAAGATTTGGGACCTTCACGATAAGCTCAGTGAAGCTATTCACTCCATTACCCGAGACCACTTCCTCACCTCCACCCAAAATCTCAGGAAACCCGACACCAAGGATTCTAAGTCCCCCAGTGCCCGACCCACTCACAACCCTGCTGGCCCCTCCCCTTTCGTCAGGGACTTTCGGATCCACGTCGATGATTCGGCTATCCAGGAGGCCAGAAGTCTAAACGCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTTGAATTTTTCCATACCGTGCAAGTGCAACAACAGGTTGATAAAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGCGAAGCCTTAGCGTTTGTTGGAGATGTACGTTATCCTGCTAACTATGCTTCGCATGGGAAACAAGATGCTCCACCATTTACCCCAAATTGTGAGAAGCTTGCATTGAACAGTTCAAAGAGGTCTAATATTGTTGTCAAGATGCTATTCTCAACTCTCGACATAGCAAGAAAATCCCTCAAACTTGATAATGTGGGCGGGATACTTGGCAATGCTGCCCTGGTTGCAATCAGCATGCTTGCATTTCTGCATATGCACCATATAGCATATAAGGAGCCATCACCTGAGAAAGACGATATTCCCTTCAACAGAAATCTTCGGAGAACATCTCGGCTCGAAGGATCTTCCCCAAATGAAGATTTCCGCAACTTCGATGTGTTATCAGCTAGGGGTTAG MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKPDTKDSKSPSARPTHNPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDKDAAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLALNSSKRSNIVVKMLFSTLDIARKSLKLDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPEKDDIPFNRNLRRTSRLEGSSPNEDFRNFDVLSARG
BLAST of Carg20359 vs. NCBI nr
Match: XP_023541198.1 (plastid division protein PDV1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 533.5 bits (1373), Expect = 4.3e-148 Identity = 270/275 (98.18%), Postives = 273/275 (99.27%), Query Frame = 0
BLAST of Carg20359 vs. NCBI nr
Match: XP_022945966.1 (plastid division protein PDV1-like [Cucurbita moschata]) HSP 1 Score: 533.1 bits (1372), Expect = 5.6e-148 Identity = 272/275 (98.91%), Postives = 273/275 (99.27%), Query Frame = 0
BLAST of Carg20359 vs. NCBI nr
Match: XP_022968214.1 (plastid division protein PDV1-like [Cucurbita maxima]) HSP 1 Score: 531.9 bits (1369), Expect = 1.2e-147 Identity = 270/275 (98.18%), Postives = 273/275 (99.27%), Query Frame = 0
BLAST of Carg20359 vs. NCBI nr
Match: XP_022140820.1 (plastid division protein PDV1 isoform X2 [Momordica charantia]) HSP 1 Score: 424.1 bits (1089), Expect = 3.7e-115 Identity = 213/275 (77.45%), Postives = 242/275 (88.00%), Query Frame = 0
BLAST of Carg20359 vs. NCBI nr
Match: XP_022140819.1 (plastid division protein PDV1 isoform X1 [Momordica charantia]) HSP 1 Score: 419.5 bits (1077), Expect = 9.0e-114 Identity = 213/276 (77.17%), Postives = 242/276 (87.68%), Query Frame = 0
BLAST of Carg20359 vs. TAIR10
Match: AT5G53280.1 (plastid division1) HSP 1 Score: 229.2 bits (583), Expect = 3.1e-60 Identity = 130/273 (47.62%), Postives = 178/273 (65.20%), Query Frame = 0
BLAST of Carg20359 vs. TAIR10
Match: AT2G16070.2 (plastid division2) HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06 Identity = 48/151 (31.79%), Postives = 74/151 (49.01%), Query Frame = 0
BLAST of Carg20359 vs. Swiss-Prot
Match: sp|Q9FK13|PDV1_ARATH (Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 5.6e-59 Identity = 130/273 (47.62%), Postives = 178/273 (65.20%), Query Frame = 0
BLAST of Carg20359 vs. Swiss-Prot
Match: sp|Q9XII1|PDV2_ARATH (Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.7e-05 Identity = 48/151 (31.79%), Postives = 74/151 (49.01%), Query Frame = 0
BLAST of Carg20359 vs. TrEMBL
Match: tr|A0A0A0LCS6|A0A0A0LCS6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G357100 PE=4 SV=1) HSP 1 Score: 394.0 bits (1011), Expect = 2.7e-106 Identity = 206/278 (74.10%), Postives = 231/278 (83.09%), Query Frame = 0
BLAST of Carg20359 vs. TrEMBL
Match: tr|A0A1S3AYK3|A0A1S3AYK3_CUCME (plastid division protein PDV1 OS=Cucumis melo OX=3656 GN=LOC103484150 PE=4 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 1.3e-105 Identity = 206/279 (73.84%), Postives = 231/279 (82.80%), Query Frame = 0
BLAST of Carg20359 vs. TrEMBL
Match: tr|A0A2N9EMK2|A0A2N9EMK2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3944 PE=4 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 1.6e-82 Identity = 170/277 (61.37%), Postives = 207/277 (74.73%), Query Frame = 0
BLAST of Carg20359 vs. TrEMBL
Match: tr|A0A2P4MDN2|A0A2P4MDN2_QUESU (Plastid division protein pdv1 OS=Quercus suber OX=58331 GN=CFP56_35315 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 3.0e-81 Identity = 172/288 (59.72%), Postives = 210/288 (72.92%), Query Frame = 0
BLAST of Carg20359 vs. TrEMBL
Match: tr|A0A2I4GTZ0|A0A2I4GTZ0_9ROSI (plastid division protein PDV1 OS=Juglans regia OX=51240 GN=LOC109010866 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 1.9e-80 Identity = 166/284 (58.45%), Postives = 206/284 (72.54%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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