Carg20359 (gene) Silver-seed gourd

NameCarg20359
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionplastid division protein PDV1
LocationCucurbita_argyrosperma_scaffold_178 : 264942 .. 267703 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCCCCTTTCCCGCCATGAAATGGGACATGGAAATCGAGGAAATCGAGGTTATCCTCGAGAAGATTTGGGACCTTCACGATAAGCTCAGTGAAGCTATTCACTCCATTACCCGAGACCACTTCCTCACCTCCACCCAAAATCTCAGGAAACCCGACACCAAGGATTCTAAGTCCCCCAGTGCCCGACCCACTCACAACCCTGCTGGCCCCTCCCCTTTCGTCAGGGACTTTCGGATCCACGTCGATGATTCGGCTATCCAGGAGGCCAGAAGTCTAAACGCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTTGAATTTTTCCATGTATGTTGATTTTTTGCCCAATTCCGTGCGCTTCTTTTAATTATTTAACGCCTATTCTATTTCTTATCGATGACGAATTTGACGGAAGAGACAACAGGAAACCCTTGTTTCGATCCTTTTGGGGGTTCCATTATTACCCGAACCACCAGATTACGTACTGTTAGCTTGGTTTGCGGTTTAATTCAGTGTTCTTACCTCCCAATCGGAATTACATCTGTAGTTTATGATTTTATGTGTTTTCTGCTCTCTGGAAAATTGAAAACAGGAATCTTAAATTCATTTTCCTTAATTTGTGTTCAACGCCATTGTTCAGTTAGCTTACAGATGGAAATGTGTTAATTTCTTGTCGCGTCTGTTTGTCTTGGTCTCTGGTTATTGTAAGCTTTCTGTTGTTCCATCATTTAGAGGGTTAAGCGGGAAAGAAAGCTTGCTGTTGAGATAATTTGAATGCAATAGTTATGTTACTTGCTCTTGTTTCAACTTCTAAATCATGATTCAGGGAGCTTTACAGGATGTTCCTTTTCATTTTTTCATTAGGATTATACGCTAAGCCAAACTAAGTCTAGCAATTGTGTGTCAATCAGAATGTCAATACAGCTACAAATTTTCTATTTTAATGTTCTTGAAGCCATAAGTTTTCTTGAATTTCTTACGGCTGTTTAGGATGGTTTCCAGAAAAACAAAGTTGTTTCTTCTATGAATGAACTGCGTTTTAGATCAATGGAAGTTTGTCATCCCTGTAGAAATCATGGGCAGATACCAAACTTTTACCAGTCATTCAGTGATTAGTTAAAAACAAGCTCAGCAAATTGTTTCGAAGACCGTCTTCTGAACAAGGTTGAGTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAGCATTTCTTATGAGGGTGTAGAAACCCCTCCCTAGTAGACGTGTTTGAAAACCATGAGGTTGACGGCCATACGTAACAGGCCAAAGCGGACAATATCTGCTAGTGGTGGACTTGAGTTGTTACAAATGGTATTAGAGTCAGACACCGAGCGGTGTGCCAACAGGGATGTTGGGCCCCAAGAGGGGTGGATTGTGAGATCCCACATCGGTTGGAAAGGGGAACAAAGCATTCCTCATAAGGGTGTGGAAACCTTTTCCTAGTAGACGCGTTTTAAAACCGTAAGACTGATGGTGATACGTAAAGGTCTAAAGCGGACAATATCTGCTAGCGGTGGATTTGGGCTATTACATTGAACTTCTTCTTCATATTCATAGGACGAACAAACCATAGATACTTAGCGTAGAGAAGACCTTTAATGGAACTGCAACTGCAAATTGTACACTTGATGCTTCAGTTTGAAATGAAAGCTGTAAACAGCGTTCTTTTATTTCTTCTTACCTGTGGGGTTACGATGATAAGTATTTCATTAGGGGGAACATATTTTTTGAGTCTTGACAATCTCTTTGGCAAATTCATTGTTTCGATTTTGCAGACCGTGCAAGTGCAACAACAGGTTGATAAAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGCGAAGCCTTAGCGTTTGTTGGAGATGTACGTTATCCTGCTAACTATGCTTCGCATGGGAAACAAGATGCTCCACCATTTACCCCAAATTGTGAGAAGCTTGCATTGAACAGTTCAAAGAGGTCTAATATTGTTGTCAAGATGCTATTCTCAACTCTCGACATAGCAAGAAAATCCCTCAAACTTGATAATGTGGGCGGGATACTTGGCAATGCTGCCCTGGTTGCAATCAGCATGCTTGCATTTCTGCATATGCACCATATAGCATATAAGGAGCCATCACCTGAGAAAGACGATATTCCCTTCAACAGAAATCTTCGGAGAACATCTCGGCTCGAAGGATCTTCCCCAAATGAAGATTTCCGCAACTTCGATGTGTTATCAGCTAGGGGTTAGTGTGAACATATTAAACTTTTCAAGCTTTGATGCATCTCTTATCTGCTTCACTAAATGTCAGCTGCTTATCCTGTGGAATGAGTCAAATATGATCATGTCTGTTGTATGAAAATTATTTGATTTAGTTGTTAGAAGTTTCATCACCATTCTTGAGGTTGTCATGTGTAGTGGATAGAGAGTTTTAAACCTTCTCCAACAAACATTCATGAATGCAATACCAAGATTTGTGAAGTGATCGAGTAAAGGACATGTCCATTGGGCCTGAATACAATTCTCTCCCCATTAGGTCCTGACCTTGAGAGACCCAAACCCATAATGTAGAACAACCAAATCTTCTTTGACCACATGTGGAACCATGATATTGTTATGTCGGCCGGCTAAGTGTTTGATGTTGATTTGTAGCCATGTCCGGTGAGGCTTTCTTTTACTTGTTTAATTTGAAAGCCTGC

mRNA sequence

TCCCCCTTTCCCGCCATGAAATGGGACATGGAAATCGAGGAAATCGAGGTTATCCTCGAGAAGATTTGGGACCTTCACGATAAGCTCAGTGAAGCTATTCACTCCATTACCCGAGACCACTTCCTCACCTCCACCCAAAATCTCAGGAAACCCGACACCAAGGATTCTAAGTCCCCCAGTGCCCGACCCACTCACAACCCTGCTGGCCCCTCCCCTTTCGTCAGGGACTTTCGGATCCACGTCGATGATTCGGCTATCCAGGAGGCCAGAAGTCTAAACGCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTTGAATTTTTCCATACCGTGCAAGTGCAACAACAGGTTGATAAAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGCGAAGCCTTAGCGTTTGTTGGAGATGTACGTTATCCTGCTAACTATGCTTCGCATGGGAAACAAGATGCTCCACCATTTACCCCAAATTGTGAGAAGCTTGCATTGAACAGTTCAAAGAGGTCTAATATTGTTGTCAAGATGCTATTCTCAACTCTCGACATAGCAAGAAAATCCCTCAAACTTGATAATGTGGGCGGGATACTTGGCAATGCTGCCCTGGTTGCAATCAGCATGCTTGCATTTCTGCATATGCACCATATAGCATATAAGGAGCCATCACCTGAGAAAGACGATATTCCCTTCAACAGAAATCTTCGGAGAACATCTCGGCTCGAAGGATCTTCCCCAAATGAAGATTTCCGCAACTTCGATGTGTTATCAGCTAGGGGTTAGTGTGAACATATTAAACTTTTCAAGCTTTGATGCATCTCTTATCTGCTTCACTAAATGTCAGCTGCTTATCCTGTGGAATGAGTCAAATATGATCATGTCTGTTGTATGAAAATTATTTGATTTAGTTGTTAGAAGTTTCATCACCATTCTTGAGGTTGTCATGTGTAGTGGATAGAGAGTTTTAAACCTTCTCCAACAAACATTCATGAATGCAATACCAAGATTTGTGAAGTGATCGAGTAAAGGACATGTCCATTGGGCCTGAATACAATTCTCTCCCCATTAGGTCCTGACCTTGAGAGACCCAAACCCATAATGTAGAACAACCAAATCTTCTTTGACCACATGTGGAACCATGATATTGTTATGTCGGCCGGCTAAGTGTTTGATGTTGATTTGTAGCCATGTCCGGTGAGGCTTTCTTTTACTTGTTTAATTTGAAAGCCTGC

Coding sequence (CDS)

ATGAAATGGGACATGGAAATCGAGGAAATCGAGGTTATCCTCGAGAAGATTTGGGACCTTCACGATAAGCTCAGTGAAGCTATTCACTCCATTACCCGAGACCACTTCCTCACCTCCACCCAAAATCTCAGGAAACCCGACACCAAGGATTCTAAGTCCCCCAGTGCCCGACCCACTCACAACCCTGCTGGCCCCTCCCCTTTCGTCAGGGACTTTCGGATCCACGTCGATGATTCGGCTATCCAGGAGGCCAGAAGTCTAAACGCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTTGAATTTTTCCATACCGTGCAAGTGCAACAACAGGTTGATAAAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGCGAAGCCTTAGCGTTTGTTGGAGATGTACGTTATCCTGCTAACTATGCTTCGCATGGGAAACAAGATGCTCCACCATTTACCCCAAATTGTGAGAAGCTTGCATTGAACAGTTCAAAGAGGTCTAATATTGTTGTCAAGATGCTATTCTCAACTCTCGACATAGCAAGAAAATCCCTCAAACTTGATAATGTGGGCGGGATACTTGGCAATGCTGCCCTGGTTGCAATCAGCATGCTTGCATTTCTGCATATGCACCATATAGCATATAAGGAGCCATCACCTGAGAAAGACGATATTCCCTTCAACAGAAATCTTCGGAGAACATCTCGGCTCGAAGGATCTTCCCCAAATGAAGATTTCCGCAACTTCGATGTGTTATCAGCTAGGGGTTAG

Protein sequence

MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKPDTKDSKSPSARPTHNPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDKDAAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLALNSSKRSNIVVKMLFSTLDIARKSLKLDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPEKDDIPFNRNLRRTSRLEGSSPNEDFRNFDVLSARG
BLAST of Carg20359 vs. NCBI nr
Match: XP_023541198.1 (plastid division protein PDV1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.5 bits (1373), Expect = 4.3e-148
Identity = 270/275 (98.18%), Postives = 273/275 (99.27%), Query Frame = 0

Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKPDTKDSKSPSARPTH 60
           MKWDME+EEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRK DTKDSKSPS RPTH
Sbjct: 1   MKWDMELEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSGRPTH 60

Query: 61  NPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDKDAAIA 120
           NPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVD+DAAIA
Sbjct: 61  NPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDAAIA 120

Query: 121 RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLAL 180
           RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLAL
Sbjct: 121 RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLAL 180

Query: 181 NSSKRSNIVVKMLFSTLDIARKSLKLDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPE 240
           NSSKRSNIVVKMLFSTLDIARKSLK+DNVGGILGNAALVAISMLAFLHMHHIAYKEPSPE
Sbjct: 181 NSSKRSNIVVKMLFSTLDIARKSLKMDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPE 240

Query: 241 KDDIPFNRNLRRTSRLEGSSPNEDFRNFDVLSARG 276
           KDDIPFNRNLRRTSRLEGSSPNEDFRNFDVLSARG
Sbjct: 241 KDDIPFNRNLRRTSRLEGSSPNEDFRNFDVLSARG 275

BLAST of Carg20359 vs. NCBI nr
Match: XP_022945966.1 (plastid division protein PDV1-like [Cucurbita moschata])

HSP 1 Score: 533.1 bits (1372), Expect = 5.6e-148
Identity = 272/275 (98.91%), Postives = 273/275 (99.27%), Query Frame = 0

Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKPDTKDSKSPSARPTH 60
           MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRK DTKDSKSPSARPTH
Sbjct: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSARPTH 60

Query: 61  NPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDKDAAIA 120
           NPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVD+DAAIA
Sbjct: 61  NPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDAAIA 120

Query: 121 RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLAL 180
           RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLAL
Sbjct: 121 RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLAL 180

Query: 181 NSSKRSNIVVKMLFSTLDIARKSLKLDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPE 240
           NSSKRSNIVVKMLFSTLDIARKSLKLDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPE
Sbjct: 181 NSSKRSNIVVKMLFSTLDIARKSLKLDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPE 240

Query: 241 KDDIPFNRNLRRTSRLEGSSPNEDFRNFDVLSARG 276
           KDDIPFNRNLRRTSRLEGSSPNE FRNFDVLSARG
Sbjct: 241 KDDIPFNRNLRRTSRLEGSSPNEVFRNFDVLSARG 275

BLAST of Carg20359 vs. NCBI nr
Match: XP_022968214.1 (plastid division protein PDV1-like [Cucurbita maxima])

HSP 1 Score: 531.9 bits (1369), Expect = 1.2e-147
Identity = 270/275 (98.18%), Postives = 273/275 (99.27%), Query Frame = 0

Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKPDTKDSKSPSARPTH 60
           MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRK DTKDSKSPS RPTH
Sbjct: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSDRPTH 60

Query: 61  NPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDKDAAIA 120
           NPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVD+DAAIA
Sbjct: 61  NPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDAAIA 120

Query: 121 RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLAL 180
           RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLAL
Sbjct: 121 RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLAL 180

Query: 181 NSSKRSNIVVKMLFSTLDIARKSLKLDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPE 240
           NSSKRSNIVVKMLFSTLDIARKSLK+DNVGGILGNAALVAISMLAFLHMHHIAYKEPSPE
Sbjct: 181 NSSKRSNIVVKMLFSTLDIARKSLKMDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPE 240

Query: 241 KDDIPFNRNLRRTSRLEGSSPNEDFRNFDVLSARG 276
           KDDIPFNRNL+RTSRLEGSSPNEDFRNFDVLSARG
Sbjct: 241 KDDIPFNRNLQRTSRLEGSSPNEDFRNFDVLSARG 275

BLAST of Carg20359 vs. NCBI nr
Match: XP_022140820.1 (plastid division protein PDV1 isoform X2 [Momordica charantia])

HSP 1 Score: 424.1 bits (1089), Expect = 3.7e-115
Identity = 213/275 (77.45%), Postives = 242/275 (88.00%), Query Frame = 0

Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKPDTKDSKSPSARPTH 60
           MKWDMEIEEIE +LEKIWD+HDKLSEAIHSI+RDHFLTST+NLRK   KDSK+P+     
Sbjct: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60

Query: 61  NPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDKDAAIA 120
           NP+   PF+++FRI +DDSAIQEARSLNAIRTALENLEDQLEF HTVQVQQQV++DAAIA
Sbjct: 61  NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDAAIA 120

Query: 121 RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLAL 180
           RLEQSRIVLAMRLAEHHGKNYKVI+EALAFVGDVRY AN+ SH  Q  PPF+PN +KL  
Sbjct: 121 RLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLMP 180

Query: 181 NSSKRSNIVVKMLFSTLDIARKSLKLDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPE 240
           NSSKRSN ++KMLFST + A+KSLK+DNVGGIL NAA+VAISMLAFLH+H +A+K+ S E
Sbjct: 181 NSSKRSNTLIKMLFSTFNFAKKSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQE 240

Query: 241 KDDIPFNRNLRRTSRLEGSSPNEDFRNFDVLSARG 276
           +DD PFNRNLRRTS+LEGSSPNED  NFDVLSARG
Sbjct: 241 RDDNPFNRNLRRTSQLEGSSPNEDIGNFDVLSARG 275

BLAST of Carg20359 vs. NCBI nr
Match: XP_022140819.1 (plastid division protein PDV1 isoform X1 [Momordica charantia])

HSP 1 Score: 419.5 bits (1077), Expect = 9.0e-114
Identity = 213/276 (77.17%), Postives = 242/276 (87.68%), Query Frame = 0

Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKPDTKDSKSPSARPTH 60
           MKWDMEIEEIE +LEKIWD+HDKLSEAIHSI+RDHFLTST+NLRK   KDSK+P+     
Sbjct: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60

Query: 61  NPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFH-TVQVQQQVDKDAAI 120
           NP+   PF+++FRI +DDSAIQEARSLNAIRTALENLEDQLEF H TVQVQQQV++DAAI
Sbjct: 61  NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHQTVQVQQQVERDAAI 120

Query: 121 ARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLA 180
           ARLEQSRIVLAMRLAEHHGKNYKVI+EALAFVGDVRY AN+ SH  Q  PPF+PN +KL 
Sbjct: 121 ARLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLM 180

Query: 181 LNSSKRSNIVVKMLFSTLDIARKSLKLDNVGGILGNAALVAISMLAFLHMHHIAYKEPSP 240
            NSSKRSN ++KMLFST + A+KSLK+DNVGGIL NAA+VAISMLAFLH+H +A+K+ S 
Sbjct: 181 PNSSKRSNTLIKMLFSTFNFAKKSLKMDNVGGILSNAAMVAISMLAFLHLHQVAFKQSSQ 240

Query: 241 EKDDIPFNRNLRRTSRLEGSSPNEDFRNFDVLSARG 276
           E+DD PFNRNLRRTS+LEGSSPNED  NFDVLSARG
Sbjct: 241 ERDDNPFNRNLRRTSQLEGSSPNEDIGNFDVLSARG 276

BLAST of Carg20359 vs. TAIR10
Match: AT5G53280.1 (plastid division1)

HSP 1 Score: 229.2 bits (583), Expect = 3.1e-60
Identity = 130/273 (47.62%), Postives = 178/273 (65.20%), Query Frame = 0

Query: 4   DMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKPDTKDSKSPSARPTHNPA 63
           +MEIEEIE +LEKIWDLHDKLS+ IH I++ HFL S +   + + +  K+P      +  
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKR--KNPHGNSGEDKR 62

Query: 64  GPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDKDAAIARLE 123
               F++ F +  +DS IQEA+SLNAIRTALENLEDQLEFFHT+  QQ+ +KD AIARLE
Sbjct: 63  PGYVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLE 122

Query: 124 QSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLALNSS 183
           QSRI+LAMRLAEHHGKNY V+ EALAFVG ++  ++Y S          P+    ++   
Sbjct: 123 QSRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGAN-SIPDG 182

Query: 184 KRSNIVVKMLFSTLDIARKSLKLDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPEKDD 243
             SN V+    ST   A+++L  ++V G+LGNAA+ AIS++A LH+H +A  E   +K +
Sbjct: 183 IESNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKKE 242

Query: 244 IPFNRN-LRRTSRLEGSSPNEDFRNFDVLSARG 276
             F R+  R+T   + SS +    + DV+ ARG
Sbjct: 243 DRFYRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

BLAST of Carg20359 vs. TAIR10
Match: AT2G16070.2 (plastid division2)

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06
Identity = 48/151 (31.79%), Postives = 74/151 (49.01%), Query Frame = 0

Query: 5   MEIEE-IEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKPDTKDSKSPSARPTHNPA 64
           ME EE I +IL +  +L  K+S+ I +       +ST      D  +  SP         
Sbjct: 1   MEDEEGIGLILARATELRLKISDCIDN-------SSTTVSDNGDGNEDLSPGEGRKSEII 60

Query: 65  GPSPFVRDF-RIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDKDAAIARL 124
           G     +DF  I  +D    EA  L  IR ALE LE QL     ++ +QQ +K  A++ +
Sbjct: 61  GNQD--KDFDSISSEDVDEAEAERLLRIRDALEALESQLASLQNLRQRQQYEKQLALSEI 120

Query: 125 EQSRIVLAMRLAEHHGKNYKVISEALAFVGD 154
           + SR +L  +L E+ GK+++V+ E   F G+
Sbjct: 121 DYSRKMLLEKLKEYKGKDFEVLRETTTFAGE 142

BLAST of Carg20359 vs. Swiss-Prot
Match: sp|Q9FK13|PDV1_ARATH (Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.6e-59
Identity = 130/273 (47.62%), Postives = 178/273 (65.20%), Query Frame = 0

Query: 4   DMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKPDTKDSKSPSARPTHNPA 63
           +MEIEEIE +LEKIWDLHDKLS+ IH I++ HFL S +   + + +  K+P      +  
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKR--KNPHGNSGEDKR 62

Query: 64  GPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDKDAAIARLE 123
               F++ F +  +DS IQEA+SLNAIRTALENLEDQLEFFHT+  QQ+ +KD AIARLE
Sbjct: 63  PGYVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLE 122

Query: 124 QSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLALNSS 183
           QSRI+LAMRLAEHHGKNY V+ EALAFVG ++  ++Y S          P+    ++   
Sbjct: 123 QSRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGAN-SIPDG 182

Query: 184 KRSNIVVKMLFSTLDIARKSLKLDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPEKDD 243
             SN V+    ST   A+++L  ++V G+LGNAA+ AIS++A LH+H +A  E   +K +
Sbjct: 183 IESNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKKE 242

Query: 244 IPFNRN-LRRTSRLEGSSPNEDFRNFDVLSARG 276
             F R+  R+T   + SS +    + DV+ ARG
Sbjct: 243 DRFYRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

BLAST of Carg20359 vs. Swiss-Prot
Match: sp|Q9XII1|PDV2_ARATH (Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.7e-05
Identity = 48/151 (31.79%), Postives = 74/151 (49.01%), Query Frame = 0

Query: 5   MEIEE-IEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKPDTKDSKSPSARPTHNPA 64
           ME EE I +IL +  +L  K+S+ I +       +ST      D  +  SP         
Sbjct: 1   MEDEEGIGLILARATELRLKISDCIDN-------SSTTVSDNGDGNEDLSPGEGRKSEII 60

Query: 65  GPSPFVRDF-RIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDKDAAIARL 124
           G     +DF  I  +D    EA  L  IR ALE LE QL     ++ +QQ +K  A++ +
Sbjct: 61  GNQD--KDFDSISSEDVDEAEAERLLRIRDALEALESQLASLQNLRQRQQYEKQLALSEI 120

Query: 125 EQSRIVLAMRLAEHHGKNYKVISEALAFVGD 154
           + SR +L  +L E+ GK+++V+ E   F G+
Sbjct: 121 DYSRKMLLEKLKEYKGKDFEVLRETTTFAGE 142

BLAST of Carg20359 vs. TrEMBL
Match: tr|A0A0A0LCS6|A0A0A0LCS6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G357100 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 2.7e-106
Identity = 206/278 (74.10%), Postives = 231/278 (83.09%), Query Frame = 0

Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKPDTKDSKSPSARPTH 60
           MKWDMEIEEIE +LEKIWDLHDKLSEAIHSI+RDHFL ST++LRK               
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSXXXXXXXXXXXXXX 60

Query: 61  NPAGPS---PFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDKDA 120
            P   +   PF+ +FR+ +DDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQV++DA
Sbjct: 61  XPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120

Query: 121 AIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEK 180
           AIARLEQSRI+LAMRLAEHHGKNYKVISEALAFVGDVRY ANY S   +D P F+PN +K
Sbjct: 121 AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK 180

Query: 181 LALNSSKRSNIVVKMLFSTLDIARKSLKLDNVGGILGNAALVAISMLAFLHMHHIAYKEP 240
              NSSKRSN ++KMLFSTLD ARKSLK+D+VGGILGNAA+VAISM+AFLH+H +AYK  
Sbjct: 181 PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAA 240

Query: 241 SPEKDDIPFNRNLRRTSRLEGSSPNEDFRNFDVLSARG 276
             E+DDIPFNRNLRRTSRL+ SS NEDF NFDVLSARG
Sbjct: 241 PLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 278

BLAST of Carg20359 vs. TrEMBL
Match: tr|A0A1S3AYK3|A0A1S3AYK3_CUCME (plastid division protein PDV1 OS=Cucumis melo OX=3656 GN=LOC103484150 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.3e-105
Identity = 206/279 (73.84%), Postives = 231/279 (82.80%), Query Frame = 0

Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKPDTKDSKSPSARPTH 60
           MKWDMEIEEIE +LEKIWDLHDKLSEAIHSI+RDHFLTST++LRK               
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKXXXXXXXXXXXXXXX 60

Query: 61  NPAGPS----PFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDKD 120
               P     PF+ +FR+ +DDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQV++D
Sbjct: 61  XIPLPHTAVFPFIDEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120

Query: 121 AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCE 180
           AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRY ANY SH  +D P F+P  +
Sbjct: 121 AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENKDGPKFSPKGQ 180

Query: 181 KLALNSSKRSNIVVKMLFSTLDIARKSLKLDNVGGILGNAALVAISMLAFLHMHHIAYKE 240
           K   NSSKRSN ++KMLFST+D ARKSLK+D+VGGILGNAA+VAISM+AFLH+H +AYK 
Sbjct: 181 KPLPNSSKRSNTLIKMLFSTIDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKV 240

Query: 241 PSPEKDDIPFNRNLRRTSRLEGSSPNEDFRNFDVLSARG 276
              E+DDIPF+RNLRRTSRL+ SS NEDF NFDVLSARG
Sbjct: 241 APLERDDIPFDRNLRRTSRLKESSSNEDFSNFDVLSARG 279

BLAST of Carg20359 vs. TrEMBL
Match: tr|A0A2N9EMK2|A0A2N9EMK2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3944 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.6e-82
Identity = 170/277 (61.37%), Postives = 207/277 (74.73%), Query Frame = 0

Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKPDTKDS-KSPSARPT 60
           MKWDME+EEIE ILEKIWDLHDKLS+AIHSI+R HFL S + LRKPD K    + +    
Sbjct: 1   MKWDMELEEIEAILEKIWDLHDKLSDAIHSISRTHFLNSVKALRKPDRKKPYNNENDAVD 60

Query: 61  HNPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDKDAAI 120
            N      FV+DFR+  +D A+QEA+SLNAIR+ALENLEDQLEFFHTVQ QQ+ ++DAAI
Sbjct: 61  DNGRAGFVFVKDFRVDENDLAVQEAKSLNAIRSALENLEDQLEFFHTVQTQQRAERDAAI 120

Query: 121 ARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLA 180
           ARLEQSRIVLAMRLA+HHGK YKVI EAL FVGDVR   ++ S      P ++P+ EK A
Sbjct: 121 ARLEQSRIVLAMRLADHHGKKYKVIEEALTFVGDVRDAGHFVSPENLYGPSYSPSGEKFA 180

Query: 181 LNSSKRSNIVVKMLFSTLDIARKSLKLDNVGGILGNAALVAISMLAFLHMHHIAYKE-PS 240
               KRSNI++K+LFS+ D  +KSLKLD+ GGILGNAALVA+SM+A L +H +AYKE P 
Sbjct: 181 SCEGKRSNILIKVLFSSFDFLKKSLKLDHTGGILGNAALVAVSMIALLQLHQVAYKEHPQ 240

Query: 241 PEKDDIPFNRNLRRTSRLEGSSPNEDFRNFDVLSARG 276
             +D+I  NRN+R+TS LEGSS N      DV + +G
Sbjct: 241 RCEDNIYNNRNVRQTSWLEGSSSNGRLSQLDVFAGKG 277

BLAST of Carg20359 vs. TrEMBL
Match: tr|A0A2P4MDN2|A0A2P4MDN2_QUESU (Plastid division protein pdv1 OS=Quercus suber OX=58331 GN=CFP56_35315 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.0e-81
Identity = 172/288 (59.72%), Postives = 210/288 (72.92%), Query Frame = 0

Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRK------------PDT 60
           MKWDME+EEIE ILEKIWDLHDKLS+AIHSI+R HFL S + LRK               
Sbjct: 1   MKWDMELEEIEAILEKIWDLHDKLSDAIHSISRTHFLNSVKALRKXXXXXXXXXXXXXXX 60

Query: 61  KDSKSPSARPTHNPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQ 120
           + +    A      AG   FV+DFR+  DDSAIQEA+SLNAIRTALENLEDQLEFFHTVQ
Sbjct: 61  QFNLENDAVEDTGRAG-FVFVKDFRVDDDDSAIQEAKSLNAIRTALENLEDQLEFFHTVQ 120

Query: 121 VQQQVDKDAAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDA 180
            QQ+ ++DAAIARLEQSRIVLAMRL+EHHGK YKVI EAL FVGDVR   ++ S      
Sbjct: 121 TQQRAERDAAIARLEQSRIVLAMRLSEHHGKKYKVIEEALTFVGDVRDGGHFVSPENLYG 180

Query: 181 PPFTPNCEKLALNSSKRSNIVVKMLFSTLDIARKSLKLDNVGGILGNAALVAISMLAFLH 240
           PPF+P+ EK   +  KRSNI++K+L S+ D  +KSLKLD++GGI+GNAALVA+SM+A+L 
Sbjct: 181 PPFSPSGEKFVSHEGKRSNILIKVLLSSFDFVKKSLKLDHMGGIVGNAALVAVSMIAWLQ 240

Query: 241 MHHIAYKE-PSPEKDDIPFNRNLRRTSRLEGSSPNEDFRNFDVLSARG 276
           +H +AYK+ P   +D+I  NRNLR+ S LEGSS +   R  DVL+ +G
Sbjct: 241 LHQVAYKQLPEKHEDNIYNNRNLRQASWLEGSSSDGRLRQLDVLAGKG 287

BLAST of Carg20359 vs. TrEMBL
Match: tr|A0A2I4GTZ0|A0A2I4GTZ0_9ROSI (plastid division protein PDV1 OS=Juglans regia OX=51240 GN=LOC109010866 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.9e-80
Identity = 166/284 (58.45%), Postives = 206/284 (72.54%), Query Frame = 0

Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKPDTKDSKSPSARPTH 60
           MKW+ME+EEIE ILEKIWDLHDKLS+AIHSI+R HFL S + + KP+     S + + +H
Sbjct: 1   MKWEMELEEIEAILEKIWDLHDKLSDAIHSISRTHFLNSVKAVTKPEKIKHPSYNCKNSH 60

Query: 61  NPAGPS-------PFVRDFRI-HVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQ 120
           N A           FV+DFR+   DDSA+QEA+SLNAIRTALENLEDQL+FFHTVQ+QQ+
Sbjct: 61  NDATEDNVRASGFVFVKDFRVDEGDDSAVQEAKSLNAIRTALENLEDQLDFFHTVQMQQR 120

Query: 121 VDKDAAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFT 180
            ++DAAIARLEQSRIVLAMRLAEHHGK +KVI EA+AFVGDV    ++ S  K    P++
Sbjct: 121 AERDAAIARLEQSRIVLAMRLAEHHGKKFKVIEEAMAFVGDVHDAGHFVSPEKLYGQPYS 180

Query: 181 PNCEKLALNSSKRSNIVVKMLFSTLDIARKSLKLDNVGGILGNAALVAISMLAFLHMHHI 240
           P  EKL  +   R NI++K+L S+ D A+KSLKLD +GGILGNAAL A+SM+A +H+H +
Sbjct: 181 PFGEKLVTHGDNRPNILIKVLISSFDFAKKSLKLDGMGGILGNAALFAVSMIALMHLHQV 240

Query: 241 AYKE-PSPEKDDIPFNRNLRRTSRLEGSSPNEDFRNFDVLSARG 276
            YKE P   +DDI   RN+R+T   E SS N      DVLS RG
Sbjct: 241 VYKEHPQKREDDITSKRNVRQTFWAEESSSNSHLSQLDVLSGRG 284

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023541198.14.3e-14898.18plastid division protein PDV1 [Cucurbita pepo subsp. pepo][more]
XP_022945966.15.6e-14898.91plastid division protein PDV1-like [Cucurbita moschata][more]
XP_022968214.11.2e-14798.18plastid division protein PDV1-like [Cucurbita maxima][more]
XP_022140820.13.7e-11577.45plastid division protein PDV1 isoform X2 [Momordica charantia][more]
XP_022140819.19.0e-11477.17plastid division protein PDV1 isoform X1 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT5G53280.13.1e-6047.62plastid division1[more]
AT2G16070.21.5e-0631.79plastid division2[more]
Match NameE-valueIdentityDescription
sp|Q9FK13|PDV1_ARATH5.6e-5947.62Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1[more]
sp|Q9XII1|PDV2_ARATH2.7e-0531.79Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0LCS6|A0A0A0LCS6_CUCSA2.7e-10674.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G357100 PE=4 SV=1[more]
tr|A0A1S3AYK3|A0A1S3AYK3_CUCME1.3e-10573.84plastid division protein PDV1 OS=Cucumis melo OX=3656 GN=LOC103484150 PE=4 SV=1[more]
tr|A0A2N9EMK2|A0A2N9EMK2_FAGSY1.6e-8261.37Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3944 PE=4 SV=1[more]
tr|A0A2P4MDN2|A0A2P4MDN2_QUESU3.0e-8159.72Plastid division protein pdv1 OS=Quercus suber OX=58331 GN=CFP56_35315 PE=4 SV=1[more]
tr|A0A2I4GTZ0|A0A2I4GTZ0_9ROSI1.9e-8058.45plastid division protein PDV1 OS=Juglans regia OX=51240 GN=LOC109010866 PE=4 SV=... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0010020chloroplast fission
Vocabulary: INTERPRO
TermDefinition
IPR038939PDV1/PDV2
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010020 chloroplast fission
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20359-RACarg20359-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..68
NoneNo IPR availablePANTHERPTHR33600:SF4SUBFAMILY NOT NAMEDcoord: 5..275
IPR038939Plastid division protein PDV1/PDV2PANTHERPTHR33600FAMILY NOT NAMEDcoord: 5..275

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg20359Carg15087Silver-seed gourdcarcarB503