Carg15087 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15087
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	plastid division protein PDV1
Location	Cucurbita_argyrosperma_scaffold_078 : 469449 .. 470891 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTATTTTCATTTTCTCTCTGTTTCCCTCCATGAAATGGGACATGGAGATCGAGGAGATCGAGGTTATCCTCGAGAAGATTTGGGACCTTCACGACAAGCTCAGTGAAGCAATTCACTCAATTTCCCGGCATCACTTCCTCACCTCCACCAAAAATCTCAGGAAATCGGACAAGGATTCCAAGACCCCCAATGGCGTACCCGACACTGCCGCCTTCCCTTTCATCAACGAATTTCGTAATGACCTTGATGATTCTGCCACTCAGGAGGCTAGAAGCCTAAATTCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATGTATGTTCACTTTTCTTTCCTTTTTTTTTTCCCCTATTTCGCGCTCCTTCTTTCATTCACCTAATTTTATCACTCTCAGTGAGTAATTTGAAGGAAGCCACAACAGGAAAACATTGATTCGATCTTATTGTGGGGATTCCCTACCTCTTTAGCTATGTTTCGGATTCAATAATGCTTTCCAATTGGAATTAAATCGCTAATTTATGATTTTCTGTGTTTTCTGCTGTCTGGAAGACTGAAAGGAACGACTATTAGGTTCACTATTCCTTGGCTTCCTTGATTTTTGTTATACGTCATTATCCAATTAGCCAAAATATGGGATAGAGTATGAATTTCTTGTAGCGTCTGCTTAGTTTAATCTCTGGTTATTGGAAGCTTGGGTAAATTATGATTTCAGGGAGTCTTGCAGGATTTTCCTTTTCATTTTTATGTTAAAATTTTACGCTCAGTACAATTAGGTCTAGCAATTAGCCACACAACTTTCCATTTTGATTTTCGAATAATGAAAAGATGTAATCACACAACACGGCTCTGTAAATCTATTCGAAATGATGAACAGATTCATATCAAATTTTGACAACTGACTCAGCGAATTCTTTCATTATGTTTGTAGACCGTGCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGGTGATCATCATGGCAAGAACTATAAAGTCATCAATGAAGCTTTAGCGTTTGTTGGAGATGTGCGTTATGCAGCTAACTACAATTCACATGAAAATCAATATGGTCAGAAGCCTGTGCCAAACAGTTCAAAGAGGTCTAATACTCTGATCAAAATGCTACTCTCATCTCTCAACTTTGCAAGGACATCCCTCAAAATGGATCATGTGGGCGGGGCACTTGGCAATGCTGCCATGGTTGCGATTAGCATGCTTGCATTTCTGCATCTGCACCAGGTGGTAGCATACAAGAAGCCACAGCTTGAGAGACATGATATTCCCTTCAACAGAAACCTTCCAAGAACTTCACGGCTCCAGGAGTCTTCCCCAAATGAAGATTTCAGCAACTTTGACGTGTTATCCGCAAGGGGTTAG

mRNA sequence

TTTCTATTTTCATTTTCTCTCTGTTTCCCTCCATGAAATGGGACATGGAGATCGAGGAGATCGAGGTTATCCTCGAGAAGATTTGGGACCTTCACGACAAGCTCAGTGAAGCAATTCACTCAATTTCCCGGCATCACTTCCTCACCTCCACCAAAAATCTCAGGAAATCGGACAAGGATTCCAAGACCCCCAATGGCGTACCCGACACTGCCGCCTTCCCTTTCATCAACGAATTTCGTAATGACCTTGATGATTCTGCCACTCAGGAGGCTAGAAGCCTAAATTCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATACCGTGCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGGTGATCATCATGGCAAGAACTATAAAGTCATCAATGAAGCTTTAGCGTTTGTTGGAGATGTGCGTTATGCAGCTAACTACAATTCACATGAAAATCAATATGGTCAGAAGCCTGTGCCAAACAGTTCAAAGAGGTCTAATACTCTGATCAAAATGCTACTCTCATCTCTCAACTTTGCAAGGACATCCCTCAAAATGGATCATGTGGGCGGGGCACTTGGCAATGCTGCCATGGTTGCGATTAGCATGCTTGCATTTCTGCATCTGCACCAGGTGGTAGCATACAAGAAGCCACAGCTTGAGAGACATGATATTCCCTTCAACAGAAACCTTCCAAGAACTTCACGGCTCCAGGAGTCTTCCCCAAATGAAGATTTCAGCAACTTTGACGTGTTATCCGCAAGGGGTTAG

Coding sequence (CDS)

ATGAAATGGGACATGGAGATCGAGGAGATCGAGGTTATCCTCGAGAAGATTTGGGACCTTCACGACAAGCTCAGTGAAGCAATTCACTCAATTTCCCGGCATCACTTCCTCACCTCCACCAAAAATCTCAGGAAATCGGACAAGGATTCCAAGACCCCCAATGGCGTACCCGACACTGCCGCCTTCCCTTTCATCAACGAATTTCGTAATGACCTTGATGATTCTGCCACTCAGGAGGCTAGAAGCCTAAATTCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATACCGTGCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGGTGATCATCATGGCAAGAACTATAAAGTCATCAATGAAGCTTTAGCGTTTGTTGGAGATGTGCGTTATGCAGCTAACTACAATTCACATGAAAATCAATATGGTCAGAAGCCTGTGCCAAACAGTTCAAAGAGGTCTAATACTCTGATCAAAATGCTACTCTCATCTCTCAACTTTGCAAGGACATCCCTCAAAATGGATCATGTGGGCGGGGCACTTGGCAATGCTGCCATGGTTGCGATTAGCATGCTTGCATTTCTGCATCTGCACCAGGTGGTAGCATACAAGAAGCCACAGCTTGAGAGACATGATATTCCCTTCAACAGAAACCTTCCAAGAACTTCACGGCTCCAGGAGTCTTCCCCAAATGAAGATTTCAGCAACTTTGACGTGTTATCCGCAAGGGGTTAG

Protein sequence

MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDKDSKTPNGVPDTAAFPFINEFRNDLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNSSKRSNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPQLERHDIPFNRNLPRTSRLQESSPNEDFSNFDVLSARG

Homology

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BLAST of Carg15087 vs. NCBI nr
Match: XP_022922902.1 (plastid division protein PDV1 [Cucurbita moschata])

HSP 1 Score: 508.8 bits (1309), Expect = 1.1e-140
Identity = 263/266 (98.87%), Postives = 264/266 (99.25%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSD-KDSKTPNGVPDT 60
           MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSD KDSKTPNGVPDT
Sbjct: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDSKTPNGVPDT 60

Query: 61  AAFPFINEFRNDLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERDAAIARLE 120
           AAFPFINEFRNDLDDSATQEARSLN+IRTALENLEDQLEFFHTVQVQQQVERDAAIARLE
Sbjct: 61  AAFPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLE 120

Query: 121 QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNSSKRSNTLI 180
           QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNSSKRSNTLI
Sbjct: 121 QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNSSKRSNTLI 180

Query: 181 KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPQLERHDIPFNRN 240
           KMLLSSLNFARTSLKMDHV GALGNAAMVAISMLAFLHLHQVVAYKKPQLERHDIPFNRN
Sbjct: 181 KMLLSSLNFARTSLKMDHVSGALGNAAMVAISMLAFLHLHQVVAYKKPQLERHDIPFNRN 240

Query: 241 LPRTSRLQESSPNEDFSNFDVLSARG 266
           LPRTSRLQESSPNEDFSNFDVLSARG
Sbjct: 241 LPRTSRLQESSPNEDFSNFDVLSARG 266

[Close]

BLAST of Carg15087 vs. NCBI nr
Match: XP_022985171.1 (plastid division protein PDV1-like [Cucurbita maxima])

HSP 1 Score: 498.4 bits (1282), Expect = 1.5e-137
Identity = 257/266 (96.62%), Postives = 262/266 (98.50%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSD-KDSKTPNGVPDT 60
           MKWDMEIEEIEVIL KIWDLHDKLSEAIHSISRHHFLTSTKNLRKSD KD KTPNGVPDT
Sbjct: 1   MKWDMEIEEIEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDPKTPNGVPDT 60

Query: 61  AAFPFINEFRNDLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERDAAIARLE 120
           AAFPFINEFRNDLDDSATQEARSLN+IRTALENLEDQLEFFHTVQVQQQVERDAAIARLE
Sbjct: 61  AAFPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLE 120

Query: 121 QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNSSKRSNTLI 180
           QSRIVLA+RLGDHHGKNYKVINEALAFVGDVRY ANYNSHENQYGQKPVPNSSKRS+TLI
Sbjct: 121 QSRIVLAVRLGDHHGKNYKVINEALAFVGDVRYTANYNSHENQYGQKPVPNSSKRSSTLI 180

Query: 181 KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPQLERHDIPFNRN 240
           KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAY+KPQLERHDIPF+RN
Sbjct: 181 KMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYRKPQLERHDIPFDRN 240

Query: 241 LPRTSRLQESSPNEDFSNFDVLSARG 266
           LPRTSRLQESSPNEDFSNFDVLSARG
Sbjct: 241 LPRTSRLQESSPNEDFSNFDVLSARG 266

[Close]

BLAST of Carg15087 vs. NCBI nr
Match: XP_022140820.1 (plastid division protein PDV1 isoform X2 [Momordica charantia])

HSP 1 Score: 406.0 bits (1042), Expect = 9.9e-110
Identity = 221/276 (80.07%), Postives = 238/276 (86.23%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKS-DKDSKTPNGVPD- 60
           MKWDMEIEEIE +LEKIWD+HDKLSEAIHSISR HFLTSTKNLRKS +KDSKTPNG  D 
Sbjct: 1   MKWDMEIEEIEAVLEKIWDIHDKLSEAIHSISRDHFLTSTKNLRKSQNKDSKTPNGGADD 60

Query: 61  --TAAFPFINEFRNDLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERDAAIA 120
             +AAFPF+ EFR D+DDSA QEARSLN+IRTALENLEDQLEF HTVQVQQQVERDAAIA
Sbjct: 61  NPSAAFPFLKEFRIDIDDSAIQEARSLNAIRTALENLEDQLEFLHTVQVQQQVERDAAIA 120

Query: 121 RLEQSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQY-------GQKPVP 180
           RLEQSRIVLAMRL +HHGKNYKVINEALAFVGDVRY AN+ SHENQY       GQK +P
Sbjct: 121 RLEQSRIVLAMRLAEHHGKNYKVINEALAFVGDVRYEANFVSHENQYGPPFSPNGQKLMP 180

Query: 181 NSSKRSNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPQL 240
           NSSKRSNTLIKML S+ NFA+ SLKMD+VGG L NAAMVAISMLAFLHLHQ VA+K+   
Sbjct: 181 NSSKRSNTLIKMLFSTFNFAKKSLKMDNVGGILSNAAMVAISMLAFLHLHQ-VAFKQSSQ 240

Query: 241 ERHDIPFNRNLPRTSRLQESSPNEDFSNFDVLSARG 266
           ER D PFNRNL RTS+L+ SSPNED  NFDVLSARG
Sbjct: 241 ERDDNPFNRNLRRTSQLEGSSPNEDIGNFDVLSARG 275

[Close]

BLAST of Carg15087 vs. NCBI nr
Match: XP_008439328.2 (PREDICTED: plastid division protein PDV1 [Cucumis melo])

HSP 1 Score: 402.9 bits (1034), Expect = 8.4e-109
Identity = 221/280 (78.93%), Postives = 236/280 (84.29%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDKDSKTPNG----- 60
           MKWDMEIEEIE +LEKIWDLHDKLSEAIHSISR HFLTSTK+LRK               
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKXXXXXXXXXXXXXXX 60

Query: 61  ---VPDTAAFPFINEFRNDLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERD 120
              +P TA FPFI+EFR DLDDSA QEARSLN+IRTALENLEDQLEFFHTVQVQQQVERD
Sbjct: 61  XIPLPHTAVFPFIDEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120

Query: 121 AAIARLEQSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQ-------YGQ 180
           AAIARLEQSRIVLAMRL +HHGKNYKVI+EALAFVGDVRYAANY SHEN+        GQ
Sbjct: 121 AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENKDGPKFSPKGQ 180

Query: 181 KPVPNSSKRSNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYK 240
           KP+PNSSKRSNTLIKML S+++FAR SLKMDHVGG LGNAAMVAISM+AFLHLHQ VAYK
Sbjct: 181 KPLPNSSKRSNTLIKMLFSTIDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQ-VAYK 240

Query: 241 KPQLERHDIPFNRNLPRTSRLQESSPNEDFSNFDVLSARG 266
              LER DIPF+RNL RTSRL+ESS NEDFSNFDVLSARG
Sbjct: 241 VAPLERDDIPFDRNLRRTSRLKESSSNEDFSNFDVLSARG 279

[Close]

BLAST of Carg15087 vs. NCBI nr
Match: XP_004149455.1 (PREDICTED: plastid division protein PDV1 [Cucumis sativus] >KGN57871.1 hypothetical protein Csa_3G357100 [Cucumis sativus])

HSP 1 Score: 401.7 bits (1031), Expect = 1.9e-108
Identity = 221/279 (79.21%), Postives = 235/279 (84.23%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDKDSKTPNG----- 60
           MKWDMEIEEIE +LEKIWDLHDKLSEAIHSISR HFL STK+LRKS              
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSXXXXXXXXXXXXXX 60

Query: 61  --VPDTAAFPFINEFRNDLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERDA 120
             +P TA FPFI+EFR DLDDSA QEARSLN+IRTALENLEDQLEFFHTVQVQQQVERDA
Sbjct: 61  XPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120

Query: 121 AIARLEQSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQ-------YGQK 180
           AIARLEQSRI+LAMRL +HHGKNYKVI+EALAFVGDVRYAANY S EN+        GQK
Sbjct: 121 AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK 180

Query: 181 PVPNSSKRSNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKK 240
           P+PNSSKRSNTLIKML S+L+FAR SLKMDHVGG LGNAAMVAISM+AFLHLHQ VAYK 
Sbjct: 181 PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQ-VAYKA 240

Query: 241 PQLERHDIPFNRNLPRTSRLQESSPNEDFSNFDVLSARG 266
             LER DIPFNRNL RTSRL+ESS NEDFSNFDVLSARG
Sbjct: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 278

[Close]

BLAST of Carg15087 vs. TAIR10
Match: AT5G53280.1 (plastid division1)

HSP 1 Score: 230.7 bits (587), Expect = 1.0e-60
Identity = 133/271 (49.08%), Postives = 175/271 (64.58%), Query Frame = 0


Query: 4   DMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDKDSKTP---NGVPDTA 63
           +MEIEEIE +LEKIWDLHDKLS+ IH IS+ HFL S K   +S+K  K P   +G     
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEK-RKNPHGNSGEDKRP 62

Query: 64  AFPFINEFRNDLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQ 123
            + FI  F  D +DS  QEA+SLN+IRTALENLEDQLEFFHT+  QQ+ E+D AIARLEQ
Sbjct: 63  GYVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLEQ 122

Query: 124 SRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNSSK------R 183
           SRI+LAMRL +HHGKNY V+ EALAFVG ++  ++Y S ++ Y     P+ +        
Sbjct: 123 SRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGANSIPDGIE 182

Query: 184 SNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPQLERHDI 243
           SN +I    S+  FA+ +L  +HV G LGNAA+ AIS++A LHLHQV   +    ++ D 
Sbjct: 183 SNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKKEDR 242

Query: 244 PFNRNLPRTSRLQESSPNEDFSNFDVLSARG 266
            +     +T    +SS +    + DV+ ARG
Sbjct: 243 FYRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

[Close]

BLAST of Carg15087 vs. TAIR10
Match: AT2G16070.2 (plastid division2)

HSP 1 Score: 49.3 bits (116), Expect = 4.3e-06
Identity = 43/147 (29.25%), Postives = 73/147 (49.66%), Query Frame = 0


Query: 5   MEIEE-IEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDKDSKTPNGVPDTAAFP 64
           ME EE I +IL +  +L  K+S+ I + S     T+  +    ++D     G        
Sbjct: 1   MEDEEGIGLILARATELRLKISDCIDNSS-----TTVSDNGDGNEDLSPGEGRKSEIIGN 60

Query: 65  FINEFRN-DLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQSR 124
              +F +   +D    EA  L  IR ALE LE QL     ++ +QQ E+  A++ ++ SR
Sbjct: 61  QDKDFDSISSEDVDEAEAERLLRIRDALEALESQLASLQNLRQRQQYEKQLALSEIDYSR 120

Query: 125 IVLAMRLGDHHGKNYKVINEALAFVGD 150
            +L  +L ++ GK+++V+ E   F G+
Sbjct: 121 KMLLEKLKEYKGKDFEVLRETTTFAGE 142

[Close]

BLAST of Carg15087 vs. Swiss-Prot
Match: sp|Q9FK13|PDV1_ARATH (Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.9e-59
Identity = 133/271 (49.08%), Postives = 175/271 (64.58%), Query Frame = 0


Query: 4   DMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDKDSKTP---NGVPDTA 63
           +MEIEEIE +LEKIWDLHDKLS+ IH IS+ HFL S K   +S+K  K P   +G     
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEK-RKNPHGNSGEDKRP 62

Query: 64  AFPFINEFRNDLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQ 123
            + FI  F  D +DS  QEA+SLN+IRTALENLEDQLEFFHT+  QQ+ E+D AIARLEQ
Sbjct: 63  GYVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLEQ 122

Query: 124 SRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPNSSK------R 183
           SRI+LAMRL +HHGKNY V+ EALAFVG ++  ++Y S ++ Y     P+ +        
Sbjct: 123 SRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGANSIPDGIE 182

Query: 184 SNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPQLERHDI 243
           SN +I    S+  FA+ +L  +HV G LGNAA+ AIS++A LHLHQV   +    ++ D 
Sbjct: 183 SNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKKEDR 242

Query: 244 PFNRNLPRTSRLQESSPNEDFSNFDVLSARG 266
            +     +T    +SS +    + DV+ ARG
Sbjct: 243 FYRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

[Close]

BLAST of Carg15087 vs. Swiss-Prot
Match: sp|Q9XII1|PDV2_ARATH (Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 7.7e-05
Identity = 43/147 (29.25%), Postives = 73/147 (49.66%), Query Frame = 0


Query: 5   MEIEE-IEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDKDSKTPNGVPDTAAFP 64
           ME EE I +IL +  +L  K+S+ I + S     T+  +    ++D     G        
Sbjct: 1   MEDEEGIGLILARATELRLKISDCIDNSS-----TTVSDNGDGNEDLSPGEGRKSEIIGN 60

Query: 65  FINEFRN-DLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQSR 124
              +F +   +D    EA  L  IR ALE LE QL     ++ +QQ E+  A++ ++ SR
Sbjct: 61  QDKDFDSISSEDVDEAEAERLLRIRDALEALESQLASLQNLRQRQQYEKQLALSEIDYSR 120

Query: 125 IVLAMRLGDHHGKNYKVINEALAFVGD 150
            +L  +L ++ GK+++V+ E   F G+
Sbjct: 121 KMLLEKLKEYKGKDFEVLRETTTFAGE 142

[Close]

BLAST of Carg15087 vs. TrEMBL
Match: tr|A0A1S3AYK3|A0A1S3AYK3_CUCME (plastid division protein PDV1 OS=Cucumis melo OX=3656 GN=LOC103484150 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 5.6e-109
Identity = 221/280 (78.93%), Postives = 236/280 (84.29%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDKDSKTPNG----- 60
           MKWDMEIEEIE +LEKIWDLHDKLSEAIHSISR HFLTSTK+LRK               
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKXXXXXXXXXXXXXXX 60

Query: 61  ---VPDTAAFPFINEFRNDLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERD 120
              +P TA FPFI+EFR DLDDSA QEARSLN+IRTALENLEDQLEFFHTVQVQQQVERD
Sbjct: 61  XIPLPHTAVFPFIDEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120

Query: 121 AAIARLEQSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQ-------YGQ 180
           AAIARLEQSRIVLAMRL +HHGKNYKVI+EALAFVGDVRYAANY SHEN+        GQ
Sbjct: 121 AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENKDGPKFSPKGQ 180

Query: 181 KPVPNSSKRSNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYK 240
           KP+PNSSKRSNTLIKML S+++FAR SLKMDHVGG LGNAAMVAISM+AFLHLHQ VAYK
Sbjct: 181 KPLPNSSKRSNTLIKMLFSTIDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQ-VAYK 240

Query: 241 KPQLERHDIPFNRNLPRTSRLQESSPNEDFSNFDVLSARG 266
              LER DIPF+RNL RTSRL+ESS NEDFSNFDVLSARG
Sbjct: 241 VAPLERDDIPFDRNLRRTSRLKESSSNEDFSNFDVLSARG 279

[Close]

BLAST of Carg15087 vs. TrEMBL
Match: tr|A0A0A0LCS6|A0A0A0LCS6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G357100 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.2e-108
Identity = 221/279 (79.21%), Postives = 235/279 (84.23%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDKDSKTPNG----- 60
           MKWDMEIEEIE +LEKIWDLHDKLSEAIHSISR HFL STK+LRKS              
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSXXXXXXXXXXXXXX 60

Query: 61  --VPDTAAFPFINEFRNDLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERDA 120
             +P TA FPFI+EFR DLDDSA QEARSLN+IRTALENLEDQLEFFHTVQVQQQVERDA
Sbjct: 61  XPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120

Query: 121 AIARLEQSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQ-------YGQK 180
           AIARLEQSRI+LAMRL +HHGKNYKVI+EALAFVGDVRYAANY S EN+        GQK
Sbjct: 121 AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK 180

Query: 181 PVPNSSKRSNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKK 240
           P+PNSSKRSNTLIKML S+L+FAR SLKMDHVGG LGNAAMVAISM+AFLHLHQ VAYK 
Sbjct: 181 PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQ-VAYKA 240

Query: 241 PQLERHDIPFNRNLPRTSRLQESSPNEDFSNFDVLSARG 266
             LER DIPFNRNL RTSRL+ESS NEDFSNFDVLSARG
Sbjct: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 278

[Close]

BLAST of Carg15087 vs. TrEMBL
Match: tr|A0A2N9EMK2|A0A2N9EMK2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3944 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.3e-77
Identity = 170/277 (61.37%), Postives = 197/277 (71.12%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDKDSKTPN---GVP 60
           MKWDME+EEIE ILEKIWDLHDKLS+AIHSISR HFL S K LRK D+     N    V 
Sbjct: 1   MKWDMELEEIEAILEKIWDLHDKLSDAIHSISRTHFLNSVKALRKPDRKKPYNNENDAVD 60

Query: 61  DT--AAFPFINEFRNDLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERDAAI 120
           D   A F F+ +FR D +D A QEA+SLN+IR+ALENLEDQLEFFHTVQ QQ+ ERDAAI
Sbjct: 61  DNGRAGFVFVKDFRVDENDLAVQEAKSLNAIRSALENLEDQLEFFHTVQTQQRAERDAAI 120

Query: 121 ARLEQSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQYGQKPVPN----- 180
           ARLEQSRIVLAMRL DHHGK YKVI EAL FVGDVR A ++ S EN YG    P+     
Sbjct: 121 ARLEQSRIVLAMRLADHHGKKYKVIEEALTFVGDVRDAGHFVSPENLYGPSYSPSGEKFA 180

Query: 181 --SSKRSNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPQ 240
               KRSN LIK+L SS +F + SLK+DH GG LGNAA+VA+SM+A L LHQV   + PQ
Sbjct: 181 SCEGKRSNILIKVLFSSFDFLKKSLKLDHTGGILGNAALVAVSMIALLQLHQVAYKEHPQ 240

Query: 241 LERHDIPFNRNLPRTSRLQESSPNEDFSNFDVLSARG 266
               +I  NRN+ +TS L+ SS N   S  DV + +G
Sbjct: 241 RCEDNIYNNRNVRQTSWLEGSSSNGRLSQLDVFAGKG 277

[Close]

BLAST of Carg15087 vs. TrEMBL
Match: tr|A0A061G8R9|A0A061G8R9_THECC (Plastid division protein PDV1 OS=Theobroma cacao OX=3641 GN=TCM_015337 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.1e-76
Identity = 164/274 (59.85%), Postives = 198/274 (72.26%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDKDSKTPNGVPD-- 60
           MKWDMEIEEIE +LEKIWDLHDKLS+AIHSISR HFL S K LRKSDK     + V D  
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSIKALRKSDKKKLYNDAVGDDN 60

Query: 61  TAAFPFINEFRNDLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERDAAIARL 120
            A F F+ +FR D  +SA QEA+SLN+IRTALENLEDQLE FHTV  QQQ ERDAAIARL
Sbjct: 61  RAGFVFVKDFRIDDSESAIQEAKSLNAIRTALENLEDQLEIFHTVHTQQQAERDAAIARL 120

Query: 121 EQSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQY-------GQKPVPNS 180
           EQSRI+LA+RL +HHGK YKVI+EALAFVGDV  A+++ S EN Y       G+    + 
Sbjct: 121 EQSRIILALRLAEHHGKKYKVIDEALAFVGDVHDASHFVSPENLYSTPVSPSGENLASHE 180

Query: 181 SKRSNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPQLER 240
            KRSN LIK+L+SSLNFA+ SLK DH+GG L NAA+ A+SM+A LHLHQ+   +  + + 
Sbjct: 181 GKRSNILIKVLVSSLNFAKKSLKFDHMGGILSNAALFAVSMIAMLHLHQIAYTEHSEKQE 240

Query: 241 HDIPFNRNLPRTSRLQESSPNEDFSNFDVLSARG 266
            DI   R + + S+L   S  +  ++ DV SARG
Sbjct: 241 DDINRRRTVRKNSQLGGPSSYDCLNHLDVFSARG 274

[Close]

BLAST of Carg15087 vs. TrEMBL
Match: tr|A0A2C9UHN7|A0A2C9UHN7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G018900 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.1e-76
Identity = 163/273 (59.71%), Postives = 201/273 (73.63%), Query Frame = 0


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDKDSKTPNGVPDT- 60
           MKWDMEIEEIE +LEKIWDLHDKLS+AIHSISR HFL S +NLRKSDK   + +   +  
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSDAIHSISRIHFLNSVRNLRKSDKKKPSNDAAEENR 60

Query: 61  AAFPFINEFRNDLDDSATQEARSLNSIRTALENLEDQLEFFHTVQVQQQVERDAAIARLE 120
           + F F+ +FR   +DSA QEA+SLN+IRTALENLEDQLEFFHTVQ+QQ+ ERDAAIARLE
Sbjct: 61  SGFVFVKDFRVYDNDSAIQEAKSLNAIRTALENLEDQLEFFHTVQIQQRAERDAAIARLE 120

Query: 121 QSRIVLAMRLGDHHGKNYKVINEALAFVGDVRYAANYNSHENQY-------GQKPVPNSS 180
           QSRIVLAMRL +HHGK YKVI EALAFVGDVR A+ + S EN Y       G+  V +  
Sbjct: 121 QSRIVLAMRLAEHHGKKYKVIEEALAFVGDVRDASRFVSPENLYGASQCLSGENHVRHEE 180

Query: 181 KRSNTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYKKPQLERH 240
           K SN  IK+L+S L++ R SLK+DHVGG LGNAA+ A+SM+  LHLH   AYK+   ++ 
Sbjct: 181 KESNIAIKVLISGLDYVRKSLKLDHVGGLLGNAALFAVSMIVLLHLHP-EAYKEHPYKQE 240

Query: 241 DIPFNRNLPRTSRLQESSPNEDFSNFDVLSARG 266
            I  NRN+ +  + + SS + +  + DV+ ARG
Sbjct: 241 LIYDNRNVRKAPQAERSSSSVNLDHLDVMLARG 272

The following BLAST results are available for this feature:

BLAST of Carg15087 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922902.1	1.1e-140	98.87	plastid division protein PDV1 [Cucurbita moschata]	[more]
XP_022985171.1	1.5e-137	96.62	plastid division protein PDV1-like [Cucurbita maxima]	[more]
XP_022140820.1	9.9e-110	80.07	plastid division protein PDV1 isoform X2 [Momordica charantia]	[more]
XP_008439328.2	8.4e-109	78.93	PREDICTED: plastid division protein PDV1 [Cucumis melo]	[more]
XP_004149455.1	1.9e-108	79.21	PREDICTED: plastid division protein PDV1 [Cucumis sativus] >KGN57871.1 hypotheti...	[more]

BLAST of Carg15087 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53280.1	1.0e-60	49.08	plastid division1	[more]
AT2G16070.2	4.3e-06	29.25	plastid division2	[more]

BLAST of Carg15087 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FK13\|PDV1_ARATH	1.9e-59	49.08	Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1	[more]
sp\|Q9XII1\|PDV2_ARATH	7.7e-05	29.25	Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1	[more]

BLAST of Carg15087 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AYK3\|A0A1S3AYK3_CUCME	5.6e-109	78.93	plastid division protein PDV1 OS=Cucumis melo OX=3656 GN=LOC103484150 PE=4 SV=1	[more]
tr\|A0A0A0LCS6\|A0A0A0LCS6_CUCSA	1.2e-108	79.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G357100 PE=4 SV=1	[more]
tr\|A0A2N9EMK2\|A0A2N9EMK2_FAGSY	3.3e-77	61.37	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3944 PE=4 SV=1	[more]
tr\|A0A061G8R9\|A0A061G8R9_THECC	2.1e-76	59.85	Plastid division protein PDV1 OS=Theobroma cacao OX=3641 GN=TCM_015337 PE=4 SV=1	[more]
tr\|A0A2C9UHN7\|A0A2C9UHN7_MANES	2.1e-76	59.71	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G018900 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0010020	chloroplast fission

Vocabulary: **INTERPRO**
Term	Definition
IPR038939	PDV1/PDV2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010020	chloroplast fission
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15087-RA	Carg15087-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 76..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..257
None	No IPR available	PANTHER	PTHR33600:SF4	SUBFAMILY NOT NAMED	coord: 5..265
IPR038939	Plastid division protein PDV1/PDV2	PANTHER	PTHR33600	FAMILY NOT NAMED	coord: 5..265

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15087	Cla004224	Watermelon (97103) v1	carwmB0990
Carg15087	Csa3G357100	Cucumber (Chinese Long) v2	carcuB1002
Carg15087	MELO3C006974	Melon (DHL92) v3.5.1	carmeB0966
Carg15087	ClCG05G008660	Watermelon (Charleston Gray)	carwcgB0965
Carg15087	CSPI03G22120	Wild cucumber (PI 183967)	carcpiB1025
Carg15087	Cucsa.012860	Cucumber (Gy14) v1	carcgyB1106
Carg15087	CmaCh18G012950	Cucurbita maxima (Rimu)	carcmaB1368
Carg15087	CmaCh16G000770	Cucurbita maxima (Rimu)	carcmaB1366
Carg15087	CmoCh18G013240	Cucurbita moschata (Rifu)	carcmoB1328
Carg15087	CmoCh16G000800	Cucurbita moschata (Rifu)	carcmoB1326
Carg15087	Lsi05G000700	Bottle gourd (USVL1VR-Ls)	carlsiB904
Carg15087	Cp4.1LG09g00410	Cucurbita pepo (Zucchini)	carcpeB1373
Carg15087	Cp4.1LG14g06610	Cucurbita pepo (Zucchini)	carcpeB1376
Carg15087	CsGy3G021190	Cucumber (Gy14) v2	carcgybB0977
Carg15087	MELO3C006974.2	Melon (DHL92) v3.6.1	carmedB0975
Carg15087	CsaV3_3G021850	Cucumber (Chinese Long) v3	carcucB1033
Carg15087	Cla97C05G090820	Watermelon (97103) v2	carwmbB1042
Carg15087	Bhi01G001063	Wax gourd	carwgoB1160

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15087	Carg20359	Silver-seed gourd	carcarB503

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15087	Cucumber (Chinese Long) v3	carcucB1035
Carg15087	Bottle gourd (USVL1VR-Ls)	carlsiB902
Carg15087	Melon (DHL92) v3.5.1	carmeB0962
Carg15087	Melon (DHL92) v3.6.1	carmedB0970
Carg15087	Watermelon (Charleston Gray)	carwcgB0963
Carg15087	Watermelon (Charleston Gray)	carwcgB0964
Carg15087	Watermelon (97103) v1	carwmB0991
Carg15087	Watermelon (97103) v2	carwmbB1040
Carg15087	Watermelon (97103) v2	carwmbB1041
Carg15087	Wax gourd	carwgoB1157
Carg15087	Silver-seed gourd	carcarB494
Carg15087	Cucumber (Gy14) v1	carcgyB1107
Carg15087	Cucumber (Gy14) v2	carcgybB0978
Carg15087	Cucurbita maxima (Rimu)	carcmaB1364
Carg15087	Cucurbita maxima (Rimu)	carcmaB1365
Carg15087	Cucurbita maxima (Rimu)	carcmaB1369
Carg15087	Cucurbita moschata (Rifu)	carcmoB1325
Carg15087	Cucurbita moschata (Rifu)	carcmoB1329
Carg15087	Cucurbita pepo (Zucchini)	carcpeB1375
Carg15087	Cucurbita pepo (Zucchini)	carcpeB1377
Carg15087	Wild cucumber (PI 183967)	carcpiB1029
Carg15087	Cucumber (Chinese Long) v2	carcuB1005