CmaCh18G012950 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G012950
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Plastid division protein PDV1
Location	Cma_Chr18 : 9984123 .. 9986787 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCAGATACCTTCCCCCAAACAAATCCTTCTCCATTCTTCTCTTCTTCCCTCTCTGTCTCTCCCTTTCCCGCCATGAAATGGGACATGGAAATCGAGGAAATCGAGGTTATCCTCGAGAAGATTTGGGACCTTCACGATAAGCTCAGTGAAGCTATTCACTCGATTACCCGAGACCACTTCCTCACCTCCACCCAAAATCTCAGGAAATCCGACACCAAGGATTCCAAGTCCCCCAGTGACCGACCCACTCACAACCCTGCTGGCCCCTCCCCTTTCGTCAGGGACTTCCGGATCCACGTCGATGATTCAGCTATCCAGGAGGCCAGAAGTCTAAACGCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTTGAATTTTTCCATGTATGTTGATTTTTTGCCCAATTCCGTGCGCTTCTTTTAATTAATTAACGCCTATTCTATTTCTTATCGATGACGAATTTGACGGAAGAGACAACAGGAAATCCTTGTTTCGATCCTTTTGGGGGATCCATTATTACCCGAATCAACAGATTATGTACTGTTAGCTTGGTTTGCGGTTTAATTCAGTGTTCTTACCTCCCAATCGGAATTACATCTTTAATTTATGATTTTATGTGTTTTCTGCTCTCTGAAAAATTGAAAACAGGAATCTTAAATTCATTTTCCTTAATTTGTGTTCAACGCCATTGTTCAATTAGCTTAAAGATGGGAATGTGTTAATTTCTTGTCGCGTCTGTTTGTCTTGGTCTCTGGTTATTGTAAGCTTTTTGTTGTTCCATCATTTAGAGGGTTAAGCGGGAAAGAAAGCTTGCTGTTGAGATAATTTGAATGCAATAGTTATGTTACTTGGTCTTGTTTCAACTTCTAAATCATGATTCAGGGAGCTTTACAGGATGTTCCTTTTTCATTTTTTCATTAAGATTATACGCTAAGCCGAACTATCTAGCAATTGTGTGTCAATCAGAATGTCAATACAGCTACAAATTTTCTATTTTAATGTTCTTGAAGCCATAAGTGTTCTTGAATTTCTTACGGCTGTTTAGGATGGTTTCCAGAAAAACGAAGTTGTCTTCTATGAATGAACTGCTTTTTAGATCAATGGAAGTTTGTCATCCCTGCAGAAATCATGGGCAGATACCAAATTTTTACCAGTCATTTAGTGATTAGTTAAAACAAGCTCAGCAAATTGTTTCAAAGACAATCTTCTGAACAAGGTTGAGTGTGAGATCCTACATTGGTTTGAGAGGGGAACGAAGCATTCCTTATGAAGGTGTAGAAACCCCTCCTTAGTATACGCGTTTTAAAATCATGAGGTTGACGGTGATACATAACAGGCCAAAGCGGACAATATGTACTAGCGGTGGATTTAGGTTGTTACAAATGTTGTTAGAGTTAGGCACCGAGCAGTGTGCCAGCAAGGATGCTGGGTCCCAAGAGGGGTGGACTGTGAGAACCCACATCGGTTGGAAAGGGGAACGAAGCATTCCTCATAAGGGTGTGGAAACCTCTTCCTAATAGACGCATTAAAAAACCGTAAGACTGATGACGTTACGTAATGGGCTAAAACGAACAATATCTGCTAACGATGGACTTGGGCTATTACATTGAGTTTCTTCTTCATATTCATAGGACGAACAAAACATAGATACTTAGCGTAGAGAAGACCTTTAATGCAAACATAGATGCTTCAGTTTGAAATGAAAGCAGTAATGAACAGCATTCTTTTATTTCTTCTTGCCTGTGGGGTTACGATGATAAGTATTTCATTAGGGGGAACATATTATTTTTTGTCTTGACAATCTCTTTGGCGAATTCATTGTTTCGATTTTGCAGACCGTGCAAGTGCAACAACAGGTTGATAGAGATGCTGCTATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGCCGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCCTTAGCGTTTGTTGGAGATGTACGTTATCCTGCTAACTATGCTTCGCATGGGAAACAAGATGCTCCACCATTTACCCCAAATTGTGAGAAGCTTGCATTGAACAGTTCAAAGAGGTCTAATATTGTTGTCAAGATGCTATTCTCAACTCTCGACATTGCGAGAAAATCCCTCAAAATGGATAATGTGGGCGGGATACTTGGCAATGCTGCCCTGGTTGCAATCAGCATGCTTGCATTTCTGCATATGCACCATATAGCATACAAGGAGCCATCACCTGAGAAAGACGATATTCCCTTCAACAGAAATCTTCAGAGAACATCTCGGCTCGAAGGATCTTCCCCGAATGAAGATTTCCGCAACTTCGACGTGTTATCAGCTAGGGGTTAGTGTGAATATATTAAACTTTTCAAGCTTTGATGCATCTCTTATCTGCTTCACTAAATGTCAGCTGCTTATCCTGTGGAATGAGTCAAATATGATCATGTCTGTTGTATGAAAATTATTTGATTTAGTTGTTAGAAGTTTCATCACCATTCTTGAGGTTGTCATGTGTAGTGGATGATAGAGAGTTTTAAGTCTTCTCCATTGAGTTGTTCAACAAACAAACCTTTAGTTCAAGATTTGTGAAGTGATCAAGTAAAGGACATGTCCATTGGGCCTGAATACAATTCTCTCCCCCATTAGATCCTGACCTTGAG

mRNA sequence

CTTCAGATACCTTCCCCCAAACAAATCCTTCTCCATTCTTCTCTTCTTCCCTCTCTGTCTCTCCCTTTCCCGCCATGAAATGGGACATGGAAATCGAGGAAATCGAGGTTATCCTCGAGAAGATTTGGGACCTTCACGATAAGCTCAGTGAAGCTATTCACTCGATTACCCGAGACCACTTCCTCACCTCCACCCAAAATCTCAGGAAATCCGACACCAAGGATTCCAAGTCCCCCAGTGACCGACCCACTCACAACCCTGCTGGCCCCTCCCCTTTCGTCAGGGACTTCCGGATCCACGTCGATGATTCAGCTATCCAGGAGGCCAGAAGTCTAAACGCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTTGAATTTTTCCATACCGTGCAAGTGCAACAACAGGTTGATAGAGATGCTGCTATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGCCGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCCTTAGCGTTTGTTGGAGATGTACGTTATCCTGCTAACTATGCTTCGCATGGGAAACAAGATGCTCCACCATTTACCCCAAATTGTGAGAAGCTTGCATTGAACAGTTCAAAGAGGTCTAATATTGTTGTCAAGATGCTATTCTCAACTCTCGACATTGCGAGAAAATCCCTCAAAATGGATAATGTGGGCGGGATACTTGGCAATGCTGCCCTGGTTGCAATCAGCATGCTTGCATTTCTGCATATGCACCATATAGCATACAAGGAGCCATCACCTGAGAAAGACGATATTCCCTTCAACAGAAATCTTCAGAGAACATCTCGGCTCGAAGGATCTTCCCCGAATGAAGATTTCCGCAACTTCGACGTGTTATCAGCTAGGGGTTAGTGTGAATATATTAAACTTTTCAAGCTTTGATGCATCTCTTATCTGCTTCACTAAATGTCAGCTGCTTATCCTGTGGAATGAGTCAAATATGATCATGTCTGTTGTATGAAAATTATTTGATTTAGTTGTTAGAAGTTTCATCACCATTCTTGAGGTTGTCATGTGTAGTGGATGATAGAGAGTTTTAAGTCTTCTCCATTGAGTTGTTCAACAAACAAACCTTTAGTTCAAGATTTGTGAAGTGATCAAGTAAAGGACATGTCCATTGGGCCTGAATACAATTCTCTCCCCCATTAGATCCTGACCTTGAG

Coding sequence (CDS)

ATGAAATGGGACATGGAAATCGAGGAAATCGAGGTTATCCTCGAGAAGATTTGGGACCTTCACGATAAGCTCAGTGAAGCTATTCACTCGATTACCCGAGACCACTTCCTCACCTCCACCCAAAATCTCAGGAAATCCGACACCAAGGATTCCAAGTCCCCCAGTGACCGACCCACTCACAACCCTGCTGGCCCCTCCCCTTTCGTCAGGGACTTCCGGATCCACGTCGATGATTCAGCTATCCAGGAGGCCAGAAGTCTAAACGCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTTGAATTTTTCCATACCGTGCAAGTGCAACAACAGGTTGATAGAGATGCTGCTATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAATGAGATTGGCCGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCCTTAGCGTTTGTTGGAGATGTACGTTATCCTGCTAACTATGCTTCGCATGGGAAACAAGATGCTCCACCATTTACCCCAAATTGTGAGAAGCTTGCATTGAACAGTTCAAAGAGGTCTAATATTGTTGTCAAGATGCTATTCTCAACTCTCGACATTGCGAGAAAATCCCTCAAAATGGATAATGTGGGCGGGATACTTGGCAATGCTGCCCTGGTTGCAATCAGCATGCTTGCATTTCTGCATATGCACCATATAGCATACAAGGAGCCATCACCTGAGAAAGACGATATTCCCTTCAACAGAAATCTTCAGAGAACATCTCGGCTCGAAGGATCTTCCCCGAATGAAGATTTCCGCAACTTCGACGTGTTATCAGCTAGGGGTTAG

Protein sequence

MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSDRPTHNPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDAAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLALNSSKRSNIVVKMLFSTLDIARKSLKMDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPEKDDIPFNRNLQRTSRLEGSSPNEDFRNFDVLSARG

Homology

[Close]

BLAST of CmaCh18G012950 vs. Swiss-Prot
Match: PDV1_ARATH (Plastid division protein PDV1 OS=Arabidopsis thaliana GN=PDV1 PE=1 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.5e-59
Identity = 131/273 (47.99%), Postives = 179/273 (65.57%), Query Frame = 1


Query: 4   DMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSDRPTHNPA 63
           +MEIEEIE +LEKIWDLHDKLS+ IH I++ HFL S +   +S+ +  K+P      +  
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKR--KNPHGNSGEDKR 62

Query: 64  GPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDAAIARLE 123
               F++ F +  +DS IQEA+SLNAIRTALENLEDQLEFFHT+  QQ+ ++D AIARLE
Sbjct: 63  PGYVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLE 122

Query: 124 QSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLALNSS 183
           QSRI+LAMRLAEHHGKNY V+ EALAFVG ++  ++Y S          P+    ++   
Sbjct: 123 QSRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGAN-SIPDG 182

Query: 184 KRSNIVVKMLFSTLDIARKSLKMDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPEKDD 243
             SN V+    ST   A+++L  ++V G+LGNAA+ AIS++A LH+H +A  E   +K +
Sbjct: 183 IESNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKKE 242

Query: 244 IPFNRNLQR-TSRLEGSSPNEDFRNFDVLSARG 276
             F R+ QR T   + SS +    + DV+ ARG
Sbjct: 243 DRFYRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

[Close]

BLAST of CmaCh18G012950 vs. TrEMBL
Match: A0A0A0LCS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357100 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.1e-109
Identity = 210/278 (75.54%), Postives = 237/278 (85.25%), Query Frame = 1


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSDRPTH 60
           MKWDMEIEEIE +LEKIWDLHDKLSEAIHSI+RDHFL ST++LRKSD  ++ +     T 
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNKDSNNTP 60

Query: 61  NPAGPS---PFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDA 120
            P   +   PF+ +FR+ +DDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQV+RDA
Sbjct: 61  IPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120

Query: 121 AIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEK 180
           AIARLEQSRI+LAMRLAEHHGKNYKVISEALAFVGDVRY ANY S   +D P F+PN +K
Sbjct: 121 AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK 180

Query: 181 LALNSSKRSNIVVKMLFSTLDIARKSLKMDNVGGILGNAALVAISMLAFLHMHHIAYKEP 240
              NSSKRSN ++KMLFSTLD ARKSLKMD+VGGILGNAA+VAISM+AFLH+H +AYK  
Sbjct: 181 PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAA 240

Query: 241 SPEKDDIPFNRNLQRTSRLEGSSPNEDFRNFDVLSARG 276
             E+DDIPFNRNL+RTSRL+ SS NEDF NFDVLSARG
Sbjct: 241 PLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 278

[Close]

BLAST of CmaCh18G012950 vs. TrEMBL
Match: A0A061G8R9_THECC (Plastid division protein PDV1 OS=Theobroma cacao GN=TCM_015337 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.2e-79
Identity = 168/276 (60.87%), Postives = 206/276 (74.64%), Query Frame = 1


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSDRPTH 60
           MKWDMEIEEIE +LEKIWDLHDKLS+AIHSI+R HFL S + LRKSD K  K  +D    
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSIKALRKSDKK--KLYNDAVGD 60

Query: 61  NPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDAAIA 120
           +      FV+DFRI   +SAIQEA+SLNAIRTALENLEDQLE FHTV  QQQ +RDAAIA
Sbjct: 61  DNRAGFVFVKDFRIDDSESAIQEAKSLNAIRTALENLEDQLEIFHTVHTQQQAERDAAIA 120

Query: 121 RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLAL 180
           RLEQSRI+LA+RLAEHHGK YKVI EALAFVGDV   +++ S     + P +P+ E LA 
Sbjct: 121 RLEQSRIILALRLAEHHGKKYKVIDEALAFVGDVHDASHFVSPENLYSTPVSPSGENLAS 180

Query: 181 NSSKRSNIVVKMLFSTLDIARKSLKMDNVGGILGNAALVAISMLAFLHMHHIAYKEPS-P 240
           +  KRSNI++K+L S+L+ A+KSLK D++GGIL NAAL A+SM+A LH+H IAY E S  
Sbjct: 181 HEGKRSNILIKVLVSSLNFAKKSLKFDHMGGILSNAALFAVSMIAMLHLHQIAYTEHSEK 240

Query: 241 EKDDIPFNRNLQRTSRLEGSSPNEDFRNFDVLSARG 276
           ++DDI   R +++ S+L G S  +   + DV SARG
Sbjct: 241 QEDDINRRRTVRKNSQLGGPSSYDCLNHLDVFSARG 274

[Close]

BLAST of CmaCh18G012950 vs. TrEMBL
Match: E0CUK8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02390 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 3.1e-77
Identity = 164/277 (59.21%), Postives = 202/277 (72.92%), Query Frame = 1


Query: 5   MEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSDRPTHNPAG 64
           MEIEEIE ILEKIWDLHDKLS+AIHSI+R HFL S ++LRKSD      P +    N  G
Sbjct: 1   MEIEEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKSD---KSKPLNDVDENRFG 60

Query: 65  PSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDAAIARLEQ 124
              + +DFR+  DD AIQEA+SLNAIRTALENLEDQLEFFHTVQV QQ +RDAAIARLEQ
Sbjct: 61  -FVYAKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAERDAAIARLEQ 120

Query: 125 SRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLALNSSK 184
           SRIVLA+RL+EHHGK YKVI EA+AFVGDVR    +        PP +P  + +A +  K
Sbjct: 121 SRIVLAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPGKNVAPHEEK 180

Query: 185 RSNIVVKMLFSTLDIARKSLKMDNVGGILGNAALVAISMLAFLHMHHIAYKE------PS 244
           RSN ++K+L S  +  +KSLK+D++GGILGNAALVA+SMLA LH++ + YK+      P 
Sbjct: 181 RSNFLIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYKDKIVLEPPQ 240

Query: 245 PEKDDIPFNRNLQRTSRLEGSSPNEDFRNFDVLSARG 276
             +D+I  NRN++RTSR+E SS + +    DVL ARG
Sbjct: 241 KREDNIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 273

[Close]

BLAST of CmaCh18G012950 vs. TrEMBL
Match: A0A0D2TDP8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G271100 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.7e-75
Identity = 156/275 (56.73%), Postives = 203/275 (73.82%), Query Frame = 1


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSDRPTH 60
           MKWDMEIEEIE +LEKIWDLHDKLS+AIHSI+R HFL S + L++SD K   +       
Sbjct: 4   MKWDMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSIKALKESDKKKLYNDVVVGAD 63

Query: 61  NPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDAAIA 120
           +      +V++FRI   DSAIQEA+SLNAIRTALENLEDQLEFFHTVQ+QQ+V+RDAAIA
Sbjct: 64  DNRTGFVYVKEFRIDDGDSAIQEAKSLNAIRTALENLEDQLEFFHTVQIQQRVERDAAIA 123

Query: 121 RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLAL 180
           RLEQSRI+LA+RLA+HHGK YKVI EALAFVGDV   + Y S       P +P+ E LA 
Sbjct: 124 RLEQSRIILALRLADHHGKKYKVIDEALAFVGDVHDASRYISPKNLYCSPISPSGENLAS 183

Query: 181 NSSKRSNIVVKMLFSTLDIARKSLKMDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPE 240
           +  K +N+++K++ S+ + A+KSLK D++GGIL NAA+ A+SM+A +H+H IA+ +  PE
Sbjct: 184 HEGKHTNMLIKLIVSSFNYAKKSLKFDHMGGILSNAAIFAVSMIAMMHLHQIAFTDGRPE 243

Query: 241 KDDIPFNRNLQRTSRLEGSSPNEDFRNFDVLSARG 276
            ++I   RN ++ S+LEG S  +   + DV  ARG
Sbjct: 244 -ENINNRRNPRKNSQLEGPSSYDHSSHLDVYLARG 277

[Close]

BLAST of CmaCh18G012950 vs. TrEMBL
Match: A0A067JRN3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26010 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 5.0e-75
Identity = 160/272 (58.82%), Postives = 199/272 (73.16%), Query Frame = 1


Query: 5   MEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSDRPTHNPAG 64
           MEIEEIE +LEKIWDLHDKLS+AIHSI+R HFL S +NLRKSD K   +     T +   
Sbjct: 1   MEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSVRNLRKSDKKKLNNDDVEDTRSGF- 60

Query: 65  PSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDAAIARLEQ 124
              FV+DFR+  +D AIQEA+SLNAIRTALENLEDQLEFFHTVQ+QQ+ +RDAAIARLEQ
Sbjct: 61  --VFVKDFRVDDNDFAIQEAKSLNAIRTALENLEDQLEFFHTVQIQQRAERDAAIARLEQ 120

Query: 125 SRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLALNSSK 184
           SRIVLAMRLAEHHGK YKV+ EALAFVGDV   +++ S          P+ +KL     +
Sbjct: 121 SRIVLAMRLAEHHGKKYKVLEEALAFVGDVHDASDFVSPENLYGSSLNPSDQKLD-RCDQ 180

Query: 185 RSNIVVKMLFSTLDIARKSLKMDNVGGILGNAALVAISMLAFLHMHHIAYKE-PSPEKDD 244
            SNIV+K+L S+ D  R SLK D +GG+LGNAA+ A+SMLA LH+H +AYKE P  +++ 
Sbjct: 181 GSNIVMKVLISSFDFVRTSLKWDQMGGMLGNAAVFAVSMLALLHLHQVAYKEHPYKQEEL 240

Query: 245 IPFNRNLQRTSRLEGSSPNEDFRNFDVLSARG 276
           I  NRN+ +  +++GSS N +    DV+ ARG
Sbjct: 241 IYRNRNVSKAPQIDGSSSNGNLNRLDVMLARG 268

[Close]

BLAST of CmaCh18G012950 vs. TAIR10
Match: AT5G53280.1 (AT5G53280.1 plastid division1)

HSP 1 Score: 230.3 bits (586), Expect = 1.4e-60
Identity = 131/273 (47.99%), Postives = 179/273 (65.57%), Query Frame = 1


Query: 4   DMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSDRPTHNPA 63
           +MEIEEIE +LEKIWDLHDKLS+ IH I++ HFL S +   +S+ +  K+P      +  
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKR--KNPHGNSGEDKR 62

Query: 64  GPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDAAIARLE 123
               F++ F +  +DS IQEA+SLNAIRTALENLEDQLEFFHT+  QQ+ ++D AIARLE
Sbjct: 63  PGYVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLE 122

Query: 124 QSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLALNSS 183
           QSRI+LAMRLAEHHGKNY V+ EALAFVG ++  ++Y S          P+    ++   
Sbjct: 123 QSRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGAN-SIPDG 182

Query: 184 KRSNIVVKMLFSTLDIARKSLKMDNVGGILGNAALVAISMLAFLHMHHIAYKEPSPEKDD 243
             SN V+    ST   A+++L  ++V G+LGNAA+ AIS++A LH+H +A  E   +K +
Sbjct: 183 IESNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKKE 242

Query: 244 IPFNRNLQR-TSRLEGSSPNEDFRNFDVLSARG 276
             F R+ QR T   + SS +    + DV+ ARG
Sbjct: 243 DRFYRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

[Close]

BLAST of CmaCh18G012950 vs. TAIR10
Match: AT2G16070.2 (AT2G16070.2 plastid division2)

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06
Identity = 47/151 (31.13%), Postives = 75/151 (49.67%), Query Frame = 1


Query: 5   MEIEE-IEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSDRPTHNPA 64
           ME EE I +IL +  +L  K+S+ I +       +ST      D  +  SP +       
Sbjct: 1   MEDEEGIGLILARATELRLKISDCIDN-------SSTTVSDNGDGNEDLSPGEGRKSEII 60

Query: 65  GPSPFVRDF-RIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDAAIARL 124
           G     +DF  I  +D    EA  L  IR ALE LE QL     ++ +QQ ++  A++ +
Sbjct: 61  GNQD--KDFDSISSEDVDEAEAERLLRIRDALEALESQLASLQNLRQRQQYEKQLALSEI 120

Query: 125 EQSRIVLAMRLAEHHGKNYKVISEALAFVGD 154
           + SR +L  +L E+ GK+++V+ E   F G+
Sbjct: 121 DYSRKMLLEKLKEYKGKDFEVLRETTTFAGE 142

[Close]

BLAST of CmaCh18G012950 vs. NCBI nr
Match: gi|449463466|ref|XP_004149455.1| (PREDICTED: plastid division protein PDV1 [Cucumis sativus])

HSP 1 Score: 404.4 bits (1038), Expect = 1.5e-109
Identity = 210/278 (75.54%), Postives = 237/278 (85.25%), Query Frame = 1


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSDRPTH 60
           MKWDMEIEEIE +LEKIWDLHDKLSEAIHSI+RDHFL ST++LRKSD  ++ +     T 
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNKDSNNTP 60

Query: 61  NPAGPS---PFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDA 120
            P   +   PF+ +FR+ +DDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQV+RDA
Sbjct: 61  IPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120

Query: 121 AIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEK 180
           AIARLEQSRI+LAMRLAEHHGKNYKVISEALAFVGDVRY ANY S   +D P F+PN +K
Sbjct: 121 AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK 180

Query: 181 LALNSSKRSNIVVKMLFSTLDIARKSLKMDNVGGILGNAALVAISMLAFLHMHHIAYKEP 240
              NSSKRSN ++KMLFSTLD ARKSLKMD+VGGILGNAA+VAISM+AFLH+H +AYK  
Sbjct: 181 PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAA 240

Query: 241 SPEKDDIPFNRNLQRTSRLEGSSPNEDFRNFDVLSARG 276
             E+DDIPFNRNL+RTSRL+ SS NEDF NFDVLSARG
Sbjct: 241 PLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 278

[Close]

BLAST of CmaCh18G012950 vs. NCBI nr
Match: gi|659077677|ref|XP_008439328.1| (PREDICTED: plastid division protein PDV1 [Cucumis melo])

HSP 1 Score: 402.9 bits (1034), Expect = 4.5e-109
Identity = 211/279 (75.63%), Postives = 239/279 (85.66%), Query Frame = 1


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDS---KSPSDR 60
           MKWDMEIEEIE +LEKIWDLHDKLSEAIHSI+RDHFLTST++LRKSD  ++   K  ++ 
Sbjct: 32  MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSDNNNNNNNKDSNNA 91

Query: 61  PTHNP-AGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRD 120
           P   P     PF+ +FR+ +DDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQV+RD
Sbjct: 92  PIPLPHTAVFPFIDEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 151

Query: 121 AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCE 180
           AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRY ANY SH  +D P F+P  +
Sbjct: 152 AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENKDGPKFSPKGQ 211

Query: 181 KLALNSSKRSNIVVKMLFSTLDIARKSLKMDNVGGILGNAALVAISMLAFLHMHHIAYKE 240
           K   NSSKRSN ++KMLFST+D ARKSLKMD+VGGILGNAA+VAISM+AFLH+H +AYK 
Sbjct: 212 KPLPNSSKRSNTLIKMLFSTIDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKV 271

Query: 241 PSPEKDDIPFNRNLQRTSRLEGSSPNEDFRNFDVLSARG 276
              E+DDIPF+RNL+RTSRL+ SS NEDF NFDVLSARG
Sbjct: 272 APLERDDIPFDRNLRRTSRLKESSSNEDFSNFDVLSARG 310

[Close]

BLAST of CmaCh18G012950 vs. NCBI nr
Match: gi|645258222|ref|XP_008234788.1| (PREDICTED: plastid division protein PDV1 [Prunus mume])

HSP 1 Score: 305.4 bits (781), Expect = 9.7e-80
Identity = 167/276 (60.51%), Postives = 208/276 (75.36%), Query Frame = 1


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSDRPTH 60
           MKWDMEIE+IE +LEKIWDLHDK+S+AIHSI+R HFL+S   LR SD K   +       
Sbjct: 1   MKWDMEIEDIEAVLEKIWDLHDKISDAIHSISRAHFLSSVNALRSSDKKKPHANDVAVDE 60

Query: 61  NPAGPSPFVRDFRI-HVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDAAI 120
           N  G   +V+DFR  H DDS I+EA+SLNAIRTALENLEDQLEFFHTVQVQQ+ +RDAAI
Sbjct: 61  NRTG-YVYVKDFRHDHDDDSVIREAKSLNAIRTALENLEDQLEFFHTVQVQQRAERDAAI 120

Query: 121 ARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLA 180
           ARLEQSR VLAMRL+EHHGK Y+VI EALAFVGDV   + + S      PP +P+ EKL 
Sbjct: 121 ARLEQSRKVLAMRLSEHHGKKYQVIEEALAFVGDVCDASRFVSPENLYGPPISPSAEKLE 180

Query: 181 LNSSKRSNIVVKMLFSTLDIARKSLKMDNVGGILGNAALVAISMLAFLHMHHIAYKEPSP 240
               KRSNI++K+L S+++ A+KSLK+DN+GGILGNA LVA+SM+A +H++ +A +E  P
Sbjct: 181 ACEGKRSNIIIKVLISSINFAKKSLKLDNMGGILGNAGLVAVSMIALVHLNQVAMRE-HP 240

Query: 241 EKDDIPFNRNLQRTSRLEGSSPNEDFRNFDVLSARG 276
           +K  +  NRN ++TSR+EG+S    F N DVL ARG
Sbjct: 241 QK--LEENRNARKTSRVEGTSSTGRFSNLDVLLARG 272

[Close]

BLAST of CmaCh18G012950 vs. NCBI nr
Match: gi|225462701|ref|XP_002266963.1| (PREDICTED: plastid division protein PDV1 [Vitis vinifera])

HSP 1 Score: 305.4 bits (781), Expect = 9.7e-80
Identity = 167/281 (59.43%), Postives = 206/281 (73.31%), Query Frame = 1


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSDRPTH 60
           MKW+MEIEEIE ILEKIWDLHDKLS+AIHSI+R HFL S ++LRKSD      P +    
Sbjct: 1   MKWEMEIEEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKSD---KSKPLNDVDE 60

Query: 61  NPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDAAIA 120
           N  G   + +DFR+  DD AIQEA+SLNAIRTALENLEDQLEFFHTVQV QQ +RDAAIA
Sbjct: 61  NRFG-FVYAKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAERDAAIA 120

Query: 121 RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLAL 180
           RLEQSRIVLA+RL+EHHGK YKVI EA+AFVGDVR    +        PP +P  + +A 
Sbjct: 121 RLEQSRIVLAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPGKNVAP 180

Query: 181 NSSKRSNIVVKMLFSTLDIARKSLKMDNVGGILGNAALVAISMLAFLHMHHIAYKE---- 240
           +  KRSN ++K+L S  +  +KSLK+D++GGILGNAALVA+SMLA LH++ + YK+    
Sbjct: 181 HEEKRSNFLIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYKDKIVL 240

Query: 241 --PSPEKDDIPFNRNLQRTSRLEGSSPNEDFRNFDVLSARG 276
             P   +D+I  NRN++RTSR+E SS + +    DVL ARG
Sbjct: 241 EPPQKREDNIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 277

[Close]

BLAST of CmaCh18G012950 vs. NCBI nr
Match: gi|590673617|ref|XP_007038943.1| (Plastid division protein PDV1 [Theobroma cacao])

HSP 1 Score: 304.7 bits (779), Expect = 1.7e-79
Identity = 168/276 (60.87%), Postives = 206/276 (74.64%), Query Frame = 1


Query: 1   MKWDMEIEEIEVILEKIWDLHDKLSEAIHSITRDHFLTSTQNLRKSDTKDSKSPSDRPTH 60
           MKWDMEIEEIE +LEKIWDLHDKLS+AIHSI+R HFL S + LRKSD K  K  +D    
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSIKALRKSDKK--KLYNDAVGD 60

Query: 61  NPAGPSPFVRDFRIHVDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVDRDAAIA 120
           +      FV+DFRI   +SAIQEA+SLNAIRTALENLEDQLE FHTV  QQQ +RDAAIA
Sbjct: 61  DNRAGFVFVKDFRIDDSESAIQEAKSLNAIRTALENLEDQLEIFHTVHTQQQAERDAAIA 120

Query: 121 RLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYPANYASHGKQDAPPFTPNCEKLAL 180
           RLEQSRI+LA+RLAEHHGK YKVI EALAFVGDV   +++ S     + P +P+ E LA 
Sbjct: 121 RLEQSRIILALRLAEHHGKKYKVIDEALAFVGDVHDASHFVSPENLYSTPVSPSGENLAS 180

Query: 181 NSSKRSNIVVKMLFSTLDIARKSLKMDNVGGILGNAALVAISMLAFLHMHHIAYKEPS-P 240
           +  KRSNI++K+L S+L+ A+KSLK D++GGIL NAAL A+SM+A LH+H IAY E S  
Sbjct: 181 HEGKRSNILIKVLVSSLNFAKKSLKFDHMGGILSNAALFAVSMIAMLHLHQIAYTEHSEK 240

Query: 241 EKDDIPFNRNLQRTSRLEGSSPNEDFRNFDVLSARG 276
           ++DDI   R +++ S+L G S  +   + DV SARG
Sbjct: 241 QEDDINRRRTVRKNSQLGGPSSYDCLNHLDVFSARG 274

The following BLAST results are available for this feature:

BLAST of CmaCh18G012950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PDV1_ARATH	2.5e-59	47.99	Plastid division protein PDV1 OS=Arabidopsis thaliana GN=PDV1 PE=1 SV=1	[more]

BLAST of CmaCh18G012950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCS6_CUCSA	1.1e-109	75.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357100 PE=4 SV=1	[more]
A0A061G8R9_THECC	1.2e-79	60.87	Plastid division protein PDV1 OS=Theobroma cacao GN=TCM_015337 PE=4 SV=1	[more]
E0CUK8_VITVI	3.1e-77	59.21	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02390 PE=4 SV=...	[more]
A0A0D2TDP8_GOSRA	1.7e-75	56.73	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G271100 PE=4 SV=1	[more]
A0A067JRN3_JATCU	5.0e-75	58.82	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26010 PE=4 SV=1	[more]

BLAST of CmaCh18G012950 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53280.1	1.4e-60	47.99	plastid division1	[more]
AT2G16070.2	1.2e-06	31.13	plastid division2	[more]

BLAST of CmaCh18G012950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463466\|ref\|XP_004149455.1\|	1.5e-109	75.54	PREDICTED: plastid division protein PDV1 [Cucumis sativus]	[more]
gi\|659077677\|ref\|XP_008439328.1\|	4.5e-109	75.63	PREDICTED: plastid division protein PDV1 [Cucumis melo]	[more]
gi\|645258222\|ref\|XP_008234788.1\|	9.7e-80	60.51	PREDICTED: plastid division protein PDV1 [Prunus mume]	[more]
gi\|225462701\|ref\|XP_002266963.1\|	9.7e-80	59.43	PREDICTED: plastid division protein PDV1 [Vitis vinifera]	[more]
gi\|590673617\|ref\|XP_007038943.1\|	1.7e-79	60.87	Plastid division protein PDV1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010020	chloroplast fission
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G012950.1	CmaCh18G012950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33600	FAMILY NOT NAMED	coord: 6..260 score: 1.4E
None	No IPR available	PANTHER	PTHR33600:SF4	PLASTID DIVISION PROTEIN PDV1	coord: 6..260 score: 1.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G012950	Cucsa.012860	Cucumber (Gy14) v1	cgycmaB0550
CmaCh18G012950	Cla004224	Watermelon (97103) v1	cmawmB373
CmaCh18G012950	Csa3G357100	Cucumber (Chinese Long) v2	cmacuB410
CmaCh18G012950	MELO3C006974	Melon (DHL92) v3.5.1	cmameB375
CmaCh18G012950	ClCG05G008660	Watermelon (Charleston Gray)	cmawcgB365
CmaCh18G012950	CSPI03G22120	Wild cucumber (PI 183967)	cmacpiB415
CmaCh18G012950	CmoCh18G013240	Cucurbita moschata (Rifu)	cmacmoB406
CmaCh18G012950	CmoCh16G000800	Cucurbita moschata (Rifu)	cmacmoB405
CmaCh18G012950	Lsi05G000700	Bottle gourd (USVL1VR-Ls)	cmalsiB385
CmaCh18G012950	Cp4.1LG09g00410	Cucurbita pepo (Zucchini)	cmacpeB415
CmaCh18G012950	Cp4.1LG14g06610	Cucurbita pepo (Zucchini)	cmacpeB425
CmaCh18G012950	MELO3C006974.2	Melon (DHL92) v3.6.1	cmamedB432
CmaCh18G012950	CsaV3_3G021850	Cucumber (Chinese Long) v3	cmacucB0488
CmaCh18G012950	Cla97C05G090820	Watermelon (97103) v2	cmawmbB424
CmaCh18G012950	Bhi01G001063	Wax gourd	cmawgoB0505
CmaCh18G012950	CsGy3G021190	Cucumber (Gy14) v2	cgybcmaB353
CmaCh18G012950	Carg15087	Silver-seed gourd	carcmaB1368
CmaCh18G012950	Carg20359	Silver-seed gourd	carcmaB0754

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh18G012950	CmaCh16G000770	Cucurbita maxima (Rimu)	cmacmaB338

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G012950	Cucumber (Chinese Long) v3	cmacucB0490
CmaCh18G012950	Cucumber (Chinese Long) v3	cmacucB0500
CmaCh18G012950	Cucumber (Chinese Long) v3	cmacucB0504
CmaCh18G012950	Watermelon (97103) v2	cmawmbB400
CmaCh18G012950	Watermelon (97103) v2	cmawmbB429
CmaCh18G012950	Wax gourd	cmawgoB0500
CmaCh18G012950	Cucurbita maxima (Rimu)	cmacmaB253
CmaCh18G012950	Cucurbita maxima (Rimu)	cmacmaB306
CmaCh18G012950	Cucurbita maxima (Rimu)	cmacmaB396
CmaCh18G012950	Cucumber (Gy14) v1	cgycmaB0601
CmaCh18G012950	Cucurbita moschata (Rifu)	cmacmoB403
CmaCh18G012950	Cucurbita moschata (Rifu)	cmacmoB416
CmaCh18G012950	Wild cucumber (PI 183967)	cmacpiB425
CmaCh18G012950	Cucumber (Chinese Long) v2	cmacuB419
CmaCh18G012950	Melon (DHL92) v3.5.1	cmameB349
CmaCh18G012950	Watermelon (Charleston Gray)	cmawcgB347
CmaCh18G012950	Watermelon (97103) v1	cmawmB388
CmaCh18G012950	Cucurbita pepo (Zucchini)	cmacpeB423
CmaCh18G012950	Cucurbita pepo (Zucchini)	cmacpeB453
CmaCh18G012950	Bottle gourd (USVL1VR-Ls)	cmalsiB363
CmaCh18G012950	Bottle gourd (USVL1VR-Ls)	cmalsiB386
CmaCh18G012950	Cucumber (Gy14) v2	cgybcmaB355
CmaCh18G012950	Cucumber (Gy14) v2	cgybcmaB628
CmaCh18G012950	Melon (DHL92) v3.6.1	cmamedB403
CmaCh18G012950	Melon (DHL92) v3.6.1	cmamedB435
CmaCh18G012950	Silver-seed gourd	carcmaB0714