CsaV3_3G021850 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGGGTTTTAATTGTTGTGATTGAAATTTTACTATTTATCTAGTCGGCCCTTTTGTTGCATTGGGTAAAGATCCCAAATTTGAAAGTGAGAGGGAATACGGGCCGGAAGTTTTATGTGGCCCAAAACAATTTTCAGATACCTTCCCCAATCTCTACTCATTCTTTCCTCCTCTTCTTCTTCTTCCCTCTGTTTCCCTCCATGAAATGGGACATGGAGATCGAGGAAATCGAGGCCGTCCTCGAGAAGATTTGGGATCTTCACGACAAGCTCAGTGAAGCTATTCACTCAATTTCCCGAGATCACTTCCTCGCCTCCACCAAACATCTCAGGAAATCTGACAACAACAACAACAACAACAAGGATTCCAACAACACCCCCATTCCCTTACCCCACACTGCTCTCTTCCCTTTCATCCACGAATTCCGGGTTGACCTTGATGATTCTGCCATCCAGGAAGCCAGAAGTCTTAATGCCATTCGAACTGCTCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATGTATCTTCCTTTTTCTTCCCTGTTTCCTTTTCCTTCTTTTAATTCTCTCGTTTCTTTAGTTTTTCAGTCGGTAGAGACAACAGGACAAGTTTTGTTTTCTATATGATTGGGGATTTCCATTATTGCCCAAACAAACAGATTATGTACTCATAGCTCTATGTTTGCGATTCAATTACGTGATTTTTCTTCATTTTCAGTAGGGATAGATTCGGCAGTATACGAATTTCTTTGTTGTCTGCTGTCTGGAAGACTGAAGGGAAGAGTTCCTTCTAGGTTCACTATTCTTTGCCTTCCTTGATTTTTCTTCATTTGTGCTGTCTATGTCCATTTTTCCTGAAGATTGGACGGGGTTGCTAATTTCTTAACGTTGACTGTTTACTTTGGTTTCTGTTTATTGGATGCTTGTGTAGATTATGATTTTAGGTAGTCGTACGGCAGTTTCCTTTTCATTTTTTGAAATTAAGATTTCAAGCTTAGTAGAATTAGGGATAACAACTGTATGTCCATCATAGAATTTTCTACTTTGATGTTTGAATAAATGAAAGTATGTAATCACACAAAACGGCTCCGTAATTCTATTGAAAAAGATGAACAGATTCCTATCAAATTGTGAAAGAACCATTTTTGGTCCAATCATAGTGCCATTGGGGCGCCACTAAAGAGTAGTAGTACTTGGTGTATCCCAAGATGCACCCATCTCACACACGCGCAAGAATTAAAATCGTGGAAATTTTCTCCTTTTAGTCCGTCCTGAATGGTTTCCATTTAACCAAGTTCTTTTCTTTTCTCGAAGAATAAACTATAATTTAGAACAATGGAAGCTTTCGTTCCTATAGAAATCATGACTCTTATATTATTTAACTACACGAGTCATTCAGTGACTAGTTAAGAATAAATAGCAGCAAATTGTTTTGAATAGAGGCTCCTAAGCAATGGAAGCTCGGTTTATTGGTTTGCTCTTGATTTTTTATTTCATTTTGCTCAACTAAAGCTCAGTGTCTTACCAGAGAACTTGCAACTTCATGTTCTGCATTTAAATGAAAGCAGTAGTGTGCTGCATTCTTATGTTCCTTCTCACTTATAGGGTTATGTTGTTAACTATTTCATTGAAGTGAATATTGACTGGACAATTGACTCACCGGATTCTTTCTTTTTATTTTCAGACCGTTCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTCTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCTTTAGCGTTTGTTGGAGATGTACGTTATGCAGCTAACTATGTTTCACAAGAAAACAAAGATGGTCCAAAGTTTAGCCCGAATGGTCAGAAGCCATTGCCGAACAGTTCAAAGAGGTCTAATACTCTGATCAAGATGCTATTTTCAACCCTCGACTTTGCTAGGAAATCTCTCAAAATGGATCATGTGGGCGGGATACTTGGCAATGCTGCCATGGTTGCAATTAGCATGGTTGCATTTCTGCATCTCCACCAGGTAGCATATAAGGCGGCACCACTGGAGAGAGACGATATTCCTTTCAACAGAAACCTTCGAAGAACTTCTCGGCTCAAGGAATCTTCGTCAAATGAAGATTTCAGCAACTTTGACGTCTTATCCGCCAGGGGTTAGTGTGAATATATAAAAATTTTCAAGCTTTGATGCATCTCTTATCAGTTGATTTAAATATGAGCTGGCTGTTTGATAATGTCTGTTGTATGAAAATGATTTGATTTAATAGTTAGAAATTTTCTTCATCATTCTTGAGGTTGTAATTGTCTATTGAATTGAGAGCTTTAAATCTTGAGTCCACTGAGTTGTTCAACAAACAAAAACAATTATGATTGGAATACCAAAACTTCTAGCTTGCCTCAAGTTATGAAGCAAGGATATGCCTGTTGGGCCTGATTTGAACCCTCTCCCCATTTGGGCTTGAACATGAAAGACCCAATTCCTAAATCTATATTTATTAGATGGGGGTCGATTAAGGACGGTAAGAACATAGAGAATCTACAAGAATTGTCCCAAAGAGATGATGAAGTGATCAACAAACTGACTGTTCATCCAGGAAACCAAATGTTCTTTGGCCTTGACCACACATATCTGAGCGAGAAAAATTGTTTGAACTATAATTATATGCCGTCTAGGTTGCACTTATCTCCCTGCATCCTTAACTTGTAGAAAAGAAAAGAAAATTTTGCTACATGGCAATTTGTGATGCGTTACTAAGTAGATTGGCACAGATTTTTGCAACTAAAGATGCACCTAAAAGTTATTGAAGGTAGACCATAGGAGGGAAGAAATGACAAATTAGAAAGTCATAAATGAAAAGATATGTCGGTGAAGTGTTTGATATTGATTTGGTTATGTGAGGGCTCTCTCACGGCCTCTAAATCTGGATGGAAGAATAGGGGGTTTGAACGCCTGATTTGTAGTTGTGCTTTGTTAGCCTTTCTTTGACTTGTTTAATTTGAAAGGTTGCATGCATCACTCCTTAATCTCTCTATTGTCTTTCCATGAATCACTCCCAAATTCCTCTTTTAATGCAACCAGACATTCCTTTCTGTCCACGTCAAAAATCTCTTTTTATAGAGAGAGACATCCATTTATGCCAGATATGTGTACCAAATTCCTACTATGTATGTGTTTTTGTTTTTGTTTTTCTTCTTTTCTTCTTTTCTTGGCATACTTGTGGTTGTAGTTTGAAATTTTCATTCTGAAAATTGTCATCAAATCGCTAATGCTGATTTTTG ATGAAATGGGACATGGAGATCGAGGAAATCGAGGCCGTCCTCGAGAAGATTTGGGATCTTCACGACAAGCTCAGTGAAGCTATTCACTCAATTTCCCGAGATCACTTCCTCGCCTCCACCAAACATCTCAGGAAATCTGACAACAACAACAACAACAACAAGGATTCCAACAACACCCCCATTCCCTTACCCCACACTGCTCTCTTCCCTTTCATCCACGAATTCCGGGTTGACCTTGATGATTCTGCCATCCAGGAAGCCAGAAGTCTTAATGCCATTCGAACTGCTCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATACCGTTCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTCTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCTTTAGCGTTTGTTGGAGATGTACGTTATGCAGCTAACTATGTTTCACAAGAAAACAAAGATGGTCCAAAGTTTAGCCCGAATGGTCAGAAGCCATTGCCGAACAGTTCAAAGAGGTCTAATACTCTGATCAAGATGCTATTTTCAACCCTCGACTTTGCTAGGAAATCTCTCAAAATGGATCATGTGGGCGGGATACTTGGCAATGCTGCCATGGTTGCAATTAGCATGGTTGCATTTCTGCATCTCCACCAGGTAGCATATAAGGCGGCACCACTGGAGAGAGACGATATTCCTTTCAACAGAAACCTTCGAAGAACTTCTCGGCTCAAGGAATCTTCGTCAAATGAAGATTTCAGCAACTTTGACGTCTTATCCGCCAGGGGTTAG ATGAAATGGGACATGGAGATCGAGGAAATCGAGGCCGTCCTCGAGAAGATTTGGGATCTTCACGACAAGCTCAGTGAAGCTATTCACTCAATTTCCCGAGATCACTTCCTCGCCTCCACCAAACATCTCAGGAAATCTGACAACAACAACAACAACAACAAGGATTCCAACAACACCCCCATTCCCTTACCCCACACTGCTCTCTTCCCTTTCATCCACGAATTCCGGGTTGACCTTGATGATTCTGCCATCCAGGAAGCCAGAAGTCTTAATGCCATTCGAACTGCTCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATACCGTTCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTCTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCTTTAGCGTTTGTTGGAGATGTACGTTATGCAGCTAACTATGTTTCACAAGAAAACAAAGATGGTCCAAAGTTTAGCCCGAATGGTCAGAAGCCATTGCCGAACAGTTCAAAGAGGTCTAATACTCTGATCAAGATGCTATTTTCAACCCTCGACTTTGCTAGGAAATCTCTCAAAATGGATCATGTGGGCGGGATACTTGGCAATGCTGCCATGGTTGCAATTAGCATGGTTGCATTTCTGCATCTCCACCAGGTAGCATATAAGGCGGCACCACTGGAGAGAGACGATATTCCTTTCAACAGAAACCTTCGAAGAACTTCTCGGCTCAAGGAATCTTCGTCAAATGAAGATTTCAGCAACTTTGACGTCTTATCCGCCAGGGGTTAG MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNKDSNNTPIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQKPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAAPLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG
BLAST of CsaV3_3G021850 vs. NCBI nr
Match: XP_004149455.1 (PREDICTED: plastid division protein PDV1 [Cucumis sativus] >KGN57871.1 hypothetical protein Csa_3G357100 [Cucumis sativus]) HSP 1 Score: 505.4 bits (1300), Expect = 1.3e-139 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of CsaV3_3G021850 vs. NCBI nr
Match: XP_008439328.2 (PREDICTED: plastid division protein PDV1 [Cucumis melo]) HSP 1 Score: 483.0 bits (1242), Expect = 6.7e-133 Identity = 267/279 (95.70%), Postives = 271/279 (97.13%), Query Frame = 0
BLAST of CsaV3_3G021850 vs. NCBI nr
Match: XP_022140820.1 (plastid division protein PDV1 isoform X2 [Momordica charantia]) HSP 1 Score: 421.8 bits (1083), Expect = 1.8e-114 Identity = 222/278 (79.86%), Postives = 241/278 (86.69%), Query Frame = 0
BLAST of CsaV3_3G021850 vs. NCBI nr
Match: XP_022140819.1 (plastid division protein PDV1 isoform X1 [Momordica charantia]) HSP 1 Score: 417.2 bits (1071), Expect = 4.5e-113 Identity = 222/279 (79.57%), Postives = 241/279 (86.38%), Query Frame = 0
BLAST of CsaV3_3G021850 vs. NCBI nr
Match: XP_022922902.1 (plastid division protein PDV1 [Cucurbita moschata]) HSP 1 Score: 403.7 bits (1036), Expect = 5.2e-109 Identity = 221/279 (79.21%), Postives = 234/279 (83.87%), Query Frame = 0
BLAST of CsaV3_3G021850 vs. TAIR10
Match: AT5G53280.1 (plastid division1) HSP 1 Score: 251.5 bits (641), Expect = 6.0e-67 Identity = 146/276 (52.90%), Postives = 186/276 (67.39%), Query Frame = 0
BLAST of CsaV3_3G021850 vs. TAIR10
Match: AT2G16070.2 (plastid division2) HSP 1 Score: 52.4 bits (124), Expect = 5.3e-07 Identity = 29/79 (36.71%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of CsaV3_3G021850 vs. Swiss-Prot
Match: sp|Q9FK13|PDV1_ARATH (Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.1e-65 Identity = 146/276 (52.90%), Postives = 186/276 (67.39%), Query Frame = 0
BLAST of CsaV3_3G021850 vs. Swiss-Prot
Match: sp|Q9XII1|PDV2_ARATH (Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 9.6e-06 Identity = 29/79 (36.71%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of CsaV3_3G021850 vs. TrEMBL
Match: tr|A0A0A0LCS6|A0A0A0LCS6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G357100 PE=4 SV=1) HSP 1 Score: 505.4 bits (1300), Expect = 8.4e-140 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of CsaV3_3G021850 vs. TrEMBL
Match: tr|A0A1S3AYK3|A0A1S3AYK3_CUCME (plastid division protein PDV1 OS=Cucumis melo OX=3656 GN=LOC103484150 PE=4 SV=1) HSP 1 Score: 483.0 bits (1242), Expect = 4.4e-133 Identity = 267/279 (95.70%), Postives = 271/279 (97.13%), Query Frame = 0
BLAST of CsaV3_3G021850 vs. TrEMBL
Match: tr|A0A2P4MDN2|A0A2P4MDN2_QUESU (Plastid division protein pdv1 OS=Quercus suber OX=58331 GN=CFP56_35315 PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 7.0e-86 Identity = 194/287 (67.60%), Postives = 228/287 (79.44%), Query Frame = 0
BLAST of CsaV3_3G021850 vs. TrEMBL
Match: tr|A0A2N9EMK2|A0A2N9EMK2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3944 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 9.1e-86 Identity = 179/279 (64.16%), Postives = 209/279 (74.91%), Query Frame = 0
BLAST of CsaV3_3G021850 vs. TrEMBL
Match: tr|A0A2C9UHN7|A0A2C9UHN7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G018900 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 1.0e-81 Identity = 171/278 (61.51%), Postives = 207/278 (74.46%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|