CSPI03G22120 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G22120
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Plastid division protein PDV1
Location	Chr3 : 18519552 .. 18521911 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATTCTTTCCTCCTCTTCTTCTTCTTCCCTCTGTTTCCCTCCATGAAATGGGACATGGAGATCGAGGAAATCGAGGCCGTCCTCGAGAAGATTTGGGATCTTCACGACAAGCTCAGTGAAGCTATTCACTCAATTTCCCGAGATCACTTCCTCGCCTCCACCAAACATCTCAGGAAATCTGACAACAACAACAACAACAACAACAAGGATTCCAACAACACCCCCATTCCCTTACCCCACACTGCTCTCTTCCCTTTCATCCACGAATTCCGGGTTGACCTTGATGATTCTGCCATCCAGGAAGCCAGAAGTCTTAATGCCATTCGAACTGCTCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATGTATCTTCCTTTTTCTTCCCTATTTCCTTTTCCTTCTTTTAATTCTCTCGTTTCTTTAGTTTTTCAGTCGGTAGAGACAACAGGACAAGTTTTGTTTTCGATATTATTTGGGATTTCCATTATTGCCCAAACAAACAGATTATGTACTCATAGCTCTATGTTTGCGATTCAATTACGTGATTTTTCTTCATTTTCAGTAGGGATAGATTCGGCAGTGTACGAATTTCTTTGTTGTCTGCTGTCTGGAAGACTGAAGGGAAGAGTTCCTTCTAGGTTCACTATTCTTTGCCTTCCTTGATTTTTCTTCATTTGTGCTGTCTATGTCCATTTTTCCTGAAGATTGGACGGGGTTGCTAATTTCTTAACGTTGACTGTTTACTTTGGTTTCTGATTATTGGATGCTTGTGTAGATTATGATTTTAGGTAGTCGTACGGCAGTTTCCTTTTCATTTTTTGAAATTAAGATTTCAAGCTTAGTAGAATTAGGGATAACAACTGTATGTCCATCATAGAATTTTCTACTTTGATGTTTGAATAAATGAAAGTATGTAATCACACAAAACGGCTCCGTAATTCTATTGAAAAAGATGAACAGATTCCTATCAAATTGTGAAAGAACCATTTTTGGTCCAATCATAGTGCCATTGGGGCGCCACTAAAGAGTAGTAGTACTTGGTGTATCCCAAGATGCACCCATCTCACACACGCGCAAGAATTAAAATCGTGGAAATTTTCTCCTTTTAGTCCGTCCTGAATGGTTTCCATTTAACCAAGTTCTTTTCTTTTTTCGAAGAATAAACTATAATTTAGAACAATGGAAGCTTTCGTTCCTATAGAAATCATGACTCTTATATTATTTAACGCCACGAGTCATTCAGTGACTAGTTAAGAATAAATAGCAGCAAATTGTTTTGAATAGAGGCTCCTAAGCAATGGAAGCTCGGTTTATTGGTTTGCTCTTGATTTTTTATTTCATTTTGCTCAACTAAAGCTCAGTTTCTTACCAGAGAACTTGCAACTTCATGTTCTGCATTTAAATGAAAGCAGTAGTGTGCTGCATTCTTATGTTCCTTCTCACTTATAGGGTTATGTTGTTAACTATTTCATTGAAGTGAATATTGACTGGACAATTGACTCACTGGATTCTTTCTTTTTTATTTTCAGACCGTTCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTCTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCTTTAGCGTTTGTTGGAGATGTACGTTATGCAGCTAACTATGTTTCACAAGAAAACAAAGATGGTCCAAAGTTTAGCCCGAATGGTCAGAAGCCATTGCCGAACAGTTCAAAGAGGTCTAATACTCTGATCAAGATGCTATTTTCAACCCTCGACTTTGCTAGGAAATCTCTCAAAATGGATCATGTGGGCGGGATACTTGGCAATGCTGCCATGGTTGCAATTAGCATGGTTGCATTTCTGCATCTCCACCAGGTAGCATATAAGGCGGCACCACTGGAGAGAGACGATATTCCTTTCAACAGAAACCTTCGAAGAACTTCTCGGCTCAAGGAATCTTCGTCAAATGAAGATTTCAGCAACTTTGATGTCTTATCCGCCAGGGGTTAGTGTGAATATATAAAAATTTTCAAGCTTTGATGCATCTCTTATCAGTTGATTTAAATATGAGCTGGCTGTTTGATAATGTCTGTTGTATGAAAATGATTTGATTTAATAGTTAGAAATTTTCTTCATCATTCTTGAGGTTGTAATTGTCTATTGAATTGAGAGCTTTAAATCTTGAGTCCACTGAGTTGTTCAACAAACAAAAACAATTATGATTGGAATACCAAAACTTCTAGCTTGCCTCAAGTTATGAAGCAAGGATATGCCTGTTGGGCCTGATTTGAACCCTCTCCCCATTTGGGCTTGAACATGGAA

mRNA sequence

ATGAAATGGGACATGGAGATCGAGGAAATCGAGGCCGTCCTCGAGAAGATTTGGGATCTTCACGACAAGCTCAGTGAAGCTATTCACTCAATTTCCCGAGATCACTTCCTCGCCTCCACCAAACATCTCAGGAAATCTGACAACAACAACAACAACAACAACAAGGATTCCAACAACACCCCCATTCCCTTACCCCACACTGCTCTCTTCCCTTTCATCCACGAATTCCGGGTTGACCTTGATGATTCTGCCATCCAGGAAGCCAGAAGTCTTAATGCCATTCGAACTGCTCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATACCGTTCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTCTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCTTTAGCGTTTGTTGGAGATGTACGTTATGCAGCTAACTATGTTTCACAAGAAAACAAAGATGGTCCAAAGTTTAGCCCGAATGGTCAGAAGCCATTGCCGAACAGTTCAAAGAGGTCTAATACTCTGATCAAGATGCTATTTTCAACCCTCGACTTTGCTAGGAAATCTCTCAAAATGGATCATGTGGGCGGGATACTTGGCAATGCTGCCATGGTTGCAATTAGCATGGTTGCATTTCTGCATCTCCACCAGGTAGCATATAAGGCGGCACCACTGGAGAGAGACGATATTCCTTTCAACAGAAACCTTCGAAGAACTTCTCGGCTCAAGGAATCTTCGTCAAATGAAGATTTCAGCAACTTTGATGTCTTATCCGCCAGGGGTTAG

Coding sequence (CDS)

ATGAAATGGGACATGGAGATCGAGGAAATCGAGGCCGTCCTCGAGAAGATTTGGGATCTTCACGACAAGCTCAGTGAAGCTATTCACTCAATTTCCCGAGATCACTTCCTCGCCTCCACCAAACATCTCAGGAAATCTGACAACAACAACAACAACAACAACAAGGATTCCAACAACACCCCCATTCCCTTACCCCACACTGCTCTCTTCCCTTTCATCCACGAATTCCGGGTTGACCTTGATGATTCTGCCATCCAGGAAGCCAGAAGTCTTAATGCCATTCGAACTGCTCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATACCGTTCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTCTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCTTTAGCGTTTGTTGGAGATGTACGTTATGCAGCTAACTATGTTTCACAAGAAAACAAAGATGGTCCAAAGTTTAGCCCGAATGGTCAGAAGCCATTGCCGAACAGTTCAAAGAGGTCTAATACTCTGATCAAGATGCTATTTTCAACCCTCGACTTTGCTAGGAAATCTCTCAAAATGGATCATGTGGGCGGGATACTTGGCAATGCTGCCATGGTTGCAATTAGCATGGTTGCATTTCTGCATCTCCACCAGGTAGCATATAAGGCGGCACCACTGGAGAGAGACGATATTCCTTTCAACAGAAACCTTCGAAGAACTTCTCGGCTCAAGGAATCTTCGTCAAATGAAGATTTCAGCAACTTTGATGTCTTATCCGCCAGGGGTTAG

Homology

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BLAST of CSPI03G22120 vs. Swiss-Prot
Match: PDV1_ARATH (Plastid division protein PDV1 OS=Arabidopsis thaliana GN=PDV1 PE=1 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.2e-66
Identity = 148/278 (53.24%), Postives = 191/278 (68.71%), Query Frame = 1


Query: 4   DMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNN-NNNKDSNNTPI 63
           +MEIEEIEAVLEKIWDLHDKLS+ IH IS+ HFL S K   +S+   N + N   +  P 
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKRKNPHGNSGEDKRPG 62

Query: 64  PLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAA 123
                  + FI  F VD +DS IQEA+SLNAIRTALENLEDQLEFFHT+  QQ+ E+D A
Sbjct: 63  -------YVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVA 122

Query: 124 IARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQKP 183
           IARLEQSRILLAMRLAEHHGKNY V+ EALAFVG ++  ++YVS ++      +P+G   
Sbjct: 123 IARLEQSRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGANS 182

Query: 184 LPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAAP 243
           +P+  + SN +I    ST  FA+++L  +HV G+LGNAA+ AIS+VA LHLHQVA     
Sbjct: 183 IPDGIE-SNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHH 242

Query: 244 LERDDIPFNRN-LRRTSRLKESSSNEDFSNFDVLSARG 280
           L++ +  F R+  R+T    +SS++    + DV+ ARG
Sbjct: 243 LQKKEDRFYRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

[Close]

BLAST of CSPI03G22120 vs. TrEMBL
Match: A0A0A0LCS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357100 PE=4 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 7.0e-149
Identity = 278/279 (99.64%), Postives = 278/279 (99.64%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNT 60
           MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNN NNNNKDSNNT
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNN-NNNNKDSNNT 60

Query: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120
           PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD
Sbjct: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120

Query: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180
           AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ
Sbjct: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180

Query: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA 240
           KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA
Sbjct: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA 240

Query: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
           APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG
Sbjct: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 278

[Close]

BLAST of CSPI03G22120 vs. TrEMBL
Match: A0A061G8R9_THECC (Plastid division protein PDV1 OS=Theobroma cacao GN=TCM_015337 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 4.3e-82
Identity = 175/280 (62.50%), Postives = 211/280 (75.36%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNT 60
           MKWDMEIEEIEAVLEKIWDLHDKLS+AIHSISR HFL S K LRKSD     N+   ++ 
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSIKALRKSDKKKLYNDAVGDD- 60

Query: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120
                + A F F+ +FR+D  +SAIQEA+SLNAIRTALENLEDQLE FHTV  QQQ ERD
Sbjct: 61  -----NRAGFVFVKDFRIDDSESAIQEAKSLNAIRTALENLEDQLEIFHTVHTQQQAERD 120

Query: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180
           AAIARLEQSRI+LA+RLAEHHGK YKVI EALAFVGDV  A+++VS EN      SP+G+
Sbjct: 121 AAIARLEQSRIILALRLAEHHGKKYKVIDEALAFVGDVHDASHFVSPENLYSTPVSPSGE 180

Query: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAY-K 240
               +  KRSN LIK+L S+L+FA+KSLK DH+GGIL NAA+ A+SM+A LHLHQ+AY +
Sbjct: 181 NLASHEGKRSNILIKVLVSSLNFAKKSLKFDHMGGILSNAALFAVSMIAMLHLHQIAYTE 240

Query: 241 AAPLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
            +  + DDI   R +R+ S+L   SS +  ++ DV SARG
Sbjct: 241 HSEKQEDDINRRRTVRKNSQLGGPSSYDCLNHLDVFSARG 274

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BLAST of CSPI03G22120 vs. TrEMBL
Match: E0CUK8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02390 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.3e-81
Identity = 177/281 (62.99%), Postives = 211/281 (75.09%), Query Frame = 1


Query: 5   MEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNTPIPL 64
           MEIEEIEA+LEKIWDLHDKLS+AIHSISR HFL S K LRKSD +   N+ D N      
Sbjct: 1   MEIEEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKSDKSKPLNDVDENRFG--- 60

Query: 65  PHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIA 124
                F +  +FRV+ DD AIQEA+SLNAIRTALENLEDQLEFFHTVQV QQ ERDAAIA
Sbjct: 61  -----FVYAKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAERDAAIA 120

Query: 125 RLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQKPLP 184
           RLEQSRI+LA+RL+EHHGK YKVI EA+AFVGDVR A  +V  +N  GP  SP G+   P
Sbjct: 121 RLEQSRIVLAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPGKNVAP 180

Query: 185 NSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYK----- 244
           +  KRSN LIK+L S  +F +KSLK+DH+GGILGNAA+VA+SM+A LHL+QV YK     
Sbjct: 181 HEEKRSNFLIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYKDKIVL 240

Query: 245 AAPLERDD-IPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
             P +R+D I  NRN++RTSR++ SS + + +  DVL ARG
Sbjct: 241 EPPQKREDNIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 273

[Close]

BLAST of CSPI03G22120 vs. TrEMBL
Match: B9I535_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s01330g PE=4 SV=2)

HSP 1 Score: 308.1 bits (788), Expect = 1.1e-80
Identity = 175/292 (59.93%), Postives = 213/292 (72.95%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLR-------KSDNNNNN- 60
           MKWDME+EEIEAVLEKIWDLHDKLS+AIHSISR HFL S K L+       K  NN N+ 
Sbjct: 1   MKWDMELEEIEAVLEKIWDLHDKLSDAIHSISRSHFLHSIKSLKTNTTTTNKKLNNENDV 60

Query: 61  ----NNKDSNNTPIPLPHTALFPFIHEFRVDLDD-SAIQEARSLNAIRTALENLEDQLEF 120
               NN +SNN        + F F  +FRVD +D S IQEA+SLN+IRTALENLEDQLEF
Sbjct: 61  GFEDNNSNSNN------RASGFVFFKDFRVDGNDLSTIQEAKSLNSIRTALENLEDQLEF 120

Query: 121 FHTVQVQQQVERDAAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQ 180
           FHTVQ+ Q+ E DAAIARLEQSRI+LAMRLAEHHGK YKVI EALAFVGDV  A+ +VS 
Sbjct: 121 FHTVQIHQRAEIDAAIARLEQSRIILAMRLAEHHGKKYKVIEEALAFVGDVHDASQFVSP 180

Query: 181 ENKDGPKFSPNGQKPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISM 240
           EN  G   SP G+  +    KR NT+IK+L S+ +FA+KSLK+DHVGG+LGNAA+  +SM
Sbjct: 181 ENLYGSPTSPLGENLIRREGKRPNTVIKVLLSSFEFAKKSLKLDHVGGLLGNAALFTVSM 240

Query: 241 VAFLHLHQVAYKAAPLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
           +A LHLHQVA+   P +++D+  +RN ++   L+ SSSN    + DV+ ARG
Sbjct: 241 IAMLHLHQVAHNHHPYKQEDLYSDRNGKKAFGLEGSSSNGSLDHLDVMLARG 286

[Close]

BLAST of CSPI03G22120 vs. TrEMBL
Match: A9PED9_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 3.1e-80
Identity = 174/292 (59.59%), Postives = 213/292 (72.95%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLR-------KSDNNNNN- 60
           MKWDME+EEIEAVLEKIWDLHDKLS+AIHSISR HFL S K L+       K  NN N+ 
Sbjct: 1   MKWDMELEEIEAVLEKIWDLHDKLSDAIHSISRSHFLHSIKSLKTNTTTTNKKLNNENDV 60

Query: 61  ----NNKDSNNTPIPLPHTALFPFIHEFRVDLDD-SAIQEARSLNAIRTALENLEDQLEF 120
               NN +SNN        + F F  +FRVD +D S IQEA+SLN+IRTALENLEDQLEF
Sbjct: 61  GFEDNNSNSNN------RASGFVFFKDFRVDGNDLSTIQEAKSLNSIRTALENLEDQLEF 120

Query: 121 FHTVQVQQQVERDAAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQ 180
           FHTVQ+ Q+ E DAAIARLEQSRI+LAMRLAEHHGK YKVI EALAFVGDV  A+++VS 
Sbjct: 121 FHTVQIHQRAEIDAAIARLEQSRIILAMRLAEHHGKKYKVIEEALAFVGDVHDASHFVSP 180

Query: 181 ENKDGPKFSPNGQKPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISM 240
           EN  G   SP G+  +    KR NT+I +L S+ +FA+KSLK+DHVGG+LGNAA+  +SM
Sbjct: 181 ENLYGSPTSPLGENLIRREGKRPNTVINVLLSSFEFAKKSLKLDHVGGLLGNAALFTVSM 240

Query: 241 VAFLHLHQVAYKAAPLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
           +A LHLHQVA+   P +++D+  +RN ++   L+ SSSN    + DV+ ARG
Sbjct: 241 IAMLHLHQVAHNHHPYKQEDLYSDRNGKKAFGLEGSSSNGSLDHLDVMLARG 286

[Close]

BLAST of CSPI03G22120 vs. TAIR10
Match: AT5G53280.1 (AT5G53280.1 plastid division1)

HSP 1 Score: 252.3 bits (643), Expect = 3.5e-67
Identity = 148/278 (53.24%), Postives = 191/278 (68.71%), Query Frame = 1


Query: 4   DMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNN-NNNKDSNNTPI 63
           +MEIEEIEAVLEKIWDLHDKLS+ IH IS+ HFL S K   +S+   N + N   +  P 
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKRKNPHGNSGEDKRPG 62

Query: 64  PLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAA 123
                  + FI  F VD +DS IQEA+SLNAIRTALENLEDQLEFFHT+  QQ+ E+D A
Sbjct: 63  -------YVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVA 122

Query: 124 IARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQKP 183
           IARLEQSRILLAMRLAEHHGKNY V+ EALAFVG ++  ++YVS ++      +P+G   
Sbjct: 123 IARLEQSRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGANS 182

Query: 184 LPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAAP 243
           +P+  + SN +I    ST  FA+++L  +HV G+LGNAA+ AIS+VA LHLHQVA     
Sbjct: 183 IPDGIE-SNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHH 242

Query: 244 LERDDIPFNRN-LRRTSRLKESSSNEDFSNFDVLSARG 280
           L++ +  F R+  R+T    +SS++    + DV+ ARG
Sbjct: 243 LQKKEDRFYRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

[Close]

BLAST of CSPI03G22120 vs. NCBI nr
Match: gi|449463466|ref|XP_004149455.1| (PREDICTED: plastid division protein PDV1 [Cucumis sativus])

HSP 1 Score: 534.6 bits (1376), Expect = 1.0e-148
Identity = 278/279 (99.64%), Postives = 278/279 (99.64%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNT 60
           MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNN NNNNKDSNNT
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNN-NNNNKDSNNT 60

Query: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120
           PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD
Sbjct: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120

Query: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180
           AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ
Sbjct: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180

Query: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA 240
           KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA
Sbjct: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA 240

Query: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
           APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG
Sbjct: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 278

[Close]

BLAST of CSPI03G22120 vs. NCBI nr
Match: gi|659077677|ref|XP_008439328.1| (PREDICTED: plastid division protein PDV1 [Cucumis melo])

HSP 1 Score: 523.5 bits (1347), Expect = 2.3e-145
Identity = 269/279 (96.42%), Postives = 273/279 (97.85%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNT 60
           MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFL STKHLRKSDNNNNNNNKDSNN 
Sbjct: 32  MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSDNNNNNNNKDSNNA 91

Query: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120
           PIPLPHTA+FPFI EFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD
Sbjct: 92  PIPLPHTAVFPFIDEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 151

Query: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180
           AAIARLEQSRI+LAMRLAEHHGKNYKVISEALAFVGDVRYAANYVS ENKDGPKFSP GQ
Sbjct: 152 AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENKDGPKFSPKGQ 211

Query: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA 240
           KPLPNSSKRSNTLIKMLFST+DFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYK 
Sbjct: 212 KPLPNSSKRSNTLIKMLFSTIDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKV 271

Query: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
           APLERDDIPF+RNLRRTSRLKESSSNEDFSNFDVLSARG
Sbjct: 272 APLERDDIPFDRNLRRTSRLKESSSNEDFSNFDVLSARG 310

[Close]

BLAST of CSPI03G22120 vs. NCBI nr
Match: gi|225462701|ref|XP_002266963.1| (PREDICTED: plastid division protein PDV1 [Vitis vinifera])

HSP 1 Score: 320.1 bits (819), Expect = 3.9e-84
Identity = 180/285 (63.16%), Postives = 215/285 (75.44%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNT 60
           MKW+MEIEEIEA+LEKIWDLHDKLS+AIHSISR HFL S K LRKSD +   N+ D N  
Sbjct: 1   MKWEMEIEEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKSDKSKPLNDVDENRF 60

Query: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120
                    F +  +FRV+ DD AIQEA+SLNAIRTALENLEDQLEFFHTVQV QQ ERD
Sbjct: 61  G--------FVYAKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAERD 120

Query: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180
           AAIARLEQSRI+LA+RL+EHHGK YKVI EA+AFVGDVR A  +V  +N  GP  SP G+
Sbjct: 121 AAIARLEQSRIVLAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPGK 180

Query: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYK- 240
              P+  KRSN LIK+L S  +F +KSLK+DH+GGILGNAA+VA+SM+A LHL+QV YK 
Sbjct: 181 NVAPHEEKRSNFLIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYKD 240

Query: 241 ----AAPLERDD-IPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
                 P +R+D I  NRN++RTSR++ SS + + +  DVL ARG
Sbjct: 241 KIVLEPPQKREDNIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 277

[Close]

BLAST of CSPI03G22120 vs. NCBI nr
Match: gi|590673617|ref|XP_007038943.1| (Plastid division protein PDV1 [Theobroma cacao])

HSP 1 Score: 312.8 bits (800), Expect = 6.2e-82
Identity = 175/280 (62.50%), Postives = 211/280 (75.36%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNT 60
           MKWDMEIEEIEAVLEKIWDLHDKLS+AIHSISR HFL S K LRKSD     N+   ++ 
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSIKALRKSDKKKLYNDAVGDD- 60

Query: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120
                + A F F+ +FR+D  +SAIQEA+SLNAIRTALENLEDQLE FHTV  QQQ ERD
Sbjct: 61  -----NRAGFVFVKDFRIDDSESAIQEAKSLNAIRTALENLEDQLEIFHTVHTQQQAERD 120

Query: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180
           AAIARLEQSRI+LA+RLAEHHGK YKVI EALAFVGDV  A+++VS EN      SP+G+
Sbjct: 121 AAIARLEQSRIILALRLAEHHGKKYKVIDEALAFVGDVHDASHFVSPENLYSTPVSPSGE 180

Query: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAY-K 240
               +  KRSN LIK+L S+L+FA+KSLK DH+GGIL NAA+ A+SM+A LHLHQ+AY +
Sbjct: 181 NLASHEGKRSNILIKVLVSSLNFAKKSLKFDHMGGILSNAALFAVSMIAMLHLHQIAYTE 240

Query: 241 AAPLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
            +  + DDI   R +R+ S+L   SS +  ++ DV SARG
Sbjct: 241 HSEKQEDDINRRRTVRKNSQLGGPSSYDCLNHLDVFSARG 274

[Close]

BLAST of CSPI03G22120 vs. NCBI nr
Match: gi|302143697|emb|CBI22558.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 311.2 bits (796), Expect = 1.8e-81
Identity = 177/281 (62.99%), Postives = 211/281 (75.09%), Query Frame = 1


Query: 5   MEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNNKDSNNTPIPL 64
           MEIEEIEA+LEKIWDLHDKLS+AIHSISR HFL S K LRKSD +   N+ D N      
Sbjct: 1   MEIEEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKSDKSKPLNDVDENRFG--- 60

Query: 65  PHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIA 124
                F +  +FRV+ DD AIQEA+SLNAIRTALENLEDQLEFFHTVQV QQ ERDAAIA
Sbjct: 61  -----FVYAKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAERDAAIA 120

Query: 125 RLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQKPLP 184
           RLEQSRI+LA+RL+EHHGK YKVI EA+AFVGDVR A  +V  +N  GP  SP G+   P
Sbjct: 121 RLEQSRIVLAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPGKNVAP 180

Query: 185 NSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYK----- 244
           +  KRSN LIK+L S  +F +KSLK+DH+GGILGNAA+VA+SM+A LHL+QV YK     
Sbjct: 181 HEEKRSNFLIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYKDKIVL 240

Query: 245 AAPLERDD-IPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 280
             P +R+D I  NRN++RTSR++ SS + + +  DVL ARG
Sbjct: 241 EPPQKREDNIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 273

The following BLAST results are available for this feature:

BLAST of CSPI03G22120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PDV1_ARATH	6.2e-66	53.24	Plastid division protein PDV1 OS=Arabidopsis thaliana GN=PDV1 PE=1 SV=1	[more]

BLAST of CSPI03G22120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCS6_CUCSA	7.0e-149	99.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357100 PE=4 SV=1	[more]
A0A061G8R9_THECC	4.3e-82	62.50	Plastid division protein PDV1 OS=Theobroma cacao GN=TCM_015337 PE=4 SV=1	[more]
E0CUK8_VITVI	1.3e-81	62.99	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02390 PE=4 SV=...	[more]
B9I535_POPTR	1.1e-80	59.93	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s01330g PE=4 SV=2	[more]
A9PED9_POPTR	3.1e-80	59.59	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]

BLAST of CSPI03G22120 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53280.1	3.5e-67	53.24	plastid division1	[more]

BLAST of CSPI03G22120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463466\|ref\|XP_004149455.1\|	1.0e-148	99.64	PREDICTED: plastid division protein PDV1 [Cucumis sativus]	[more]
gi\|659077677\|ref\|XP_008439328.1\|	2.3e-145	96.42	PREDICTED: plastid division protein PDV1 [Cucumis melo]	[more]
gi\|225462701\|ref\|XP_002266963.1\|	3.9e-84	63.16	PREDICTED: plastid division protein PDV1 [Vitis vinifera]	[more]
gi\|590673617\|ref\|XP_007038943.1\|	6.2e-82	62.50	Plastid division protein PDV1 [Theobroma cacao]	[more]
gi\|302143697\|emb\|CBI22558.3\|	1.8e-81	62.99	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010020	chloroplast fission
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G22120.1	CSPI03G22120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33600	FAMILY NOT NAMED	coord: 6..268 score: 1.5E
None	No IPR available	PANTHER	PTHR33600:SF4	PLASTID DIVISION PROTEIN PDV1	coord: 6..268 score: 1.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G22120	Cla004224	Watermelon (97103) v1	cpiwmB248
CSPI03G22120	Csa3G357100	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G22120	MELO3C006974	Melon (DHL92) v3.5.1	cpimeB246
CSPI03G22120	ClCG05G008660	Watermelon (Charleston Gray)	cpiwcgB243
CSPI03G22120	Lsi05G000700	Bottle gourd (USVL1VR-Ls)	cpilsiB216
CSPI03G22120	MELO3C006974.2	Melon (DHL92) v3.6.1	cpimedB244
CSPI03G22120	CsaV3_3G021850	Cucumber (Chinese Long) v3	cpicucB153
CSPI03G22120	Cla97C05G090820	Watermelon (97103) v2	cpiwmbB226
CSPI03G22120	Bhi01G001063	Wax gourd	cpiwgoB290
CSPI03G22120	Cucsa.012860	Cucumber (Gy14) v1	cgycpiB300
CSPI03G22120	CmaCh18G012950	Cucurbita maxima (Rimu)	cmacpiB415
CSPI03G22120	CmaCh16G000770	Cucurbita maxima (Rimu)	cmacpiB328
CSPI03G22120	CmoCh16G000800	Cucurbita moschata (Rifu)	cmocpiB319
CSPI03G22120	CmoCh18G013240	Cucurbita moschata (Rifu)	cmocpiB403
CSPI03G22120	Cp4.1LG14g06610	Cucurbita pepo (Zucchini)	cpecpiB210
CSPI03G22120	Cp4.1LG09g00410	Cucurbita pepo (Zucchini)	cpecpiB031
CSPI03G22120	CsGy3G021190	Cucumber (Gy14) v2	cgybcpiB119
CSPI03G22120	Carg15087	Silver-seed gourd	carcpiB1025
CSPI03G22120	Carg20359	Silver-seed gourd	carcpiB0572

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G22120	Cucumber (Gy14) v1	cgycpiB299
CSPI03G22120	Watermelon (97103) v1	cpiwmB218
CSPI03G22120	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G22120	Cucumber (Chinese Long) v3	cpicucB144