CmaCh16G000770 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G000770
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Plastid division protein PDV1
Location	Cma_Chr16 : 332085 .. 333861 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTATTTTCATTTTCTCTCTGTTTCCCTCCATGAAATGGGACATGGAGATCGAGGAAATCGAGGTTATCCTCGGGAAGATTTGGGACCTTCACGACAAGCTCAGTGAAGCAATTCACTCAATTTCCCGACATCACTTCCTCACCTCCACCAAAAATCTCAGGAAATCGGACAACAAGGATCCCAAGACCCCCAATGGCGTACCCGACACTGCCGCCTTCCCTTTCATCAACGAATTTCGGAATGACCTTGATGATTCTGCCACTCAGGAGGCTAGAAGCCTAAATGCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATGTACGTTCACTTTTCTTTCCTTTTTTTCCCTATTTCGCGCGCCTTATTTTCATTCACCTAATTTTATCACTCTCAGTGAGTAATTTGAAGAAAGCCACAACAGGGAAACATTGATTCGATCTTATTGTGGGGGATTCCGCACCTCTTTAGCTATGTTTAGGATTCAATAATGCTTTCCAATTGGAATTAAATCGCTAATTTATGATTTTCTGTGTTTTCTGCTGCCTGGAAGATTGAAAGGACGACTATTAGGTTCACTATTCCTTGGCTTCCTTGATTTTTGTTATACGTCATTATCCAATTAGCCAAAATATGGGATAGAGTATGAATTTCTTGTAGCGTTTGCTTAGTTTAATCTTTGGTTATTGGAAGCTCGTGTAAATTATGATTTCAGGGAGTCTTGCAGGATTTTCCTTTTCATTTTTATGTTAAAATTTTACGCTCAGTACAATTAGGTCTAGCAATTAGCCATACAACTTTCCATTTTGATGTTTGAATAATGAAAAGATGTAATCACACAAAACGGCTCTGTAAATCTATTCGAAATGATGAACAGATTCATATCAAATTTTGACAACTGACTCAGCGAATTCTTTCATTATGTTTGCAGACCGTGCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAGTGAGATTGGGTGATCATCATGGCAAGAACTATAAAGTCATCAATGAAGCTTTAGCGTTTGTTGGAGATGTGCGTTATACAGCTAACTATAATTCACATGAAAATCAATATGGTCAGAAGCCTGTGCCAAACAGTTCAAAGAGGTCTAGTACTCTGATCAAAATGCTACTCTCATCTCTCAATTTTGCAAGGACATCCCTCAAAATGGATCATGTGGGCGGAGCACTTGGCAATGCTGCCATGGTTGCGATTAGCATGCTTGCATTTCTGCATCTGCACCAGGTGGTAGCATACAGGAAGCCACAGCTTGAGAGACATGATATTCCCTTCGACAGAAACCTTCCAAGAACTTCACGGCTCCAGGAGTCTTCCCCAAATGAAGATTTCAGCAACTTTGACGTGTTATCCGCAAGGGGTTAGTGTGAATATTCTAAACTTATGAAGCTTTGGTGCATCTCATATGAGTTTCATTAAATGTCAGCGAGTCAAATGTGATAATGTCTGGTGTATGAAATTTTTTCGATTGATTTGTTAGAAGATTCTTCATCATTCTTGAGTTTGTCATGCGTATTGGATAGAGTTTTAAACCAGGTCCAATAAGTTAATAGTACAACTTCTAGCTTGCCAAGATTGCAATCCTCTACCTAGGTTGGTGTCCATTGAGGACCGTAAGAACAAACTATAGAGAATCCACCGAATGGCCCATAAGAGATGAGGAACTATACATGATCAAAGAGGAACTTGTTTAAACACGGC

mRNA sequence

TCTATTTTCATTTTCTCTCTGTTTCCCTCCATGAAATGGGACATGGAGATCGAGGAAATCGAGGTTATCCTCGGGAAGATTTGGGACCTTCACGACAAGCTCAGTGAAGCAATTCACTCAATTTCCCGACATCACTTCCTCACCTCCACCAAAAATCTCAGGAAATCGGACAACAAGGATCCCAAGACCCCCAATGGCGTACCCGACACTGCCGCCTTCCCTTTCATCAACGAATTTCGGAATGACCTTGATGATTCTGCCACTCAGGAGGCTAGAAGCCTAAATGCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATACCGTGCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAGTGAGATTGGGTGATCATCATGGCAAGAACTATAAAGTCATCAATGAAGCTTTAGCGTTTGTTGGAGATGTGCGTTATACAGCTAACTATAATTCACATGAAAATCAATATGGTCAGAAGCCTGTGCCAAACAGTTCAAAGAGGTCTAGTACTCTGATCAAAATGCTACTCTCATCTCTCAATTTTGCAAGGACATCCCTCAAAATGGATCATGTGGGCGGAGCACTTGGCAATGCTGCCATGGTTGCGATTAGCATGCTTGCATTTCTGCATCTGCACCAGGTGGTAGCATACAGGAAGCCACAGCTTGAGAGACATGATATTCCCTTCGACAGAAACCTTCCAAGAACTTCACGGCTCCAGGAGTCTTCCCCAAATGAAGATTTCAGCAACTTTGACGTGTTATCCGCAAGGGGTTAGTGTGAATATTCTAAACTTATGAAGCTTTGGTGCATCTCATATGAGTTTCATTAAATGTCAGCGAGTCAAATGTGATAATGTCTGGTGTATGAAATTTTTTCGATTGATTTGTTAGAAGATTCTTCATCATTCTTGAGTTTGTCATGCGTATTGGATAGAGTTTTAAACCAGGTCCAATAAGTTAATAGTACAACTTCTAGCTTGCCAAGATTGCAATCCTCTACCTAGGTTGGTGTCCATTGAGGACCGTAAGAACAAACTATAGAGAATCCACCGAATGGCCCATAAGAGATGAGGAACTATACATGATCAAAGAGGAACTTGTTTAAACACGGC

Coding sequence (CDS)

ATGAAATGGGACATGGAGATCGAGGAAATCGAGGTTATCCTCGGGAAGATTTGGGACCTTCACGACAAGCTCAGTGAAGCAATTCACTCAATTTCCCGACATCACTTCCTCACCTCCACCAAAAATCTCAGGAAATCGGACAACAAGGATCCCAAGACCCCCAATGGCGTACCCGACACTGCCGCCTTCCCTTTCATCAACGAATTTCGGAATGACCTTGATGATTCTGCCACTCAGGAGGCTAGAAGCCTAAATGCCATTCGAACTGCGCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATACCGTGCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTGTTCTTGCAGTGAGATTGGGTGATCATCATGGCAAGAACTATAAAGTCATCAATGAAGCTTTAGCGTTTGTTGGAGATGTGCGTTATACAGCTAACTATAATTCACATGAAAATCAATATGGTCAGAAGCCTGTGCCAAACAGTTCAAAGAGGTCTAGTACTCTGATCAAAATGCTACTCTCATCTCTCAATTTTGCAAGGACATCCCTCAAAATGGATCATGTGGGCGGAGCACTTGGCAATGCTGCCATGGTTGCGATTAGCATGCTTGCATTTCTGCATCTGCACCAGGTGGTAGCATACAGGAAGCCACAGCTTGAGAGACATGATATTCCCTTCGACAGAAACCTTCCAAGAACTTCACGGCTCCAGGAGTCTTCCCCAAATGAAGATTTCAGCAACTTTGACGTGTTATCCGCAAGGGGTTAG

Protein sequence

MKWDMEIEEIEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDPKTPNGVPDTAAFPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQSRIVLAVRLGDHHGKNYKVINEALAFVGDVRYTANYNSHENQYGQKPVPNSSKRSSTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYRKPQLERHDIPFDRNLPRTSRLQESSPNEDFSNFDVLSARG

Homology

[Close]

BLAST of CmaCh16G000770 vs. Swiss-Prot
Match: PDV1_ARATH (Plastid division protein PDV1 OS=Arabidopsis thaliana GN=PDV1 PE=1 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.4e-59
Identity = 130/270 (48.15%), Postives = 173/270 (64.07%), Query Frame = 1


Query: 4   DMEIEEIEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDN-KDPKTPNGVPDTAA 63
           +MEIEEIE +L KIWDLHDKLS+ IH IS+ HFL S K   +S+  K+P   +G      
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKRKNPHGNSGEDKRPG 62

Query: 64  FPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQS 123
           + FI  F  D +DS  QEA+SLNAIRTALENLEDQLEFFHT+  QQ+ E+D AIARLEQS
Sbjct: 63  YVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLEQS 122

Query: 124 RIVLAVRLGDHHGKNYKVINEALAFVGDVRYTANYNSHENQYGQKPVPNSSK------RS 183
           RI+LA+RL +HHGKNY V+ EALAFVG ++  ++Y S ++ Y     P+ +        S
Sbjct: 123 RILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGANSIPDGIES 182

Query: 184 STLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYRKPQLERHDIP 243
           + +I    S+  FA+ +L  +HV G LGNAA+ AIS++A LHLHQV        ++ D  
Sbjct: 183 NFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKKEDRF 242

Query: 244 FDRNLPRTSRLQESSPNEDFSNFDVLSARG 267
           +     +T    +SS +    + DV+ ARG
Sbjct: 243 YRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

[Close]

BLAST of CmaCh16G000770 vs. Swiss-Prot
Match: PDV2_ARATH (Plastid division protein PDV2 OS=Arabidopsis thaliana GN=PDV2 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.3e-06
Identity = 45/152 (29.61%), Postives = 72/152 (47.37%), Query Frame = 1


Query: 5   MEIEE-IEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDPKTPNGVPDTAAF 64
           ME EE I +IL +  +L  K+S+ I + S             SDN D        +    
Sbjct: 1   MEDEEGIGLILARATELRLKISDCIDNSST----------TVSDNGDGNEDLSPGEGRKS 60

Query: 65  PFINEFRNDLDDSATQ-----EARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIAR 124
             I     D D  +++     EA  L  IR ALE LE QL     ++ +QQ E+  A++ 
Sbjct: 61  EIIGNQDKDFDSISSEDVDEAEAERLLRIRDALEALESQLASLQNLRQRQQYEKQLALSE 120

Query: 125 LEQSRIVLAVRLGDHHGKNYKVINEALAFVGD 151
           ++ SR +L  +L ++ GK+++V+ E   F G+
Sbjct: 121 IDYSRKMLLEKLKEYKGKDFEVLRETTTFAGE 142

[Close]

BLAST of CmaCh16G000770 vs. TrEMBL
Match: A0A0A0LCS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357100 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.0e-109
Identity = 220/279 (78.85%), Postives = 238/279 (85.30%), Query Frame = 1


Query: 1   MKWDMEIEEIEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDPK------TP 60
           MKWDMEIEEIE +L KIWDLHDKLSEAIHSISR HFL STK+LRKSDN +        TP
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNKDSNNTP 60

Query: 61  NGVPDTAAFPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120
             +P TA FPFI+EFR DLDDSA QEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA
Sbjct: 61  IPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120

Query: 121 AIARLEQSRIVLAVRLGDHHGKNYKVINEALAFVGDVRYTANYNSHENQ-------YGQK 180
           AIARLEQSRI+LA+RL +HHGKNYKVI+EALAFVGDVRY ANY S EN+        GQK
Sbjct: 121 AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK 180

Query: 181 PVPNSSKRSSTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYRK 240
           P+PNSSKRS+TLIKML S+L+FAR SLKMDHVGG LGNAAMVAISM+AFLHLHQ VAY+ 
Sbjct: 181 PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQ-VAYKA 240

Query: 241 PQLERHDIPFDRNLPRTSRLQESSPNEDFSNFDVLSARG 267
             LER DIPF+RNL RTSRL+ESS NEDFSNFDVLSARG
Sbjct: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 278

[Close]

BLAST of CmaCh16G000770 vs. TrEMBL
Match: A0A061G8R9_THECC (Plastid division protein PDV1 OS=Theobroma cacao GN=TCM_015337 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.4e-74
Identity = 163/276 (59.06%), Postives = 196/276 (71.01%), Query Frame = 1


Query: 1   MKWDMEIEEIEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDPKTPN---GV 60
           MKWDMEIEEIE +L KIWDLHDKLS+AIHSISR HFL S K LRKSD K  K  N   G 
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSIKALRKSDKK--KLYNDAVGD 60

Query: 61  PDTAAFPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIA 120
            + A F F+ +FR D  +SA QEA+SLNAIRTALENLEDQLE FHTV  QQQ ERDAAIA
Sbjct: 61  DNRAGFVFVKDFRIDDSESAIQEAKSLNAIRTALENLEDQLEIFHTVHTQQQAERDAAIA 120

Query: 121 RLEQSRIVLAVRLGDHHGKNYKVINEALAFVGDVRYTANYNSHENQY-------GQKPVP 180
           RLEQSRI+LA+RL +HHGK YKVI+EALAFVGDV   +++ S EN Y       G+    
Sbjct: 121 RLEQSRIILALRLAEHHGKKYKVIDEALAFVGDVHDASHFVSPENLYSTPVSPSGENLAS 180

Query: 181 NSSKRSSTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYRKPQL 240
           +  KRS+ LIK+L+SSLNFA+ SLK DH+GG L NAA+ A+SM+A LHLHQ+      + 
Sbjct: 181 HEGKRSNILIKVLVSSLNFAKKSLKFDHMGGILSNAALFAVSMIAMLHLHQIAYTEHSEK 240

Query: 241 ERHDIPFDRNLPRTSRLQESSPNEDFSNFDVLSARG 267
           +  DI   R + + S+L   S  +  ++ DV SARG
Sbjct: 241 QEDDINRRRTVRKNSQLGGPSSYDCLNHLDVFSARG 274

[Close]

BLAST of CmaCh16G000770 vs. TrEMBL
Match: E0CUK8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02390 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 7.0e-74
Identity = 163/275 (59.27%), Postives = 196/275 (71.27%), Query Frame = 1


Query: 5   MEIEEIEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDPKTPNGVPDTA-AF 64
           MEIEEIE IL KIWDLHDKLS+AIHSISR HFL S K+LRKSD   P   N V +    F
Sbjct: 1   MEIEEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKSDKSKPL--NDVDENRFGF 60

Query: 65  PFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQSR 124
            +  +FR + DD A QEA+SLNAIRTALENLEDQLEFFHTVQV QQ ERDAAIARLEQSR
Sbjct: 61  VYAKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAERDAAIARLEQSR 120

Query: 125 IVLAVRLGDHHGKNYKVINEALAFVGDVRYTANYNSHENQY-------GQKPVPNSSKRS 184
           IVLA+RL +HHGK YKVI EA+AFVGDVR    +   +N +       G+   P+  KRS
Sbjct: 121 IVLAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPGKNVAPHEEKRS 180

Query: 185 STLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQV-----VAYRKPQLE 244
           + LIK+L+S  NF + SLK+DH+GG LGNAA+VA+SMLA LHL+QV     +    PQ  
Sbjct: 181 NFLIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYKDKIVLEPPQKR 240

Query: 245 RHDIPFDRNLPRTSRLQESSPNEDFSNFDVLSARG 267
             +I  +RN+ RTSR++ SS + + +  DVL ARG
Sbjct: 241 EDNIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 273

[Close]

BLAST of CmaCh16G000770 vs. TrEMBL
Match: A0A067JRN3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26010 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.0e-72
Identity = 155/268 (57.84%), Postives = 191/268 (71.27%), Query Frame = 1


Query: 5   MEIEEIEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDPKTPNGVPDTAAFP 64
           MEIEEIE +L KIWDLHDKLS+AIHSISR HFL S +NLRKSD K     +     + F 
Sbjct: 1   MEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSVRNLRKSDKKKLNNDDVEDTRSGFV 60

Query: 65  FINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQSRI 124
           F+ +FR D +D A QEA+SLNAIRTALENLEDQLEFFHTVQ+QQ+ ERDAAIARLEQSRI
Sbjct: 61  FVKDFRVDDNDFAIQEAKSLNAIRTALENLEDQLEFFHTVQIQQRAERDAAIARLEQSRI 120

Query: 125 VLAVRLGDHHGKNYKVINEALAFVGDVRYTANYNSHENQYGQKPVPNSSK------RSST 184
           VLA+RL +HHGK YKV+ EALAFVGDV   +++ S EN YG    P+  K       S+ 
Sbjct: 121 VLAMRLAEHHGKKYKVLEEALAFVGDVHDASDFVSPENLYGSSLNPSDQKLDRCDQGSNI 180

Query: 185 LIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYRKPQLERHDIPFD 244
           ++K+L+SS +F RTSLK D +GG LGNAA+ A+SMLA LHLHQV     P  +   I  +
Sbjct: 181 VMKVLISSFDFVRTSLKWDQMGGMLGNAAVFAVSMLALLHLHQVAYKEHPYKQEELIYRN 240

Query: 245 RNLPRTSRLQESSPNEDFSNFDVLSARG 267
           RN+ +  ++  SS N + +  DV+ ARG
Sbjct: 241 RNVSKAPQIDGSSSNGNLNRLDVMLARG 268

[Close]

BLAST of CmaCh16G000770 vs. TrEMBL
Match: A0A0D2TDP8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G271100 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.9e-71
Identity = 160/278 (57.55%), Postives = 198/278 (71.22%), Query Frame = 1


Query: 1   MKWDMEIEEIEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDPKTPNGV--- 60
           MKWDMEIEEIE +L KIWDLHDKLS+AIHSISR HFL S K L++SD K  K  N V   
Sbjct: 4   MKWDMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSIKALKESDKK--KLYNDVVVG 63

Query: 61  --PDTAAFPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAA 120
              +   F ++ EFR D  DSA QEA+SLNAIRTALENLEDQLEFFHTVQ+QQ+VERDAA
Sbjct: 64  ADDNRTGFVYVKEFRIDDGDSAIQEAKSLNAIRTALENLEDQLEFFHTVQIQQRVERDAA 123

Query: 121 IARLEQSRIVLAVRLGDHHGKNYKVINEALAFVGDVRYTANYNSHENQY-------GQKP 180
           IARLEQSRI+LA+RL DHHGK YKVI+EALAFVGDV   + Y S +N Y       G+  
Sbjct: 124 IARLEQSRIILALRLADHHGKKYKVIDEALAFVGDVHDASRYISPKNLYCSPISPSGENL 183

Query: 181 VPNSSKRSSTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYRKP 240
             +  K ++ LIK+++SS N+A+ SLK DH+GG L NAA+ A+SM+A +HLHQ +A+   
Sbjct: 184 ASHEGKHTNMLIKLIVSSFNYAKKSLKFDHMGGILSNAAIFAVSMIAMMHLHQ-IAFTDG 243

Query: 241 QLERHDIPFDRNLPRTSRLQESSPNEDFSNFDVLSARG 267
           + E  +I   RN  + S+L+  S  +  S+ DV  ARG
Sbjct: 244 RPE-ENINNRRNPRKNSQLEGPSSYDHSSHLDVYLARG 277

[Close]

BLAST of CmaCh16G000770 vs. TAIR10
Match: AT5G53280.1 (AT5G53280.1 plastid division1)

HSP 1 Score: 229.2 bits (583), Expect = 3.0e-60
Identity = 130/270 (48.15%), Postives = 173/270 (64.07%), Query Frame = 1


Query: 4   DMEIEEIEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDN-KDPKTPNGVPDTAA 63
           +MEIEEIE +L KIWDLHDKLS+ IH IS+ HFL S K   +S+  K+P   +G      
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKRKNPHGNSGEDKRPG 62

Query: 64  FPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQS 123
           + FI  F  D +DS  QEA+SLNAIRTALENLEDQLEFFHT+  QQ+ E+D AIARLEQS
Sbjct: 63  YVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARLEQS 122

Query: 124 RIVLAVRLGDHHGKNYKVINEALAFVGDVRYTANYNSHENQYGQKPVPNSSK------RS 183
           RI+LA+RL +HHGKNY V+ EALAFVG ++  ++Y S ++ Y     P+ +        S
Sbjct: 123 RILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGANSIPDGIES 182

Query: 184 STLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYRKPQLERHDIP 243
           + +I    S+  FA+ +L  +HV G LGNAA+ AIS++A LHLHQV        ++ D  
Sbjct: 183 NFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKKEDRF 242

Query: 244 FDRNLPRTSRLQESSPNEDFSNFDVLSARG 267
           +     +T    +SS +    + DV+ ARG
Sbjct: 243 YRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

[Close]

BLAST of CmaCh16G000770 vs. TAIR10
Match: AT2G16070.2 (AT2G16070.2 plastid division2)

HSP 1 Score: 53.1 bits (126), Expect = 3.0e-07
Identity = 45/152 (29.61%), Postives = 72/152 (47.37%), Query Frame = 1


Query: 5   MEIEE-IEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDPKTPNGVPDTAAF 64
           ME EE I +IL +  +L  K+S+ I + S             SDN D        +    
Sbjct: 1   MEDEEGIGLILARATELRLKISDCIDNSST----------TVSDNGDGNEDLSPGEGRKS 60

Query: 65  PFINEFRNDLDDSATQ-----EARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIAR 124
             I     D D  +++     EA  L  IR ALE LE QL     ++ +QQ E+  A++ 
Sbjct: 61  EIIGNQDKDFDSISSEDVDEAEAERLLRIRDALEALESQLASLQNLRQRQQYEKQLALSE 120

Query: 125 LEQSRIVLAVRLGDHHGKNYKVINEALAFVGD 151
           ++ SR +L  +L ++ GK+++V+ E   F G+
Sbjct: 121 IDYSRKMLLEKLKEYKGKDFEVLRETTTFAGE 142

[Close]

BLAST of CmaCh16G000770 vs. NCBI nr
Match: gi|659077677|ref|XP_008439328.1| (PREDICTED: plastid division protein PDV1 [Cucumis melo])

HSP 1 Score: 409.5 bits (1051), Expect = 4.6e-111
Identity = 222/280 (79.29%), Postives = 239/280 (85.36%), Query Frame = 1


Query: 1   MKWDMEIEEIEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDPKT------- 60
           MKWDMEIEEIE +L KIWDLHDKLSEAIHSISR HFLTSTK+LRKSDN +          
Sbjct: 32  MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSDNNNNNNNKDSNNA 91

Query: 61  PNGVPDTAAFPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120
           P  +P TA FPFI+EFR DLDDSA QEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD
Sbjct: 92  PIPLPHTAVFPFIDEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 151

Query: 121 AAIARLEQSRIVLAVRLGDHHGKNYKVINEALAFVGDVRYTANYNSHENQ-------YGQ 180
           AAIARLEQSRIVLA+RL +HHGKNYKVI+EALAFVGDVRY ANY SHEN+        GQ
Sbjct: 152 AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENKDGPKFSPKGQ 211

Query: 181 KPVPNSSKRSSTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYR 240
           KP+PNSSKRS+TLIKML S+++FAR SLKMDHVGG LGNAAMVAISM+AFLHLHQ VAY+
Sbjct: 212 KPLPNSSKRSNTLIKMLFSTIDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQ-VAYK 271

Query: 241 KPQLERHDIPFDRNLPRTSRLQESSPNEDFSNFDVLSARG 267
              LER DIPFDRNL RTSRL+ESS NEDFSNFDVLSARG
Sbjct: 272 VAPLERDDIPFDRNLRRTSRLKESSSNEDFSNFDVLSARG 310

[Close]

BLAST of CmaCh16G000770 vs. NCBI nr
Match: gi|449463466|ref|XP_004149455.1| (PREDICTED: plastid division protein PDV1 [Cucumis sativus])

HSP 1 Score: 404.4 bits (1038), Expect = 1.5e-109
Identity = 220/279 (78.85%), Postives = 238/279 (85.30%), Query Frame = 1


Query: 1   MKWDMEIEEIEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDPK------TP 60
           MKWDMEIEEIE +L KIWDLHDKLSEAIHSISR HFL STK+LRKSDN +        TP
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNKDSNNTP 60

Query: 61  NGVPDTAAFPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120
             +P TA FPFI+EFR DLDDSA QEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA
Sbjct: 61  IPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120

Query: 121 AIARLEQSRIVLAVRLGDHHGKNYKVINEALAFVGDVRYTANYNSHENQ-------YGQK 180
           AIARLEQSRI+LA+RL +HHGKNYKVI+EALAFVGDVRY ANY S EN+        GQK
Sbjct: 121 AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK 180

Query: 181 PVPNSSKRSSTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYRK 240
           P+PNSSKRS+TLIKML S+L+FAR SLKMDHVGG LGNAAMVAISM+AFLHLHQ VAY+ 
Sbjct: 181 PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQ-VAYKA 240

Query: 241 PQLERHDIPFDRNLPRTSRLQESSPNEDFSNFDVLSARG 267
             LER DIPF+RNL RTSRL+ESS NEDFSNFDVLSARG
Sbjct: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 278

[Close]

BLAST of CmaCh16G000770 vs. NCBI nr
Match: gi|225462701|ref|XP_002266963.1| (PREDICTED: plastid division protein PDV1 [Vitis vinifera])

HSP 1 Score: 294.3 bits (752), Expect = 2.2e-76
Identity = 166/279 (59.50%), Postives = 200/279 (71.68%), Query Frame = 1


Query: 1   MKWDMEIEEIEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDPKTPNGVPDT 60
           MKW+MEIEEIE IL KIWDLHDKLS+AIHSISR HFL S K+LRKSD   P   N V + 
Sbjct: 1   MKWEMEIEEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKSDKSKPL--NDVDEN 60

Query: 61  A-AFPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARL 120
              F +  +FR + DD A QEA+SLNAIRTALENLEDQLEFFHTVQV QQ ERDAAIARL
Sbjct: 61  RFGFVYAKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAERDAAIARL 120

Query: 121 EQSRIVLAVRLGDHHGKNYKVINEALAFVGDVRYTANYNSHENQY-------GQKPVPNS 180
           EQSRIVLA+RL +HHGK YKVI EA+AFVGDVR    +   +N +       G+   P+ 
Sbjct: 121 EQSRIVLAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPGKNVAPHE 180

Query: 181 SKRSSTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQV-----VAYRK 240
            KRS+ LIK+L+S  NF + SLK+DH+GG LGNAA+VA+SMLA LHL+QV     +    
Sbjct: 181 EKRSNFLIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYKDKIVLEP 240

Query: 241 PQLERHDIPFDRNLPRTSRLQESSPNEDFSNFDVLSARG 267
           PQ    +I  +RN+ RTSR++ SS + + +  DVL ARG
Sbjct: 241 PQKREDNIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 277

[Close]

BLAST of CmaCh16G000770 vs. NCBI nr
Match: gi|802767779|ref|XP_012090124.1| (PREDICTED: plastid division protein PDV1 [Jatropha curcas])

HSP 1 Score: 290.0 bits (741), Expect = 4.1e-75
Identity = 158/272 (58.09%), Postives = 195/272 (71.69%), Query Frame = 1


Query: 1   MKWDMEIEEIEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDPKTPNGVPDT 60
           MKW+MEIEEIE +L KIWDLHDKLS+AIHSISR HFL S +NLRKSD K     +     
Sbjct: 1   MKWNMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSVRNLRKSDKKKLNNDDVEDTR 60

Query: 61  AAFPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLE 120
           + F F+ +FR D +D A QEA+SLNAIRTALENLEDQLEFFHTVQ+QQ+ ERDAAIARLE
Sbjct: 61  SGFVFVKDFRVDDNDFAIQEAKSLNAIRTALENLEDQLEFFHTVQIQQRAERDAAIARLE 120

Query: 121 QSRIVLAVRLGDHHGKNYKVINEALAFVGDVRYTANYNSHENQYGQKPVPNSSK------ 180
           QSRIVLA+RL +HHGK YKV+ EALAFVGDV   +++ S EN YG    P+  K      
Sbjct: 121 QSRIVLAMRLAEHHGKKYKVLEEALAFVGDVHDASDFVSPENLYGSSLNPSDQKLDRCDQ 180

Query: 181 RSSTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYRKPQLERHD 240
            S+ ++K+L+SS +F RTSLK D +GG LGNAA+ A+SMLA LHLHQV     P  +   
Sbjct: 181 GSNIVMKVLISSFDFVRTSLKWDQMGGMLGNAAVFAVSMLALLHLHQVAYKEHPYKQEEL 240

Query: 241 IPFDRNLPRTSRLQESSPNEDFSNFDVLSARG 267
           I  +RN+ +  ++  SS N + +  DV+ ARG
Sbjct: 241 IYRNRNVSKAPQIDGSSSNGNLNRLDVMLARG 272

[Close]

BLAST of CmaCh16G000770 vs. NCBI nr
Match: gi|590673617|ref|XP_007038943.1| (Plastid division protein PDV1 [Theobroma cacao])

HSP 1 Score: 287.7 bits (735), Expect = 2.0e-74
Identity = 163/276 (59.06%), Postives = 196/276 (71.01%), Query Frame = 1


Query: 1   MKWDMEIEEIEVILGKIWDLHDKLSEAIHSISRHHFLTSTKNLRKSDNKDPKTPN---GV 60
           MKWDMEIEEIE +L KIWDLHDKLS+AIHSISR HFL S K LRKSD K  K  N   G 
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSIKALRKSDKK--KLYNDAVGD 60

Query: 61  PDTAAFPFINEFRNDLDDSATQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIA 120
            + A F F+ +FR D  +SA QEA+SLNAIRTALENLEDQLE FHTV  QQQ ERDAAIA
Sbjct: 61  DNRAGFVFVKDFRIDDSESAIQEAKSLNAIRTALENLEDQLEIFHTVHTQQQAERDAAIA 120

Query: 121 RLEQSRIVLAVRLGDHHGKNYKVINEALAFVGDVRYTANYNSHENQY-------GQKPVP 180
           RLEQSRI+LA+RL +HHGK YKVI+EALAFVGDV   +++ S EN Y       G+    
Sbjct: 121 RLEQSRIILALRLAEHHGKKYKVIDEALAFVGDVHDASHFVSPENLYSTPVSPSGENLAS 180

Query: 181 NSSKRSSTLIKMLLSSLNFARTSLKMDHVGGALGNAAMVAISMLAFLHLHQVVAYRKPQL 240
           +  KRS+ LIK+L+SSLNFA+ SLK DH+GG L NAA+ A+SM+A LHLHQ+      + 
Sbjct: 181 HEGKRSNILIKVLVSSLNFAKKSLKFDHMGGILSNAALFAVSMIAMLHLHQIAYTEHSEK 240

Query: 241 ERHDIPFDRNLPRTSRLQESSPNEDFSNFDVLSARG 267
           +  DI   R + + S+L   S  +  ++ DV SARG
Sbjct: 241 QEDDINRRRTVRKNSQLGGPSSYDCLNHLDVFSARG 274

The following BLAST results are available for this feature:

BLAST of CmaCh16G000770 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PDV1_ARATH	5.4e-59	48.15	Plastid division protein PDV1 OS=Arabidopsis thaliana GN=PDV1 PE=1 SV=1	[more]
PDV2_ARATH	5.3e-06	29.61	Plastid division protein PDV2 OS=Arabidopsis thaliana GN=PDV2 PE=1 SV=1	[more]

BLAST of CmaCh16G000770 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCS6_CUCSA	1.0e-109	78.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357100 PE=4 SV=1	[more]
A0A061G8R9_THECC	1.4e-74	59.06	Plastid division protein PDV1 OS=Theobroma cacao GN=TCM_015337 PE=4 SV=1	[more]
E0CUK8_VITVI	7.0e-74	59.27	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02390 PE=4 SV=...	[more]
A0A067JRN3_JATCU	1.0e-72	57.84	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26010 PE=4 SV=1	[more]
A0A0D2TDP8_GOSRA	1.9e-71	57.55	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G271100 PE=4 SV=1	[more]

BLAST of CmaCh16G000770 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53280.1	3.0e-60	48.15	plastid division1	[more]
AT2G16070.2	3.0e-07	29.61	plastid division2	[more]

BLAST of CmaCh16G000770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077677\|ref\|XP_008439328.1\|	4.6e-111	79.29	PREDICTED: plastid division protein PDV1 [Cucumis melo]	[more]
gi\|449463466\|ref\|XP_004149455.1\|	1.5e-109	78.85	PREDICTED: plastid division protein PDV1 [Cucumis sativus]	[more]
gi\|225462701\|ref\|XP_002266963.1\|	2.2e-76	59.50	PREDICTED: plastid division protein PDV1 [Vitis vinifera]	[more]
gi\|802767779\|ref\|XP_012090124.1\|	4.1e-75	58.09	PREDICTED: plastid division protein PDV1 [Jatropha curcas]	[more]
gi\|590673617\|ref\|XP_007038943.1\|	2.0e-74	59.06	Plastid division protein PDV1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010020	chloroplast fission
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G000770.1	CmaCh16G000770.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 77..97 scor
None	No IPR available	PANTHER	PTHR33600	FAMILY NOT NAMED	coord: 6..251 score: 5.9E
None	No IPR available	PANTHER	PTHR33600:SF4	PLASTID DIVISION PROTEIN PDV1	coord: 6..251 score: 5.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G000770	Cucsa.012860	Cucumber (Gy14) v1	cgycmaB0549
CmaCh16G000770	Cla004224	Watermelon (97103) v1	cmawmB316
CmaCh16G000770	Csa3G357100	Cucumber (Chinese Long) v2	cmacuB322
CmaCh16G000770	MELO3C006974	Melon (DHL92) v3.5.1	cmameB296
CmaCh16G000770	ClCG05G008660	Watermelon (Charleston Gray)	cmawcgB296
CmaCh16G000770	CSPI03G22120	Wild cucumber (PI 183967)	cmacpiB328
CmaCh16G000770	CmoCh18G013240	Cucurbita moschata (Rifu)	cmacmoB327
CmaCh16G000770	CmoCh16G000800	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G000770	Lsi05G000700	Bottle gourd (USVL1VR-Ls)	cmalsiB318
CmaCh16G000770	Cp4.1LG09g00410	Cucurbita pepo (Zucchini)	cmacpeB339
CmaCh16G000770	Cp4.1LG14g06610	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G000770	MELO3C006974.2	Melon (DHL92) v3.6.1	cmamedB344
CmaCh16G000770	CsaV3_3G021850	Cucumber (Chinese Long) v3	cmacucB0384
CmaCh16G000770	Cla97C05G090820	Watermelon (97103) v2	cmawmbB346
CmaCh16G000770	Bhi01G001063	Wax gourd	cmawgoB0439
CmaCh16G000770	CsGy3G021190	Cucumber (Gy14) v2	cgybcmaB343
CmaCh16G000770	Carg15087	Silver-seed gourd	carcmaB1366
CmaCh16G000770	Carg20359	Silver-seed gourd	carcmaB0752

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh16G000770	CmaCh18G012950	Cucurbita maxima (Rimu)	cmacmaB338

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G000770	Cucumber (Chinese Long) v3	cmacucB0398
CmaCh16G000770	Cucumber (Chinese Long) v3	cmacucB0376
CmaCh16G000770	Cucumber (Chinese Long) v3	cmacucB0402
CmaCh16G000770	Cucumber (Chinese Long) v3	cmacucB0408
CmaCh16G000770	Watermelon (97103) v2	cmawmbB324
CmaCh16G000770	Watermelon (97103) v2	cmawmbB344
CmaCh16G000770	Wax gourd	cmawgoB0428
CmaCh16G000770	Cucurbita maxima (Rimu)	cmacmaB243
CmaCh16G000770	Cucurbita maxima (Rimu)	cmacmaB300
CmaCh16G000770	Cucurbita maxima (Rimu)	cmacmaB346
CmaCh16G000770	Cucumber (Gy14) v1	cgycmaB0600
CmaCh16G000770	Cucurbita moschata (Rifu)	cmacmoB319
CmaCh16G000770	Cucurbita moschata (Rifu)	cmacmoB333
CmaCh16G000770	Wild cucumber (PI 183967)	cmacpiB346
CmaCh16G000770	Cucumber (Chinese Long) v2	cmacuB342
CmaCh16G000770	Melon (DHL92) v3.5.1	cmameB283
CmaCh16G000770	Watermelon (Charleston Gray)	cmawcgB289
CmaCh16G000770	Watermelon (Charleston Gray)	cmawcgB295
CmaCh16G000770	Watermelon (97103) v1	cmawmB318
CmaCh16G000770	Cucurbita pepo (Zucchini)	cmacpeB343
CmaCh16G000770	Cucurbita pepo (Zucchini)	cmacpeB358
CmaCh16G000770	Bottle gourd (USVL1VR-Ls)	cmalsiB298
CmaCh16G000770	Bottle gourd (USVL1VR-Ls)	cmalsiB320
CmaCh16G000770	Cucumber (Gy14) v2	cgybcmaB336
CmaCh16G000770	Cucumber (Gy14) v2	cgybcmaB618
CmaCh16G000770	Melon (DHL92) v3.6.1	cmamedB326
CmaCh16G000770	Melon (DHL92) v3.6.1	cmamedB338
CmaCh16G000770	Silver-seed gourd	carcmaB0713