Cucsa.012860 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.012860
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Plastid division protein PDV1
Location	scaffold00164 : 645418 .. 647704 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCTCTGTTTCCCTCCATGAAATGGGACATGGAGATCGAGGAAATCGAGGCCGTCCTCGAGAAGATTTGGGATCTTCACGACAAGCTCAGTGAAGCTATTCACTCAATTTCCCGAGATCACTTCCTCGCCTCCACCAAACATCTCAGGAAATCTGACAACAACAACAACAAGGATTCCAACAACACCCCCATTCCCTTACCCCACACTGCTCTCTTCCCTTTCATCCACGAATTCCGGGTTGACCTTGATGATTCTGCCATCCAGGAAGCCAGAAGTCTTAATGCCATTCGAACTGCTCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATGTATCTTCCTTTTTCTTCCCTATTTCCTTTTCCTTCTTTTAATTCTCTCGTTTCTTTAGTTTTTCAGTCGGTAGAGACAACAGGACAAGTTTTGTTTTCGATATTATTGGGGATTTCCATTATTGCCCAAACAAACAGATTATGTACTCATAGCTCTATGTTTGCGATTCAATTACGTGATTTTTCTTCATTTTCAGTAGGGATAGATTCGGCAGTATACGAATTTCTTTGTTGTCTGCTGTCTGGAAGACTGAAGGGAAGAGTTCCTTCTAGGTTCACTATTCTTTGCCTTCCTTGATTTTTCTTCATTTGTGCTGTCTATGTCCATTTTTCCTGAAGATTGGACGGGGTTGCTAATTTCTTAACGTTGACTGTTTACTTTGGTTTCTGTTTATTGGATGCTTGTGTAGATTATGATTTTAGGTAGTCGTACGGCAGTTTCCTTTTCATTTTTTGAAATTAAGATTTCAAGCTTAGTAGAATTAGGGATAACAACTGTATGTCCATCATAGAATTTTCTACTTTGATGTTTGAATAAATGAAAGTATGTAATCACACAAAACGGCTCCGTAATTCTATTGAAAAAGATGAACAGATTCCTATCAAATTGTGAAAGAACCATTTTTGGTCCAATCATAGTGCCATTGGGGCGCCACTAAAGAGTAGTAGTACTTGGTGTATCCCAAGATGCACCCATCTCACACACGCGCAAGAATTAAAATCGTGGAAATTTTCTCCTTTTAGTCCGTCCTGAATGGTTTCCATTTAACCAAGTTCTTTTCTTTTCTCGAAGAATAAACTATAATTTAGAACAATGGAAGCTTTCGTTCCTATAGAAATCATGACTCTTATATTATTTAACTACACGAGTCATTCAGTGACTAGTTAAGAATAAATAGCAGCAAATTGTTTTGAATAGAGGCTCCTAAGCAATGGAAGCTCGGTTTATTGGTTTGCTCTTGATTTTTTATTTCATTTTGCTCAACTAAAGCTCAGTGTCTTACCAGAGAACTTGCAACTTCATGTTCTGCATTTAAATGAAAGCAGTAGTGTGCTGCATTCTTATGTTCCTTCTCACTTATAGGGTTATGTTGTTAACTATTTCATTGAAGTGAATATTGACTGGACAATTGACTCACCGGATTCTTTCTTTTTATTTTCAGACCGTTCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTCTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCTTTAGCGTTTGTTGGAGATGTACGTTATGCAGCTAACTATGTTTCACAAGAAAACAAAGATGGTCCAAAGTTTAGCCCGAATGGTCAGAAGCCATTGCCGAACAGTTCAAAGAGGTCTAATACTCTGATCAAGATGCTATTTTCAACCCTCGACTTTGCTAGGAAATCTCTCAAAATGGATCATGTGGGCGGGATACTTGGCAATGCTGCCATGGTTGCAATTAGCATGGTTGCATTTCTGCATCTCCACCAGGTAGCATATAAGGCGGCACCACTGGAGAGAGACGATATTCCTTTCAACAGAAACCTTCGAAGAACTTCTCGGCTCAAGGAATCTTCGTCAAATGAAGATTTCAGCAACTTTGACGTCTTATCCGCCAGGGGTTAGTGTGAATATATAAAAAATTTCAAGCTTTGATGCATCTCTTATCAGTTGATTTAAATATGAGCTGGCTGTTTGATAATGTCTGTTGTATGAAAATGATTTGATTTAATAGTTAGAAATTTTCTTCATCATTCTTGAGGTTGTAATTGTCTATTGAATTGAGAGCTTTAAATCTTGAGTCCACTGAGTTGTTCAACAAACAAAAACAATTATGATTGGAATACCAAAACTTCTAGCTTGCCTCAAGTTATGAAGCAAGGATATGCCTGTTGGGCCTGA

mRNA sequence

TCCCTCTGTTTCCCTCCATGAAATGGGACATGGAGATCGAGGAAATCGAGGCCGTCCTCGAGAAGATTTGGGATCTTCACGACAAGCTCAGTGAAGCTATTCACTCAATTTCCCGAGATCACTTCCTCGCCTCCACCAAACATCTCAGGAAATCTGACAACAACAACAACAAGGATTCCAACAACACCCCCATTCCCTTACCCCACACTGCTCTCTTCCCTTTCATCCACGAATTCCGGGTTGACCTTGATGATTCTGCCATCCAGGAAGCCAGAAGTCTTAATGCCATTCGAACTGCTCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATACCGTTCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTCTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCTTTAGCGTTTGTTGGAGATGTACGTTATGCAGCTAACTATGTTTCACAAGAAAACAAAGATGGTCCAAAGTTTAGCCCGAATGGTCAGAAGCCATTGCCGAACAGTTCAAAGAGGTCTAATACTCTGATCAAGATGCTATTTTCAACCCTCGACTTTGCTAGGAAATCTCTCAAAATGGATCATGTGGGCGGGATACTTGGCAATGCTGCCATGGTTGCAATTAGCATGGTTGCATTTCTGCATCTCCACCAGGTAGCATATAAGGCGGCACCACTGGAGAGAGACGATATTCCTTTCAACAGAAACCTTCGAAGAACTTCTCGGCTCAAGGAATCTTCGTCAAATGAAGATTTCAGCAACTTTGACGTCTTATCCGCCAGGGGTTAGTGTGAATATATAAAAAATTTCAAGCTTTGATGCATCTCTTATCAGTTGATTTAAATATGAGCTGGCTGTTTGATAATGTCTGTTGTATGAAAATGATTTGATTTAATAGTTAGAAATTTTCTTCATCATTCTTGAGGTTGTAATTGTCTATTGAATTGAGAGCTTTAAATCTTGAGTCCACTGAGTTGTTCAACAAACAAAAACAATTATGATTGGAATACCAAAACTTCTAGCTTGCCTCAAGTTATGAAGCAAGGATATGCCTGTTGGGCCTGA

Coding sequence (CDS)

ATGAAATGGGACATGGAGATCGAGGAAATCGAGGCCGTCCTCGAGAAGATTTGGGATCTTCACGACAAGCTCAGTGAAGCTATTCACTCAATTTCCCGAGATCACTTCCTCGCCTCCACCAAACATCTCAGGAAATCTGACAACAACAACAACAAGGATTCCAACAACACCCCCATTCCCTTACCCCACACTGCTCTCTTCCCTTTCATCCACGAATTCCGGGTTGACCTTGATGATTCTGCCATCCAGGAAGCCAGAAGTCTTAATGCCATTCGAACTGCTCTTGAGAATCTCGAAGATCAGCTCGAGTTTTTCCATACCGTTCAAGTGCAACAGCAGGTTGAGAGAGATGCTGCAATTGCACGACTAGAGCAAAGTAGGATTCTTCTTGCAATGAGATTGGCTGAACATCATGGCAAGAACTATAAAGTCATCAGTGAAGCTTTAGCGTTTGTTGGAGATGTACGTTATGCAGCTAACTATGTTTCACAAGAAAACAAAGATGGTCCAAAGTTTAGCCCGAATGGTCAGAAGCCATTGCCGAACAGTTCAAAGAGGTCTAATACTCTGATCAAGATGCTATTTTCAACCCTCGACTTTGCTAGGAAATCTCTCAAAATGGATCATGTGGGCGGGATACTTGGCAATGCTGCCATGGTTGCAATTAGCATGGTTGCATTTCTGCATCTCCACCAGGTAGCATATAAGGCGGCACCACTGGAGAGAGACGATATTCCTTTCAACAGAAACCTTCGAAGAACTTCTCGGCTCAAGGAATCTTCGTCAAATGAAGATTTCAGCAACTTTGACGTCTTATCCGCCAGGGGTTAG

Protein sequence

MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNKDSNNTPIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQKPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAAPLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG*

Homology

[Close]

BLAST of Cucsa.012860 vs. Swiss-Prot
Match: PDV1_ARATH (Plastid division protein PDV1 OS=Arabidopsis thaliana GN=PDV1 PE=1 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.1e-70
Identity = 148/274 (54.01%), Postives = 190/274 (69.34%), Query Frame = 1


Query: 4   DMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNKDSNNTPIPLPH 63
           +MEIEEIEAVLEKIWDLHDKLS+ IH IS+ HFL S K   +S+   N   N+     P 
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKRKNPHGNSGEDKRPG 62

Query: 64  TALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARL 123
              + FI  F VD +DS IQEA+SLNAIRTALENLEDQLEFFHT+  QQ+ E+D AIARL
Sbjct: 63  ---YVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARL 122

Query: 124 EQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQKPLPNS 183
           EQSRILLAMRLAEHHGKNY V+ EALAFVG ++  ++YVS ++      +P+G   +P+ 
Sbjct: 123 EQSRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGANSIPDG 182

Query: 184 SKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAAPLERD 243
            + SN +I    ST  FA+++L  +HV G+LGNAA+ AIS+VA LHLHQVA     L++ 
Sbjct: 183 IE-SNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKK 242

Query: 244 DIPFNRN-LRRTSRLKESSSNEDFSNFDVLSARG 277
           +  F R+  R+T    +SS++    + DV+ ARG
Sbjct: 243 EDRFYRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

[Close]

BLAST of Cucsa.012860 vs. TrEMBL
Match: A0A0A0LCS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357100 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 5.7e-151
Identity = 276/278 (99.28%), Postives = 276/278 (99.28%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSD--NNNNKDSNNTP 60
           MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSD  NNNNKDSNNTP
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNKDSNNTP 60

Query: 61  IPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120
           IPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA
Sbjct: 61  IPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120

Query: 121 AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK 180
           AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK
Sbjct: 121 AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK 180

Query: 181 PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAA 240
           PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAA
Sbjct: 181 PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAA 240

Query: 241 PLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 277
           PLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG
Sbjct: 241 PLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 278

[Close]

BLAST of Cucsa.012860 vs. TrEMBL
Match: A0A061G8R9_THECC (Plastid division protein PDV1 OS=Theobroma cacao GN=TCM_015337 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.9e-86
Identity = 176/277 (63.54%), Postives = 210/277 (75.81%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNKDSNNTPIP 60
           MKWDMEIEEIEAVLEKIWDLHDKLS+AIHSISR HFL S K LRKSD    K   N  + 
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSIKALRKSDK---KKLYNDAVG 60

Query: 61  LPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAI 120
             + A F F+ +FR+D  +SAIQEA+SLNAIRTALENLEDQLE FHTV  QQQ ERDAAI
Sbjct: 61  DDNRAGFVFVKDFRIDDSESAIQEAKSLNAIRTALENLEDQLEIFHTVHTQQQAERDAAI 120

Query: 121 ARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQKPL 180
           ARLEQSRI+LA+RLAEHHGK YKVI EALAFVGDV  A+++VS EN      SP+G+   
Sbjct: 121 ARLEQSRIILALRLAEHHGKKYKVIDEALAFVGDVHDASHFVSPENLYSTPVSPSGENLA 180

Query: 181 PNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAY-KAAP 240
            +  KRSN LIK+L S+L+FA+KSLK DH+GGIL NAA+ A+SM+A LHLHQ+AY + + 
Sbjct: 181 SHEGKRSNILIKVLVSSLNFAKKSLKFDHMGGILSNAALFAVSMIAMLHLHQIAYTEHSE 240

Query: 241 LERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 277
            + DDI   R +R+ S+L   SS +  ++ DV SARG
Sbjct: 241 KQEDDINRRRTVRKNSQLGGPSSYDCLNHLDVFSARG 274

[Close]

BLAST of Cucsa.012860 vs. TrEMBL
Match: E0CUK8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02390 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.6e-84
Identity = 177/281 (62.99%), Postives = 211/281 (75.09%), Query Frame = 1


Query: 5   MEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNN---NNKDSNNTPIPL 64
           MEIEEIEA+LEKIWDLHDKLS+AIHSISR HFL S K LRKSD +   N+ D N      
Sbjct: 1   MEIEEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKSDKSKPLNDVDENRFG--- 60

Query: 65  PHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIA 124
                F +  +FRV+ DD AIQEA+SLNAIRTALENLEDQLEFFHTVQV QQ ERDAAIA
Sbjct: 61  -----FVYAKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAERDAAIA 120

Query: 125 RLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQKPLP 184
           RLEQSRI+LA+RL+EHHGK YKVI EA+AFVGDVR A  +V  +N  GP  SP G+   P
Sbjct: 121 RLEQSRIVLAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPGKNVAP 180

Query: 185 NSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYK----- 244
           +  KRSN LIK+L S  +F +KSLK+DH+GGILGNAA+VA+SM+A LHL+QV YK     
Sbjct: 181 HEEKRSNFLIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYKDKIVL 240

Query: 245 AAPLERDD-IPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 277
             P +R+D I  NRN++RTSR++ SS + + +  DVL ARG
Sbjct: 241 EPPQKREDNIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 273

[Close]

BLAST of Cucsa.012860 vs. TrEMBL
Match: B9I535_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s01330g PE=4 SV=2)

HSP 1 Score: 317.4 bits (812), Expect = 1.7e-83
Identity = 170/286 (59.44%), Postives = 207/286 (72.38%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNKDSNN---- 60
           MKWDME+EEIEAVLEKIWDLHDKLS+AIHSISR HFL S K L+ +    NK  NN    
Sbjct: 1   MKWDMELEEIEAVLEKIWDLHDKLSDAIHSISRSHFLHSIKSLKTNTTTTNKKLNNENDV 60

Query: 61  -----TPIPLPHTALFPFIHEFRVDLDD-SAIQEARSLNAIRTALENLEDQLEFFHTVQV 120
                        + F F  +FRVD +D S IQEA+SLN+IRTALENLEDQLEFFHTVQ+
Sbjct: 61  GFEDNNSNSNNRASGFVFFKDFRVDGNDLSTIQEAKSLNSIRTALENLEDQLEFFHTVQI 120

Query: 121 QQQVERDAAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGP 180
            Q+ E DAAIARLEQSRI+LAMRLAEHHGK YKVI EALAFVGDV  A+ +VS EN  G 
Sbjct: 121 HQRAEIDAAIARLEQSRIILAMRLAEHHGKKYKVIEEALAFVGDVHDASQFVSPENLYGS 180

Query: 181 KFSPNGQKPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHL 240
             SP G+  +    KR NT+IK+L S+ +FA+KSLK+DHVGG+LGNAA+  +SM+A LHL
Sbjct: 181 PTSPLGENLIRREGKRPNTVIKVLLSSFEFAKKSLKLDHVGGLLGNAALFTVSMIAMLHL 240

Query: 241 HQVAYKAAPLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 277
           HQVA+   P +++D+  +RN ++   L+ SSSN    + DV+ ARG
Sbjct: 241 HQVAHNHHPYKQEDLYSDRNGKKAFGLEGSSSNGSLDHLDVMLARG 286

[Close]

BLAST of Cucsa.012860 vs. TrEMBL
Match: A9PED9_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 5.1e-83
Identity = 169/286 (59.09%), Postives = 207/286 (72.38%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNKDSNN---- 60
           MKWDME+EEIEAVLEKIWDLHDKLS+AIHSISR HFL S K L+ +    NK  NN    
Sbjct: 1   MKWDMELEEIEAVLEKIWDLHDKLSDAIHSISRSHFLHSIKSLKTNTTTTNKKLNNENDV 60

Query: 61  -----TPIPLPHTALFPFIHEFRVDLDD-SAIQEARSLNAIRTALENLEDQLEFFHTVQV 120
                        + F F  +FRVD +D S IQEA+SLN+IRTALENLEDQLEFFHTVQ+
Sbjct: 61  GFEDNNSNSNNRASGFVFFKDFRVDGNDLSTIQEAKSLNSIRTALENLEDQLEFFHTVQI 120

Query: 121 QQQVERDAAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGP 180
            Q+ E DAAIARLEQSRI+LAMRLAEHHGK YKVI EALAFVGDV  A+++VS EN  G 
Sbjct: 121 HQRAEIDAAIARLEQSRIILAMRLAEHHGKKYKVIEEALAFVGDVHDASHFVSPENLYGS 180

Query: 181 KFSPNGQKPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHL 240
             SP G+  +    KR NT+I +L S+ +FA+KSLK+DHVGG+LGNAA+  +SM+A LHL
Sbjct: 181 PTSPLGENLIRREGKRPNTVINVLLSSFEFAKKSLKLDHVGGLLGNAALFTVSMIAMLHL 240

Query: 241 HQVAYKAAPLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 277
           HQVA+   P +++D+  +RN ++   L+ SSSN    + DV+ ARG
Sbjct: 241 HQVAHNHHPYKQEDLYSDRNGKKAFGLEGSSSNGSLDHLDVMLARG 286

[Close]

BLAST of Cucsa.012860 vs. TAIR10
Match: AT5G53280.1 (AT5G53280.1 plastid division1)

HSP 1 Score: 268.1 bits (684), Expect = 6.1e-72
Identity = 148/274 (54.01%), Postives = 190/274 (69.34%), Query Frame = 1


Query: 4   DMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNKDSNNTPIPLPH 63
           +MEIEEIEAVLEKIWDLHDKLS+ IH IS+ HFL S K   +S+   N   N+     P 
Sbjct: 3   EMEIEEIEAVLEKIWDLHDKLSDEIHLISKSHFLKSVKPSNRSEKRKNPHGNSGEDKRPG 62

Query: 64  TALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAIARL 123
              + FI  F VD +DS IQEA+SLNAIRTALENLEDQLEFFHT+  QQ+ E+D AIARL
Sbjct: 63  ---YVFIKGFAVDDNDSTIQEAKSLNAIRTALENLEDQLEFFHTIHTQQRTEKDVAIARL 122

Query: 124 EQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQKPLPNS 183
           EQSRILLAMRLAEHHGKNY V+ EALAFVG ++  ++YVS ++      +P+G   +P+ 
Sbjct: 123 EQSRILLAMRLAEHHGKNYGVLEEALAFVGSIKSNSHYVSPDHLYDSSRNPDGANSIPDG 182

Query: 184 SKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAAPLERD 243
            + SN +I    ST  FA+++L  +HV G+LGNAA+ AIS+VA LHLHQVA     L++ 
Sbjct: 183 IE-SNFVINAFASTFGFAKRALGFNHVKGVLGNAAIFAISVVAMLHLHQVATSEHHLQKK 242

Query: 244 DIPFNRN-LRRTSRLKESSSNEDFSNFDVLSARG 277
           +  F R+  R+T    +SS++    + DV+ ARG
Sbjct: 243 EDRFYRSQQRKTYGRDKSSADRSLDHLDVMMARG 272

[Close]

BLAST of Cucsa.012860 vs. NCBI nr
Match: gi|449463466|ref|XP_004149455.1| (PREDICTED: plastid division protein PDV1 [Cucumis sativus])

HSP 1 Score: 541.6 bits (1394), Expect = 8.1e-151
Identity = 276/278 (99.28%), Postives = 276/278 (99.28%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSD--NNNNKDSNNTP 60
           MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSD  NNNNKDSNNTP
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNNNKDSNNTP 60

Query: 61  IPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120
           IPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA
Sbjct: 61  IPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120

Query: 121 AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK 180
           AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK
Sbjct: 121 AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK 180

Query: 181 PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAA 240
           PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAA
Sbjct: 181 PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAA 240

Query: 241 PLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 277
           PLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG
Sbjct: 241 PLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 278

[Close]

BLAST of Cucsa.012860 vs. NCBI nr
Match: gi|659077677|ref|XP_008439328.1| (PREDICTED: plastid division protein PDV1 [Cucumis melo])

HSP 1 Score: 523.5 bits (1347), Expect = 2.3e-145
Identity = 266/279 (95.34%), Postives = 270/279 (96.77%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSD---NNNNKDSNNT 60
           MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFL STKHLRKSD   NNNNKDSNN 
Sbjct: 32  MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLTSTKHLRKSDNNNNNNNKDSNNA 91

Query: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120
           PIPLPHTA+FPFI EFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD
Sbjct: 92  PIPLPHTAVFPFIDEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 151

Query: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180
           AAIARLEQSRI+LAMRLAEHHGKNYKVISEALAFVGDVRYAANYVS ENKDGPKFSP GQ
Sbjct: 152 AAIARLEQSRIVLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSHENKDGPKFSPKGQ 211

Query: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKA 240
           KPLPNSSKRSNTLIKMLFST+DFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYK 
Sbjct: 212 KPLPNSSKRSNTLIKMLFSTIDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKV 271

Query: 241 APLERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 277
           APLERDDIPF+RNLRRTSRLKESSSNEDFSNFDVLSARG
Sbjct: 272 APLERDDIPFDRNLRRTSRLKESSSNEDFSNFDVLSARG 310

[Close]

BLAST of Cucsa.012860 vs. NCBI nr
Match: gi|225462701|ref|XP_002266963.1| (PREDICTED: plastid division protein PDV1 [Vitis vinifera])

HSP 1 Score: 329.7 bits (844), Expect = 4.9e-87
Identity = 180/285 (63.16%), Postives = 215/285 (75.44%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNN---NNKDSNNT 60
           MKW+MEIEEIEA+LEKIWDLHDKLS+AIHSISR HFL S K LRKSD +   N+ D N  
Sbjct: 1   MKWEMEIEEIEAILEKIWDLHDKLSDAIHSISRFHFLNSIKSLRKSDKSKPLNDVDENRF 60

Query: 61  PIPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERD 120
                    F +  +FRV+ DD AIQEA+SLNAIRTALENLEDQLEFFHTVQV QQ ERD
Sbjct: 61  G--------FVYAKDFRVEDDDLAIQEAKSLNAIRTALENLEDQLEFFHTVQVHQQAERD 120

Query: 121 AAIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQ 180
           AAIARLEQSRI+LA+RL+EHHGK YKVI EA+AFVGDVR A  +V  +N  GP  SP G+
Sbjct: 121 AAIARLEQSRIVLAIRLSEHHGKKYKVIEEAMAFVGDVRDAGPFVLPDNLFGPPVSPPGK 180

Query: 181 KPLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYK- 240
              P+  KRSN LIK+L S  +F +KSLK+DH+GGILGNAA+VA+SM+A LHL+QV YK 
Sbjct: 181 NVAPHEEKRSNFLIKVLISCFNFGKKSLKLDHMGGILGNAALVAVSMLALLHLNQVTYKD 240

Query: 241 ----AAPLERDD-IPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 277
                 P +R+D I  NRN++RTSR++ SS + + +  DVL ARG
Sbjct: 241 KIVLEPPQKREDNIYRNRNVKRTSRVESSSLSSELNQLDVLYARG 277

[Close]

BLAST of Cucsa.012860 vs. NCBI nr
Match: gi|590673617|ref|XP_007038943.1| (Plastid division protein PDV1 [Theobroma cacao])

HSP 1 Score: 326.6 bits (836), Expect = 4.1e-86
Identity = 176/277 (63.54%), Postives = 210/277 (75.81%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNNNNKDSNNTPIP 60
           MKWDMEIEEIEAVLEKIWDLHDKLS+AIHSISR HFL S K LRKSD    K   N  + 
Sbjct: 1   MKWDMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSIKALRKSDK---KKLYNDAVG 60

Query: 61  LPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDAAI 120
             + A F F+ +FR+D  +SAIQEA+SLNAIRTALENLEDQLE FHTV  QQQ ERDAAI
Sbjct: 61  DDNRAGFVFVKDFRIDDSESAIQEAKSLNAIRTALENLEDQLEIFHTVHTQQQAERDAAI 120

Query: 121 ARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQKPL 180
           ARLEQSRI+LA+RLAEHHGK YKVI EALAFVGDV  A+++VS EN      SP+G+   
Sbjct: 121 ARLEQSRIILALRLAEHHGKKYKVIDEALAFVGDVHDASHFVSPENLYSTPVSPSGENLA 180

Query: 181 PNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAY-KAAP 240
            +  KRSN LIK+L S+L+FA+KSLK DH+GGIL NAA+ A+SM+A LHLHQ+AY + + 
Sbjct: 181 SHEGKRSNILIKVLVSSLNFAKKSLKFDHMGGILSNAALFAVSMIAMLHLHQIAYTEHSE 240

Query: 241 LERDDIPFNRNLRRTSRLKESSSNEDFSNFDVLSARG 277
            + DDI   R +R+ S+L   SS +  ++ DV SARG
Sbjct: 241 KQEDDINRRRTVRKNSQLGGPSSYDCLNHLDVFSARG 274

[Close]

BLAST of Cucsa.012860 vs. NCBI nr
Match: gi|802767779|ref|XP_012090124.1| (PREDICTED: plastid division protein PDV1 [Jatropha curcas])

HSP 1 Score: 323.2 bits (827), Expect = 4.5e-85
Identity = 173/279 (62.01%), Postives = 215/279 (77.06%), Query Frame = 1


Query: 1   MKWDMEIEEIEAVLEKIWDLHDKLSEAIHSISRDHFLASTKHLRKSDNN--NNKDSNNTP 60
           MKW+MEIEEIEAVLEKIWDLHDKLS+AIHSISR HFL S ++LRKSD    NN D  +T 
Sbjct: 1   MKWNMEIEEIEAVLEKIWDLHDKLSDAIHSISRAHFLNSVRNLRKSDKKKLNNDDVEDT- 60

Query: 61  IPLPHTALFPFIHEFRVDLDDSAIQEARSLNAIRTALENLEDQLEFFHTVQVQQQVERDA 120
                 + F F+ +FRVD +D AIQEA+SLNAIRTALENLEDQLEFFHTVQ+QQ+ ERDA
Sbjct: 61  -----RSGFVFVKDFRVDDNDFAIQEAKSLNAIRTALENLEDQLEFFHTVQIQQRAERDA 120

Query: 121 AIARLEQSRILLAMRLAEHHGKNYKVISEALAFVGDVRYAANYVSQENKDGPKFSPNGQK 180
           AIARLEQSRI+LAMRLAEHHGK YKV+ EALAFVGDV  A+++VS EN  G   +P+ QK
Sbjct: 121 AIARLEQSRIVLAMRLAEHHGKKYKVLEEALAFVGDVHDASDFVSPENLYGSSLNPSDQK 180

Query: 181 PLPNSSKRSNTLIKMLFSTLDFARKSLKMDHVGGILGNAAMVAISMVAFLHLHQVAYKAA 240
            L    + SN ++K+L S+ DF R SLK D +GG+LGNAA+ A+SM+A LHLHQVAYK  
Sbjct: 181 -LDRCDQGSNIVMKVLISSFDFVRTSLKWDQMGGMLGNAAVFAVSMLALLHLHQVAYKEH 240

Query: 241 PLERDDIPF-NRNLRRTSRLKESSSNEDFSNFDVLSARG 277
           P +++++ + NRN+ +  ++  SSSN + +  DV+ ARG
Sbjct: 241 PYKQEELIYRNRNVSKAPQIDGSSSNGNLNRLDVMLARG 272

The following BLAST results are available for this feature:

BLAST of Cucsa.012860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PDV1_ARATH	1.1e-70	54.01	Plastid division protein PDV1 OS=Arabidopsis thaliana GN=PDV1 PE=1 SV=1	[more]

BLAST of Cucsa.012860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCS6_CUCSA	5.7e-151	99.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G357100 PE=4 SV=1	[more]
A0A061G8R9_THECC	2.9e-86	63.54	Plastid division protein PDV1 OS=Theobroma cacao GN=TCM_015337 PE=4 SV=1	[more]
E0CUK8_VITVI	1.6e-84	62.99	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g02390 PE=4 SV=...	[more]
B9I535_POPTR	1.7e-83	59.44	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s01330g PE=4 SV=2	[more]
A9PED9_POPTR	5.1e-83	59.09	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]

BLAST of Cucsa.012860 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53280.1	6.1e-72	54.01	plastid division1	[more]

BLAST of Cucsa.012860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463466\|ref\|XP_004149455.1\|	8.1e-151	99.28	PREDICTED: plastid division protein PDV1 [Cucumis sativus]	[more]
gi\|659077677\|ref\|XP_008439328.1\|	2.3e-145	95.34	PREDICTED: plastid division protein PDV1 [Cucumis melo]	[more]
gi\|225462701\|ref\|XP_002266963.1\|	4.9e-87	63.16	PREDICTED: plastid division protein PDV1 [Vitis vinifera]	[more]
gi\|590673617\|ref\|XP_007038943.1\|	4.1e-86	63.54	Plastid division protein PDV1 [Theobroma cacao]	[more]
gi\|802767779\|ref\|XP_012090124.1\|	4.5e-85	62.01	PREDICTED: plastid division protein PDV1 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010020	chloroplast fission
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.012860.1	Cucsa.012860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33600	FAMILY NOT NAMED	coord: 6..265 score: 1.1E
None	No IPR available	PANTHER	PTHR33600:SF4	PLASTID DIVISION PROTEIN PDV1	coord: 6..265 score: 1.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.012860	Cla004224	Watermelon (97103) v1	cgywmB366
Cucsa.012860	Csa3G357100	Cucumber (Chinese Long) v2	cgycuB291
Cucsa.012860	MELO3C006974	Melon (DHL92) v3.5.1	cgymeB342
Cucsa.012860	ClCG05G008660	Watermelon (Charleston Gray)	cgywcgB344
Cucsa.012860	CSPI03G22120	Wild cucumber (PI 183967)	cgycpiB300
Cucsa.012860	CmaCh16G000770	Cucurbita maxima (Rimu)	cgycmaB0549
Cucsa.012860	CmaCh18G012950	Cucurbita maxima (Rimu)	cgycmaB0550
Cucsa.012860	CmoCh16G000800	Cucurbita moschata (Rifu)	cgycmoB0550
Cucsa.012860	CmoCh18G013240	Cucurbita moschata (Rifu)	cgycmoB0551
Cucsa.012860	Lsi05G000700	Bottle gourd (USVL1VR-Ls)	cgylsiB321
Cucsa.012860	Cp4.1LG09g00410	Cucurbita pepo (Zucchini)	cgycpeB0529
Cucsa.012860	Cp4.1LG14g06610	Cucurbita pepo (Zucchini)	cgycpeB0530
Cucsa.012860	MELO3C006974.2	Melon (DHL92) v3.6.1	cgymedB337
Cucsa.012860	CsaV3_3G021850	Cucumber (Chinese Long) v3	cgycucB303
Cucsa.012860	Cla97C05G090820	Watermelon (97103) v2	cgywmbB350
Cucsa.012860	Bhi01G001063	Wax gourd	cgywgoB392
Cucsa.012860	Carg20359	Silver-seed gourd	carcgyB0616
Cucsa.012860	Carg15087	Silver-seed gourd	carcgyB1106

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.012860	Wild cucumber (PI 183967)	cgycpiB299
Cucsa.012860	Cucumber (Chinese Long) v2	cgycuB290