Lsi02G014410 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi02G014410
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionLOB domain-containing protein 1
Locationchr02 : 20075036 .. 20078291 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATACATTGGTTTTGATTCCGATCAAGTCTCATCTCTCCGCTACTCTCTCCGCCTGTCTCTCTCCGGCTAAAATGGAGAAAAGTGAAGCAAATACGGCGGCGACCGCTGCTAGTCCGTGTGCGGCTTGCAAAATTCTCCGGCGGAGATGCCGAGAGAATTGCGAATTGGGGCCGTATTTTCCTCCAACGGAACCTCTCAAATTCACTATTGCTCATAAGGTCTTTGGTGCTAGCAACATCATCAAATTGCTTCAGGTAACTTCGATTCGTTTGATAACATTTTTGTTTCTCATTTATGGTTCCACGTTAAATAATTTCATATCTCTCGTATTATTTTTCAACATTTCATGTGTTTGCACGTGTATATGCAATTTCTTTTTTCTTTTAAGTAAATTTAAGGAAAACTACAAAAAAAAAAAAAAAAAATATATATATATATCAAACTATTTACAAAGTTTTAATATCTATCAGTAATAGACTGCGATAGAATTCTATTACTGAGCAATAAGTGACAGACCGCGATAGAATTCTATCACTTGAGCGATAGACTAATTATCGTTGTCTATTGCTTAGGCGATAGAATTTTATCGTAGTCTATTGTTGATAGTCAGTAAAATTTTTCGATATTTATAAATAATTTTGCTCACTTTTTTATATTTGAAAAAGTCCTAAATTTAATGATTTTATATACTTGGGAAGTGATAATGAAGTTTGAACATTTTTTATGATAAATTTATTTTTAAGTCAATCATTTTAGATATTTTGGGAGTGATAGTGAACTTTGAAGATTTTTTATGATATATTTATATTTATTTTTTAATGTTCAATATTTCACTTACTGAAAATGAGTTACACAATTTTAAAAATTATACCTAAATTTATGGAAGGGAGAACGATGGGAGTGTTTTCTTTGAAAATTAAACTCCTCTCCTACTTTAGAATAATTAAATTTTATTATTTAAATATATTGCTAAAAGTAATTATAAAAATTAGGTAAAAAAGAAAATGACAAAATGGAGAGAAGAAGTTCGTATTCGACTTCTATATTGCCTTTTATACAAAGATATCCGTGAGTGTCCCGATCAGCTTACGAGCACTTCGATTAATCTCTTTAATTCTATATCTTTCTTGTTATTAAATACACTCAAAAAATATGGATGCTTTTTTTACATCAAGATGCATGTTCAAATTTTTCACTCTCTTTTAATGATCGATCTTATTTTCAATTCTCTCTCGGTCTAGGATTATTGTTGGAAAACATTATTTCAACCTCCATTTTTCAATTTTAATTTCATCCTTTTATGTGTGGGTCCCTTTTTAATTAGGGGAAGTTTTAAAAATAGAAAAATAAGGAAAACTATTTACATAAAATAGCAAAATTTTTAAATAGTTTTGATAGACGCTGATAGAAGTCTATCACGATCTATAAGCGATAGAAATGATAGAAGTCTATCACGGATAGATGCTAATAGAAGTCTATCAATGTCTATCAATGTCTATCAGTATTTTTTTTGCTATTTTATGTAAATAGTTTGACATTTTTTTTATTTGTGAAAATTTCCCTTTTAATTATATAGAATTAAAAAGTGGAATAATGTGGGAATTTAAATGAGAGTATTATATTATACTATTAGATTCTCCCTTCCGCACGCATGCACGCGCACACACACGAGAAATTATTATAAACAAAAAAATATATCAAACTATATTTTTCTATATTTATATCGATAGAATTCAAGCTATCGTGGTCTATCACTGACAGAGAATAAAATTTTTTCTATATTTATAAATAGTTTTGCTCATTTTACTATATTTAAAAACCGTCCATATGTAATGTAATAAATTAATTTTTTTTTACAACTAAATAATGAACTATTAAAAGTTCAGTAAATTATTAAAGTTAGATATAGGAAGGTTTAGATTCTCAAGTTATGCGTGTGGATATGTCTTTGTCATAAAAGATGAAACTGAAAATTTTACAAGATTAGTCCTAAGATCATAATTTATTTAGTAATATTGTTGTTTTTAAAACTCATTATAATTATTTATTAGCTTCGAAACTTTATTATTAAAAAAACTTTTTACTAATCCTCATCTTTTGAAAAGACGATTAAGTATAAAACATATATTATTTTTTTAAAAAAAAAATGTCTTCATATTTTGAAAAAAACAAGAAAGTGCATTAAAATGCTAAAAAGAAAAACTGGCAGATCTGAATTTATGATCTTCCTAATATCTCGTATTATTGAATCTTTTAGGATCTTCCTAAGTCGCAAAGAGCTGATGCAGTGAACAGTATGGTATATGAGGCAAGTGCAAGAATAAGAGATCCGGTTTATGGATGTGCGGGCTCAATTTTCCAACTCCAAAAAGAAATAAATGACCTAAAAGCAGATTTAGCTAAAGCTCAAGCAGAGGTTCTCAAAATGCAATGTCAACAAGCCAATTTGATGACTCTAATTTGCAAGGAATTGTCTCAAATGCCACAACCACCAATAATAATGTATGATCATCAATCACTTAATGACAATTACAACATTGCTAGCCCTCAAACTTATCAAACCTATTCATACTTATTTGAGGACAGTAATATTTTGGAGCCTCTTTGGACTTAGATTACAATTAATGGTGGATTATTTGGTTTTTAATTTCAAAACTCAACAATAATGATAATAAATAGTATTTAGTTTAGTTTAGAATCAACGCTATAGATTGAGCGTTGAGATACATACTGCCTTTACAAAATTTCTTACTTTAATATATTTACAAGTGTCGAGATGCTTCAAATAGAAGCTCAACGCTACTCGCTTAGACATTTGACTTTAATAAACTTATTAGAACTTTTCGATACATCTCATTAGTTCTTTTTAATTTCTTTGAATTCTTGATTCATATCAGATGAATAGAAAAAATAGTCTGAAAAATCACAAAGGGCAACAATATTTTAGTTATAAAAGTAGCCTACAAATTGTACTATCAATTTCTACCTAAATCAATAAAATTATTAACTTCATGACACAAAAGTAGCAAACATTGATCCTCTGTTATGTGCATTTTATAGTGTTTTGGTTGGAAAAGTGATCAAAACTCAAATAATTATCTATTTTTTACATAGATTATAGTTTATTACAGACATAAGTTATGACATAAAAAAATAAATAAATAAACACACAAATTAAGGTGAATTAGAAACACAACATAAAATGTCGACACGTGCATAACTCAGCCCTTAATATATTTACTAATTTCCTTAATAG

mRNA sequence

ATACATTGGTTTTGATTCCGATCAAGTCTCATCTCTCCGCTACTCTCTCCGCCTGTCTCTCTCCGGCTAAAATGGAGAAAAGTGAAGCAAATACGGCGGCGACCGCTGCTAGTCCGTGTGCGGCTTGCAAAATTCTCCGGCGGAGATGCCGAGAGAATTGCGAATTGGGGCCGTATTTTCCTCCAACGGAACCTCTCAAATTCACTATTGCTCATAAGGTCTTTGGTGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCTAAGTCGCAAAGAGCTGATGCAGTGAACAGTATGGTATATGAGGCAAGTGCAAGAATAAGAGATCCGGTTTATGGATGTGCGGGCTCAATTTTCCAACTCCAAAAAGAAATAAATGACCTAAAAGCAGATTTAGCTAAAGCTCAAGCAGAGGTTCTCAAAATGCAATGTCAACAAGCCAATTTGATGACTCTAATTTGCAAGGAATTGTCTCAAATGCCACAACCACCAATAATAATGTATGATCATCAATCACTTAATGACAATTACAACATTGCTAGCCCTCAAACTTATCAAACCTATTCATACTTATTTGAGGACAGTAATATTTTGGAGCCTCTTTGGACTTAGATTACAATTAATGGTGGATTATTTGGTTTTTAATTTCAAAACTCAACAATAATGATAATAAATAGTATTTAGTTTAGTTTAGAATCAACGCTATAGATTGAGCGTTGAGATACATACTGCCTTTACAAAATTTCTTACTTTAATATATTTACAAGTGTCGAGATGCTTCAAATAGAAGCTCAACGCTACTCGCTTAGACATTTGACTTTAATAAACTTATTAGAACTTTTCGATACATCTCATTAGTTCTTTTTAATTTCTTTGAATTCTTGATTCATATCAGATGAATAGAAAAAATAGTCTGAAAAATCACAAAGGGCAACAATATTTTAGTTATAAAAGTAGCCTACAAATTGTACTATCAATTTCTACCTAAATCAATAAAATTATTAACTTCATGACACAAAAGTAGCAAACATTGATCCTCTGTTATGTGCATTTTATAGTGTTTTGGTTGGAAAAGTGATCAAAACTCAAATAATTATCTATTTTTTACATAGATTATAGTTTATTACAGACATAAGTTATGACATAAAAAAATAAATAAATAAACACACAAATTAAGGTGAATTAGAAACACAACATAAAATGTCGACACGTGCATAACTCAGCCCTTAATATATTTACTAATTTCCTTAATAG

Coding sequence (CDS)

ATGGAGAAAAGTGAAGCAAATACGGCGGCGACCGCTGCTAGTCCGTGTGCGGCTTGCAAAATTCTCCGGCGGAGATGCCGAGAGAATTGCGAATTGGGGCCGTATTTTCCTCCAACGGAACCTCTCAAATTCACTATTGCTCATAAGGTCTTTGGTGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCTAAGTCGCAAAGAGCTGATGCAGTGAACAGTATGGTATATGAGGCAAGTGCAAGAATAAGAGATCCGGTTTATGGATGTGCGGGCTCAATTTTCCAACTCCAAAAAGAAATAAATGACCTAAAAGCAGATTTAGCTAAAGCTCAAGCAGAGGTTCTCAAAATGCAATGTCAACAAGCCAATTTGATGACTCTAATTTGCAAGGAATTGTCTCAAATGCCACAACCACCAATAATAATGTATGATCATCAATCACTTAATGACAATTACAACATTGCTAGCCCTCAAACTTATCAAACCTATTCATACTTATTTGAGGACAGTAATATTTTGGAGCCTCTTTGGACTTAG

Protein sequence

MEKSEANTAATAASPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLPKSQRADAVNSMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQQANLMTLICKELSQMPQPPIIMYDHQSLNDNYNIASPQTYQTYSYLFEDSNILEPLWT
BLAST of Lsi02G014410 vs. Swiss-Prot
Match: LBD1_ARATH (LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.7e-45
Identity = 97/167 (58.08%), Postives = 118/167 (70.66%), Query Frame = 1

Query: 14  SPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLPKSQRADAVN 73
           SPCAACKILRRRC E C L PYFPPT+P KFTIAH+VFGASNIIK LQ+LP+SQR DAVN
Sbjct: 32  SPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 91

Query: 74  SMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQQANLMTLICKEL 133
           SMVYEA ARIRDPVYGCAG+I+ LQ+++++L+A LAKAQ E++ MQ Q++NL+ LI    
Sbjct: 92  SMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQRSNLLELIYNMD 151

Query: 134 SQMPQPPIIMYDHQSLNDN-YNIASPQTYQTYSYLFEDSNILEPLWT 180
            Q  Q      D+ S   N       ++    S L+ D     PLWT
Sbjct: 152 QQQKQE----QDNMSFESNDLGFLEDKSNTNSSMLWWD-----PLWT 189

BLAST of Lsi02G014410 vs. Swiss-Prot
Match: LBD11_ARATH (LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=2)

HSP 1 Score: 176.4 bits (446), Expect = 2.8e-43
Identity = 96/179 (53.63%), Postives = 120/179 (67.04%), Query Frame = 1

Query: 14  SPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLPKSQRADAVN 73
           SPCAACKILRRRC + C L PYFPPT+P KFTIAH+VFGASNIIK LQ+LP+SQR DAVN
Sbjct: 54  SPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 113

Query: 74  SMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQQANLMTLICK-- 133
           SMVYEA AR+RDPVYGCAG+I+ LQ+++++L+A LAK Q E++ MQ Q+++L+ LI    
Sbjct: 114 SMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELIYNME 173

Query: 134 --ELSQMPQPPIIMYDHQSLNDNYN-IASPQTYQTYSYLFEDSN--------ILEPLWT 180
             +LS   Q    M    S       I+SP          ED+N          +PLWT
Sbjct: 174 QTKLSVQEQGQQKMSFESSFESGDEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

BLAST of Lsi02G014410 vs. Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 1.6e-35
Identity = 68/109 (62.39%), Postives = 88/109 (80.73%), Query Frame = 1

Query: 13  ASPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLPKSQRADAV 72
           +SPCA+CK+LRRRC ++C   PYFPP +P KF I HKVFGASN+ K+LQ+LP  QRADAV
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 73  NSMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQ 122
           NS+V+EA+AR+RDPVYGC G+I  LQ +++ L+  LA AQAE+L +Q Q
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

BLAST of Lsi02G014410 vs. Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.6e-35
Identity = 71/119 (59.66%), Postives = 93/119 (78.15%), Query Frame = 1

Query: 5   EANTAATAASPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLP 64
           E++    AASPCAACK+LRRRC ++C   PYFP  EP KF   H+VFGASN+ K+LQ+LP
Sbjct: 3   ESSRKQGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELP 62

Query: 65  KSQRADAVNSMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQQA 124
             QR DAV+SMVYEA+AR+RDPVYGC G+I  LQ++I+ L+A LA AQAEV+ ++ +Q+
Sbjct: 63  IHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

BLAST of Lsi02G014410 vs. Swiss-Prot
Match: LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 3.4e-33
Identity = 67/123 (54.47%), Postives = 92/123 (74.80%), Query Frame = 1

Query: 14  SPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLPKSQRADAVN 73
           +PCAACK+LRRRC + C   PYF P EP KF   HKVFGASN+ K+L ++P+SQRADA N
Sbjct: 44  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAAN 103

Query: 74  SMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQQANLMTLICKEL 133
           S+VYEA+ R+RDPVYGC G+I  LQ+++  L+A+L   ++E+LK + ++A + TLI    
Sbjct: 104 SLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA-VATLIVPSN 163

Query: 134 SQM 137
           SQ+
Sbjct: 164 SQV 165

BLAST of Lsi02G014410 vs. TrEMBL
Match: A0A0A0LUS4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G088440 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 6.0e-77
Identity = 148/185 (80.00%), Postives = 165/185 (89.19%), Query Frame = 1

Query: 1   MEKS-EANTAATA-----ASPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGAS 60
           MEKS E NTA+TA     +SPCAACKILRRRCRENCELGPYFP  EPLKFTIAH+VFGAS
Sbjct: 1   MEKSAETNTASTAVVVGSSSPCAACKILRRRCRENCELGPYFPSMEPLKFTIAHRVFGAS 60

Query: 61  NIIKLLQDLPKSQRADAVNSMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAE 120
           NIIKLLQDLP+SQR DAVNSMVYEASARIRDP+YGCAGSIF LQ++INDL+ +LAKAQAE
Sbjct: 61  NIIKLLQDLPESQRGDAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQGELAKAQAE 120

Query: 121 VLKMQCQQANLMTLICKELSQMPQPPIIMYDHQSLNDNYNIASPQTYQTYSYLFEDSNIL 180
           VL+M CQQANLMTLI KEL Q+PQPP  M+DHQSLND YNIASPQ+Y +YSYLFE+ N+L
Sbjct: 121 VLRMHCQQANLMTLIWKELGQVPQPP--MHDHQSLNDPYNIASPQSYHSYSYLFEECNVL 180

BLAST of Lsi02G014410 vs. TrEMBL
Match: B9SK21_RICCO (LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_1399160 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 8.4e-55
Identity = 115/174 (66.09%), Postives = 136/174 (78.16%), Query Frame = 1

Query: 9   AATAASPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLPKSQR 68
           A    SPCAACKILRRRC + C L PYFPPTEP KFTIAH+VFGASNIIK LQ+LP+SQR
Sbjct: 34  APVILSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQR 93

Query: 69  ADAVNSMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQQANLMTL 128
           ADAV+SMVYEASARIRDPVYGCAG+I QLQK++N+L+A LAKAQAEV+ MQCQQANLM L
Sbjct: 94  ADAVSSMVYEASARIRDPVYGCAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLMAL 153

Query: 129 ICKELSQMPQPPIIMYDHQSLNDNYNIASPQTYQTYSYLFEDSNI---LEPLWT 180
           I  E++Q PQ        QS++D   I +PQ+YQ+     ++SN+    EPLWT
Sbjct: 154 IYMEMAQSPQ----QSSEQSIDD--FITTPQSYQSNPCFLDESNLGTMWEPLWT 201

BLAST of Lsi02G014410 vs. TrEMBL
Match: A0A061GTD1_THECC (LOB domain-containing protein 1 OS=Theobroma cacao GN=TCM_041094 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 8.4e-55
Identity = 115/177 (64.97%), Postives = 137/177 (77.40%), Query Frame = 1

Query: 7   NTAATAASPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLPKS 66
           +T     SPCAACKILRRRC + C L PYFPPTEP KFTIAH+VFGASNIIK LQ+LP+S
Sbjct: 47  STPPVVISPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPES 106

Query: 67  QRADAVNSMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQQANLM 126
           QRADAV+SMVYEASARIRDPVYGCAG+I QLQK++N+L+A LAKAQAEV+ MQ QQANL+
Sbjct: 107 QRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVNELQAQLAKAQAEVVNMQLQQANLV 166

Query: 127 TLICKELSQMPQPPIIMYDHQSLNDNYNIASPQTYQTYSYLFEDSNIL----EPLWT 180
            L+C E++Q PQP     + Q   D + I+SP +YQ+     ED+N L    EPLWT
Sbjct: 167 ALLCVEMAQSPQP-----NSQQSVDTF-ISSPPSYQSNPGFLEDNNNLGSLWEPLWT 217

BLAST of Lsi02G014410 vs. TrEMBL
Match: A0A067LHN9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05582 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.2e-54
Identity = 111/168 (66.07%), Postives = 137/168 (81.55%), Query Frame = 1

Query: 14  SPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLPKSQRADAVN 73
           SPCAACKILRRRC + C L PYFPPTEP KFTIAH+VFGASNIIK LQ+LP+SQRADAV+
Sbjct: 45  SPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVS 104

Query: 74  SMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQQANLMTLICK-- 133
           SMVYEASARIRDPVYGCAG+I  LQK+I++L+A LAKAQAE++ MQCQQANL+ ++C   
Sbjct: 105 SMVYEASARIRDPVYGCAGAICHLQKQISELQAQLAKAQAELVNMQCQQANLVAILCNCM 164

Query: 134 ELSQMPQPPIIMYDHQSLNDNYNIASPQTYQTYSYLFEDSNILEPLWT 180
           E++Q PQ        QS+ DN+ I++PQ+YQ+     ++SN+ EPLWT
Sbjct: 165 EMAQSPQQS----SEQSV-DNF-ISTPQSYQSNPCFIDESNLWEPLWT 206

BLAST of Lsi02G014410 vs. TrEMBL
Match: A0A0D2LY54_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G129700 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.2e-54
Identity = 112/175 (64.00%), Postives = 135/175 (77.14%), Query Frame = 1

Query: 8   TAATAASPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLPKSQ 67
           + +   SPCAACKILRRRC E C L PYFPPTEP KFTIAH+VFGASNIIK LQ+LP+SQ
Sbjct: 112 STSVVISPCAACKILRRRCAEKCVLAPYFPPTEPTKFTIAHRVFGASNIIKFLQELPESQ 171

Query: 68  RADAVNSMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQQANLMT 127
           RADAV+SMVYEASARIRDPVYGC G+I QLQK++N+L+A LAKAQAEV+ MQ QQANL+ 
Sbjct: 172 RADAVSSMVYEASARIRDPVYGCTGAICQLQKQVNELQAQLAKAQAEVVNMQLQQANLVA 231

Query: 128 LICKELSQMPQPPIIMYDHQSLNDNYNIASPQTYQTYSYLFEDSNI---LEPLWT 180
           L+C E++Q PQ       HQ +ND +   SPQ+Y +     +D+N+    EPLWT
Sbjct: 232 LLCMEVAQSPQ----QNPHQPIND-FLSNSPQSYHSNPSFLDDNNLGSSWEPLWT 281

BLAST of Lsi02G014410 vs. TAIR10
Match: AT1G07900.1 (AT1G07900.1 LOB domain-containing protein 1)

HSP 1 Score: 183.7 bits (465), Expect = 9.8e-47
Identity = 97/167 (58.08%), Postives = 118/167 (70.66%), Query Frame = 1

Query: 14  SPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLPKSQRADAVN 73
           SPCAACKILRRRC E C L PYFPPT+P KFTIAH+VFGASNIIK LQ+LP+SQR DAVN
Sbjct: 32  SPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 91

Query: 74  SMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQQANLMTLICKEL 133
           SMVYEA ARIRDPVYGCAG+I+ LQ+++++L+A LAKAQ E++ MQ Q++NL+ LI    
Sbjct: 92  SMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQRSNLLELIYNMD 151

Query: 134 SQMPQPPIIMYDHQSLNDN-YNIASPQTYQTYSYLFEDSNILEPLWT 180
            Q  Q      D+ S   N       ++    S L+ D     PLWT
Sbjct: 152 QQQKQE----QDNMSFESNDLGFLEDKSNTNSSMLWWD-----PLWT 189

BLAST of Lsi02G014410 vs. TAIR10
Match: AT2G28500.1 (AT2G28500.1 LOB domain-containing protein 11)

HSP 1 Score: 176.4 bits (446), Expect = 1.6e-44
Identity = 96/179 (53.63%), Postives = 120/179 (67.04%), Query Frame = 1

Query: 14  SPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLPKSQRADAVN 73
           SPCAACKILRRRC + C L PYFPPT+P KFTIAH+VFGASNIIK LQ+LP+SQR DAVN
Sbjct: 54  SPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVN 113

Query: 74  SMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQQANLMTLICK-- 133
           SMVYEA AR+RDPVYGCAG+I+ LQ+++++L+A LAK Q E++ MQ Q+++L+ LI    
Sbjct: 114 SMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELIYNME 173

Query: 134 --ELSQMPQPPIIMYDHQSLNDNYN-IASPQTYQTYSYLFEDSN--------ILEPLWT 180
             +LS   Q    M    S       I+SP          ED+N          +PLWT
Sbjct: 174 QTKLSVQEQGQQKMSFESSFESGDEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

BLAST of Lsi02G014410 vs. TAIR10
Match: AT2G30130.1 (AT2G30130.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 150.6 bits (379), Expect = 9.2e-37
Identity = 68/109 (62.39%), Postives = 88/109 (80.73%), Query Frame = 1

Query: 13  ASPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLPKSQRADAV 72
           +SPCA+CK+LRRRC ++C   PYFPP +P KF I HKVFGASN+ K+LQ+LP  QRADAV
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 73  NSMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQ 122
           NS+V+EA+AR+RDPVYGC G+I  LQ +++ L+  LA AQAE+L +Q Q
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

BLAST of Lsi02G014410 vs. TAIR10
Match: AT1G31320.1 (AT1G31320.1 LOB domain-containing protein 4)

HSP 1 Score: 149.4 bits (376), Expect = 2.0e-36
Identity = 71/119 (59.66%), Postives = 93/119 (78.15%), Query Frame = 1

Query: 5   EANTAATAASPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLP 64
           E++    AASPCAACK+LRRRC ++C   PYFP  EP KF   H+VFGASN+ K+LQ+LP
Sbjct: 3   ESSRKQGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELP 62

Query: 65  KSQRADAVNSMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQQA 124
             QR DAV+SMVYEA+AR+RDPVYGC G+I  LQ++I+ L+A LA AQAEV+ ++ +Q+
Sbjct: 63  IHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

BLAST of Lsi02G014410 vs. TAIR10
Match: AT2G40470.1 (AT2G40470.1 LOB domain-containing protein 15)

HSP 1 Score: 142.9 bits (359), Expect = 1.9e-34
Identity = 67/123 (54.47%), Postives = 92/123 (74.80%), Query Frame = 1

Query: 14  SPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLPKSQRADAVN 73
           +PCAACK+LRRRC + C   PYF P EP KF   HKVFGASN+ K+L ++P+SQRADA N
Sbjct: 44  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAAN 103

Query: 74  SMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQQANLMTLICKEL 133
           S+VYEA+ R+RDPVYGC G+I  LQ+++  L+A+L   ++E+LK + ++A + TLI    
Sbjct: 104 SLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA-VATLIVPSN 163

Query: 134 SQM 137
           SQ+
Sbjct: 164 SQV 165

BLAST of Lsi02G014410 vs. NCBI nr
Match: gi|449459128|ref|XP_004147298.1| (PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 295.0 bits (754), Expect = 8.6e-77
Identity = 148/185 (80.00%), Postives = 165/185 (89.19%), Query Frame = 1

Query: 1   MEKS-EANTAATA-----ASPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGAS 60
           MEKS E NTA+TA     +SPCAACKILRRRCRENCELGPYFP  EPLKFTIAH+VFGAS
Sbjct: 1   MEKSAETNTASTAVVVGSSSPCAACKILRRRCRENCELGPYFPSMEPLKFTIAHRVFGAS 60

Query: 61  NIIKLLQDLPKSQRADAVNSMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAE 120
           NIIKLLQDLP+SQR DAVNSMVYEASARIRDP+YGCAGSIF LQ++INDL+ +LAKAQAE
Sbjct: 61  NIIKLLQDLPESQRGDAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQGELAKAQAE 120

Query: 121 VLKMQCQQANLMTLICKELSQMPQPPIIMYDHQSLNDNYNIASPQTYQTYSYLFEDSNIL 180
           VL+M CQQANLMTLI KEL Q+PQPP  M+DHQSLND YNIASPQ+Y +YSYLFE+ N+L
Sbjct: 121 VLRMHCQQANLMTLIWKELGQVPQPP--MHDHQSLNDPYNIASPQSYHSYSYLFEECNVL 180

BLAST of Lsi02G014410 vs. NCBI nr
Match: gi|659072136|ref|XP_008463578.1| (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 284.6 bits (727), Expect = 1.2e-73
Identity = 143/185 (77.30%), Postives = 161/185 (87.03%), Query Frame = 1

Query: 1   MEKSE-ANTAAT-----AASPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGAS 60
           M+KSE ANTA+      +  PCAACKILRRRCRENCELGPYFPP EPLKFTIAH+VFGAS
Sbjct: 1   MKKSEEANTASAVVVMGSTQPCAACKILRRRCRENCELGPYFPPMEPLKFTIAHRVFGAS 60

Query: 61  NIIKLLQDLPKSQRADAVNSMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAE 120
           NIIKLLQ+LPKSQRADAVNSMVYEASARIRDP+YGCAGSIF LQ++INDL+ +LAKAQAE
Sbjct: 61  NIIKLLQNLPKSQRADAVNSMVYEASARIRDPIYGCAGSIFHLQRQINDLQIELAKAQAE 120

Query: 121 VLKMQCQQANLMTLICKELSQMPQPPIIMYDHQSLNDNYNIASPQTYQTYSYLFEDSNIL 180
           VL+M CQQANLMTLICKEL QMP+PP        ++D+YNIASPQ Y +YSYLFE+SN+L
Sbjct: 121 VLRMHCQQANLMTLICKELGQMPEPP--------MHDHYNIASPQGYYSYSYLFEESNVL 177

BLAST of Lsi02G014410 vs. NCBI nr
Match: gi|659072131|ref|XP_008463550.1| (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 248.8 bits (634), Expect = 7.0e-63
Identity = 120/174 (68.97%), Postives = 146/174 (83.91%), Query Frame = 1

Query: 9   AATAASPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLPKSQR 68
           A    SPCAACKILRRRC E C L PYFPP++PLKFTIAH++FGASNIIKLL DLP SQR
Sbjct: 31  APVVVSPCAACKILRRRCAEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQR 90

Query: 69  ADAVNSMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQQANLMTL 128
           ADAV+S+VYEASARIRDPVYGCAG+I QLQK+IN+L+A+LAK QAE++ + C Q NL+ L
Sbjct: 91  ADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVAL 150

Query: 129 ICKELSQMPQPP---IIMYDHQSLNDNYNIASPQTYQTYSYLFEDSNILEPLWT 180
           ICKEL+Q P P     ++ DH+SL++N+NIA+PQ+YQ Y+ LFEDSNI +PLWT
Sbjct: 151 ICKELAQTPPPMSSLSLLPDHRSLDNNFNIATPQSYQGYTSLFEDSNIWDPLWT 204

BLAST of Lsi02G014410 vs. NCBI nr
Match: gi|449459130|ref|XP_004147299.1| (PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 6.2e-59
Identity = 115/175 (65.71%), Postives = 145/175 (82.86%), Query Frame = 1

Query: 9   AATAASPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLPKSQR 68
           A    +PCAACKILRRRC + C L PYFPP++PLKFTIAH++FGASNIIKLL DLP SQR
Sbjct: 34  AHVVVTPCAACKILRRRCTQKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQR 93

Query: 69  ADAVNSMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQQANLMTL 128
           ADAV+S+VYEASARIRDPVYGCAG+I QLQK+IN+L+A+LAK QAE++ + C Q NL+ L
Sbjct: 94  ADAVSSLVYEASARIRDPVYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVAL 153

Query: 129 ICKELSQMPQP---PIIMYDHQSLNDNYNI-ASPQTYQTYSYLFEDSNILEPLWT 180
           ICKEL+Q P P     ++ +H+SL++++NI A+PQ+YQ Y+ LF DSNI +PLWT
Sbjct: 154 ICKELAQTPPPMSSSSLLPEHRSLDNSFNIVATPQSYQGYTSLFGDSNIWDPLWT 208

BLAST of Lsi02G014410 vs. NCBI nr
Match: gi|720090050|ref|XP_010244970.1| (PREDICTED: LOB domain-containing protein 1-like [Nelumbo nucifera])

HSP 1 Score: 228.4 bits (581), Expect = 9.8e-57
Identity = 114/170 (67.06%), Postives = 136/170 (80.00%), Query Frame = 1

Query: 14  SPCAACKILRRRCRENCELGPYFPPTEPLKFTIAHKVFGASNIIKLLQDLPKSQRADAVN 73
           SPCAACKILRRRC E C L PYFPPTEPLKFT AH+VFGASNIIK LQ+LP+SQRADAV+
Sbjct: 40  SPCAACKILRRRCVEKCVLAPYFPPTEPLKFTTAHRVFGASNIIKFLQELPESQRADAVS 99

Query: 74  SMVYEASARIRDPVYGCAGSIFQLQKEINDLKADLAKAQAEVLKMQCQQANLMTLICKEL 133
           SMVYEA+ARIRDPVYGCAG+I QLQK++N+L+A LAKAQAE++ MQCQQANL+ LIC E+
Sbjct: 100 SMVYEANARIRDPVYGCAGAICQLQKQVNELQAQLAKAQAELVNMQCQQANLLALICMEM 159

Query: 134 SQMPQPPIIMYDHQSLNDNYNIASPQTYQTYSYLFEDSNIL----EPLWT 180
           +Q  Q P++    Q   DN+ I SP ++QT + +F D   L    EPLWT
Sbjct: 160 AQSQQAPLL---QQQPFDNFMITSPHSFQTSNGIFTDDTSLGSTWEPLWT 206

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
LBD1_ARATH1.7e-4558.08LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1[more]
LBD11_ARATH2.8e-4353.63LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=2[more]
LBD12_ARATH1.6e-3562.39LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2[more]
LBD4_ARATH3.6e-3559.66LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1[more]
LBD15_ARATH3.4e-3354.47LOB domain-containing protein 15 OS=Arabidopsis thaliana GN=LBD15 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0LUS4_CUCSA6.0e-7780.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G088440 PE=4 SV=1[more]
B9SK21_RICCO8.4e-5566.09LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_1399160 PE=4... [more]
A0A061GTD1_THECC8.4e-5564.97LOB domain-containing protein 1 OS=Theobroma cacao GN=TCM_041094 PE=4 SV=1[more]
A0A067LHN9_JATCU3.2e-5466.07Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05582 PE=4 SV=1[more]
A0A0D2LY54_GOSRA4.2e-5464.00Uncharacterized protein OS=Gossypium raimondii GN=B456_001G129700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G07900.19.8e-4758.08 LOB domain-containing protein 1[more]
AT2G28500.11.6e-4453.63 LOB domain-containing protein 11[more]
AT2G30130.19.2e-3762.39 Lateral organ boundaries (LOB) domain family protein[more]
AT1G31320.12.0e-3659.66 LOB domain-containing protein 4[more]
AT2G40470.11.9e-3454.47 LOB domain-containing protein 15[more]
Match NameE-valueIdentityDescription
gi|449459128|ref|XP_004147298.1|8.6e-7780.00PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus][more]
gi|659072136|ref|XP_008463578.1|1.2e-7377.30PREDICTED: LOB domain-containing protein 1-like [Cucumis melo][more]
gi|659072131|ref|XP_008463550.1|7.0e-6368.97PREDICTED: LOB domain-containing protein 1-like [Cucumis melo][more]
gi|449459130|ref|XP_004147299.1|6.2e-5965.71PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus][more]
gi|720090050|ref|XP_010244970.1|9.8e-5767.06PREDICTED: LOB domain-containing protein 1-like [Nelumbo nucifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G014410.1Lsi02G014410.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 15..112
score: 4.7
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 14..115
score: 2
NoneNo IPR availableunknownCoilCoilcoord: 94..121
scor
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 14..178
score: 9.4
NoneNo IPR availablePANTHERPTHR31301:SF14LOB DOMAIN-CONTAINING PROTEIN 1-RELATEDcoord: 14..178
score: 9.4

The following gene(s) are paralogous to this gene:

None