Cp4.1LG20g09100 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATATCTCTGTCTTCTTTCTCTCTCTACTGAGTCTAAAATGGACGCAAAATCCAGCCCAACTTCAACCATCTTCCGTTCTCAGTCGCCGTCGTCGTCCCCATTACCGCCGCCTCCGAGTGTTCAGGCCGGCTTGGTGGTCAGTCCGTGTGCTGCGTGCAAGACTCTGAGGCGGAGATGCACAGAGAAATGCGTATTGGCGCCCTATTTCCCTCCCTCTGATCCTCTCAAGTTTACCATTGCTCACCGTATCTTCGGCGCTAGCAACATCATCAAATTGCTTCAGGTACCTCATCAGCCCCTAATTTCCTACTTTTTCTCGAGTTTTCGTGTTATCACTCTGTTCTTAGTTGTTGAAATTGTGAATTTCGATGTGGAAATTGAAATTTGTTCTTGGAATCGTTACGAAATCGTTGAATTACCGAACGATTTTAGGGAAGGAAAAAAATACTGTTGACAGGAATAGTTTGGTCAATGCGTATGCGTTCCGAGCAAAAGAACAAAATGGAATTAGTAGTGAAATTGATCTTTCCTTTCCTTTCTATATAATCGAGCGAATCGTAATCGAGTAGAACTGTGTGTTTTTGGAGGCGGCTTAGTGCCGTAGGTGACTTGGTGTACAGGCAATGAACATAGTTAGGGCTCACATATACAACGATGTCCCTATTTTGCCCGTAAATCTGAAAAATTACGCAATCCAAATCTGTAACGATGTTCATATTTTGCTTGTAAATCTGAAAAATTACGCAATCCAAATCTATTTGTTTGTTTGTGTTGGCTCAATGGCCATGTGGAGCAATTATAATCAAACAATCAAACAAAGCAGCTCTTCTGTTTGATTTTTGTCCTCAAAGAACAGCCAATCATATAACAATCTGTTCTTCCACAATTCAAATCACCACAAACCAAACACTTCCTGATATCAATCACCTTATTGAATTCTTCAGGATCTTCCTGAATCACAGAGAATTGATGCAGTGAGTAGCTTGGTATACGAAGCAAGCGCAAGAATCAGAGATCCAGTATATGGATGTGCAGGGGCCATTTCCCAGCTCCAAAAACAAATAAACGAACTGCAAGCAGAGCTAGCCAAAACACAGGCTGAGCTTGTCAACATCCACAGCCACCAAACAAATTTGGTGGCTCTAATTTGCAAGGAACTAGCTCAAACACCACCACCGGTGTCGCCCCCGGACCACCTCGCACTCGACAACAATCTCAACACTGCCACTCCTCAGAGCTACACAAATTTGTTTGAAGATAGCAGTATTTGGGAGCCTCTTTGGACATGATTAGACCTGAAAAGGTTGTGGGAAGTCAAAGATGGAGTAGAATATATGAAAGTTGAGTAGTTGAATATTGGGTAATATTAGGCAGTTGTTAGGTTAGATGGGTTCCTCATTTGCTCCCTCATAACCAAGAAAAGTGGAGTGAAGAAGAAAAAGGATGATGTTTACTACACTAGATTAGTGCAAAAGTATTAAGTCTTAGTGTGTGTGTATATATATATCCTTAGATATCTTTGTCAAAGTTCCTTTACTTCAAGTGGTGTCAATTGTGTTGCTTCCCTCCTTTGAAAATGACCACAAATGTCCTCTTGCTATGATCTCGGGCTCAACAACTCGTGGGTTGTGTGAATTTACACATCTAACATTTTGATCGATGATATAGTATTTGA CATATCTCTGTCTTCTTTCTCTCTCTACTGAGTCTAAAATGGACGCAAAATCCAGCCCAACTTCAACCATCTTCCGTTCTCAGTCGCCGTCGTCGTCCCCATTACCGCCGCCTCCGAGTGTTCAGGCCGGCTTGGTGGTCAGTCCGTGTGCTGCGTGCAAGACTCTGAGGCGGAGATGCACAGAGAAATGCGTATTGGCGCCCTATTTCCCTCCCTCTGATCCTCTCAAGTTTACCATTGCTCACCGTATCTTCGGCGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCTGAATCACAGAGAATTGATGCAGTGAGTAGCTTGGTATACGAAGCAAGCGCAAGAATCAGAGATCCAGTATATGGATGTGCAGGGGCCATTTCCCAGCTCCAAAAACAAATAAACGAACTGCAAGCAGAGCTAGCCAAAACACAGGCTGAGCTTGTCAACATCCACAGCCACCAAACAAATTTGGTGGCTCTAATTTGCAAGGAACTAGCTCAAACACCACCACCGGTGTCGCCCCCGGACCACCTCGCACTCGACAACAATCTCAACACTGCCACTCCTCAGAGCTACACAAATTTGTTTGAAGATAGCAGTATTTGGGAGCCTCTTTGGACATGATTAGACCTGAAAAGGTTGTGGGAAGTCAAAGATGGAGTAGAATATATGAAAGTTGAGTAGTTGAATATTGGGTAATATTAGGCAGTTGTTAGGTTAGATGGGTTCCTCATTTGCTCCCTCATAACCAAGAAAAGTGGAGTGAAGAAGAAAAAGGATGATGTTTACTACACTAGATTAGTGCAAAAGTATTAAGTCTTAGTGTGTGTGTATATATATATCCTTAGATATCTTTGTCAAAGTTCCTTTACTTCAAGTGGTGTCAATTGTGTTGCTTCCCTCCTTTGAAAATGACCACAAATGTCCTCTTGCTATGATCTCGGGCTCAACAACTCGTGGGTTGTGTGAATTTACACATCTAACATTTTGATCGATGATATAGTATTTGA ATGGACGCAAAATCCAGCCCAACTTCAACCATCTTCCGTTCTCAGTCGCCGTCGTCGTCCCCATTACCGCCGCCTCCGAGTGTTCAGGCCGGCTTGGTGGTCAGTCCGTGTGCTGCGTGCAAGACTCTGAGGCGGAGATGCACAGAGAAATGCGTATTGGCGCCCTATTTCCCTCCCTCTGATCCTCTCAAGTTTACCATTGCTCACCGTATCTTCGGCGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCTGAATCACAGAGAATTGATGCAGTGAGTAGCTTGGTATACGAAGCAAGCGCAAGAATCAGAGATCCAGTATATGGATGTGCAGGGGCCATTTCCCAGCTCCAAAAACAAATAAACGAACTGCAAGCAGAGCTAGCCAAAACACAGGCTGAGCTTGTCAACATCCACAGCCACCAAACAAATTTGGTGGCTCTAATTTGCAAGGAACTAGCTCAAACACCACCACCGGTGTCGCCCCCGGACCACCTCGCACTCGACAACAATCTCAACACTGCCACTCCTCAGAGCTACACAAATTTGTTTGAAGATAGCAGTATTTGGGAGCCTCTTTGGACATGA MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQKQINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLNTATPQSYTNLFEDSSIWEPLWT
BLAST of Cp4.1LG20g09100 vs. Swiss-Prot
Match: LBD1_ARATH (LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 1.5e-50 Identity = 111/197 (56.35%), Postives = 139/197 (70.56%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. Swiss-Prot
Match: LBD11_ARATH (LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=2) HSP 1 Score: 199.1 bits (505), Expect = 4.4e-50 Identity = 116/216 (53.70%), Postives = 149/216 (68.98%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2) HSP 1 Score: 152.9 bits (385), Expect = 3.6e-36 Identity = 82/162 (50.62%), Postives = 104/162 (64.20%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 6.1e-36 Identity = 82/169 (48.52%), Postives = 113/169 (66.86%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. Swiss-Prot
Match: LBD3_ARATH (LOB domain-containing protein 3 OS=Arabidopsis thaliana GN=LBD3 PE=2 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 4.9e-33 Identity = 67/112 (59.82%), Postives = 84/112 (75.00%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. TrEMBL
Match: A0A0A0LS55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G088450 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 6.3e-64 Identity = 131/157 (83.44%), Postives = 139/157 (88.54%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. TrEMBL
Match: M5W070_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011528mg PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 1.6e-59 Identity = 130/209 (62.20%), Postives = 154/209 (73.68%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. TrEMBL
Match: A0A061GTD1_THECC (LOB domain-containing protein 1 OS=Theobroma cacao GN=TCM_041094 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 2.1e-59 Identity = 127/199 (63.82%), Postives = 153/199 (76.88%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. TrEMBL
Match: A0A0L9V6W4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g155500 PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 4.7e-59 Identity = 127/200 (63.50%), Postives = 151/200 (75.50%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. TrEMBL
Match: A0A0S3SCU3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G190300 PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 4.7e-59 Identity = 127/200 (63.50%), Postives = 151/200 (75.50%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. TAIR10
Match: AT1G07900.1 (AT1G07900.1 LOB domain-containing protein 1) HSP 1 Score: 200.7 bits (509), Expect = 8.5e-52 Identity = 111/197 (56.35%), Postives = 139/197 (70.56%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. TAIR10
Match: AT2G28500.1 (AT2G28500.1 LOB domain-containing protein 11) HSP 1 Score: 199.1 bits (505), Expect = 2.5e-51 Identity = 116/216 (53.70%), Postives = 149/216 (68.98%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. TAIR10
Match: AT2G30130.1 (AT2G30130.1 Lateral organ boundaries (LOB) domain family protein) HSP 1 Score: 152.9 bits (385), Expect = 2.0e-37 Identity = 82/162 (50.62%), Postives = 104/162 (64.20%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. TAIR10
Match: AT1G31320.1 (AT1G31320.1 LOB domain-containing protein 4) HSP 1 Score: 152.1 bits (383), Expect = 3.5e-37 Identity = 82/169 (48.52%), Postives = 113/169 (66.86%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. TAIR10
Match: AT1G16530.1 (AT1G16530.1 ASYMMETRIC LEAVES 2-like 9) HSP 1 Score: 142.5 bits (358), Expect = 2.7e-34 Identity = 67/112 (59.82%), Postives = 84/112 (75.00%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. NCBI nr
Match: gi|659072131|ref|XP_008463550.1| (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo]) HSP 1 Score: 317.0 bits (811), Expect = 2.3e-83 Identity = 168/202 (83.17%), Postives = 178/202 (88.12%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. NCBI nr
Match: gi|449459130|ref|XP_004147299.1| (PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus]) HSP 1 Score: 312.4 bits (799), Expect = 5.7e-82 Identity = 165/204 (80.88%), Postives = 178/204 (87.25%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. NCBI nr
Match: gi|700209659|gb|KGN64755.1| (hypothetical protein Csa_1G088450 [Cucumis sativus]) HSP 1 Score: 251.9 bits (642), Expect = 9.1e-64 Identity = 131/157 (83.44%), Postives = 139/157 (88.54%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. NCBI nr
Match: gi|645217187|ref|XP_008224697.1| (PREDICTED: LOB domain-containing protein 1-like [Prunus mume]) HSP 1 Score: 237.7 bits (605), Expect = 1.8e-59 Identity = 130/209 (62.20%), Postives = 154/209 (73.68%), Query Frame = 1
BLAST of Cp4.1LG20g09100 vs. NCBI nr
Match: gi|595829650|ref|XP_007205910.1| (hypothetical protein PRUPE_ppa011528mg [Prunus persica]) HSP 1 Score: 237.3 bits (604), Expect = 2.3e-59 Identity = 130/209 (62.20%), Postives = 154/209 (73.68%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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