Cp4.1LG20g09100 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG20g09100
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLOB domain-containing protein, putative
LocationCp4.1LG20 : 6701146 .. 6702821 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATATCTCTGTCTTCTTTCTCTCTCTACTGAGTCTAAAATGGACGCAAAATCCAGCCCAACTTCAACCATCTTCCGTTCTCAGTCGCCGTCGTCGTCCCCATTACCGCCGCCTCCGAGTGTTCAGGCCGGCTTGGTGGTCAGTCCGTGTGCTGCGTGCAAGACTCTGAGGCGGAGATGCACAGAGAAATGCGTATTGGCGCCCTATTTCCCTCCCTCTGATCCTCTCAAGTTTACCATTGCTCACCGTATCTTCGGCGCTAGCAACATCATCAAATTGCTTCAGGTACCTCATCAGCCCCTAATTTCCTACTTTTTCTCGAGTTTTCGTGTTATCACTCTGTTCTTAGTTGTTGAAATTGTGAATTTCGATGTGGAAATTGAAATTTGTTCTTGGAATCGTTACGAAATCGTTGAATTACCGAACGATTTTAGGGAAGGAAAAAAATACTGTTGACAGGAATAGTTTGGTCAATGCGTATGCGTTCCGAGCAAAAGAACAAAATGGAATTAGTAGTGAAATTGATCTTTCCTTTCCTTTCTATATAATCGAGCGAATCGTAATCGAGTAGAACTGTGTGTTTTTGGAGGCGGCTTAGTGCCGTAGGTGACTTGGTGTACAGGCAATGAACATAGTTAGGGCTCACATATACAACGATGTCCCTATTTTGCCCGTAAATCTGAAAAATTACGCAATCCAAATCTGTAACGATGTTCATATTTTGCTTGTAAATCTGAAAAATTACGCAATCCAAATCTATTTGTTTGTTTGTGTTGGCTCAATGGCCATGTGGAGCAATTATAATCAAACAATCAAACAAAGCAGCTCTTCTGTTTGATTTTTGTCCTCAAAGAACAGCCAATCATATAACAATCTGTTCTTCCACAATTCAAATCACCACAAACCAAACACTTCCTGATATCAATCACCTTATTGAATTCTTCAGGATCTTCCTGAATCACAGAGAATTGATGCAGTGAGTAGCTTGGTATACGAAGCAAGCGCAAGAATCAGAGATCCAGTATATGGATGTGCAGGGGCCATTTCCCAGCTCCAAAAACAAATAAACGAACTGCAAGCAGAGCTAGCCAAAACACAGGCTGAGCTTGTCAACATCCACAGCCACCAAACAAATTTGGTGGCTCTAATTTGCAAGGAACTAGCTCAAACACCACCACCGGTGTCGCCCCCGGACCACCTCGCACTCGACAACAATCTCAACACTGCCACTCCTCAGAGCTACACAAATTTGTTTGAAGATAGCAGTATTTGGGAGCCTCTTTGGACATGATTAGACCTGAAAAGGTTGTGGGAAGTCAAAGATGGAGTAGAATATATGAAAGTTGAGTAGTTGAATATTGGGTAATATTAGGCAGTTGTTAGGTTAGATGGGTTCCTCATTTGCTCCCTCATAACCAAGAAAAGTGGAGTGAAGAAGAAAAAGGATGATGTTTACTACACTAGATTAGTGCAAAAGTATTAAGTCTTAGTGTGTGTGTATATATATATCCTTAGATATCTTTGTCAAAGTTCCTTTACTTCAAGTGGTGTCAATTGTGTTGCTTCCCTCCTTTGAAAATGACCACAAATGTCCTCTTGCTATGATCTCGGGCTCAACAACTCGTGGGTTGTGTGAATTTACACATCTAACATTTTGATCGATGATATAGTATTTGA

mRNA sequence

CATATCTCTGTCTTCTTTCTCTCTCTACTGAGTCTAAAATGGACGCAAAATCCAGCCCAACTTCAACCATCTTCCGTTCTCAGTCGCCGTCGTCGTCCCCATTACCGCCGCCTCCGAGTGTTCAGGCCGGCTTGGTGGTCAGTCCGTGTGCTGCGTGCAAGACTCTGAGGCGGAGATGCACAGAGAAATGCGTATTGGCGCCCTATTTCCCTCCCTCTGATCCTCTCAAGTTTACCATTGCTCACCGTATCTTCGGCGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCTGAATCACAGAGAATTGATGCAGTGAGTAGCTTGGTATACGAAGCAAGCGCAAGAATCAGAGATCCAGTATATGGATGTGCAGGGGCCATTTCCCAGCTCCAAAAACAAATAAACGAACTGCAAGCAGAGCTAGCCAAAACACAGGCTGAGCTTGTCAACATCCACAGCCACCAAACAAATTTGGTGGCTCTAATTTGCAAGGAACTAGCTCAAACACCACCACCGGTGTCGCCCCCGGACCACCTCGCACTCGACAACAATCTCAACACTGCCACTCCTCAGAGCTACACAAATTTGTTTGAAGATAGCAGTATTTGGGAGCCTCTTTGGACATGATTAGACCTGAAAAGGTTGTGGGAAGTCAAAGATGGAGTAGAATATATGAAAGTTGAGTAGTTGAATATTGGGTAATATTAGGCAGTTGTTAGGTTAGATGGGTTCCTCATTTGCTCCCTCATAACCAAGAAAAGTGGAGTGAAGAAGAAAAAGGATGATGTTTACTACACTAGATTAGTGCAAAAGTATTAAGTCTTAGTGTGTGTGTATATATATATCCTTAGATATCTTTGTCAAAGTTCCTTTACTTCAAGTGGTGTCAATTGTGTTGCTTCCCTCCTTTGAAAATGACCACAAATGTCCTCTTGCTATGATCTCGGGCTCAACAACTCGTGGGTTGTGTGAATTTACACATCTAACATTTTGATCGATGATATAGTATTTGA

Coding sequence (CDS)

ATGGACGCAAAATCCAGCCCAACTTCAACCATCTTCCGTTCTCAGTCGCCGTCGTCGTCCCCATTACCGCCGCCTCCGAGTGTTCAGGCCGGCTTGGTGGTCAGTCCGTGTGCTGCGTGCAAGACTCTGAGGCGGAGATGCACAGAGAAATGCGTATTGGCGCCCTATTTCCCTCCCTCTGATCCTCTCAAGTTTACCATTGCTCACCGTATCTTCGGCGCTAGCAACATCATCAAATTGCTTCAGGATCTTCCTGAATCACAGAGAATTGATGCAGTGAGTAGCTTGGTATACGAAGCAAGCGCAAGAATCAGAGATCCAGTATATGGATGTGCAGGGGCCATTTCCCAGCTCCAAAAACAAATAAACGAACTGCAAGCAGAGCTAGCCAAAACACAGGCTGAGCTTGTCAACATCCACAGCCACCAAACAAATTTGGTGGCTCTAATTTGCAAGGAACTAGCTCAAACACCACCACCGGTGTCGCCCCCGGACCACCTCGCACTCGACAACAATCTCAACACTGCCACTCCTCAGAGCTACACAAATTTGTTTGAAGATAGCAGTATTTGGGAGCCTCTTTGGACATGA

Protein sequence

MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQKQINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLNTATPQSYTNLFEDSSIWEPLWT
BLAST of Cp4.1LG20g09100 vs. Swiss-Prot
Match: LBD1_ARATH (LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.5e-50
Identity = 111/197 (56.35%), Postives = 139/197 (70.56%), Query Frame = 1

Query: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60
           M++KS  +       S SSSP   PPS+   +V+SPCAACK LRRRC E+CVLAPYFPP+
Sbjct: 1   MESKSDASVATTPIISSSSSP---PPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPT 60

Query: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120
           DP KFTIAHR+FGASNIIK LQ+LPESQR DAV+S+VYEA ARIRDPVYGCAGAI  LQ+
Sbjct: 61  DPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQR 120

Query: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALD-NNLNTATPQ 180
           Q++ELQA+LAK Q E+VN+   ++NL+ LI     Q        D+++ + N+L     +
Sbjct: 121 QVSELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQK---QEQDNMSFESNDLGFLEDK 180

Query: 181 SYTNLFEDSSIWEPLWT 197
           S TN       W+PLWT
Sbjct: 181 SNTN--SSMLWWDPLWT 189

BLAST of Cp4.1LG20g09100 vs. Swiss-Prot
Match: LBD11_ARATH (LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=2)

HSP 1 Score: 199.1 bits (505), Expect = 4.4e-50
Identity = 116/216 (53.70%), Postives = 149/216 (68.98%), Query Frame = 1

Query: 3   AKSSPTSTIFRSQSPSSSPLPPPPSVQAG----LVVSPCAACKTLRRRCTEKCVLAPYFP 62
           AK + T+T   S SP+SSP PPPPS Q      +V+SPCAACK LRRRC +KCVLAPYFP
Sbjct: 19  AKVTETTTPVNSPSPTSSP-PPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFP 78

Query: 63  PSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQL 122
           P+DP KFTIAHR+FGASNIIK LQ+LPESQR DAV+S+VYEA AR+RDPVYGCAGAI  L
Sbjct: 79  PTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHL 138

Query: 123 QKQINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSP--PDHLALDNNLNT- 182
           Q+Q++ELQA+LAKTQ ELV +   +++L+ LI   + QT   V       ++ +++  + 
Sbjct: 139 QRQVSELQAQLAKTQVELVGMQLQRSSLLELI-YNMEQTKLSVQEQGQQKMSFESSFESG 198

Query: 183 ----ATPQSYTN---LFEDS--------SIWEPLWT 197
               ++P   +N     ED+        S W+PLWT
Sbjct: 199 DEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

BLAST of Cp4.1LG20g09100 vs. Swiss-Prot
Match: LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 3.6e-36
Identity = 82/162 (50.62%), Postives = 104/162 (64.20%), Query Frame = 1

Query: 35  SPCAACKTLRRRCTEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVS 94
           SPCA+CK LRRRC + C+ APYFPP DP KF I H++FGASN+ K+LQ+LP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 95  SLVYEASARIRDPVYGCAGAISQLQKQINELQAELAKTQAELV--------NIHSHQTNL 154
           SLV+EA+AR+RDPVYGC GAIS LQ Q+++LQ +LA  QAE++         + SH   L
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQVL 126

Query: 155 VALICKELAQTPPPVSPPDHLAL---DNNLNTATPQSYTNLF 186
                 EL Q        DH AL   +NN+N     +  N F
Sbjct: 127 ------ELDQ--------DHKALLLNNNNINNCNTNNNNNNF 154

BLAST of Cp4.1LG20g09100 vs. Swiss-Prot
Match: LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.1e-36
Identity = 82/169 (48.52%), Postives = 113/169 (66.86%), Query Frame = 1

Query: 35  SPCAACKTLRRRCTEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVS 94
           SPCAACK LRRRC + CV +PYFP  +P KF   HR+FGASN+ K+LQ+LP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 95  SLVYEASARIRDPVYGCAGAISQLQKQINELQAELAKTQAELVNIHSHQ-TNLVAL-ICK 154
           S+VYEA+AR+RDPVYGC GAIS LQ+QI+ LQA+LA  QAE+V++   Q TN     +C 
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

Query: 155 EL-----AQTPPPVSPPDHLALDNNLNTATPQSYTNLFEDSSIWEPLWT 197
           +      + +   VSP D+  +          S+ ++ +++S+ E +W+
Sbjct: 132 DSPSSSGSPSSKQVSPQDNKGM---------FSHMDIVDEASLGESMWS 171

BLAST of Cp4.1LG20g09100 vs. Swiss-Prot
Match: LBD3_ARATH (LOB domain-containing protein 3 OS=Arabidopsis thaliana GN=LBD3 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.9e-33
Identity = 67/112 (59.82%), Postives = 84/112 (75.00%), Query Frame = 1

Query: 31  GLVVSPCAACKTLRRRCT-EKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQR 90
           G  VSPCA CK LRR+C  + CV APYFP  +P KF I H+IFGASN+ K+LQ+L E+ R
Sbjct: 9   GRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHR 68

Query: 91  IDAVSSLVYEASARIRDPVYGCAGAISQLQKQINELQAELAKTQAELVNIHS 142
            DAV S+VYEA+ARI+DPVYGC G IS L +Q+  LQ +LA  QAEL++I +
Sbjct: 69  SDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIRT 120

BLAST of Cp4.1LG20g09100 vs. TrEMBL
Match: A0A0A0LS55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G088450 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.3e-64
Identity = 131/157 (83.44%), Postives = 139/157 (88.54%), Query Frame = 1

Query: 48  TEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDP 107
           T KCVLAPYFPPSDPLKFTIAHRIFGASNIIKLL DLP+SQR DAVSSLVYEASARIRDP
Sbjct: 9   TMKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDP 68

Query: 108 VYGCAGAISQLQKQINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSP---- 167
           VYGCAGAI QLQKQINELQAELAKTQAELVNIH HQTNLVALICKELAQTPPP+S     
Sbjct: 69  VYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLL 128

Query: 168 PDHLALDNNLN-TATPQS---YTNLFEDSSIWEPLWT 197
           P+H +LDN+ N  ATPQS   YT+LF DS+IW+PLWT
Sbjct: 129 PEHRSLDNSFNIVATPQSYQGYTSLFGDSNIWDPLWT 165

BLAST of Cp4.1LG20g09100 vs. TrEMBL
Match: M5W070_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011528mg PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.6e-59
Identity = 130/209 (62.20%), Postives = 154/209 (73.68%), Query Frame = 1

Query: 1   MDAKSSPTSTIFRSQSPSSSP------LPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLA 60
           M+   + TS+   SQSPSSSP      LPP P+    +V+SPCAACK LRRRC EKCVLA
Sbjct: 1   MNTNYTTTSSTPLSQSPSSSPSSPPPPLPPTPTPNPPVVISPCAACKILRRRCAEKCVLA 60

Query: 61  PYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGA 120
           PYFPP++P KFTIAHR+FGASNIIK LQ+LPESQR DAVSS+VYEASARIRDPVYGCAGA
Sbjct: 61  PYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGA 120

Query: 121 ISQLQKQINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLN 180
           I  LQKQ+NELQA+LAK QAELVN+   Q NLVALIC E+ Q+    SP    +LD+N  
Sbjct: 121 ICHLQKQVNELQAQLAKAQAELVNMQCQQANLVALICMEMTQSNDQGSPQQ--SLDHNFI 180

Query: 181 TA---TPQSYTNLFEDS----SIWEPLWT 197
           T+   + Q   +  +D+    S+WEPLWT
Sbjct: 181 TSSHGSNQGNISFLDDTTTLGSLWEPLWT 207

BLAST of Cp4.1LG20g09100 vs. TrEMBL
Match: A0A061GTD1_THECC (LOB domain-containing protein 1 OS=Theobroma cacao GN=TCM_041094 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.1e-59
Identity = 127/199 (63.82%), Postives = 153/199 (76.88%), Query Frame = 1

Query: 5   SSPTSTIFRSQSPSSSPLPPPPSVQAG--LVVSPCAACKTLRRRCTEKCVLAPYFPPSDP 64
           SSP S    S + SSSP PPPP+  +   +V+SPCAACK LRRRC +KCVLAPYFPP++P
Sbjct: 22  SSPQSLSPNSSNSSSSPPPPPPTTTSTPPVVISPCAACKILRRRCADKCVLAPYFPPTEP 81

Query: 65  LKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQKQI 124
            KFTIAHR+FGASNIIK LQ+LPESQR DAVSS+VYEASARIRDPVYGCAGAI QLQKQ+
Sbjct: 82  AKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQV 141

Query: 125 NELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLNT-ATPQSY 184
           NELQA+LAK QAE+VN+   Q NLVAL+C E+AQ+P P S     ++D  +++  + QS 
Sbjct: 142 NELQAQLAKAQAEVVNMQLQQANLVALLCVEMAQSPQPNS---QQSVDTFISSPPSYQSN 201

Query: 185 TNLFEDS----SIWEPLWT 197
               ED+    S+WEPLWT
Sbjct: 202 PGFLEDNNNLGSLWEPLWT 217

BLAST of Cp4.1LG20g09100 vs. TrEMBL
Match: A0A0L9V6W4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g155500 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.7e-59
Identity = 127/200 (63.50%), Postives = 151/200 (75.50%), Query Frame = 1

Query: 6   SPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPSDPLKF 65
           +PTS+   S SP+SS   PPP     +V+SPCAACK LRRRC EKCVLAPYFPP++P KF
Sbjct: 8   TPTSSAPLSHSPTSSSSSPPPPPPPTVVMSPCAACKILRRRCAEKCVLAPYFPPTEPAKF 67

Query: 66  TIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQKQINEL 125
           TIAHR+FGASNIIK LQ+LPESQR DAV+S+VYEASARIRDPVYGCAGAI QLQKQ+NEL
Sbjct: 68  TIAHRVFGASNIIKFLQELPESQRADAVTSMVYEASARIRDPVYGCAGAICQLQKQVNEL 127

Query: 126 QAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLNT-----ATPQS 185
           QA+LAK+QAELV +   Q NLVALIC E+AQ+P   SP    ++DN ++T          
Sbjct: 128 QAQLAKSQAELVTMQLQQANLVALICMEMAQSPQE-SPQQ--SVDNFISTPPHTGGYQSG 187

Query: 186 YTNLFED----SSIWEPLWT 197
             N FE+    +S+WEPLWT
Sbjct: 188 VNNFFEENTSPNSLWEPLWT 204

BLAST of Cp4.1LG20g09100 vs. TrEMBL
Match: A0A0S3SCU3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G190300 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.7e-59
Identity = 127/200 (63.50%), Postives = 151/200 (75.50%), Query Frame = 1

Query: 6   SPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPSDPLKF 65
           +PTS+   S SP+SS   PPP     +V+SPCAACK LRRRC EKCVLAPYFPP++P KF
Sbjct: 8   TPTSSAPLSHSPTSSSSSPPPPPPPTVVMSPCAACKILRRRCAEKCVLAPYFPPTEPAKF 67

Query: 66  TIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQKQINEL 125
           TIAHR+FGASNIIK LQ+LPESQR DAV+S+VYEASARIRDPVYGCAGAI QLQKQ+NEL
Sbjct: 68  TIAHRVFGASNIIKFLQELPESQRADAVTSMVYEASARIRDPVYGCAGAICQLQKQVNEL 127

Query: 126 QAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLNT-----ATPQS 185
           QA+LAK+QAELV +   Q NLVALIC E+AQ+P   SP    ++DN ++T          
Sbjct: 128 QAQLAKSQAELVTMQLQQANLVALICMEMAQSPQE-SPQQ--SVDNFISTPPHTGGYQSG 187

Query: 186 YTNLFED----SSIWEPLWT 197
             N FE+    +S+WEPLWT
Sbjct: 188 VNNFFEENTSPNSLWEPLWT 204

BLAST of Cp4.1LG20g09100 vs. TAIR10
Match: AT1G07900.1 (AT1G07900.1 LOB domain-containing protein 1)

HSP 1 Score: 200.7 bits (509), Expect = 8.5e-52
Identity = 111/197 (56.35%), Postives = 139/197 (70.56%), Query Frame = 1

Query: 1   MDAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 60
           M++KS  +       S SSSP   PPS+   +V+SPCAACK LRRRC E+CVLAPYFPP+
Sbjct: 1   MESKSDASVATTPIISSSSSP---PPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPT 60

Query: 61  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 120
           DP KFTIAHR+FGASNIIK LQ+LPESQR DAV+S+VYEA ARIRDPVYGCAGAI  LQ+
Sbjct: 61  DPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQR 120

Query: 121 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALD-NNLNTATPQ 180
           Q++ELQA+LAK Q E+VN+   ++NL+ LI     Q        D+++ + N+L     +
Sbjct: 121 QVSELQAQLAKAQVEMVNMQFQRSNLLELIYNMDQQQK---QEQDNMSFESNDLGFLEDK 180

Query: 181 SYTNLFEDSSIWEPLWT 197
           S TN       W+PLWT
Sbjct: 181 SNTN--SSMLWWDPLWT 189

BLAST of Cp4.1LG20g09100 vs. TAIR10
Match: AT2G28500.1 (AT2G28500.1 LOB domain-containing protein 11)

HSP 1 Score: 199.1 bits (505), Expect = 2.5e-51
Identity = 116/216 (53.70%), Postives = 149/216 (68.98%), Query Frame = 1

Query: 3   AKSSPTSTIFRSQSPSSSPLPPPPSVQAG----LVVSPCAACKTLRRRCTEKCVLAPYFP 62
           AK + T+T   S SP+SSP PPPPS Q      +V+SPCAACK LRRRC +KCVLAPYFP
Sbjct: 19  AKVTETTTPVNSPSPTSSP-PPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFP 78

Query: 63  PSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQL 122
           P+DP KFTIAHR+FGASNIIK LQ+LPESQR DAV+S+VYEA AR+RDPVYGCAGAI  L
Sbjct: 79  PTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHL 138

Query: 123 QKQINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSP--PDHLALDNNLNT- 182
           Q+Q++ELQA+LAKTQ ELV +   +++L+ LI   + QT   V       ++ +++  + 
Sbjct: 139 QRQVSELQAQLAKTQVELVGMQLQRSSLLELI-YNMEQTKLSVQEQGQQKMSFESSFESG 198

Query: 183 ----ATPQSYTN---LFEDS--------SIWEPLWT 197
               ++P   +N     ED+        S W+PLWT
Sbjct: 199 DEFISSPDEESNDLGFLEDNNNNNNSSMSWWDPLWT 232

BLAST of Cp4.1LG20g09100 vs. TAIR10
Match: AT2G30130.1 (AT2G30130.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 152.9 bits (385), Expect = 2.0e-37
Identity = 82/162 (50.62%), Postives = 104/162 (64.20%), Query Frame = 1

Query: 35  SPCAACKTLRRRCTEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVS 94
           SPCA+CK LRRRC + C+ APYFPP DP KF I H++FGASN+ K+LQ+LP  QR DAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 95  SLVYEASARIRDPVYGCAGAISQLQKQINELQAELAKTQAELV--------NIHSHQTNL 154
           SLV+EA+AR+RDPVYGC GAIS LQ Q+++LQ +LA  QAE++         + SH   L
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQSHHQVL 126

Query: 155 VALICKELAQTPPPVSPPDHLAL---DNNLNTATPQSYTNLF 186
                 EL Q        DH AL   +NN+N     +  N F
Sbjct: 127 ------ELDQ--------DHKALLLNNNNINNCNTNNNNNNF 154

BLAST of Cp4.1LG20g09100 vs. TAIR10
Match: AT1G31320.1 (AT1G31320.1 LOB domain-containing protein 4)

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-37
Identity = 82/169 (48.52%), Postives = 113/169 (66.86%), Query Frame = 1

Query: 35  SPCAACKTLRRRCTEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVS 94
           SPCAACK LRRRC + CV +PYFP  +P KF   HR+FGASN+ K+LQ+LP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 95  SLVYEASARIRDPVYGCAGAISQLQKQINELQAELAKTQAELVNIHSHQ-TNLVAL-ICK 154
           S+VYEA+AR+RDPVYGC GAIS LQ+QI+ LQA+LA  QAE+V++   Q TN     +C 
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

Query: 155 EL-----AQTPPPVSPPDHLALDNNLNTATPQSYTNLFEDSSIWEPLWT 197
           +      + +   VSP D+  +          S+ ++ +++S+ E +W+
Sbjct: 132 DSPSSSGSPSSKQVSPQDNKGM---------FSHMDIVDEASLGESMWS 171

BLAST of Cp4.1LG20g09100 vs. TAIR10
Match: AT1G16530.1 (AT1G16530.1 ASYMMETRIC LEAVES 2-like 9)

HSP 1 Score: 142.5 bits (358), Expect = 2.7e-34
Identity = 67/112 (59.82%), Postives = 84/112 (75.00%), Query Frame = 1

Query: 31  GLVVSPCAACKTLRRRCT-EKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQR 90
           G  VSPCA CK LRR+C  + CV APYFP  +P KF I H+IFGASN+ K+LQ+L E+ R
Sbjct: 9   GRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHR 68

Query: 91  IDAVSSLVYEASARIRDPVYGCAGAISQLQKQINELQAELAKTQAELVNIHS 142
            DAV S+VYEA+ARI+DPVYGC G IS L +Q+  LQ +LA  QAEL++I +
Sbjct: 69  SDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIRT 120

BLAST of Cp4.1LG20g09100 vs. NCBI nr
Match: gi|659072131|ref|XP_008463550.1| (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 317.0 bits (811), Expect = 2.3e-83
Identity = 168/202 (83.17%), Postives = 178/202 (88.12%), Query Frame = 1

Query: 2   DAKSSPTSTIFRSQSPSSSPLPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPSD 61
           + KSSPTST+  SQSPS SP  PPP+VQA +VVSPCAACK LRRRC EKCVLAPYFPPSD
Sbjct: 5   EVKSSPTSTLL-SQSPSPSP-SPPPTVQAPVVVSPCAACKILRRRCAEKCVLAPYFPPSD 64

Query: 62  PLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQKQ 121
           PLKFTIAHRIFGASNIIKLL DLP+SQR DAVSSLVYEASARIRDPVYGCAGAI QLQKQ
Sbjct: 65  PLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQKQ 124

Query: 122 INELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSP----PDHLALDNNLNTAT 181
           INELQAELAKTQAELVNIH HQTNLVALICKELAQTPPP+S     PDH +LDNN N AT
Sbjct: 125 INELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSLSLLPDHRSLDNNFNIAT 184

Query: 182 PQS---YTNLFEDSSIWEPLWT 197
           PQS   YT+LFEDS+IW+PLWT
Sbjct: 185 PQSYQGYTSLFEDSNIWDPLWT 204

BLAST of Cp4.1LG20g09100 vs. NCBI nr
Match: gi|449459130|ref|XP_004147299.1| (PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 312.4 bits (799), Expect = 5.7e-82
Identity = 165/204 (80.88%), Postives = 178/204 (87.25%), Query Frame = 1

Query: 2   DAKSSPTSTIFRSQSPSSSPLP-PPPSVQAGLVVSPCAACKTLRRRCTEKCVLAPYFPPS 61
           D KSSPTST+  S SPS SP P PPP+VQA +VV+PCAACK LRRRCT+KCVLAPYFPPS
Sbjct: 5   DTKSSPTSTLLLSHSPSPSPSPSPPPTVQAHVVVTPCAACKILRRRCTQKCVLAPYFPPS 64

Query: 62  DPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGAISQLQK 121
           DPLKFTIAHRIFGASNIIKLL DLP+SQR DAVSSLVYEASARIRDPVYGCAGAI QLQK
Sbjct: 65  DPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDPVYGCAGAICQLQK 124

Query: 122 QINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSP----PDHLALDNNLN-T 181
           QINELQAELAKTQAELVNIH HQTNLVALICKELAQTPPP+S     P+H +LDN+ N  
Sbjct: 125 QINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLLPEHRSLDNSFNIV 184

Query: 182 ATPQS---YTNLFEDSSIWEPLWT 197
           ATPQS   YT+LF DS+IW+PLWT
Sbjct: 185 ATPQSYQGYTSLFGDSNIWDPLWT 208

BLAST of Cp4.1LG20g09100 vs. NCBI nr
Match: gi|700209659|gb|KGN64755.1| (hypothetical protein Csa_1G088450 [Cucumis sativus])

HSP 1 Score: 251.9 bits (642), Expect = 9.1e-64
Identity = 131/157 (83.44%), Postives = 139/157 (88.54%), Query Frame = 1

Query: 48  TEKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDP 107
           T KCVLAPYFPPSDPLKFTIAHRIFGASNIIKLL DLP+SQR DAVSSLVYEASARIRDP
Sbjct: 9   TMKCVLAPYFPPSDPLKFTIAHRIFGASNIIKLLLDLPDSQRADAVSSLVYEASARIRDP 68

Query: 108 VYGCAGAISQLQKQINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSP---- 167
           VYGCAGAI QLQKQINELQAELAKTQAELVNIH HQTNLVALICKELAQTPPP+S     
Sbjct: 69  VYGCAGAICQLQKQINELQAELAKTQAELVNIHCHQTNLVALICKELAQTPPPMSSSSLL 128

Query: 168 PDHLALDNNLN-TATPQS---YTNLFEDSSIWEPLWT 197
           P+H +LDN+ N  ATPQS   YT+LF DS+IW+PLWT
Sbjct: 129 PEHRSLDNSFNIVATPQSYQGYTSLFGDSNIWDPLWT 165

BLAST of Cp4.1LG20g09100 vs. NCBI nr
Match: gi|645217187|ref|XP_008224697.1| (PREDICTED: LOB domain-containing protein 1-like [Prunus mume])

HSP 1 Score: 237.7 bits (605), Expect = 1.8e-59
Identity = 130/209 (62.20%), Postives = 154/209 (73.68%), Query Frame = 1

Query: 1   MDAKSSPTSTIFRSQSPSSSP------LPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLA 60
           M+   + TS+   SQSPSSSP      LPP P+    +V+SPCAACK LRRRC +KCVLA
Sbjct: 8   MNTNYTTTSSTPLSQSPSSSPSSPPPPLPPTPTPNPPVVISPCAACKILRRRCADKCVLA 67

Query: 61  PYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGA 120
           PYFPP++P KFTIAHR+FGASNIIK LQDLPESQR DAVSS+VYEASARIRDPVYGCAGA
Sbjct: 68  PYFPPTEPAKFTIAHRVFGASNIIKFLQDLPESQRADAVSSMVYEASARIRDPVYGCAGA 127

Query: 121 ISQLQKQINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNL- 180
           I  LQKQ+NELQA+LAK QAELVN+   Q NLVALIC E+ Q+    SP    +LD+N  
Sbjct: 128 ICHLQKQVNELQAQLAKAQAELVNMQCQQANLVALICMEMTQSNEQGSPQQ--SLDHNFI 187

Query: 181 --NTATPQSYTNLFEDS----SIWEPLWT 197
             +  + QS  +  +D+    S+WEPLWT
Sbjct: 188 ASSHGSNQSNLSFLDDTTTLGSLWEPLWT 214

BLAST of Cp4.1LG20g09100 vs. NCBI nr
Match: gi|595829650|ref|XP_007205910.1| (hypothetical protein PRUPE_ppa011528mg [Prunus persica])

HSP 1 Score: 237.3 bits (604), Expect = 2.3e-59
Identity = 130/209 (62.20%), Postives = 154/209 (73.68%), Query Frame = 1

Query: 1   MDAKSSPTSTIFRSQSPSSSP------LPPPPSVQAGLVVSPCAACKTLRRRCTEKCVLA 60
           M+   + TS+   SQSPSSSP      LPP P+    +V+SPCAACK LRRRC EKCVLA
Sbjct: 1   MNTNYTTTSSTPLSQSPSSSPSSPPPPLPPTPTPNPPVVISPCAACKILRRRCAEKCVLA 60

Query: 61  PYFPPSDPLKFTIAHRIFGASNIIKLLQDLPESQRIDAVSSLVYEASARIRDPVYGCAGA 120
           PYFPP++P KFTIAHR+FGASNIIK LQ+LPESQR DAVSS+VYEASARIRDPVYGCAGA
Sbjct: 61  PYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGA 120

Query: 121 ISQLQKQINELQAELAKTQAELVNIHSHQTNLVALICKELAQTPPPVSPPDHLALDNNLN 180
           I  LQKQ+NELQA+LAK QAELVN+   Q NLVALIC E+ Q+    SP    +LD+N  
Sbjct: 121 ICHLQKQVNELQAQLAKAQAELVNMQCQQANLVALICMEMTQSNDQGSPQQ--SLDHNFI 180

Query: 181 TA---TPQSYTNLFEDS----SIWEPLWT 197
           T+   + Q   +  +D+    S+WEPLWT
Sbjct: 181 TSSHGSNQGNISFLDDTTTLGSLWEPLWT 207

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
LBD1_ARATH1.5e-5056.35LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1[more]
LBD11_ARATH4.4e-5053.70LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=2[more]
LBD12_ARATH3.6e-3650.62LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2[more]
LBD4_ARATH6.1e-3648.52LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1[more]
LBD3_ARATH4.9e-3359.82LOB domain-containing protein 3 OS=Arabidopsis thaliana GN=LBD3 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LS55_CUCSA6.3e-6483.44Uncharacterized protein OS=Cucumis sativus GN=Csa_1G088450 PE=4 SV=1[more]
M5W070_PRUPE1.6e-5962.20Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011528mg PE=4 SV=1[more]
A0A061GTD1_THECC2.1e-5963.82LOB domain-containing protein 1 OS=Theobroma cacao GN=TCM_041094 PE=4 SV=1[more]
A0A0L9V6W4_PHAAN4.7e-5963.50Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g155500 PE=4 SV=1[more]
A0A0S3SCU3_PHAAN4.7e-5963.50Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G190300 PE=... [more]
Match NameE-valueIdentityDescription
AT1G07900.18.5e-5256.35 LOB domain-containing protein 1[more]
AT2G28500.12.5e-5153.70 LOB domain-containing protein 11[more]
AT2G30130.12.0e-3750.62 Lateral organ boundaries (LOB) domain family protein[more]
AT1G31320.13.5e-3748.52 LOB domain-containing protein 4[more]
AT1G16530.12.7e-3459.82 ASYMMETRIC LEAVES 2-like 9[more]
Match NameE-valueIdentityDescription
gi|659072131|ref|XP_008463550.1|2.3e-8383.17PREDICTED: LOB domain-containing protein 1-like [Cucumis melo][more]
gi|449459130|ref|XP_004147299.1|5.7e-8280.88PREDICTED: LOB domain-containing protein 1-like [Cucumis sativus][more]
gi|700209659|gb|KGN64755.1|9.1e-6483.44hypothetical protein Csa_1G088450 [Cucumis sativus][more]
gi|645217187|ref|XP_008224697.1|1.8e-5962.20PREDICTED: LOB domain-containing protein 1-like [Prunus mume][more]
gi|595829650|ref|XP_007205910.1|2.3e-5962.20hypothetical protein PRUPE_ppa011528mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g09100.1Cp4.1LG20g09100.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 36..133
score: 3.8
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 35..136
score: 26
NoneNo IPR availableunknownCoilCoilcoord: 115..142
scor
NoneNo IPR availablePANTHERPTHR31301FAMILY NOT NAMEDcoord: 8..195
score: 5.9E
NoneNo IPR availablePANTHERPTHR31301:SF14LOB DOMAIN-CONTAINING PROTEIN 1-RELATEDcoord: 8..195
score: 5.9E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG20g09100Cp4.1LG01g04270Cucurbita pepo (Zucchini)cpecpeB386
Cp4.1LG20g09100Cp4.1LG01g10320Cucurbita pepo (Zucchini)cpecpeB388
Cp4.1LG20g09100Cp4.1LG02g12790Cucurbita pepo (Zucchini)cpecpeB432
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG20g09100Wax gourdcpewgoB0636
Cp4.1LG20g09100Cucurbita pepo (Zucchini)cpecpeB296
Cp4.1LG20g09100Cucurbita pepo (Zucchini)cpecpeB413
Cp4.1LG20g09100Cucumber (Gy14) v1cgycpeB0582
Cp4.1LG20g09100Wild cucumber (PI 183967)cpecpiB518
Cp4.1LG20g09100Cucumber (Chinese Long) v2cpecuB516
Cp4.1LG20g09100Watermelon (Charleston Gray)cpewcgB467
Cp4.1LG20g09100Watermelon (97103) v1cpewmB507
Cp4.1LG20g09100Silver-seed gourdcarcpeB0469
Cp4.1LG20g09100Cucumber (Chinese Long) v3cpecucB0635