Cucsa.383800 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.383800
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionZinc finger, C2H2
Locationscaffold03882 : 916255 .. 916759 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGCTCACAAGGCGTTCAAGAGCTTAGAATTATAACCAAACCCAAAATGAAGCCACAACTTAAAGCTAAAGCCTCAAGAAAACATAACAACAAAAGAGAAGGAAATCAAGAAGAAGAAGAGGAAAAAGAGATTATTGTTGAATTTCCATGGGCTTCTTCAAGAGCTTCTTATACATGTGGCTTTTGCAAAAGGCAATTTCAATCTGCACAAGCCCTTGGTGGCCACATGAATGTTCATCGACGAGACCGAGCAAAGCTCCGAAGATCTCTGCCGTTGGATTCGGCCACTAATGATGATCATCATCATGATTTTCATGGATCCTCATCTCAGCCCATTAAGTTTCTTAAACTGTATGATTTTTCAAGCTTTCATGGCGAACAAGCTGATGATCAATCAGATGGTGGGTGTCAGATCTGGAAGAAGGTCAATAAGTTTGTGAAGAAGGAGACTGCTTTGCTTGCTACTTCAAATGACATAGATTTGGAACTCAGATTAGGGTTTTAA

mRNA sequence

CAGCTCACAAGGCGTTCAAGAGCTTAGAATTATAACCAAACCCAAAATGAAGCCACAACTTAAAGCTAAAGCCTCAAGAAAACATAACAACAAAAGAGAAGGAAATCAAGAAGAAGAAGAGGAAAAAGAGATTATTGTTGAATTTCCATGGGCTTCTTCAAGAGCTTCTTATACATGTGGCTTTTGCAAAAGGCAATTTCAATCTGCACAAGCCCTTGGTGGCCACATGAATGTTCATCGACGAGACCGAGCAAAGCTCCGAAGATCTCTGCCGTTGGATTCGGCCACTAATGATGATCATCATCATGATTTTCATGGATCCTCATCTCAGCCCATTAAGTTTCTTAAACTGTATGATTTTTCAAGCTTTCATGGCGAACAAGCTGATGATCAATCAGATGGTGGGTGTCAGATCTGGAAGAAGGTCAATAAGTTTGTGAAGAAGGAGACTGCTTTGCTTGCTACTTCAAATGACATAGATTTGGAACTCAGATTAGGGTTTTAA

Coding sequence (CDS)

CAGCTCACAAGGCGTTCAAGAGCTTAGAATTATAACCAAACCCAAAATGAAGCCACAACTTAAAGCTAAAGCCTCAAGAAAACATAACAACAAAAGAGAAGGAAATCAAGAAGAAGAAGAGGAAAAAGAGATTATTGTTGAATTTCCATGGGCTTCTTCAAGAGCTTCTTATACATGTGGCTTTTGCAAAAGGCAATTTCAATCTGCACAAGCCCTTGGTGGCCACATGAATGTTCATCGACGAGACCGAGCAAAGCTCCGAAGATCTCTGCCGTTGGATTCGGCCACTAATGATGATCATCATCATGATTTTCATGGATCCTCATCTCAGCCCATTAAGTTTCTTAAACTGTATGATTTTTCAAGCTTTCATGGCGAACAAGCTGATGATCAATCAGATGGTGGGTGTCAGATCTGGAAGAAGGTCAATAAGTTTGTGAAGAAGGAGACTGCTTTGCTTGCTACTTCAAATGACATAGATTTGGAACTCAGATTAGGGTTTTAA

Protein sequence

SSQGVQELRIITKPKMKPQLKAKASRKHNNKREGNQEEEEEKEIIVEFPWASSRASYTCGFCKRQFQSAQALGGHMNVHRRDRAKLRRSLPLDSATNDDHHHDFHGSSSQPIKFLKLYDFSSFHGEQADDQSDGGCQIWKKVNKFVKKETALLATSNDIDLELRLGF*
Homology
[Close]
BLAST of Cucsa.383800 vs. Swiss-Prot
Match: SUP_ARATH (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-11
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1 

Query: 39 EEEKEIIVEFPWASSRASYTCGFCKRQFQSAQALGGHMNVHRRDRAKLR-RSLPLDSAT 97
          +++ + ++ F W     SYTC FCKR+F+SAQALGGHMNVHRRDRA+LR +  P  S+T
Sbjct: 31 QQDHDYLLGFSWPPR--SYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSST 87

[Close]
BLAST of Cucsa.383800 vs. Swiss-Prot
Match: RBE_ARATH (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 7.2e-09
Identity = 27/42 (64.29%), Postives = 35/42 (83.33%), Query Frame = 1 

Query: 56 SYTCGFCKRQFQSAQALGGHMNVHRRDRAKLRRSLPLDSATN 98
          SY+C FC R+F+SAQALGGHMNVHRRDRA+L++     S+T+
Sbjct: 54 SYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTD 95

[Close]
BLAST of Cucsa.383800 vs. Swiss-Prot
Match: TAC1_ARATH (Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 1 

Query: 56 SYTCGFCKRQFQSAQALGGHMNVHRRDRAKLRRSLPLDS 95
          SY C FC R F +AQALGGHMN+HRRDRAKLR+ L  D+
Sbjct: 34 SYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQKLMEDN 72

[Close]
BLAST of Cucsa.383800 vs. Swiss-Prot
Match: LATE_ARATH (Protein LATE FLOWERING OS=Arabidopsis thaliana GN=LATE PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-06
Identity = 31/85 (36.47%), Postives = 42/85 (49.41%), Query Frame = 1 

Query: 28  HNNKREGNQEEEEEKEIIVEFPWASSRASYTCGFCKRQFQSAQALGGHMNVHRRDRAKLR 87
           H  + EG +E +  KE        SS   + C FC R+F S+QALGGH N H+++R   R
Sbjct: 6   HQVEVEGEEEIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAAR 65

Query: 88  RS-LPLDSATNDDHHHDFHGSSSQP 112
           R+    D   N+D  H      S P
Sbjct: 66  RAKRAYDFVNNNDFLHTLPVFLSSP 90

[Close]
BLAST of Cucsa.383800 vs. TrEMBL
Match: A0A0A0LNQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G190780 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 8.0e-92
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1 

Query: 1   SSQGVQELRIITKPKMKPQLKAKASRKHNNKREGNQEEEEEKEIIVEFPWASSRASYTCG 60
           SSQGVQELRIITKPKMKPQLKAKASRKHNNKREGNQEEEEEKEIIVEFPWASSRASYTCG
Sbjct: 14  SSQGVQELRIITKPKMKPQLKAKASRKHNNKREGNQEEEEEKEIIVEFPWASSRASYTCG 73

Query: 61  FCKRQFQSAQALGGHMNVHRRDRAKLRRSLPLDSATNDDHHHDFHGSSSQPIKFLKLYDF 120
           FCKRQFQSAQALGGHMNVHRRDRAKLRRSLPLDSATNDDHHHDFHGSSSQPIKFLKLYDF
Sbjct: 74  FCKRQFQSAQALGGHMNVHRRDRAKLRRSLPLDSATNDDHHHDFHGSSSQPIKFLKLYDF 133

Query: 121 SSFHGEQADDQSDGGCQIWKKVNKFVKKETALLATSNDIDLELRLGF 168
           SSFHGEQADDQSDGGCQIWKKVNKFVKKETALLATSNDIDLELRLGF
Sbjct: 134 SSFHGEQADDQSDGGCQIWKKVNKFVKKETALLATSNDIDLELRLGF 180

[Close]
BLAST of Cucsa.383800 vs. TrEMBL
Match: M5XPB2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015007mg PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-12
Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = 1 

Query: 13 KPKMKPQLK--AKASRKHNNKREGNQEEEEEKEIIVEFPWASSRASYTCGFCKRQFQSAQ 72
          K ++   LK   +A R  NNKR  +  +  E++ I  F W     SYTC FCKR+F+SAQ
Sbjct: 3  KNRLSNNLKEHGRAIRDSNNKRIIHCSQSCEEDYINGFSWPPR--SYTCSFCKREFRSAQ 62

Query: 73 ALGGHMNVHRRDRAKLRRSLPLDS 95
          ALGGHMNVHR+DRA+L+ S P+D+
Sbjct: 63 ALGGHMNVHRKDRARLKNSPPIDA 84

[Close]
BLAST of Cucsa.383800 vs. TrEMBL
Match: K7M271_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G269400 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-12
Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = 1 

Query: 28  HNNKREGNQEEEEEKEIIVEFPWASSRASYTCGFCKRQFQSAQALGGHMNVHRRDRAKLR 87
           +NN    N    ++ + +  FPW     SYTC FC+++F+SAQALGGHMNVHRRDRA+LR
Sbjct: 31  NNNNIHSNNNIADQNDYVNGFPWPPR--SYTCSFCRKEFRSAQALGGHMNVHRRDRARLR 90

Query: 88  RSLPLDSATNDDHHHDFHGSSSQPIKFLKL 118
           +S P        HH    G +  P+  L L
Sbjct: 91  QSSP------PTHHEVHQGQAQGPMLNLNL 112

[Close]
BLAST of Cucsa.383800 vs. TrEMBL
Match: A0A0B2RYH3_GLYSO (Transcriptional regulator SUPERMAN OS=Glycine soja GN=glysoja_001623 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-12
Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = 1 

Query: 28  HNNKREGNQEEEEEKEIIVEFPWASSRASYTCGFCKRQFQSAQALGGHMNVHRRDRAKLR 87
           +NN    N    ++ + +  FPW     SYTC FC+++F+SAQALGGHMNVHRRDRA+LR
Sbjct: 38  NNNNIHSNNNIADQNDYVNGFPWPPR--SYTCSFCRKEFRSAQALGGHMNVHRRDRARLR 97

Query: 88  RSLPLDSATNDDHHHDFHGSSSQPIKFLKL 118
           +S P        HH    G +  P+  L L
Sbjct: 98  QSSP------PTHHEVHQGQAQGPMLNLNL 119

[Close]
BLAST of Cucsa.383800 vs. TrEMBL
Match: A0A0K9PAL0_ZOSMR (Uncharacterized protein OS=Zostera marina GN=ZOSMA_32G00670 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 8.2e-12
Identity = 58/146 (39.73%), Postives = 74/146 (50.68%), Query Frame = 1 

Query: 21  KAKASRKHNNKREGNQEEEEEKEIIVEFPWASSRASYTCGFCKRQFQSAQALGGHMNVHR 80
           K + S+  N    G+ E       +  +PW     SYTC FCKR+ +SAQALGGHMNVHR
Sbjct: 3   KCRKSKLSNRACRGS-EVSNYGSFLTGYPWPPK--SYTCCFCKRELRSAQALGGHMNVHR 62

Query: 81  RDRAKLRRSLPLDSATNDDHHHDFHGSSSQPIKFLKLYDFSSFHGEQADDQSDGGCQIWK 140
           RDRAKLR SL   S  + +   D +  +   +  +      SFH ++   Q D     WK
Sbjct: 63  RDRAKLRESL---SPHSWESACDTNRLNIPDLNIVPPASSISFHVQKYPKQVDRHLS-WK 122

Query: 141 KVNKFVKKETALLATSNDIDLELRLG 167
                  KE A L    D+DLELRLG
Sbjct: 123 ------NKEDARL--DEDLDLELRLG 133

[Close]
BLAST of Cucsa.383800 vs. TAIR10
Match: AT2G42410.1 (AT2G42410.1 zinc finger protein 11)

HSP 1 Score: 70.9 bits (172), Expect = 8.7e-13
Identity = 38/94 (40.43%), Postives = 54/94 (57.45%), Query Frame = 1 

Query: 17  KPQLKAKASRKHNNKREGNQEEEEEKEIIVEF--------PWASSRASYTCGFCKRQFQS 76
           +  L + ++R    + EG     + + I+  +        PW     +YTC FC+R+F+S
Sbjct: 3   RTHLASFSNRDKTQEEEGEDGNGDNRVIMNHYKNYEAGLIPWPPK--NYTCSFCRREFRS 62

Query: 77  AQALGGHMNVHRRDRAKLRRSLPLDSATNDDHHH 103
           AQALGGHMNVHRRDRAKLR+   + S   + HHH
Sbjct: 63  AQALGGHMNVHRRDRAKLRQ---IPSWLFEPHHH 91

[Close]
BLAST of Cucsa.383800 vs. TAIR10
Match: AT3G53820.1 (AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12
Identity = 46/121 (38.02%), Postives = 69/121 (57.02%), Query Frame = 1 

Query: 48  FPWASSRAS-YTCGFCKRQFQSAQALGGHMNVHRRDRAKLRRSLPLDSATNDDHHHDFHG 107
           + W+ S+A  Y C FC+R F +AQALGGHMN+HR+DRAKLR++   +  + D        
Sbjct: 11  YSWSGSQARPYICEFCERGFSNAQALGGHMNIHRKDRAKLRQANLKEEDSEDAICTTSRN 70

Query: 108 SSSQPIKFLKLY-DFSSFHGEQADDQSDGGCQIWKKVNKFVKKETALLATSNDIDLELRL 167
              Q +  L  + D      +  DD+S+ G    +K N  + ++ AL  +++ IDLELRL
Sbjct: 71  RFGQELIELPFFVDTVGPRRKGEDDKSEKGLGDEEKKNMRILQK-ALSQSADVIDLELRL 130

[Close]
BLAST of Cucsa.383800 vs. TAIR10
Match: AT3G23130.1 (AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 2.5e-12
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1 

Query: 39 EEEKEIIVEFPWASSRASYTCGFCKRQFQSAQALGGHMNVHRRDRAKLR-RSLPLDSAT 97
          +++ + ++ F W     SYTC FCKR+F+SAQALGGHMNVHRRDRA+LR +  P  S+T
Sbjct: 31 QQDHDYLLGFSWPPR--SYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSST 87

[Close]
BLAST of Cucsa.383800 vs. TAIR10
Match: AT2G37740.1 (AT2G37740.1 zinc-finger protein 10)

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-11
Identity = 38/83 (45.78%), Postives = 50/83 (60.24%), Query Frame = 1 

Query: 32  REGNQEEEEEKEIIVEFPWASSR---ASYTCGFCKRQFQSAQALGGHMNVHRRDRAKLRR 91
           ++ N+E   E+    E   A S     SYTC FC+R+F+SAQALGGHMNVHRRDRA+L++
Sbjct: 11  KKSNKESSWEELAFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQ 70

Query: 92  SLPLDSATNDDHHHDFHGSSSQP 112
           +         D  + F  SSS P
Sbjct: 71  A---------DDQYLFPKSSSSP 84

[Close]
BLAST of Cucsa.383800 vs. TAIR10
Match: AT5G06070.1 (AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 4.0e-10
Identity = 27/42 (64.29%), Postives = 35/42 (83.33%), Query Frame = 1 

Query: 56 SYTCGFCKRQFQSAQALGGHMNVHRRDRAKLRRSLPLDSATN 98
          SY+C FC R+F+SAQALGGHMNVHRRDRA+L++     S+T+
Sbjct: 54 SYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTD 95

[Close]
BLAST of Cucsa.383800 vs. NCBI nr
Match: gi|778674150|ref|XP_011650145.1| (PREDICTED: zinc finger protein 3-like [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 1.2e-91
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1 

Query: 1   SSQGVQELRIITKPKMKPQLKAKASRKHNNKREGNQEEEEEKEIIVEFPWASSRASYTCG 60
           SSQGVQELRIITKPKMKPQLKAKASRKHNNKREGNQEEEEEKEIIVEFPWASSRASYTCG
Sbjct: 14  SSQGVQELRIITKPKMKPQLKAKASRKHNNKREGNQEEEEEKEIIVEFPWASSRASYTCG 73

Query: 61  FCKRQFQSAQALGGHMNVHRRDRAKLRRSLPLDSATNDDHHHDFHGSSSQPIKFLKLYDF 120
           FCKRQFQSAQALGGHMNVHRRDRAKLRRSLPLDSATNDDHHHDFHGSSSQPIKFLKLYDF
Sbjct: 74  FCKRQFQSAQALGGHMNVHRRDRAKLRRSLPLDSATNDDHHHDFHGSSSQPIKFLKLYDF 133

Query: 121 SSFHGEQADDQSDGGCQIWKKVNKFVKKETALLATSNDIDLELRLGF 168
           SSFHGEQADDQSDGGCQIWKKVNKFVKKETALLATSNDIDLELRLGF
Sbjct: 134 SSFHGEQADDQSDGGCQIWKKVNKFVKKETALLATSNDIDLELRLGF 180

[Close]
BLAST of Cucsa.383800 vs. NCBI nr
Match: gi|659130500|ref|XP_008465205.1| (PREDICTED: transcriptional regulator SUPERMAN [Cucumis melo])

HSP 1 Score: 312.0 bits (798), Expect = 6.4e-82
Identity = 159/169 (94.08%), Postives = 161/169 (95.27%), Query Frame = 1 

Query: 1   SSQGVQELRIITKPKMKPQLKAKASRKHNNKREGNQEEEE-EKEIIVEFPWASSRASYTC 60
           SS G QELRIITKPKMKPQLKAKAS KH+NKREG QEEEE EKEIIVEFPWASSRA YTC
Sbjct: 14  SSHGGQELRIITKPKMKPQLKAKASSKHSNKREGKQEEEEKEKEIIVEFPWASSRA-YTC 73

Query: 61  GFCKRQFQSAQALGGHMNVHRRDRAKLRRSLPLDSATNDDHHHDFHGSSSQPIKFLKLYD 120
           GFCKRQFQSAQALGGHMNVHRRDRAKLRRSLPLDSATNDDHHHDF GSSSQPIKFLKLYD
Sbjct: 74  GFCKRQFQSAQALGGHMNVHRRDRAKLRRSLPLDSATNDDHHHDFLGSSSQPIKFLKLYD 133

Query: 121 FSSFHGEQADDQSDGGCQIWKKVNKFV-KKETALLATSNDIDLELRLGF 168
           FSSFHGEQADDQSDGGC+IWKKVNKFV KKETALLATSNDIDLELRLGF
Sbjct: 134 FSSFHGEQADDQSDGGCKIWKKVNKFVKKKETALLATSNDIDLELRLGF 181

[Close]
BLAST of Cucsa.383800 vs. NCBI nr
Match: gi|947073066|gb|KRH21957.1| (hypothetical protein GLYMA_13G269400 [Glycine max])

HSP 1 Score: 79.7 bits (195), Expect = 5.3e-12
Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = 1 

Query: 28  HNNKREGNQEEEEEKEIIVEFPWASSRASYTCGFCKRQFQSAQALGGHMNVHRRDRAKLR 87
           +NN    N    ++ + +  FPW     SYTC FC+++F+SAQALGGHMNVHRRDRA+LR
Sbjct: 31  NNNNIHSNNNIADQNDYVNGFPWPPR--SYTCSFCRKEFRSAQALGGHMNVHRRDRARLR 90

Query: 88  RSLPLDSATNDDHHHDFHGSSSQPIKFLKL 118
           +S P        HH    G +  P+  L L
Sbjct: 91  QSSP------PTHHEVHQGQAQGPMLNLNL 112

[Close]
BLAST of Cucsa.383800 vs. NCBI nr
Match: gi|596290285|ref|XP_007226157.1| (hypothetical protein PRUPE_ppa015007mg [Prunus persica])

HSP 1 Score: 79.7 bits (195), Expect = 5.3e-12
Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = 1 

Query: 13 KPKMKPQLK--AKASRKHNNKREGNQEEEEEKEIIVEFPWASSRASYTCGFCKRQFQSAQ 72
          K ++   LK   +A R  NNKR  +  +  E++ I  F W     SYTC FCKR+F+SAQ
Sbjct: 3  KNRLSNNLKEHGRAIRDSNNKRIIHCSQSCEEDYINGFSWPPR--SYTCSFCKREFRSAQ 62

Query: 73 ALGGHMNVHRRDRAKLRRSLPLDS 95
          ALGGHMNVHR+DRA+L+ S P+D+
Sbjct: 63 ALGGHMNVHRKDRARLKNSPPIDA 84

[Close]
BLAST of Cucsa.383800 vs. NCBI nr
Match: gi|1009141006|ref|XP_015887959.1| (PREDICTED: transcriptional regulator SUPERMAN [Ziziphus jujuba])

HSP 1 Score: 79.7 bits (195), Expect = 5.3e-12
Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 1 

Query: 12  TKPKMKPQLKAKASRKH---NNKREGNQEEEEEKEIIVEFPWASSRASYTCGFCKRQFQS 71
           +K  M      KA+R H   N+  + N  +  E++ +  F W     SYTC FCKR+F+S
Sbjct: 26  SKTMMSNNQSNKAARDHSSWNSSCDNNHHQSYEEDYMNGFSWPPR--SYTCSFCKREFRS 85

Query: 72  AQALGGHMNVHRRDRAKLRRSLPLD 94
           AQALGGHMNVHR+DRA+LR+S P D
Sbjct: 86  AQALGGHMNVHRKDRARLRQSSPND 108

The following BLAST results are available for this feature:
BLAST of Cucsa.383800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SUP_ARATH4.5e-1155.93Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1[more]
RBE_ARATH7.2e-0964.29Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE... [more]
TAC1_ARATH1.2e-0869.23Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1[more]
LATE_ARATH2.0e-0636.47Protein LATE FLOWERING OS=Arabidopsis thaliana GN=LATE PE=2 SV=1[more]
BLAST of Cucsa.383800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNQ1_CUCSA8.0e-92100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G190780 PE=4 SV=1[more]
M5XPB2_PRUPE3.7e-1250.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015007mg PE=4 SV=1[more]
K7M271_SOYBN3.7e-1244.44Uncharacterized protein OS=Glycine max GN=GLYMA_13G269400 PE=4 SV=1[more]
A0A0B2RYH3_GLYSO3.7e-1244.44Transcriptional regulator SUPERMAN OS=Glycine soja GN=glysoja_001623 PE=4 SV=1[more]
A0A0K9PAL0_ZOSMR8.2e-1239.73Uncharacterized protein OS=Zostera marina GN=ZOSMA_32G00670 PE=4 SV=1[more]
BLAST of Cucsa.383800 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G42410.18.7e-1340.43 zinc finger protein 11[more]
AT3G53820.11.1e-1238.02 C2H2 and C2HC zinc fingers superfamily protein[more]
AT3G23130.12.5e-1255.93 C2H2 and C2HC zinc fingers superfamily protein[more]
AT2G37740.11.3e-1145.78 zinc-finger protein 10[more]
AT5G06070.14.0e-1064.29 C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of Cucsa.383800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778674150|ref|XP_011650145.1|1.2e-91100.00PREDICTED: zinc finger protein 3-like [Cucumis sativus][more]
gi|659130500|ref|XP_008465205.1|6.4e-8294.08PREDICTED: transcriptional regulator SUPERMAN [Cucumis melo][more]
gi|947073066|gb|KRH21957.1|5.3e-1244.44hypothetical protein GLYMA_13G269400 [Glycine max][more]
gi|596290285|ref|XP_007226157.1|5.3e-1250.00hypothetical protein PRUPE_ppa015007mg [Prunus persica][more]
gi|1009141006|ref|XP_015887959.1|5.3e-1248.24PREDICTED: transcriptional regulator SUPERMAN [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.383800.1Cucsa.383800.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PFAMPF13912zf-C2H2_6coord: 57..80
score: 1.
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 59..79
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 57..84
score: 10
NoneNo IPR availableunknownCoilCoilcoord: 21..41
scor
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 56..94
score: 7.0
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 55..83
score: 3.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.383800Cla007566Watermelon (97103) v1cgywmB691
Cucsa.383800Csa2G190780Cucumber (Chinese Long) v2cgycuB536
Cucsa.383800Csa3G141870Cucumber (Chinese Long) v2cgycuB537
Cucsa.383800MELO3C026785Melon (DHL92) v3.5.1cgymeB624
Cucsa.383800MELO3C006453Melon (DHL92) v3.5.1cgymeB625
Cucsa.383800ClCG06G006780Watermelon (Charleston Gray)cgywcgB654
Cucsa.383800CSPI03G12290Wild cucumber (PI 183967)cgycpiB566
Cucsa.383800CSPI02G10570Wild cucumber (PI 183967)cgycpiB565
Cucsa.383800CmaCh14G017900Cucurbita maxima (Rimu)cgycmaB1054
Cucsa.383800CmaCh08G010990Cucurbita maxima (Rimu)cgycmaB1059
Cucsa.383800CmoCh14G018270Cucurbita moschata (Rifu)cgycmoB1054
Cucsa.383800CmoCh19G000840Cucurbita moschata (Rifu)cgycmoB1056
Cucsa.383800Lsi05G009970Bottle gourd (USVL1VR-Ls)cgylsiB621
Cucsa.383800Lsi05G016940Bottle gourd (USVL1VR-Ls)cgylsiB620
Cucsa.383800Lsi09G012540Bottle gourd (USVL1VR-Ls)cgylsiB619
Cucsa.383800Cp4.1LG03g10150Cucurbita pepo (Zucchini)cgycpeB1010
Cucsa.383800Cp4.1LG15g00600Cucurbita pepo (Zucchini)cgycpeB1008
Cucsa.383800Cp4.1LG17g01800Cucurbita pepo (Zucchini)cgycpeB1009
Cucsa.383800MELO3C026785.2Melon (DHL92) v3.6.1cgymedB620
Cucsa.383800MELO3C006453.2Melon (DHL92) v3.6.1cgymedB621
Cucsa.383800CsaV3_2G012990Cucumber (Chinese Long) v3cgycucB581
Cucsa.383800CsaV3_3G012410Cucumber (Chinese Long) v3cgycucB582
Cucsa.383800Cla97C05G085440Watermelon (97103) v2cgywmbB657
Cucsa.383800Cla97C06G116390Watermelon (97103) v2cgywmbB658
Cucsa.383800Bhi12G001460Wax gourdcgywgoB762
Cucsa.383800Carg10948Silver-seed gourdcarcgyB1195
Cucsa.383800Carg16576Silver-seed gourdcarcgyB0277
Cucsa.383800Carg16865Silver-seed gourdcarcgyB0849
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cucsa.383800Cucsa.255130Cucumber (Gy14) v1cgycgyB133
The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.383800Cucurbita maxima (Rimu)cgycmaB1055
Cucsa.383800Cucurbita maxima (Rimu)cgycmaB1058
Cucsa.383800Cucurbita moschata (Rifu)cgycmoB1055
Cucsa.383800Cucurbita moschata (Rifu)cgycmoB1058
Cucsa.383800Cucurbita moschata (Rifu)cgycmoB1059
Cucsa.383800Watermelon (Charleston Gray)cgywcgB653
Cucsa.383800Watermelon (97103) v1cgywmB690
Cucsa.383800Cucurbita pepo (Zucchini)cgycpeB1007
Cucsa.383800Cucurbita pepo (Zucchini)cgycpeB1012
Cucsa.383800Silver-seed gourdcarcgyB0273
Cucsa.383800Silver-seed gourdcarcgyB1080