CmoCh14G018270 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh14G018270
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(C2H2 type zinc finger transcription factor family protein) (Zinc finger, C2H2-type)
Location	Cmo_Chr14 : 13912429 .. 13913346 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACACCACCATCAGCGGCGGAGGAGCACCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGGACCCAACGGGGCAGGGAAAAGCCAGAGAAACAAGGTGTGCAGGGCGGCGGCGGCGGCAGAGGAGGATTTCATAAATGGGATTTCATGGCCACCAAGAAGTTACACGTGCAACTTCTGCAAAAGGGAATTCAGATCGGCTCAAGCACTTGGCGGCCACATGAATGTCCATCGTAGAGATAGAGCCTTACTCTACTCTCCCCCTGCTGATCATACCCACTTCACAAATCTCAACCTTAACCTTCACCATAACCCTTTCCCTAATCGCCCCTTCAAAGCCTTGGAGATTGCCAAACCTAATAGGAACAAGCCCCACAAATTCATTGGTTTGGACATTGAAATCAACACTACCAATAACACTGCCACCCTAATTACTGAATCCAAGAAGAAGGACATTGATTTGGAGCTCCGATTAGGGTACTCAACTTAGAGATGACATGAAGTTGTGGTGTGGGAACATGTTCTTCAAATTTTTCTCCTACGTTGTGTTGAAATTAGAATATATTCAGCTTCTCCATCTCCCAATATCCACATTATTGTTTGCTTCTTTCACTCTTTCAATGTCTTTATTGGTTCATCTTTTTGTGTCTGATTTGAAGGATTCCATTTCTTTTCTGAATCAACTTGTCTGTACCTCCTTCATTTAGTGAGACTCTCATTAAAATCTCACAATATATAATATTATGCAATGTGTAATCTCCTCTTCCCTTCCCTCCCTTATCATGTCTTAACACTTAATTAACCAAATATCATCAAATTCAGTGCATATTCATTCTTTATAAGTGCTTCTATTGTGCCCTATTATCCATTGTGACCCCAATGTTATTTCTTATCATTTCATTCATAATCTAGATTTTGA

mRNA sequence

ATGAACACCACCATCAGCGGCGGAGGAGCACCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGGACCCAACGGGGCAGGGAAAAGCCAGAGAAACAAGGTGTGCAGGGCGGCGGCGGCGGCAGAGGAGGATTTCATAAATGGGATTTCATGGCCACCAAGAAGTTACACGTGCAACTTCTGCAAAAGGGAATTCAGATCGGCTCAAGCACTTGGCGGCCACATGAATGTCCATCGTAGAGATAGAGCCTTACTCTACTCTCCCCCTGCTGATCATACCCACTTCACAAATCTCAACCTTAACCTTCACCATAACCCTTTCCCTAATCGCCCCTTCAAAGCCTTGGAGATTGCCAAACCTAATAGGAACAAGCCCCACAAATTCATTGGTTTGGACATTGAAATCAACACTACCAATAACACTGCCACCCTAATTACTGAATCCAAGAAGAAGGACATTGATTTGGAGCTCCGATTAGGATTTTGA

Coding sequence (CDS)

ATGAACACCACCATCAGCGGCGGAGGAGCACCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGGACCCAACGGGGCAGGGAAAAGCCAGAGAAACAAGGTGTGCAGGGCGGCGGCGGCGGCAGAGGAGGATTTCATAAATGGGATTTCATGGCCACCAAGAAGTTACACGTGCAACTTCTGCAAAAGGGAATTCAGATCGGCTCAAGCACTTGGCGGCCACATGAATGTCCATCGTAGAGATAGAGCCTTACTCTACTCTCCCCCTGCTGATCATACCCACTTCACAAATCTCAACCTTAACCTTCACCATAACCCTTTCCCTAATCGCCCCTTCAAAGCCTTGGAGATTGCCAAACCTAATAGGAACAAGCCCCACAAATTCATTGGTTTGGACATTGAAATCAACACTACCAATAACACTGCCACCCTAATTACTGAATCCAAGAAGAAGGACATTGATTTGGAGCTCCGATTAGGATTTTGA

Homology

[Close]

BLAST of CmoCh14G018270 vs. Swiss-Prot
Match: SUP_ARATH (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 5.8e-16
Identity = 44/87 (50.57%), Postives = 53/87 (60.92%), Query Frame = 1


Query: 41  EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA---LLYSPPADHTHFTNL 100
           + D++ G SWPPRSYTC+FCKREFRSAQALGGHMNVHRRDRA   L  SP +  T     
Sbjct: 33  DHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPY 92

Query: 101 NLNLHHNPFPNRPFKALEIAKPNRNKP 125
                  P PN  +  +  + P  + P
Sbjct: 93  -------PNPNYSYSTMANSPPPHHSP 112

[Close]

BLAST of CmoCh14G018270 vs. Swiss-Prot
Match: RBE_ARATH (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-13
Identity = 37/51 (72.55%), Postives = 41/51 (80.39%), Query Frame = 1


Query: 35 RAAAAAEE-DFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL 85
          RA A+AEE     G  WPPRSY+C+FC REF+SAQALGGHMNVHRRDRA L
Sbjct: 34 RAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARL 84

[Close]

BLAST of CmoCh14G018270 vs. Swiss-Prot
Match: TAC1_ARATH (Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.7e-07
Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 1


Query: 53 RSYTCNFCKREFRSAQALGGHMNVHRRDRALL 85
          RSY C+FC R F +AQALGGHMN+HRRDRA L
Sbjct: 33 RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKL 64

[Close]

BLAST of CmoCh14G018270 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.1e-06
Identity = 19/32 (59.38%), Postives = 27/32 (84.38%), Query Frame = 1


Query: 52 PRSYTCNFCKREFRSAQALGGHMNVHRRDRAL 84
          PR ++CN+C+R+F S+QALGGH N H+R+R L
Sbjct: 65 PRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 96

[Close]

BLAST of CmoCh14G018270 vs. TrEMBL
Match: A0A0A0L9Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141870 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 7.3e-42
Identity = 109/168 (64.88%), Postives = 120/168 (71.43%), Query Frame = 1


Query: 19  GGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHR 78
           GGG N + KSQRNKVCRAA   EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHR
Sbjct: 23  GGGANPSVKSQRNKVCRAAT--EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHR 82

Query: 79  RDRALLYSPPADHTHFTNLNLNLHHNPFPN-----------RPFKALEIA--------KP 138
           RDRALLYSPPAD   FTNLNLNL HNP PN           R    L+++        KP
Sbjct: 83  RDRALLYSPPAD-GQFTNLNLNLLHNPNPNISSYDEVTFVGRKASDLKLSSMTTEIATKP 142

Query: 139 NR------NKPHKF-IGLDIEINTTNNTATLITESKKKDIDLELRLGF 161
           N        K  KF IGLDIEI+TT++T  ++T+S KKDIDLELRLG+
Sbjct: 143 NMFERGHWKKGEKFNIGLDIEISTTSST-NVLTDS-KKDIDLELRLGY 185

[Close]

BLAST of CmoCh14G018270 vs. TrEMBL
Match: M5XPB2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015007mg PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-21
Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 1


Query: 28  SQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA-LLYS 87
           S   ++   + + EED+ING SWPPRSYTC+FCKREFRSAQALGGHMNVHR+DRA L  S
Sbjct: 20  SNNKRIIHCSQSCEEDYINGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRKDRARLKNS 79

Query: 88  PPADHTHFT---NLNLNLHHNPFPN 109
           PP D  + +   NLNLNL  NP PN
Sbjct: 80  PPIDAQYTSTIFNLNLNLKPNPNPN 104

[Close]

BLAST of CmoCh14G018270 vs. TrEMBL
Match: A0A0B0PNB7_GOSAR (Transcriptional regulator SUPERMAN-like protein OS=Gossypium arboreum GN=F383_09382 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.1e-21
Identity = 74/173 (42.77%), Postives = 89/173 (51.45%), Query Frame = 1


Query: 42  EDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYS----PPADHTHFTN- 101
           ED+++G SWPPRSYTC+FCKREFRSAQALGGHMNVHRRDRA L      PP DH H  + 
Sbjct: 41  EDYLSGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRQSPPPPPKDHHHHHHG 100

Query: 102 ----LNLNLHHNPFPN-------------RPFKALEIAK------PNRNKP--------- 161
               LNLNL+ NP PN              P  +L  AK      P  +KP         
Sbjct: 101 QPPFLNLNLNPNPNPNFSPPSSLTLSTFPPPSPSLSPAKKWLFIDPLNSKPSDSRKGVER 160

[Close]

BLAST of CmoCh14G018270 vs. TrEMBL
Match: A0A0D2QZL7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G025300 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.1e-21
Identity = 74/173 (42.77%), Postives = 89/173 (51.45%), Query Frame = 1


Query: 42  EDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYS----PPADHTHFTN- 101
           ED+++G SWPPRSYTC+FCKREFRSAQALGGHMNVHRRDRA L      PP DH H  + 
Sbjct: 41  EDYLSGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRQSPPPPPKDHHHHHHG 100

Query: 102 ----LNLNLHHNPFPN-------------RPFKALEIAK------PNRNKP--------- 161
               LNLNL+ NP PN              P  +L  AK      P  +KP         
Sbjct: 101 QPPFLNLNLNPNPNPNFSPPSSLTLSTFPPPSPSLSPAKKWLFIDPLNSKPSDSRKGVER 160

[Close]

BLAST of CmoCh14G018270 vs. TrEMBL
Match: A0A061EM84_THECC (C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao GN=TCM_020818 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.1e-21
Identity = 52/73 (71.23%), Postives = 57/73 (78.08%), Query Frame = 1


Query: 42  EDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA-LLYSPPADHTHFTNLNLN 101
           ED++ G SWPPRSYTC+FCKREFRSAQALGGHMNVHRRDRA L  SPP DH     LNLN
Sbjct: 48  EDYLAGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRQSPPRDHGQPPCLNLN 107

Query: 102 LHHNPFPNRPFKA 114
           L+ NP PN  F +
Sbjct: 108 LYPNPNPNPNFSS 120

[Close]

BLAST of CmoCh14G018270 vs. TAIR10
Match: AT3G23130.1 (AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 3.2e-17
Identity = 44/87 (50.57%), Postives = 53/87 (60.92%), Query Frame = 1


Query: 41  EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA---LLYSPPADHTHFTNL 100
           + D++ G SWPPRSYTC+FCKREFRSAQALGGHMNVHRRDRA   L  SP +  T     
Sbjct: 33  DHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPY 92

Query: 101 NLNLHHNPFPNRPFKALEIAKPNRNKP 125
                  P PN  +  +  + P  + P
Sbjct: 93  -------PNPNYSYSTMANSPPPHHSP 112

[Close]

BLAST of CmoCh14G018270 vs. TAIR10
Match: AT2G37740.1 (AT2G37740.1 zinc-finger protein 10)

HSP 1 Score: 80.9 bits (198), Expect = 8.0e-16
Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 1


Query: 27 KSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL 85
          KS +       A AE+D    + WPPRSYTC+FC+REF+SAQALGGHMNVHRRDRA L
Sbjct: 12 KSNKESSWEELAFAEDDAAGSL-WPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARL 68

[Close]

BLAST of CmoCh14G018270 vs. TAIR10
Match: AT2G42410.1 (AT2G42410.1 zinc finger protein 11)

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-15
Identity = 46/112 (41.07%), Postives = 60/112 (53.57%), Query Frame = 1


Query: 48  ISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPA------DHTHFTNLNLNL 107
           I WPP++YTC+FC+REFRSAQALGGHMNVHRRDRA L   P+       HT   N N N 
Sbjct: 42  IPWPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNF 101

Query: 108 HHNPFPNRPFKALEIAKPN---RNKPHKFIGLDIEINTTNNTATLITESKKK 151
             +   +     LE +  N   +  P      D+  +TT+    ++   K K
Sbjct: 102 SSSSSSSTTTAHLEPSLTNQRSKTTPFPSARFDLLDSTTSYGGLMMDREKNK 153

[Close]

BLAST of CmoCh14G018270 vs. TAIR10
Match: AT5G06070.1 (AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14
Identity = 37/51 (72.55%), Postives = 41/51 (80.39%), Query Frame = 1


Query: 35 RAAAAAEE-DFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL 85
          RA A+AEE     G  WPPRSY+C+FC REF+SAQALGGHMNVHRRDRA L
Sbjct: 34 RAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARL 84

[Close]

BLAST of CmoCh14G018270 vs. TAIR10
Match: AT4G17810.1 (AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 75.5 bits (184), Expect = 3.4e-14
Identity = 41/71 (57.75%), Postives = 48/71 (67.61%), Query Frame = 1


Query: 15 GGGGGGGPNGAGKSQRNKVCRAAAAAEEDF---INGISWPPRSYTCNFCKREFRSAQALG 74
          GG     PN   + + +       A E+D    I+G +WPPRSYTCNFC+REFRSAQALG
Sbjct: 3  GGAWMWNPNKIEELEDDDESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQALG 62

Query: 75 GHMNVHRRDRA 83
          GHMNVHRRDRA
Sbjct: 63 GHMNVHRRDRA 73

[Close]

BLAST of CmoCh14G018270 vs. NCBI nr
Match: gi|449433271|ref|XP_004134421.1| (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 1.0e-41
Identity = 109/168 (64.88%), Postives = 120/168 (71.43%), Query Frame = 1


Query: 19  GGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHR 78
           GGG N + KSQRNKVCRAA   EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHR
Sbjct: 23  GGGANPSVKSQRNKVCRAAT--EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHR 82

Query: 79  RDRALLYSPPADHTHFTNLNLNLHHNPFPN-----------RPFKALEIA--------KP 138
           RDRALLYSPPAD   FTNLNLNL HNP PN           R    L+++        KP
Sbjct: 83  RDRALLYSPPAD-GQFTNLNLNLLHNPNPNISSYDEVTFVGRKASDLKLSSMTTEIATKP 142

Query: 139 NR------NKPHKF-IGLDIEINTTNNTATLITESKKKDIDLELRLGF 161
           N        K  KF IGLDIEI+TT++T  ++T+S KKDIDLELRLG+
Sbjct: 143 NMFERGHWKKGEKFNIGLDIEISTTSST-NVLTDS-KKDIDLELRLGY 185

[Close]

BLAST of CmoCh14G018270 vs. NCBI nr
Match: gi|659076212|ref|XP_008438560.1| (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 3.0e-41
Identity = 106/170 (62.35%), Postives = 113/170 (66.47%), Query Frame = 1


Query: 19  GGGPNGAGKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHR 78
           GGG N + KSQRNKVCRAA   EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHR
Sbjct: 23  GGGANPSVKSQRNKVCRAAT--EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHR 82

Query: 79  RDRALLYSPPADHTHFTNLNLNLHHNPFPNRPFKALE---------------------IA 138
           RDRALLYSPPAD   FTNLNLNL HNP PN    + +                      A
Sbjct: 83  RDRALLYSPPAD-GQFTNLNLNLLHNPNPNPNISSYDEVTFVGRKASDLKLSSMTAEIAA 142

Query: 139 KPNR------NKPHKF-IGLDIEINTTNNTATLITESKKKDIDLELRLGF 161
           KPN        K  KF IGLDIEI+TT++T  L     K DIDLELRLG+
Sbjct: 143 KPNMFERGHWKKGEKFNIGLDIEISTTSSTNVL--NDSKMDIDLELRLGY 187

[Close]

BLAST of CmoCh14G018270 vs. NCBI nr
Match: gi|596290285|ref|XP_007226157.1| (hypothetical protein PRUPE_ppa015007mg [Prunus persica])

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-21
Identity = 54/85 (63.53%), Postives = 63/85 (74.12%), Query Frame = 1


Query: 28  SQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA-LLYS 87
           S   ++   + + EED+ING SWPPRSYTC+FCKREFRSAQALGGHMNVHR+DRA L  S
Sbjct: 20  SNNKRIIHCSQSCEEDYINGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRKDRARLKNS 79

Query: 88  PPADHTHFT---NLNLNLHHNPFPN 109
           PP D  + +   NLNLNL  NP PN
Sbjct: 80  PPIDAQYTSTIFNLNLNLKPNPNPN 104

[Close]

BLAST of CmoCh14G018270 vs. NCBI nr
Match: gi|823138351|ref|XP_012469045.1| (PREDICTED: transcriptional regulator SUPERMAN-like [Gossypium raimondii])

HSP 1 Score: 109.4 bits (272), Expect = 6.0e-21
Identity = 74/173 (42.77%), Postives = 89/173 (51.45%), Query Frame = 1


Query: 42  EDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYS----PPADHTHFTN- 101
           ED+++G SWPPRSYTC+FCKREFRSAQALGGHMNVHRRDRA L      PP DH H  + 
Sbjct: 41  EDYLSGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRQSPPPPPKDHHHHHHG 100

Query: 102 ----LNLNLHHNPFPN-------------RPFKALEIAK------PNRNKP--------- 161
               LNLNL+ NP PN              P  +L  AK      P  +KP         
Sbjct: 101 QPPFLNLNLNPNPNPNFSPPSSLTLSTFPPPSPSLSPAKKWLFIDPLNSKPSDSRKGVER 160

[Close]

BLAST of CmoCh14G018270 vs. NCBI nr
Match: gi|728846874|gb|KHG26317.1| (Transcriptional regulator SUPERMAN -like protein [Gossypium arboreum])

HSP 1 Score: 109.4 bits (272), Expect = 6.0e-21
Identity = 74/173 (42.77%), Postives = 89/173 (51.45%), Query Frame = 1


Query: 42  EDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYS----PPADHTHFTN- 101
           ED+++G SWPPRSYTC+FCKREFRSAQALGGHMNVHRRDRA L      PP DH H  + 
Sbjct: 41  EDYLSGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRQSPPPPPKDHHHHHHG 100

Query: 102 ----LNLNLHHNPFPN-------------RPFKALEIAK------PNRNKP--------- 161
               LNLNL+ NP PN              P  +L  AK      P  +KP         
Sbjct: 101 QPPFLNLNLNPNPNPNFSPPSSLTLSTFPPPSPSLSPAKKWLFIDPLNSKPSDSRKGVER 160

The following BLAST results are available for this feature:

BLAST of CmoCh14G018270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SUP_ARATH	5.8e-16	50.57	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1	[more]
RBE_ARATH	2.7e-13	72.55	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE...	[more]
TAC1_ARATH	3.7e-07	75.00	Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1	[more]
ZFP1_ARATH	7.1e-06	59.38	Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1	[more]

BLAST of CmoCh14G018270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9Y8_CUCSA	7.3e-42	64.88	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141870 PE=4 SV=1	[more]
M5XPB2_PRUPE	1.4e-21	63.53	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015007mg PE=4 SV=1	[more]
A0A0B0PNB7_GOSAR	4.1e-21	42.77	Transcriptional regulator SUPERMAN-like protein OS=Gossypium arboreum GN=F383_09...	[more]
A0A0D2QZL7_GOSRA	4.1e-21	42.77	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G025300 PE=4 SV=1	[more]
A0A061EM84_THECC	7.1e-21	71.23	C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao GN=T...	[more]

BLAST of CmoCh14G018270 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G23130.1	3.2e-17	50.57	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G37740.1	8.0e-16	63.79	zinc-finger protein 10	[more]
AT2G42410.1	2.3e-15	41.07	zinc finger protein 11	[more]
AT5G06070.1	1.5e-14	72.55	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT4G17810.1	3.4e-14	57.75	C2H2 and C2HC zinc fingers superfamily protein	[more]

BLAST of CmoCh14G018270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449433271\|ref\|XP_004134421.1\|	1.0e-41	64.88	PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis sativus]	[more]
gi\|659076212\|ref\|XP_008438560.1\|	3.0e-41	62.35	PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo]	[more]
gi\|596290285\|ref\|XP_007226157.1\|	2.0e-21	63.53	hypothetical protein PRUPE_ppa015007mg [Prunus persica]	[more]
gi\|823138351\|ref\|XP_012469045.1\|	6.0e-21	42.77	PREDICTED: transcriptional regulator SUPERMAN-like [Gossypium raimondii]	[more]
gi\|728846874\|gb\|KHG26317.1\|	6.0e-21	42.77	Transcriptional regulator SUPERMAN -like protein [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2
IPR013087	Znf_C2H2_type
IPR015880	Zinc finger, C2H2-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G018270.1	CmoCh14G018270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PFAM	PF13912	zf-C2H2_6	coord: 55..78 score: 1.
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 57..77 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 55..82 score: 11
IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain	GENE3D	G3DSA:3.30.160.60		coord: 53..79 score: 4.
IPR015880	Zinc finger, C2H2-like	SMART	SM00355	c2h2final6	coord: 55..77 score: 0.
None	No IPR available	PANTHER	PTHR26374	FAMILY NOT NAMED	coord: 39..108 score: 3.2
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 52..82 score: 5.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh14G018270	Cucsa.255130	Cucumber (Gy14) v1	cgycmoB0700
CmoCh14G018270	Cucsa.383800	Cucumber (Gy14) v1	cgycmoB1054
CmoCh14G018270	CmaCh14G017900	Cucurbita maxima (Rimu)	cmacmoB245
CmoCh14G018270	CmaCh08G010990	Cucurbita maxima (Rimu)	cmacmoB883
CmoCh14G018270	Cla005998	Watermelon (97103) v1	cmowmB223
CmoCh14G018270	Cla021552	Watermelon (97103) v1	cmowmB231
CmoCh14G018270	Cla007566	Watermelon (97103) v1	cmowmB239
CmoCh14G018270	Csa3G141870	Cucumber (Chinese Long) v2	cmocuB239
CmoCh14G018270	Csa2G190780	Cucumber (Chinese Long) v2	cmocuB225
CmoCh14G018270	MELO3C006453	Melon (DHL92) v3.5.1	cmomeB230
CmoCh14G018270	MELO3C026785	Melon (DHL92) v3.5.1	cmomeB221
CmoCh14G018270	ClCG07G000860	Watermelon (Charleston Gray)	cmowcgB227
CmoCh14G018270	ClCG06G006780	Watermelon (Charleston Gray)	cmowcgB221
CmoCh14G018270	CSPI02G10570	Wild cucumber (PI 183967)	cmocpiB228
CmoCh14G018270	CSPI03G12290	Wild cucumber (PI 183967)	cmocpiB243
CmoCh14G018270	Lsi05G016940	Bottle gourd (USVL1VR-Ls)	cmolsiB233
CmoCh14G018270	Cp4.1LG03g10150	Cucurbita pepo (Zucchini)	cmocpeB245
CmoCh14G018270	MELO3C006453.2	Melon (DHL92) v3.6.1	cmomedB260
CmoCh14G018270	CsaV3_3G012410	Cucumber (Chinese Long) v3	cmocucB0283
CmoCh14G018270	Cla97C05G085440	Watermelon (97103) v2	cmowmbB243
CmoCh14G018270	BhiUN425G2	Wax gourd	cmowgoB0342
CmoCh14G018270	CsGy3G012420	Cucumber (Gy14) v2	cgybcmoB290
CmoCh14G018270	Carg16576	Silver-seed gourd	carcmoB0328
CmoCh14G018270	Carg10948	Silver-seed gourd	carcmoB1443

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh14G018270	CmoCh19G000840	Cucurbita moschata (Rifu)	cmocmoB207
CmoCh14G018270	CmoCh02G018050	Cucurbita moschata (Rifu)	cmocmoB213
CmoCh14G018270	CmoCh08G010730	Cucurbita moschata (Rifu)	cmocmoB233

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh14G018270	Watermelon (97103) v2	cmowmbB246
CmoCh14G018270	Watermelon (97103) v2	cmowmbB253
CmoCh14G018270	Wax gourd	cmowgoB0299
CmoCh14G018270	Wax gourd	cmowgoB0333
CmoCh14G018270	Cucurbita moschata (Rifu)	cmocmoB198
CmoCh14G018270	Cucurbita moschata (Rifu)	cmocmoB224
CmoCh14G018270	Cucurbita maxima (Rimu)	cmacmoB011
CmoCh14G018270	Cucurbita maxima (Rimu)	cmacmoB350
CmoCh14G018270	Cucurbita maxima (Rimu)	cmacmoB797
CmoCh14G018270	Watermelon (Charleston Gray)	cmowcgB219
CmoCh14G018270	Cucurbita pepo (Zucchini)	cmocpeB223
CmoCh14G018270	Cucurbita pepo (Zucchini)	cmocpeB230
CmoCh14G018270	Cucurbita pepo (Zucchini)	cmocpeB254
CmoCh14G018270	Bottle gourd (USVL1VR-Ls)	cmolsiB213
CmoCh14G018270	Bottle gourd (USVL1VR-Ls)	cmolsiB235
CmoCh14G018270	Cucumber (Gy14) v2	cgybcmoB181
CmoCh14G018270	Melon (DHL92) v3.6.1	cmomedB250
CmoCh14G018270	Silver-seed gourd	carcmoB0319
CmoCh14G018270	Silver-seed gourd	carcmoB1049
CmoCh14G018270	Silver-seed gourd	carcmoB1284
CmoCh14G018270	Cucumber (Chinese Long) v3	cmocucB0267
CmoCh14G018270	Cucumber (Chinese Long) v3	cmocucB0269