ClCG07G000860 (gene) Watermelon (Charleston Gray)

Overview
NameClCG07G000860
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
Descriptionzinc finger protein 11 LENGTH=214
LocationCG_Chr07 : 923360 .. 923914 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAATGGAGCTTATATGAGCAACAATGGGAAGCAACAAGAACAACAACAACAATGGGGTTATGTAAAAGAAGAAACTTTTTCAAGCAATAATCAGTTTCAATGGCCAGCAAAAAATTATGGTTGTAATTTTTGCAAGAGGGAATTCAAGTCAGCTCAAGCTCTTGGTGGGCATATGAATGTTCATAGAAGGGATAGAGCAAGAATGAGACTTTTGCCTTCTTGGGTGGCTGATAATAATAATAATAATTATTATTCTTACCCTAACCCTAATTTTTCTAATTTCTCACCATCTTGTTTCACTTTCAGATCATCAAATAAAAATTCTTTGTCTTCTTCCTCACAAGATCAAGAGAAGAAAGCAATTGGGAGTTGTTCATGGAACAATAATTACAAGCCTTCATTAGCCCCTCATGATCAAGAACATGTTGATGATGAAGTTCTTCATGTGTTGAAGAAAAAGAAGAAAAATTTGGTTAATTTAGACCTGAAGATGGGCAATTTGGGAGATGATTCTTCAAATGAGGATCTGGATTTGGAGCTACATCTTTGA

mRNA sequence

ATGGATAATGGAGCTTATATGAGCAACAATGGGAAGCAACAAGAACAACAACAACAATGGGGTTATGTAAAAGAAGAAACTTTTTCAAGCAATAATCAGTTTCAATGGCCAGCAAAAAATTATGGTTGTAATTTTTGCAAGAGGGAATTCAAGTCAGCTCAAGCTCTTGGTGGGCATATGAATGTTCATAGAAGGGATAGAGCAAGAATGAGACTTTTGCCTTCTTGGGTGGCTGATAATAATAATAATAATTATTATTCTTACCCTAACCCTAATTTTTCTAATTTCTCACCATCTTGTTTCACTTTCAGATCATCAAATAAAAATTCTTTGTCTTCTTCCTCACAAGATCAAGAGAAGAAAGCAATTGGGAGTTGTTCATGGAACAATAATTACAAGCCTTCATTAGCCCCTCATGATCAAGAACATGTTGATGATGAAGTTCTTCATGTGTTGAAGAAAAAGAAGAAAAATTTGGTTAATTTAGACCTGAAGATGGGCAATTTGGGAGATGATTCTTCAAATGAGGATCTGGATTTGGAGCTACATCTTTGA

Coding sequence (CDS)

ATGGATAATGGAGCTTATATGAGCAACAATGGGAAGCAACAAGAACAACAACAACAATGGGGTTATGTAAAAGAAGAAACTTTTTCAAGCAATAATCAGTTTCAATGGCCAGCAAAAAATTATGGTTGTAATTTTTGCAAGAGGGAATTCAAGTCAGCTCAAGCTCTTGGTGGGCATATGAATGTTCATAGAAGGGATAGAGCAAGAATGAGACTTTTGCCTTCTTGGGTGGCTGATAATAATAATAATAATTATTATTCTTACCCTAACCCTAATTTTTCTAATTTCTCACCATCTTGTTTCACTTTCAGATCATCAAATAAAAATTCTTTGTCTTCTTCCTCACAAGATCAAGAGAAGAAAGCAATTGGGAGTTGTTCATGGAACAATAATTACAAGCCTTCATTAGCCCCTCATGATCAAGAACATGTTGATGATGAAGTTCTTCATGTGTTGAAGAAAAAGAAGAAAAATTTGGTTAATTTAGACCTGAAGATGGGCAATTTGGGAGATGATTCTTCAAATGAGGATCTGGATTTGGAGCTACATCTTTGA

Protein sequence

MDNGAYMSNNGKQQEQQQQWGYVKEETFSSNNQFQWPAKNYGCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWVADNNNNNYYSYPNPNFSNFSPSCFTFRSSNKNSLSSSSQDQEKKAIGSCSWNNNYKPSLAPHDQEHVDDEVLHVLKKKKKNLVNLDLKMGNLGDDSSNEDLDLELHL
Homology
[Close]
BLAST of ClCG07G000860 vs. Swiss-Prot
Match: SUP_ARATH (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.2e-18
Identity = 64/206 (31.07%), Postives = 97/206 (47.09%), Query Frame = 1 

Query: 3   NGAYMSNNGKQQEQQQQWGYVKEETFSSNNQ----FQWPAKNYGCNFCKREFKSAQALGG 62
           N   + N+   + +   W Y   +    ++     F WP ++Y C+FCKREF+SAQALGG
Sbjct: 5   NSIELRNSFYGRARTSPWSYGDYDNCQQDHDYLLGFSWPPRSYTCSFCKREFRSAQALGG 64

Query: 63  HMNVHRRDRARMRLLPSWVADNNNNNYYSYPNPNFSNFS--------------------P 122
           HMNVHRRDRAR+RL  S    +++     YPNPN+S  +                    P
Sbjct: 65  HMNVHRRDRARLRLQQS--PSSSSTPSPPYPNPNYSYSTMANSPPPHHSPLTLFPTLSPP 124

Query: 123 SCFTFRSSNKNSLSSSSQDQEKKAIGSCSWNNNYKPSLAPHDQEHVDDEVLHVLKKKKKN 182
           S   +R+    SLS  S+   + A   C    +     A         +   +L+  +  
Sbjct: 125 SSPRYRAGLIRSLSPKSKHTPENA---CKTKKSSLLVEAGEATRFTSKDACKILRNDE-- 184

Query: 183 LVNLDLKMGNLGDDSSNEDLDLELHL 185
           +++L+L++G + +  S +DLDLEL L
Sbjct: 185 IISLELEIGLINE--SEQDLDLELRL 201

[Close]
BLAST of ClCG07G000860 vs. Swiss-Prot
Match: RBE_ARATH (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-12
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 1 

Query: 20 WGYVKEETFSSNNQF------QWPAKNYGCNFCKREFKSAQALGGHMNVHRRDRARMR 72
          W + +E  F+S  ++       WP ++Y C+FC REFKSAQALGGHMNVHRRDRAR++
Sbjct: 28 WPFREERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLK 85

[Close]
BLAST of ClCG07G000860 vs. Swiss-Prot
Match: TAC1_ARATH (Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.6e-07
Identity = 22/34 (64.71%), Postives = 28/34 (82.35%), Query Frame = 1 

Query: 38 AKNYGCNFCKREFKSAQALGGHMNVHRRDRARMR 72
          +++Y C+FC R F +AQALGGHMN+HRRDRA++R
Sbjct: 32 SRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLR 65

[Close]
BLAST of ClCG07G000860 vs. Swiss-Prot
Match: GIS_ARATH (Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.8e-06
Identity = 30/93 (32.26%), Postives = 51/93 (54.84%), Query Frame = 1 

Query: 6   YMSNNGKQQEQQQQWG--YVKEETFSSNNQFQWPAKNYGCNFCKREFKSAQALGGHMNVH 65
           Y + N +++E++ Q G       + S N +F+       C++C R F ++QALGGH N H
Sbjct: 61  YQTKNKEEEEEEDQTGDNSTDNNSISHNRRFE-------CHYCFRNFPTSQALGGHQNAH 120

Query: 66  RRDRARMRLLPSWVADNNNNNYYSYPN-PNFSN 96
           +R+R   +   S    + +NN YSY + P+++N
Sbjct: 121 KRERQLAKRGVSSYFYHPDNNPYSYRHYPSWTN 146

[Close]
BLAST of ClCG07G000860 vs. TrEMBL
Match: A0A0A0L7I0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G392775 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 5.9e-80
Identity = 161/197 (81.73%), Postives = 171/197 (86.80%), Query Frame = 1 

Query: 1   MDNGAYMSNN---GKQQEQQQQWGYVKEETFSSNNQFQWPAKNYGCNFCKREFKSAQALG 60
           MDNGAYM+NN   GKQQ+QQQQ GY KE TFSSN +FQWPAKNYGCNFCKREFKSAQALG
Sbjct: 33  MDNGAYMNNNTNNGKQQQQQQQRGYAKEGTFSSN-EFQWPAKNYGCNFCKREFKSAQALG 92

Query: 61  GHMNVHRRDRARMRLLPSWVADNN-NNNYYSYPNPNFSNFSPSCFTFR-SSNKNSLSSSS 120
           GHMNVHRRDRARMRLLPSWV+DNN NNNYYS PNPNFSNFSPSCF FR SSNKNSL SS 
Sbjct: 93  GHMNVHRRDRARMRLLPSWVSDNNYNNNYYSCPNPNFSNFSPSCFNFRSSSNKNSLCSSL 152

Query: 121 QDQEKKAIGSCSWNNN-YKPS--LAPH-DQEHVD---DEVLHVLKKKKKNLVNLDLKMGN 180
           QDQ+KK IGSCSWNNN YKPS  + PH DQEHVD   D+VLHV KKKKK +VNL+LKMG+
Sbjct: 153 QDQDKKEIGSCSWNNNIYKPSSLVVPHDDQEHVDDDADQVLHVFKKKKKGMVNLELKMGS 212

Query: 181 LGDDSS-NEDLDLELHL 185
           LGD SS NEDLDLELHL
Sbjct: 213 LGDASSNNEDLDLELHL 228

[Close]
BLAST of ClCG07G000860 vs. TrEMBL
Match: V4S3L8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006961mg PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.7e-23
Identity = 87/211 (41.23%), Postives = 111/211 (52.61%), Query Frame = 1 

Query: 3   NGAYMSNNGK------QQEQQQQWGYVKEETFSSNNQFQWPAKNYGCNFCKREFKSAQAL 62
           NG    N+G       QQ QQQ +G   EE  S    F WP ++Y C+FCKREF+SAQAL
Sbjct: 28  NGYNNQNSGNKMKDSCQQRQQQSYG---EEYLSG---FSWPPRSYTCSFCKREFRSAQAL 87

Query: 63  GGHMNVHRRDRARMRLLPSWVAD---NNNNNYYSY--------------PNPNFSNFSPS 122
           GGHMNVHRRDRAR+R+ P    D   NNN N   Y              PNPNFS   P 
Sbjct: 88  GGHMNVHRRDRARLRISPPTPKDIIVNNNINNGQYPLLNLNLNPNPNPNPNPNFST-PPL 147

Query: 123 CFTFRSSNKNSLSSSSQDQEKKAI-GSCSWNNNYKP-----SLAPHDQEHVDDEVLHVLK 182
              F S +  S +SSS+ ++  A+ G+ S  ++ K      S A       +++    L 
Sbjct: 148 VSPFSSFSSQSSASSSEIKKWSALTGALSPKDSVKKNEKSFSGAKEFGGFTEEDDGFKLS 207

Query: 183 KKKKNLVNLDLKMGNLGDDSSNEDLDLELHL 185
           KK   +V LDL++G + D  S EDLDLEL L
Sbjct: 208 KKGGEIVRLDLEIGVISD--SKEDLDLELRL 229

[Close]
BLAST of ClCG07G000860 vs. TrEMBL
Match: M5VLU7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb024794mg PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.0e-20
Identity = 73/184 (39.67%), Postives = 94/184 (51.09%), Query Frame = 1 

Query: 36  WPAKNYGCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWVADN---NNNNYYSYPNPN 95
           W AKNY C+FCKREF+SAQALGGHMNVHRRDRAR+RLLP  ++     +N N  SY +P+
Sbjct: 18  WAAKNYACSFCKREFRSAQALGGHMNVHRRDRARLRLLPPSLSSEICPHNPNPSSYFSPS 77

Query: 96  FSNFS-------------PSCFTFRSSNKNSLSS--SSQDQEKKAIGSCSWNNNYKPSLA 155
            S+ S              SC +  S +  +L S  SS D  KK     +   N+ P+L 
Sbjct: 78  SSSSSSSLSSSKGLPHNYSSCHSLLSPSLRALMSATSSTDGNKKPKFKYNSPQNHVPNLI 137

Query: 156 PHDQEH--VDDEVLHVLK-----------------KKKKNLVNLDLKMGNLGDDSSNEDL 183
           P   +   VD E   +LK                 KK+ N++ LDL MG   D     DL
Sbjct: 138 PKKGKRGAVDHEAGEILKGFAQKDLDDEFNKVDDLKKESNIIRLDLDMGFFKDHKEEVDL 197

[Close]
BLAST of ClCG07G000860 vs. TrEMBL
Match: V4M5I6_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021992mg PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-19
Identity = 73/204 (35.78%), Postives = 101/204 (49.51%), Query Frame = 1 

Query: 3   NGAYMSNNGKQQEQQQQWGYVKEETFSSNNQ----FQWPAKNYGCNFCKREFKSAQALGG 62
           N   + NN   + +   W Y   + +  +++    F WP ++Y C+FCKREF+SAQALGG
Sbjct: 5   NNIELRNNFYGRSRTSTWSYGDYDNYQQDHEYLLGFSWPPRSYTCSFCKREFRSAQALGG 64

Query: 63  HMNVHRRDRARMRLLPSWVADNNNNNYYSYPNPNFSNFS-----------------PSCF 122
           HMNVHRRDRAR+RL  S  + +++     YPNPN+S  S                 PS  
Sbjct: 65  HMNVHRRDRARLRLQQS--SSSSSTPSPPYPNPNYSYSSMATSPTPPLTLFPTVSPPSSP 124

Query: 123 TFRSSNKNSLSSSSQDQEKKAIGSCSWNNNYKPSLAPHDQEHVDDEVLHVLK-KKKKNLV 182
            +RS    SLS  S+   +    SC      KP L    +E          K  K    +
Sbjct: 125 GYRSCLARSLSPKSKHLPE---NSC---ETMKPYLVVEAEEAKRLSKKDACKFSKNGEFI 184

Query: 183 NLDLKMGNLGDDSSNEDLDLELHL 185
           +LDL++G + +  S EDLDLEL L
Sbjct: 185 SLDLEIGLINE--SEEDLDLELRL 198

[Close]
BLAST of ClCG07G000860 vs. TrEMBL
Match: A0A068TT60_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026243001 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.6e-19
Identity = 72/201 (35.82%), Postives = 102/201 (50.75%), Query Frame = 1 

Query: 2   DNGAYMSNNGKQQEQQQQWGYVKE----ETFSSNNQFQWPAKNYGCNFCKREFKSAQALG 61
           +N ++  N G  + +   W ++ +    E       F WP ++Y C+FCKREF+SAQALG
Sbjct: 3   NNNSHKKNAGCYKVKNPPWDFLNDCNGTEEADLLGLFSWPPRSYSCSFCKREFRSAQALG 62

Query: 62  GHMNVHRRDRARMRLLPSWVADNNNNNYYSYPNPNFSNF----SPSC------FTFRSSN 121
           GHMNVHRRDRAR+R  P      +  N    PNPNFS F    SPS        TF S  
Sbjct: 63  GHMNVHRRDRARLRQSPPRDGQYSLLNLNLEPNPNFSTFNTNPSPSARCPLMPSTFPSPI 122

Query: 122 KNSLSSSSQDQEKKAIGSCSWNNN----YKPSLAPHDQEHVDDEVLHVLKKKKKNLVNLD 181
              +S+ S        G   W +      K  L  H++E     +L     K+ ++V L+
Sbjct: 123 PPPVSTISTTPPATVTGMRIWGDKDGGATKRLLELHEKE---GSLL-----KRGDIVKLE 182

Query: 182 LKMGNLGDDSSNEDLDLELHL 185
           L++G +G+  + +DLDLEL L
Sbjct: 183 LEIGLVGE--AKQDLDLELRL 193

[Close]
BLAST of ClCG07G000860 vs. TAIR10
Match: AT2G42410.1 (AT2G42410.1 zinc finger protein 11)

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-21
Identity = 48/104 (46.15%), Postives = 65/104 (62.50%), Query Frame = 1 

Query: 5   AYMSNNGKQQEQQQQWGYVKEETFSSNNQ------FQWPAKNYGCNFCKREFKSAQALGG 64
           A  SN  K QE++ + G        ++ +        WP KNY C+FC+REF+SAQALGG
Sbjct: 7   ASFSNRDKTQEEEGEDGNGDNRVIMNHYKNYEAGLIPWPPKNYTCSFCRREFRSAQALGG 66

Query: 65  HMNVHRRDRARMRLLPSWVADNNNNNYYSYPNPNFSNFSPSCFT 103
           HMNVHRRDRA++R +PSW+ + +++   + PNPNFS+ S S  T
Sbjct: 67  HMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFSSSSSSSTT 110

[Close]
BLAST of ClCG07G000860 vs. TAIR10
Match: AT3G23130.1 (AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 91.7 bits (226), Expect = 5.2e-19
Identity = 64/206 (31.07%), Postives = 97/206 (47.09%), Query Frame = 1 

Query: 3   NGAYMSNNGKQQEQQQQWGYVKEETFSSNNQ----FQWPAKNYGCNFCKREFKSAQALGG 62
           N   + N+   + +   W Y   +    ++     F WP ++Y C+FCKREF+SAQALGG
Sbjct: 5   NSIELRNSFYGRARTSPWSYGDYDNCQQDHDYLLGFSWPPRSYTCSFCKREFRSAQALGG 64

Query: 63  HMNVHRRDRARMRLLPSWVADNNNNNYYSYPNPNFSNFS--------------------P 122
           HMNVHRRDRAR+RL  S    +++     YPNPN+S  +                    P
Sbjct: 65  HMNVHRRDRARLRLQQS--PSSSSTPSPPYPNPNYSYSTMANSPPPHHSPLTLFPTLSPP 124

Query: 123 SCFTFRSSNKNSLSSSSQDQEKKAIGSCSWNNNYKPSLAPHDQEHVDDEVLHVLKKKKKN 182
           S   +R+    SLS  S+   + A   C    +     A         +   +L+  +  
Sbjct: 125 SSPRYRAGLIRSLSPKSKHTPENA---CKTKKSSLLVEAGEATRFTSKDACKILRNDE-- 184

Query: 183 LVNLDLKMGNLGDDSSNEDLDLELHL 185
           +++L+L++G + +  S +DLDLEL L
Sbjct: 185 IISLELEIGLINE--SEQDLDLELRL 201

[Close]
BLAST of ClCG07G000860 vs. TAIR10
Match: AT4G17810.1 (AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 75.1 bits (183), Expect = 5.0e-14
Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 1 

Query: 1  MDNGAYMSNNGKQQEQQ---QQWGY--VKEETFSSNNQFQWPAKNYGCNFCKREFKSAQA 60
          M+ GA+M N  K +E +   + W     +++T  + +   WP ++Y CNFC+REF+SAQA
Sbjct: 1  MNGGAWMWNPNKIEELEDDDESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQA 60

Query: 61 LGGHMNVHRRDRARMR 72
          LGGHMNVHRRDRA  R
Sbjct: 61 LGGHMNVHRRDRASSR 76

[Close]
BLAST of ClCG07G000860 vs. TAIR10
Match: AT5G06070.1 (AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 74.3 bits (181), Expect = 8.6e-14
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 1 

Query: 20 WGYVKEETFSSNNQF------QWPAKNYGCNFCKREFKSAQALGGHMNVHRRDRARMR 72
          W + +E  F+S  ++       WP ++Y C+FC REFKSAQALGGHMNVHRRDRAR++
Sbjct: 28 WPFREERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLK 85

[Close]
BLAST of ClCG07G000860 vs. TAIR10
Match: AT2G37740.1 (AT2G37740.1 zinc-finger protein 10)

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13
Identity = 37/107 (34.58%), Postives = 58/107 (54.21%), Query Frame = 1 

Query: 4   GAYMSNNGKQQEQQQQWGYVKEETFSSNNQFQWPAKNYGCNFCKREFKSAQALGGHMNVH 63
           G ++     ++   ++  + +++   S     WP ++Y C+FC+REFKSAQALGGHMNVH
Sbjct: 6   GFWIPKKSNKESSWEELAFAEDDAAGS----LWPPRSYTCSFCRREFKSAQALGGHMNVH 65

Query: 64  RRDRARMRLLPSWVADNNNNNYYSYPNPNFSN--FSPSCFTFRSSNK 109
           RRDRAR++          +++   YP+   S+     SC+T   + K
Sbjct: 66  RRDRARLKQADDQYLFPKSSSSPEYPSHKDSDNIHETSCYTLVFNTK 108

[Close]
BLAST of ClCG07G000860 vs. NCBI nr
Match: gi|778688627|ref|XP_011652797.1| (PREDICTED: uncharacterized protein LOC101216448 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 8.5e-80
Identity = 161/197 (81.73%), Postives = 171/197 (86.80%), Query Frame = 1 

Query: 1   MDNGAYMSNN---GKQQEQQQQWGYVKEETFSSNNQFQWPAKNYGCNFCKREFKSAQALG 60
           MDNGAYM+NN   GKQQ+QQQQ GY KE TFSSN +FQWPAKNYGCNFCKREFKSAQALG
Sbjct: 127 MDNGAYMNNNTNNGKQQQQQQQRGYAKEGTFSSN-EFQWPAKNYGCNFCKREFKSAQALG 186

Query: 61  GHMNVHRRDRARMRLLPSWVADNN-NNNYYSYPNPNFSNFSPSCFTFR-SSNKNSLSSSS 120
           GHMNVHRRDRARMRLLPSWV+DNN NNNYYS PNPNFSNFSPSCF FR SSNKNSL SS 
Sbjct: 187 GHMNVHRRDRARMRLLPSWVSDNNYNNNYYSCPNPNFSNFSPSCFNFRSSSNKNSLCSSL 246

Query: 121 QDQEKKAIGSCSWNNN-YKPS--LAPH-DQEHVD---DEVLHVLKKKKKNLVNLDLKMGN 180
           QDQ+KK IGSCSWNNN YKPS  + PH DQEHVD   D+VLHV KKKKK +VNL+LKMG+
Sbjct: 247 QDQDKKEIGSCSWNNNIYKPSSLVVPHDDQEHVDDDADQVLHVFKKKKKGMVNLELKMGS 306

Query: 181 LGDDSS-NEDLDLELHL 185
           LGD SS NEDLDLELHL
Sbjct: 307 LGDASSNNEDLDLELHL 322

[Close]
BLAST of ClCG07G000860 vs. NCBI nr
Match: gi|700202792|gb|KGN57925.1| (hypothetical protein Csa_3G392775 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 8.5e-80
Identity = 161/197 (81.73%), Postives = 171/197 (86.80%), Query Frame = 1 

Query: 1   MDNGAYMSNN---GKQQEQQQQWGYVKEETFSSNNQFQWPAKNYGCNFCKREFKSAQALG 60
           MDNGAYM+NN   GKQQ+QQQQ GY KE TFSSN +FQWPAKNYGCNFCKREFKSAQALG
Sbjct: 33  MDNGAYMNNNTNNGKQQQQQQQRGYAKEGTFSSN-EFQWPAKNYGCNFCKREFKSAQALG 92

Query: 61  GHMNVHRRDRARMRLLPSWVADNN-NNNYYSYPNPNFSNFSPSCFTFR-SSNKNSLSSSS 120
           GHMNVHRRDRARMRLLPSWV+DNN NNNYYS PNPNFSNFSPSCF FR SSNKNSL SS 
Sbjct: 93  GHMNVHRRDRARMRLLPSWVSDNNYNNNYYSCPNPNFSNFSPSCFNFRSSSNKNSLCSSL 152

Query: 121 QDQEKKAIGSCSWNNN-YKPS--LAPH-DQEHVD---DEVLHVLKKKKKNLVNLDLKMGN 180
           QDQ+KK IGSCSWNNN YKPS  + PH DQEHVD   D+VLHV KKKKK +VNL+LKMG+
Sbjct: 153 QDQDKKEIGSCSWNNNIYKPSSLVVPHDDQEHVDDDADQVLHVFKKKKKGMVNLELKMGS 212

Query: 181 LGDDSS-NEDLDLELHL 185
           LGD SS NEDLDLELHL
Sbjct: 213 LGDASSNNEDLDLELHL 228

[Close]
BLAST of ClCG07G000860 vs. NCBI nr
Match: gi|659109369|ref|XP_008454679.1| (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo])

HSP 1 Score: 304.7 bits (779), Expect = 1.1e-79
Identity = 162/197 (82.23%), Postives = 170/197 (86.29%), Query Frame = 1 

Query: 1   MDNGAYMSNN---GKQQEQQQQW-GYVKEETFSSNNQFQWPAKNYGCNFCKREFKSAQAL 60
           MDNGAYMSNN   GKQQ+QQQQ  GYVKE TFSSN +FQWPAKNYGCNFCKREFKSAQAL
Sbjct: 1   MDNGAYMSNNTNNGKQQQQQQQQRGYVKEGTFSSN-EFQWPAKNYGCNFCKREFKSAQAL 60

Query: 61  GGHMNVHRRDRARMRLLPSWVADNN-NNNYYSYPNPNFSNFSPSCFTFR-SSNKNSLSSS 120
           GGHMNVHRRDRARMRLLPSWV+DNN NNNYYS PNPNF NFSPSCF FR SSNKNSL SS
Sbjct: 61  GGHMNVHRRDRARMRLLPSWVSDNNYNNNYYSCPNPNFPNFSPSCFNFRSSSNKNSLCSS 120

Query: 121 SQDQEKKAIGSCSWNNNYKPS--LAPH-DQEHV---DDEVLHVLKKKKKNLVNLDLKMGN 180
            QDQ+KK IGSCSWNNNYKPS    PH DQEHV    D+VLHV KKKKK+LVNL+LKMG+
Sbjct: 121 LQDQDKKEIGSCSWNNNYKPSSLFVPHDDQEHVGDDSDQVLHVFKKKKKSLVNLELKMGS 180

Query: 181 LGDDSS-NEDLDLELHL 185
           LGD SS NEDLDLELHL
Sbjct: 181 LGDASSNNEDLDLELHL 196

[Close]
BLAST of ClCG07G000860 vs. NCBI nr
Match: gi|567854041|ref|XP_006420140.1| (hypothetical protein CICLE_v10006961mg [Citrus clementina])

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22
Identity = 87/211 (41.23%), Postives = 111/211 (52.61%), Query Frame = 1 

Query: 3   NGAYMSNNGK------QQEQQQQWGYVKEETFSSNNQFQWPAKNYGCNFCKREFKSAQAL 62
           NG    N+G       QQ QQQ +G   EE  S    F WP ++Y C+FCKREF+SAQAL
Sbjct: 28  NGYNNQNSGNKMKDSCQQRQQQSYG---EEYLSG---FSWPPRSYTCSFCKREFRSAQAL 87

Query: 63  GGHMNVHRRDRARMRLLPSWVAD---NNNNNYYSY--------------PNPNFSNFSPS 122
           GGHMNVHRRDRAR+R+ P    D   NNN N   Y              PNPNFS   P 
Sbjct: 88  GGHMNVHRRDRARLRISPPTPKDIIVNNNINNGQYPLLNLNLNPNPNPNPNPNFST-PPL 147

Query: 123 CFTFRSSNKNSLSSSSQDQEKKAI-GSCSWNNNYKP-----SLAPHDQEHVDDEVLHVLK 182
              F S +  S +SSS+ ++  A+ G+ S  ++ K      S A       +++    L 
Sbjct: 148 VSPFSSFSSQSSASSSEIKKWSALTGALSPKDSVKKNEKSFSGAKEFGGFTEEDDGFKLS 207

Query: 183 KKKKNLVNLDLKMGNLGDDSSNEDLDLELHL 185
           KK   +V LDL++G + D  S EDLDLEL L
Sbjct: 208 KKGGEIVRLDLEIGVISD--SKEDLDLELRL 229

[Close]
BLAST of ClCG07G000860 vs. NCBI nr
Match: gi|645260197|ref|XP_008235719.1| (PREDICTED: transcriptional regulator SUPERMAN [Prunus mume])

HSP 1 Score: 106.7 bits (265), Expect = 4.4e-20
Identity = 73/183 (39.89%), Postives = 94/183 (51.37%), Query Frame = 1 

Query: 36  WPAKNYGCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWVADN---NNNNYYSYPNPN 95
           W AKNY C+FCKREF+SAQALGGHMNVHRRDRAR+RLLP  ++     +N N  SY +P+
Sbjct: 18  WAAKNYACSFCKREFRSAQALGGHMNVHRRDRARLRLLPPSLSSEICPHNPNPSSYFSPS 77

Query: 96  FSNFS------------PSCFTFRSSNKNSLSS--SSQDQEKKAIGSCSWNNNYKPSLAP 155
            S+ S             SC +  S +  +L S  SS D  KK     +   N+ P+L P
Sbjct: 78  SSSSSSLSSSKGLPHNYSSCHSLLSPSLRALMSATSSTDGNKKPKFKYNSPQNHVPNLIP 137

Query: 156 HDQEH--VDDEVLHVLK-----------------KKKKNLVNLDLKMGNLGDDSSNEDLD 183
              +   VD E   +LK                 KK+ N++ LDL MG   D     DL+
Sbjct: 138 KKGKRGAVDHEAGEILKGFAQKDLDDEFNKVDDMKKESNIIRLDLDMGFFKDHKEEVDLE 197

The following BLAST results are available for this feature:
BLAST of ClCG07G000860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SUP_ARATH9.2e-1831.07Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1[more]
RBE_ARATH1.5e-1255.17Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE... [more]
TAC1_ARATH5.6e-0764.71Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1[more]
GIS_ARATH2.8e-0632.26Zinc finger protein GIS OS=Arabidopsis thaliana GN=GIS PE=2 SV=1[more]
BLAST of ClCG07G000860 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7I0_CUCSA5.9e-8081.73Uncharacterized protein OS=Cucumis sativus GN=Csa_3G392775 PE=4 SV=1[more]
V4S3L8_9ROSI8.7e-2341.23Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006961mg PE=4 SV=1[more]
M5VLU7_PRUPE4.0e-2039.67Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb024794mg PE=4 SV=1[more]
V4M5I6_EUTSA3.4e-1935.78Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021992mg PE=4 SV=1[more]
A0A068TT60_COFCA7.6e-1935.82Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026243001 PE=4 SV=1[more]
BLAST of ClCG07G000860 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G42410.12.5e-2146.15 zinc finger protein 11[more]
AT3G23130.15.2e-1931.07 C2H2 and C2HC zinc fingers superfamily protein[more]
AT4G17810.15.0e-1448.68 C2H2 and C2HC zinc fingers superfamily protein[more]
AT5G06070.18.6e-1455.17 C2H2 and C2HC zinc fingers superfamily protein[more]
AT2G37740.11.1e-1334.58 zinc-finger protein 10[more]
BLAST of ClCG07G000860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778688627|ref|XP_011652797.1|8.5e-8081.73PREDICTED: uncharacterized protein LOC101216448 [Cucumis sativus][more]
gi|700202792|gb|KGN57925.1|8.5e-8081.73hypothetical protein Csa_3G392775 [Cucumis sativus][more]
gi|659109369|ref|XP_008454679.1|1.1e-7982.23PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo][more]
gi|567854041|ref|XP_006420140.1|1.2e-2241.23hypothetical protein CICLE_v10006961mg [Citrus clementina][more]
gi|645260197|ref|XP_008235719.1|4.4e-2039.89PREDICTED: transcriptional regulator SUPERMAN [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0044212 transcription regulatory region DNA binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG07G000860.1ClCG07G000860.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PFAMPF13912zf-C2H2_6coord: 41..64
score: 4.
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 43..63
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 41..68
score: 10
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 39..66
score: 6.
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 29..182
score: 9.7
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 38..68
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG07G000860Csa3G141870Cucumber (Chinese Long) v2cuwcgB255
ClCG07G000860MELO3C026785Melon (DHL92) v3.5.1mewcgB402
ClCG07G000860Cla007566Watermelon (97103) v1wcgwmB395
ClCG07G000860Cla005998Watermelon (97103) v1wcgwmB373
ClCG07G000860Cla97C07G129150Watermelon (97103) v2wcgwmbB307
ClCG07G000860Cla97C05G085440Watermelon (97103) v2wcgwmbB304
ClCG07G000860Bhi05G000173Wax gourdwcgwgoB585
ClCG07G000860CSPI03G12290Wild cucumber (PI 183967)cpiwcgB264
ClCG07G000860Cucsa.255130Cucumber (Gy14) v1cgywcgB457
ClCG07G000860CmaCh14G017900Cucurbita maxima (Rimu)cmawcgB240
ClCG07G000860CmaCh02G017600Cucurbita maxima (Rimu)cmawcgB568
ClCG07G000860CmoCh02G018050Cucurbita moschata (Rifu)cmowcgB566
ClCG07G000860CmoCh19G000840Cucurbita moschata (Rifu)cmowcgB466
ClCG07G000860CmoCh14G018270Cucurbita moschata (Rifu)cmowcgB227
ClCG07G000860Lsi05G016940Bottle gourd (USVL1VR-Ls)lsiwcgB349
ClCG07G000860Lsi05G009970Bottle gourd (USVL1VR-Ls)lsiwcgB348
ClCG07G000860Cp4.1LG05g01460Cucurbita pepo (Zucchini)cpewcgB683
ClCG07G000860Cp4.1LG15g00600Cucurbita pepo (Zucchini)cpewcgB240
ClCG07G000860Cp4.1LG03g10150Cucurbita pepo (Zucchini)cpewcgB569
ClCG07G000860CsGy3G012420Cucumber (Gy14) v2cgybwcgB238
ClCG07G000860MELO3C006453.2Melon (DHL92) v3.6.1medwcgB439
ClCG07G000860Carg16865Silver-seed gourdcarwcgB0730
ClCG07G000860Carg08976Silver-seed gourdcarwcgB0760
ClCG07G000860Carg16576Silver-seed gourdcarwcgB0228
ClCG07G000860CsaV3_3G012410Cucumber (Chinese Long) v3cucwcgB264
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
ClCG07G000860ClCG06G006780Watermelon (Charleston Gray)wcgwcgB174
The following block(s) are covering this gene:
GeneOrganismBlock
ClCG07G000860Cucumber (Chinese Long) v3cucwcgB168
ClCG07G000860Watermelon (97103) v2wcgwmbB305
ClCG07G000860Watermelon (Charleston Gray)wcgwcgB164
ClCG07G000860Cucurbita maxima (Rimu)cmawcgB467
ClCG07G000860Cucurbita maxima (Rimu)cmawcgB811
ClCG07G000860Cucurbita moschata (Rifu)cmowcgB808
ClCG07G000860Wild cucumber (PI 183967)cpiwcgB163
ClCG07G000860Cucumber (Chinese Long) v2cuwcgB160
ClCG07G000860Melon (DHL92) v3.5.1mewcgB445
ClCG07G000860Watermelon (97103) v1wcgwmB382
ClCG07G000860Bottle gourd (USVL1VR-Ls)lsiwcgB032
ClCG07G000860Cucumber (Gy14) v2cgybwcgB149
ClCG07G000860Melon (DHL92) v3.6.1medwcgB390
ClCG07G000860Silver-seed gourdcarwcgB0938