Carg16865 (gene) Silver-seed gourd

Overview
NameCarg16865
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptiontranscriptional regulator SUPERMAN-like
LocationCucurbita_argyrosperma_scaffold_105 : 492090 .. 492599 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGTGGGAAGATTATTGCGAACGATCCAGAACAAGAACAGGAACAAGAACGACGATGGGGTTTCGTCGTAAAAGACGAAACTTTTTCGAGCAATCAATTTCAATGGCCTGCAAAGAATTATTCTTGTAATTTTTGCAAGAGGGAATTCAAGTCAGCTCAAGCTCTTGGTGGGCATATGAATGTTCATAGAAGGGATAGGGCAAGAATGAGGCTTTTGCCTTCATGGATGGCTGATAATTCTTACCCTAACCCTAATTCTTGCTTCACTTTCAAATTGAATTCCAACAACTCTTTGTGTTCCAATACTCAAGAAGAGAAGAAAGCTTTTGGGAGTTGTTCATGGAACAATTACAAGCCCTCATTCAGCTCTCAAGATGATCATGATGATGTTCTTCATGTTTTGAAGAAGAAAAAGAAGAAAAATTTAGTGAATTTAGAGCTCAAAATGGGGAATTTGGAAGATGATTCTTCAAATGAAGATCTTGATTTGGAGCTTCATCTTTGA

mRNA sequence

ATGGAGGGTGGGAAGATTATTGCGAACGATCCAGAACAAGAACAGGAACAAGAACGACGATGGGGTTTCGTCGTAAAAGACGAAACTTTTTCGAGCAATCAATTTCAATGGCCTGCAAAGAATTATTCTTGTAATTTTTGCAAGAGGGAATTCAAGTCAGCTCAAGCTCTTGGTGGGCATATGAATGTTCATAGAAGGGATAGGGCAAGAATGAGGCTTTTGCCTTCATGGATGGCTGATAATTCTTACCCTAACCCTAATTCTTGCTTCACTTTCAAATTGAATTCCAACAACTCTTTGTGTTCCAATACTCAAGAAGAGAAGAAAGCTTTTGGGAGTTGTTCATGGAACAATTACAAGCCCTCATTCAGCTCTCAAGATGATCATGATGATGTTCTTCATGTTTTGAAGAAGAAAAAGAAGAAAAATTTAGTGAATTTAGAGCTCAAAATGGGGAATTTGGAAGATGATTCTTCAAATGAAGATCTTGATTTGGAGCTTCATCTTTGA

Coding sequence (CDS)

ATGGAGGGTGGGAAGATTATTGCGAACGATCCAGAACAAGAACAGGAACAAGAACGACGATGGGGTTTCGTCGTAAAAGACGAAACTTTTTCGAGCAATCAATTTCAATGGCCTGCAAAGAATTATTCTTGTAATTTTTGCAAGAGGGAATTCAAGTCAGCTCAAGCTCTTGGTGGGCATATGAATGTTCATAGAAGGGATAGGGCAAGAATGAGGCTTTTGCCTTCATGGATGGCTGATAATTCTTACCCTAACCCTAATTCTTGCTTCACTTTCAAATTGAATTCCAACAACTCTTTGTGTTCCAATACTCAAGAAGAGAAGAAAGCTTTTGGGAGTTGTTCATGGAACAATTACAAGCCCTCATTCAGCTCTCAAGATGATCATGATGATGTTCTTCATGTTTTGAAGAAGAAAAAGAAGAAAAATTTAGTGAATTTAGAGCTCAAAATGGGGAATTTGGAAGATGATTCTTCAAATGAAGATCTTGATTTGGAGCTTCATCTTTGA

Protein sequence

MEGGKIIANDPEQEQEQERRWGFVVKDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNSYPNPNSCFTFKLNSNNSLCSNTQEEKKAFGSCSWNNYKPSFSSQDDHDDVLHVLKKKKKKNLVNLELKMGNLEDDSSNEDLDLELHL
Homology
[Close]
BLAST of Carg16865 vs. NCBI nr
Match: XP_023511420.1 (zinc finger protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.4 bits (851), Expect = 8.9e-88
Identity = 166/169 (98.22%), Postives = 167/169 (98.82%), Query Frame = 0 

Query: 1   MEGGKIIANDPEQEQEQERRWGFVVKDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGH 60
           MEGGKIIAND EQEQEQERRWGFVVKDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGH
Sbjct: 1   MEGGKIIANDREQEQEQERRWGFVVKDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGH 60

Query: 61  MNVHRRDRARMRLLPSWMADNSYPNPNSCFTFKLNSNNSLCSNTQEEKKAFGSCSWNNYK 120
           MNVHRRDRARMRLLPSWMADNSYPNPNSCFTFKLN+NNSLCSNTQEEKK FGSCSWNNYK
Sbjct: 61  MNVHRRDRARMRLLPSWMADNSYPNPNSCFTFKLNTNNSLCSNTQEEKKGFGSCSWNNYK 120

Query: 121 PSFSSQDDHDDVLHVLXXXXXXNLVNLELKMGNLEDDSSNEDLDLELHL 170
           PSFSSQDDHDDVLHVLXXXXXXNLVNLELKMGNLEDDSSNEDLDLELHL
Sbjct: 121 PSFSSQDDHDDVLHVLXXXXXXNLVNLELKMGNLEDDSSNEDLDLELHL 169

[Close]
BLAST of Carg16865 vs. NCBI nr
Match: XP_022963791.1 (zinc finger protein 11-like [Cucurbita moschata])

HSP 1 Score: 312.8 bits (800), Expect = 7.3e-82
Identity = 158/169 (93.49%), Postives = 158/169 (93.49%), Query Frame = 0 

Query: 1   MEGGKIIANDPEQEQEQERRWGFVVKDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGH 60
           MEGGKIIAND         RW FVVKDETFS NQFQWPAKNYSCNFCKREFKSAQALGGH
Sbjct: 1   MEGGKIIANDQXXXXXXXXRWSFVVKDETFSCNQFQWPAKNYSCNFCKREFKSAQALGGH 60

Query: 61  MNVHRRDRARMRLLPSWMADNSYPNPNSCFTFKLNSNNSLCSNTQEEKKAFGSCSWNNYK 120
           MNVHRRDRARMRLLPSWMADNSYPNPNSCFTFKLNSNNSLCSNTQEEKKAFGSCSWNNYK
Sbjct: 61  MNVHRRDRARMRLLPSWMADNSYPNPNSCFTFKLNSNNSLCSNTQEEKKAFGSCSWNNYK 120

Query: 121 PSFSSQDDHDDVLHVLXXXXXXNLVNLELKMGNLEDDSSNEDLDLELHL 170
           PSFSSQDDHDDVLHVLXXXXXXNLVNLELKMGNLEDDSSNEDLDLELHL
Sbjct: 121 PSFSSQDDHDDVLHVLXXXXXXNLVNLELKMGNLEDDSSNEDLDLELHL 169

[Close]
BLAST of Carg16865 vs. NCBI nr
Match: XP_008454679.1 (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo])

HSP 1 Score: 190.3 bits (482), Expect = 5.5e-45
Identity = 111/171 (64.91%), Postives = 123/171 (71.93%), Query Frame = 0 

Query: 25  VKDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNSY- 84
           VK+ TFSSN+FQWPAKNY CNFCKREFKSAQALGGHMNVHRRDRARMRLLPSW++DN+Y 
Sbjct: 27  VKEGTFSSNEFQWPAKNYGCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWVSDNNYN 86

Query: 85  ------PNPN------SCFTFKLNSN-NSLCSNTQ-EEKKAFGSCSW-NNYKPSF----- 144
                 PNPN      SCF F+ +SN NSLCS+ Q ++KK  GSCSW NNYKPS      
Sbjct: 87  NNYYSCPNPNFPNFSPSCFNFRSSSNKNSLCSSLQDQDKKEIGSCSWNNNYKPSSLFVPH 146

Query: 145 ----SSQDDHDDVLHVLXXXXXXNLVNLELKMGNLEDDSS-NEDLDLELHL 170
                  DD D VLHV       +LVNLELKMG+L D SS NEDLDLELHL
Sbjct: 147 DDQEHVGDDSDQVLHVF-KKKKKSLVNLELKMGSLGDASSNNEDLDLELHL 196

[Close]
BLAST of Carg16865 vs. NCBI nr
Match: KGN57925.1 (hypothetical protein Csa_3G392775 [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 4.6e-44
Identity = 109/171 (63.74%), Postives = 121/171 (70.76%), Query Frame = 0 

Query: 26  KDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNSY-- 85
           K+ TFSSN+FQWPAKNY CNFCKREFKSAQALGGHMNVHRRDRARMRLLPSW++DN+Y  
Sbjct: 59  KEGTFSSNEFQWPAKNYGCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWVSDNNYNN 118

Query: 86  -----PNPN------SCFTFKLNSN-NSLCSNTQ-EEKKAFGSCSWNN--YKPSF----- 145
                PNPN      SCF F+ +SN NSLCS+ Q ++KK  GSCSWNN  YKPS      
Sbjct: 119 NYYSCPNPNFSNFSPSCFNFRSSSNKNSLCSSLQDQDKKEIGSCSWNNNIYKPSSLVVPH 178

Query: 146 ----SSQDDHDDVLHVLXXXXXXNLVNLELKMGNLEDDSS-NEDLDLELHL 170
                  DD D VLHV        +VNLELKMG+L D SS NEDLDLELHL
Sbjct: 179 DDQEHVDDDADQVLHVF-KKKKKGMVNLELKMGSLGDASSNNEDLDLELHL 228

[Close]
BLAST of Carg16865 vs. NCBI nr
Match: XP_011652797.1 (PREDICTED: uncharacterized protein LOC101216448 [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 4.6e-44
Identity = 109/171 (63.74%), Postives = 121/171 (70.76%), Query Frame = 0 

Query: 26  KDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNSY-- 85
           K+ TFSSN+FQWPAKNY CNFCKREFKSAQALGGHMNVHRRDRARMRLLPSW++DN+Y  
Sbjct: 153 KEGTFSSNEFQWPAKNYGCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWVSDNNYNN 212

Query: 86  -----PNPN------SCFTFKLNSN-NSLCSNTQ-EEKKAFGSCSWNN--YKPSF----- 145
                PNPN      SCF F+ +SN NSLCS+ Q ++KK  GSCSWNN  YKPS      
Sbjct: 213 NYYSCPNPNFSNFSPSCFNFRSSSNKNSLCSSLQDQDKKEIGSCSWNNNIYKPSSLVVPH 272

Query: 146 ----SSQDDHDDVLHVLXXXXXXNLVNLELKMGNLEDDSS-NEDLDLELHL 170
                  DD D VLHV        +VNLELKMG+L D SS NEDLDLELHL
Sbjct: 273 DDQEHVDDDADQVLHVF-KKKKKGMVNLELKMGSLGDASSNNEDLDLELHL 322

[Close]
BLAST of Carg16865 vs. TAIR10
Match: AT2G42410.1 (zinc finger protein 11)

HSP 1 Score: 83.2 bits (204), Expect = 1.7e-16
Identity = 39/81 (48.15%), Postives = 54/81 (66.67%), Query Frame = 0 

Query: 10 DPEQEQEQERRWG----FVVKDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHR 69
          D  QE+E E   G     +   + + +    WP KNY+C+FC+REF+SAQALGGHMNVHR
Sbjct: 13 DKTQEEEGEDGNGDNRVIMNHYKNYEAGLIPWPPKNYTCSFCRREFRSAQALGGHMNVHR 72

Query: 70 RDRARMRLLPSWMADNSYPNP 87
          RDRA++R +PSW+ +  +  P
Sbjct: 73 RDRAKLRQIPSWLFEPHHHTP 93

[Close]
BLAST of Carg16865 vs. TAIR10
Match: AT2G37740.1 (zinc-finger protein 10)

HSP 1 Score: 74.7 bits (182), Expect = 6.1e-14
Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 0 

Query: 37  WPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMR------LLPSWMADNSYP------ 96
           WP ++Y+C+FC+REFKSAQALGGHMNVHRRDRAR++      L P   +   YP      
Sbjct: 34  WPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADDQYLFPKSSSSPEYPSHKDSD 93

[Close]
BLAST of Carg16865 vs. TAIR10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 71.6 bits (174), Expect = 5.1e-13
Identity = 33/67 (49.25%), Postives = 40/67 (59.70%), Query Frame = 0 

Query: 23  FVVKDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNS 82
           F   +E        WP ++YSC+FC REFKSAQALGGHMNVHRRDRAR++      +   
Sbjct: 36  FASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTD 95

Query: 83  YPNPNSC 90
              P  C
Sbjct: 96  QATPPEC 102

[Close]
BLAST of Carg16865 vs. TAIR10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 68.6 bits (166), Expect = 4.3e-12
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 0 

Query: 9  NDPEQEQEQERRWGFVVKDETFSSN--QFQWPAKNYSCNFCKREFKSAQALGGHMNVHRR 68
          N  E+ ++ +  W     ++    N     WP ++Y+CNFC+REF+SAQALGGHMNVHRR
Sbjct: 11 NKIEELEDDDESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRR 70

Query: 69 DRARMR 73
          DRA  R
Sbjct: 71 DRASSR 76

[Close]
BLAST of Carg16865 vs. TAIR10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 8.2e-11
Identity = 25/32 (78.12%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 35 FQWPAKNYSCNFCKREFKSAQALGGHMNVHRR 67
          F WP ++Y+C+FCKREF+SAQALGGHMNVHRR
Sbjct: 40 FSWPPRSYTCSFCKREFRSAQALGGHMNVHRR 71

[Close]
BLAST of Carg16865 vs. Swiss-Prot
Match: sp|Q9SLB8|ZFP11_ARATH (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-15
Identity = 39/81 (48.15%), Postives = 54/81 (66.67%), Query Frame = 0 

Query: 10 DPEQEQEQERRWG----FVVKDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHR 69
          D  QE+E E   G     +   + + +    WP KNY+C+FC+REF+SAQALGGHMNVHR
Sbjct: 13 DKTQEEEGEDGNGDNRVIMNHYKNYEAGLIPWPPKNYTCSFCRREFRSAQALGGHMNVHR 72

Query: 70 RDRARMRLLPSWMADNSYPNP 87
          RDRA++R +PSW+ +  +  P
Sbjct: 73 RDRAKLRQIPSWLFEPHHHTP 93

[Close]
BLAST of Carg16865 vs. Swiss-Prot
Match: sp|O80942|ZFP10_ARATH (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-12
Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 0 

Query: 37  WPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMR------LLPSWMADNSYP------ 96
           WP ++Y+C+FC+REFKSAQALGGHMNVHRRDRAR++      L P   +   YP      
Sbjct: 34  WPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADDQYLFPKSSSSPEYPSHKDSD 93

[Close]
BLAST of Carg16865 vs. Swiss-Prot
Match: sp|Q9LHS9|RBE_ARATH (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 9.2e-12
Identity = 33/67 (49.25%), Postives = 40/67 (59.70%), Query Frame = 0 

Query: 23  FVVKDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNS 82
           F   +E        WP ++YSC+FC REFKSAQALGGHMNVHRRDRAR++      +   
Sbjct: 36  FASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTD 95

Query: 83  YPNPNSC 90
              P  C
Sbjct: 96  QATPPEC 102

[Close]
BLAST of Carg16865 vs. Swiss-Prot
Match: sp|Q38895|SUP_ARATH (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-09
Identity = 25/32 (78.12%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 35 FQWPAKNYSCNFCKREFKSAQALGGHMNVHRR 67
          F WP ++Y+C+FCKREF+SAQALGGHMNVHRR
Sbjct: 40 FSWPPRSYTCSFCKREFRSAQALGGHMNVHRR 71

[Close]
BLAST of Carg16865 vs. Swiss-Prot
Match: sp|Q9SR34|TAC1_ARATH (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.2e-07
Identity = 22/34 (64.71%), Postives = 30/34 (88.24%), Query Frame = 0 

Query: 39 AKNYSCNFCKREFKSAQALGGHMNVHRRDRARMR 73
          +++Y C+FC R F +AQALGGHMN+HRRDRA++R
Sbjct: 32 SRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLR 65

[Close]
BLAST of Carg16865 vs. TrEMBL
Match: tr|A0A1S3C0E4|A0A1S3C0E4_CUCME (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103495035 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.6e-45
Identity = 111/171 (64.91%), Postives = 123/171 (71.93%), Query Frame = 0 

Query: 25  VKDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNSY- 84
           VK+ TFSSN+FQWPAKNY CNFCKREFKSAQALGGHMNVHRRDRARMRLLPSW++DN+Y 
Sbjct: 27  VKEGTFSSNEFQWPAKNYGCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWVSDNNYN 86

Query: 85  ------PNPN------SCFTFKLNSN-NSLCSNTQ-EEKKAFGSCSW-NNYKPSF----- 144
                 PNPN      SCF F+ +SN NSLCS+ Q ++KK  GSCSW NNYKPS      
Sbjct: 87  NNYYSCPNPNFPNFSPSCFNFRSSSNKNSLCSSLQDQDKKEIGSCSWNNNYKPSSLFVPH 146

Query: 145 ----SSQDDHDDVLHVLXXXXXXNLVNLELKMGNLEDDSS-NEDLDLELHL 170
                  DD D VLHV       +LVNLELKMG+L D SS NEDLDLELHL
Sbjct: 147 DDQEHVGDDSDQVLHVF-KKKKKSLVNLELKMGSLGDASSNNEDLDLELHL 196

[Close]
BLAST of Carg16865 vs. TrEMBL
Match: tr|A0A0A0L7I0|A0A0A0L7I0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G392775 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.1e-44
Identity = 109/171 (63.74%), Postives = 121/171 (70.76%), Query Frame = 0 

Query: 26  KDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNSY-- 85
           K+ TFSSN+FQWPAKNY CNFCKREFKSAQALGGHMNVHRRDRARMRLLPSW++DN+Y  
Sbjct: 59  KEGTFSSNEFQWPAKNYGCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWVSDNNYNN 118

Query: 86  -----PNPN------SCFTFKLNSN-NSLCSNTQ-EEKKAFGSCSWNN--YKPSF----- 145
                PNPN      SCF F+ +SN NSLCS+ Q ++KK  GSCSWNN  YKPS      
Sbjct: 119 NYYSCPNPNFSNFSPSCFNFRSSSNKNSLCSSLQDQDKKEIGSCSWNNNIYKPSSLVVPH 178

Query: 146 ----SSQDDHDDVLHVLXXXXXXNLVNLELKMGNLEDDSS-NEDLDLELHL 170
                  DD D VLHV        +VNLELKMG+L D SS NEDLDLELHL
Sbjct: 179 DDQEHVDDDADQVLHVF-KKKKKGMVNLELKMGSLGDASSNNEDLDLELHL 228

[Close]
BLAST of Carg16865 vs. TrEMBL
Match: tr|A0A061DNX7|A0A061DNX7_THECC (C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_004130 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.5e-14
Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = 0 

Query: 37  WPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNSYPNPNS 89
           WP K+Y+C+FCKREF+SAQALGGHMNVHR+DRAR+RLL SW  +   P PNS
Sbjct: 51  WPPKSYTCSFCKREFRSAQALGGHMNVHRKDRARLRLLSSWALECQNPEPNS 102

[Close]
BLAST of Carg16865 vs. TrEMBL
Match: tr|A0A1U8P9H9|A0A1U8P9H9_GOSHI (transcriptional regulator SUPERMAN-like OS=Gossypium hirsutum OX=3635 GN=LOC107956886 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.3e-14
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 0 

Query: 25 VKDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNSYP 84
          ++ E +S  +  WPAK Y+C FCKREF+SAQALGGHMNVHR+DRAR+RL  SW+ ++  P
Sbjct: 24 LEGEQYSCCKSPWPAKYYTCTFCKREFRSAQALGGHMNVHRKDRARLRLFSSWVLESQNP 83

Query: 85 N 86
          N
Sbjct: 84 N 84

[Close]
BLAST of Carg16865 vs. TrEMBL
Match: tr|A0A2P5WM87|A0A2P5WM87_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA28474 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.3e-14
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 0 

Query: 25 VKDETFSSNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNSYP 84
          ++ E +S  +  WPAK Y+C FCKREF+SAQALGGHMNVHR+DRAR+RL  SW+ ++  P
Sbjct: 24 LEGEQYSCCKSPWPAKYYTCTFCKREFRSAQALGGHMNVHRKDRARLRLFSSWVLESQNP 83

Query: 85 N 86
          N
Sbjct: 84 N 84

The following BLAST results are available for this feature:
BLAST of Carg16865 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023511420.18.9e-8898.22zinc finger protein 11-like [Cucurbita pepo subsp. pepo][more]
XP_022963791.17.3e-8293.49zinc finger protein 11-like [Cucurbita moschata][more]
XP_008454679.15.5e-4564.91PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo][more]
KGN57925.14.6e-4463.74hypothetical protein Csa_3G392775 [Cucumis sativus][more]
XP_011652797.14.6e-4463.74PREDICTED: uncharacterized protein LOC101216448 [Cucumis sativus][more]
BLAST of Carg16865 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G42410.11.7e-1648.15zinc finger protein 11[more]
AT2G37740.16.1e-1448.65zinc-finger protein 10[more]
AT5G06070.15.1e-1349.25C2H2 and C2HC zinc fingers superfamily protein[more]
AT4G17810.14.3e-1248.48C2H2 and C2HC zinc fingers superfamily protein[more]
AT3G23130.18.2e-1178.13C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of Carg16865 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SLB8|ZFP11_ARATH3.1e-1548.15Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1[more]
sp|O80942|ZFP10_ARATH1.1e-1248.65Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1[more]
sp|Q9LHS9|RBE_ARATH9.2e-1249.25Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G... [more]
sp|Q38895|SUP_ARATH1.5e-0978.13Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S... [more]
sp|Q9SR34|TAC1_ARATH5.2e-0764.71Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1[more]
BLAST of Carg16865 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C0E4|A0A1S3C0E4_CUCME3.6e-4564.91transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103495035 ... [more]
tr|A0A0A0L7I0|A0A0A0L7I0_CUCSA3.1e-4463.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G392775 PE=4 SV=1[more]
tr|A0A061DNX7|A0A061DNX7_THECC2.5e-1471.15C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao OX=3... [more]
tr|A0A1U8P9H9|A0A1U8P9H9_GOSHI3.3e-1460.66transcriptional regulator SUPERMAN-like OS=Gossypium hirsutum OX=3635 GN=LOC1079... [more]
tr|A0A2P5WM87|A0A2P5WM87_GOSBA3.3e-1460.66Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA28474 PE=4 SV... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16865-RACarg16865-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 137..157
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 42..65
e-value: 6.4E-6
score: 25.9
NoneNo IPR availableGENE3DG3DSA:3.30.160.60coord: 22..82
e-value: 7.5E-6
score: 27.6
NoneNo IPR availablePANTHERPTHR26374:SF205SUBFAMILY NOT NAMEDcoord: 18..169
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 18..169
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 42..64
e-value: 0.0062
score: 25.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 44..64
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 42..69
score: 11.157
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 39..69

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg16865Cla007566Watermelon (97103) v1carwmB0753
Carg16865Cla005998Watermelon (97103) v1carwmB0750
Carg16865Csa2G190780Cucumber (Chinese Long) v2carcuB0766
Carg16865ClCG07G000860Watermelon (Charleston Gray)carwcgB0730
Carg16865ClCG06G006780Watermelon (Charleston Gray)carwcgB0728
Carg16865CSPI02G10570Wild cucumber (PI 183967)carcpiB0783
Carg16865Cucsa.383800Cucumber (Gy14) v1carcgyB0849
Carg16865CmaCh02G017600Cucurbita maxima (Rimu)carcmaB1051
Carg16865CmoCh19G000840Cucurbita moschata (Rifu)carcmoB1021
Carg16865CmoCh02G018050Cucurbita moschata (Rifu)carcmoB1023
Carg16865Lsi05G009970Bottle gourd (USVL1VR-Ls)carlsiB689
Carg16865Cp4.1LG05g01460Cucurbita pepo (Zucchini)carcpeB1062
Carg16865Cp4.1LG15g00600Cucurbita pepo (Zucchini)carcpeB1057
Carg16865CsGy2G010580Cucumber (Gy14) v2carcgybB0745
Carg16865MELO3C026785.2Melon (DHL92) v3.6.1carmedB0760
Carg16865CsaV3_2G012990Cucumber (Chinese Long) v3carcucB0786
Carg16865Cla97C07G129150Watermelon (97103) v2carwmbB0788
Carg16865Bhi05G000173Wax gourdcarwgoB0888
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg16865Carg16576Silver-seed gourdcarcarB272
Carg16865Carg08976Silver-seed gourdcarcarB599
The following block(s) are covering this gene:
GeneOrganismBlock
Carg16865Silver-seed gourdcarcarB262
Carg16865Cucurbita maxima (Rimu)carcmaB1052
Carg16865Cucurbita maxima (Rimu)carcmaB1049
Carg16865Cucurbita moschata (Rifu)carcmoB1025
Carg16865Cucurbita pepo (Zucchini)carcpeB1058
Carg16865Cucumber (Chinese Long) v3carcucB0790
Carg16865Bottle gourd (USVL1VR-Ls)carlsiB687
Carg16865Watermelon (97103) v2carwmbB0787