Carg16576 (gene) Silver-seed gourd

Overview
NameCarg16576
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptiontranscriptional regulator SUPERMAN-like
LocationCucurbita_argyrosperma_scaffold_089 : 406362 .. 406922 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGGAACTGTCTACGCACTGCCTGTCGTACGAGTTTAACAACAATGAACACCACCATCAGCGGCGGAGGAGCACCAGCAGCAGCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAACAGCCAACGCGGCAGTGAAAAGCCAGAGAAACAAGGTGTGCAGGGCAGCGGCGGCGGCAGAGGAGGATTTCATAAATGGGATTTCATGGCCACCAAGAAGTTACACGTGCAACTTCTGCAAAAGGGAATTCAGATCGGCTCAAGCACTTGGCGGCCACATGAATGTCCACCGGAGAGATAGAGCCTTACTCTACTCTCCCCCTGCTGATCATACCCACTTCACAAATCTCAACCTTAACCTTCACCATAACCCTTTCCCTAATCGCCCCTTCAAAGCCTTGGAGATTGCCAAACCTAATAGGAACAAGCCCCACAAATTCATTGGTTTGGACATTGAAATCAACACTACCAATAACACTGCCACCCTACTTACTGAATCCAAGAAAAAGGACATTGATTTGGAGCTTCGATTAGGGTACTCAACTTAG

mRNA sequence

ATGGAGAGGAACTGTCTACGCACTGCCTGTCGTACGAGTTTAACAACAATGAACACCACCATCAGCGGCGGAGGAGCACCAGCAGCAGCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAACAGCCAACGCGGCAGTGAAAAGCCAGAGAAACAAGGTGTGCAGGGCAGCGGCGGCGGCAGAGGAGGATTTCATAAATGGGATTTCATGGCCACCAAGAAGTTACACGTGCAACTTCTGCAAAAGGGAATTCAGATCGGCTCAAGCACTTGGCGGCCACATGAATGTCCACCGGAGAGATAGAGCCTTACTCTACTCTCCCCCTGCTGATCATACCCACTTCACAAATCTCAACCTTAACCTTCACCATAACCCTTTCCCTAATCGCCCCTTCAAAGCCTTGGAGATTGCCAAACCTAATAGGAACAAGCCCCACAAATTCATTGGTTTGGACATTGAAATCAACACTACCAATAACACTGCCACCCTACTTACTGAATCCAAGAAAAAGGACATTGATTTGGAGCTTCGATTAGGGTACTCAACTTAG

Coding sequence (CDS)

ATGGAGAGGAACTGTCTACGCACTGCCTGTCGTACGAGTTTAACAACAATGAACACCACCATCAGCGGCGGAGGAGCACCAGCAGCAGCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAACAGCCAACGCGGCAGTGAAAAGCCAGAGAAACAAGGTGTGCAGGGCAGCGGCGGCGGCAGAGGAGGATTTCATAAATGGGATTTCATGGCCACCAAGAAGTTACACGTGCAACTTCTGCAAAAGGGAATTCAGATCGGCTCAAGCACTTGGCGGCCACATGAATGTCCACCGGAGAGATAGAGCCTTACTCTACTCTCCCCCTGCTGATCATACCCACTTCACAAATCTCAACCTTAACCTTCACCATAACCCTTTCCCTAATCGCCCCTTCAAAGCCTTGGAGATTGCCAAACCTAATAGGAACAAGCCCCACAAATTCATTGGTTTGGACATTGAAATCAACACTACCAATAACACTGCCACCCTACTTACTGAATCCAAGAAAAAGGACATTGATTTGGAGCTTCGATTAGGGTACTCAACTTAG

Protein sequence

MERNCLRTACRTSLTTMNTTISGGGAPAAAAAAGGGGGGGGGGGTANAAVKSQRNKVCRAAAAAEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLLTESKKKDIDLELRLGYST
Homology
[Close]
BLAST of Carg16576 vs. NCBI nr
Match: XP_022924639.1 (zinc finger protein 11-like [Cucurbita moschata])

HSP 1 Score: 258.5 bits (659), Expect = 1.8e-65
Identity = 177/186 (95.16%), Postives = 178/186 (95.70%), Query Frame = 0 

Query: 1   MERNCLRTACRTSLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MERNCLRTACRTSLT        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MERNCLRTACRTSLT--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN 120
           XXXXXXXFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN
Sbjct: 61  XXXXXXXFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN 120

Query: 121 LNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLLTESKKKDIDLEL 180
           LNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATL+TESKKKDIDLEL
Sbjct: 121 LNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLITESKKKDIDLEL 178

Query: 181 RLGYST 187
           RLGYST
Sbjct: 181 RLGYST 178

[Close]
BLAST of Carg16576 vs. NCBI nr
Match: XP_023526745.1 (zinc finger protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.3 bits (656), Expect = 4.0e-65
Identity = 179/186 (96.24%), Postives = 180/186 (96.77%), Query Frame = 0 

Query: 1   MERNCLRTACRTSLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MERNCLRTACRTSLT    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MERNCLRTACRTSLT----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN 120
           XXXXX  FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN
Sbjct: 61  XXXXXEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN 120

Query: 121 LNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLLTESKKKDIDLEL 180
           LNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEI+TTNNTATLLTESKKKDIDLEL
Sbjct: 121 LNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEISTTNNTATLLTESKKKDIDLEL 180

Query: 181 RLGYST 187
           RLGYST
Sbjct: 181 RLGYST 182

[Close]
BLAST of Carg16576 vs. NCBI nr
Match: XP_022979614.1 (transcriptional regulator SUPERMAN-like [Cucurbita maxima])

HSP 1 Score: 166.0 bits (419), Expect = 1.2e-37
Identity = 141/185 (76.22%), Postives = 141/185 (76.22%), Query Frame = 0 

Query: 1   MERNCLRTACRTSLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MERNCLRTACRTSL         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MERNCLRTACRTSLA----TMNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN 120
           XXXXXXXFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN
Sbjct: 61  XXXXXXXFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTN 120

Query: 121 LNLNLHHNPFPNRPFKALEIAKPNRNKPHKFIGLDIEINTTNNTATLLTESKKKDIDLEL 180
           L          NRP KALEIAKPNRNK HKFIGLD                       EL
Sbjct: 121 LXXXXXXXXXXNRPLKALEIAKPNRNKAHKFIGLD-XXXXXXXXXXXXXXXXXXXXXXEL 180

Query: 181 RLGYS 186
           RLGYS
Sbjct: 181 RLGYS 180

[Close]
BLAST of Carg16576 vs. NCBI nr
Match: XP_004134421.1 (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis sativus] >KGN56891.1 hypothetical protein Csa_3G141870 [Cucumis sativus])

HSP 1 Score: 157.5 bits (397), Expect = 4.3e-35
Identity = 95/145 (65.52%), Postives = 103/145 (71.03%), Query Frame = 0 

Query: 68  FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLNLHH 127
           FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPAD   FTNLNLNL H
Sbjct: 46  FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPAD-GQFTNLNLNLLH 105

Query: 128 NPFPN-----------RPFKALEIA--------KPNR------NKPHKF-IGLDIEINTT 187
           NP PN           R    L+++        KPN        K  KF IGLDIEI+TT
Sbjct: 106 NPNPNISSYDEVTFVGRKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTT 165

[Close]
BLAST of Carg16576 vs. NCBI nr
Match: XP_008438560.1 (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo])

HSP 1 Score: 135.2 bits (339), Expect = 2.3e-28
Identity = 85/147 (57.82%), Postives = 91/147 (61.90%), Query Frame = 0 

Query: 68  FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNL---- 127
           FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPAD   FTNL      
Sbjct: 46  FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPAD-GQFTNLXXXXXX 105

Query: 128 ---------NLHHNPFPNRPFKALEI--------AKPNR------NKPHKF-IGLDIEIN 187
                    +     F  R    L++        AKPN        K  KF IGLDIEI+
Sbjct: 106 XXXXXXXXSSYDEVTFVGRKASDLKLSSMTAEIAAKPNMFERGHWKKGEKFNIGLDIEIS 165

[Close]
BLAST of Carg16576 vs. TAIR10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 81.6 bits (200), Expect = 5.5e-16
Identity = 34/38 (89.47%), Postives = 37/38 (97.37%), Query Frame = 0 

Query: 69  INGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA 107
           I+G +WPPRSYTCNFC+REFRSAQALGGHMNVHRRDRA
Sbjct: 36  ISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRA 73

[Close]
BLAST of Carg16576 vs. TAIR10
Match: AT2G42410.1 (zinc finger protein 11)

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-14
Identity = 32/42 (76.19%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 72  ISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPA 114
           I WPP++YTC+FC+REFRSAQALGGHMNVHRRDRA L   P+
Sbjct: 42  IPWPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPS 83

[Close]
BLAST of Carg16576 vs. TAIR10
Match: AT2G37740.1 (zinc-finger protein 10)

HSP 1 Score: 75.9 bits (185), Expect = 3.0e-14
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 71  GISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL 109
           G  WPPRSYTC+FC+REF+SAQALGGHMNVHRRDRA L
Sbjct: 31  GSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARL 68

[Close]
BLAST of Carg16576 vs. TAIR10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 75.5 bits (184), Expect = 3.9e-14
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 0 

Query: 68  FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRR 104
           ++ G SWPPRSYTC+FCKREFRSAQALGGHMNVHRR
Sbjct: 36  YLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRR 71

[Close]
BLAST of Carg16576 vs. TAIR10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-13
Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 0 

Query: 71  GISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL 109
           G  WPPRSY+C+FC REF+SAQALGGHMNVHRRDRA L
Sbjct: 47  GCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARL 84

[Close]
BLAST of Carg16576 vs. Swiss-Prot
Match: sp|Q9SLB8|ZFP11_ARATH (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.2e-13
Identity = 32/42 (76.19%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 72  ISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPA 114
           I WPP++YTC+FC+REFRSAQALGGHMNVHRRDRA L   P+
Sbjct: 42  IPWPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPS 83

[Close]
BLAST of Carg16576 vs. Swiss-Prot
Match: sp|O80942|ZFP10_ARATH (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.4e-13
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 71  GISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL 109
           G  WPPRSYTC+FC+REF+SAQALGGHMNVHRRDRA L
Sbjct: 31  GSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARL 68

[Close]
BLAST of Carg16576 vs. Swiss-Prot
Match: sp|Q38895|SUP_ARATH (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.0e-13
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 0 

Query: 68  FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRR 104
           ++ G SWPPRSYTC+FCKREFRSAQALGGHMNVHRR
Sbjct: 36  YLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRR 71

[Close]
BLAST of Carg16576 vs. Swiss-Prot
Match: sp|Q9LHS9|RBE_ARATH (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 2.7e-12
Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 0 

Query: 71  GISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL 109
           G  WPPRSY+C+FC REF+SAQALGGHMNVHRRDRA L
Sbjct: 47  GCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARL 84

[Close]
BLAST of Carg16576 vs. Swiss-Prot
Match: sp|Q9SR34|TAC1_ARATH (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.4e-07
Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 0 

Query: 77  RSYTCNFCKREFRSAQALGGHMNVHRRDRALL 109
           RSY C+FC R F +AQALGGHMN+HRRDRA L
Sbjct: 33  RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKL 64

[Close]
BLAST of Carg16576 vs. TrEMBL
Match: tr|A0A0A0L9Y8|A0A0A0L9Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G141870 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.9e-35
Identity = 95/145 (65.52%), Postives = 103/145 (71.03%), Query Frame = 0 

Query: 68  FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLNLHH 127
           FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPAD   FTNLNLNL H
Sbjct: 46  FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPAD-GQFTNLNLNLLH 105

Query: 128 NPFPN-----------RPFKALEIA--------KPNR------NKPHKF-IGLDIEINTT 187
           NP PN           R    L+++        KPN        K  KF IGLDIEI+TT
Sbjct: 106 NPNPNISSYDEVTFVGRKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTT 165

[Close]
BLAST of Carg16576 vs. TrEMBL
Match: tr|A0A1S3AWP0|A0A1S3AWP0_CUCME (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103483626 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.5e-28
Identity = 85/147 (57.82%), Postives = 91/147 (61.90%), Query Frame = 0 

Query: 68  FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNL---- 127
           FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPAD   FTNL      
Sbjct: 46  FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPAD-GQFTNLXXXXXX 105

Query: 128 ---------NLHHNPFPNRPFKALEI--------AKPNR------NKPHKF-IGLDIEIN 187
                    +     F  R    L++        AKPN        K  KF IGLDIEI+
Sbjct: 106 XXXXXXXXSSYDEVTFVGRKASDLKLSSMTAEIAAKPNMFERGHWKKGEKFNIGLDIEIS 165

[Close]
BLAST of Carg16576 vs. TrEMBL
Match: tr|A0A2I4DUB9|A0A2I4DUB9_9ROSI (transcriptional regulator SUPERMAN-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108983529 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 9.2e-18
Identity = 62/129 (48.06%), Postives = 79/129 (61.24%), Query Frame = 0 

Query: 68  FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA-LLYSPPADHTHFTNLNLN-- 127
           ++NG SWPPRSYTC+FCKREF+SAQALGGHMNVHRRDRA L  SPP D + F + +    
Sbjct: 48  YVNGFSWPPRSYTCSFCKREFKSAQALGGHMNVHRRDRARLRQSPPRDGSLFDSSSPKGM 107

Query: 128 LHHNPFPNRPFKALEIAKPNR--------NKPHKFIGLDIEINTTNNTATLLTESKKKDI 186
              N    + +   E    ++         KP + + LD+EI        LL++S K+DI
Sbjct: 108 ALTNTKSEKSYSGGEEFDGSKKGGGCKIFKKPDQIVRLDLEIG-------LLSDS-KEDI 167

[Close]
BLAST of Carg16576 vs. TrEMBL
Match: tr|A0A1Q3CMC2|A0A1Q3CMC2_CEPFO (Zf-C2H2_6 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_24667 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.1e-17
Identity = 49/71 (69.01%), Postives = 53/71 (74.65%), Query Frame = 0 

Query: 69  INGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA-LLYSPPADHTHFTNLNLNLHH 128
           + G SWPPRSYTCNFCKREF+SAQALGGHMNVHRRDRA L  S P D  +     LNLHH
Sbjct: 48  LGGFSWPPRSYTCNFCKREFKSAQALGGHMNVHRRDRARLRQSSPRDCQY--RSFLNLHH 107

Query: 129 NPFPNRPFKAL 139
           NP PN  F +L
Sbjct: 108 NPNPNSNFSSL 116

[Close]
BLAST of Carg16576 vs. TrEMBL
Match: tr|A0A2P4LVP4|A0A2P4LVP4_QUESU (Transcriptional regulator superman OS=Quercus suber OX=58331 GN=CFP56_48395 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.5e-17
Identity = 58/136 (42.65%), Postives = 75/136 (55.15%), Query Frame = 0 

Query: 68  FINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL--YSPPADHTHFTNL-NLN 127
           ++NG SWPP+SY C+FCKREFRSAQALGGHMNVHRRDRA L   SPP D +    +    
Sbjct: 17  YVNGFSWPPKSYICSFCKREFRSAQALGGHMNVHRRDRARLRQSSPPRDESAADEVKKWG 76

Query: 128 LHHNPFPNRPFKALEIAKPNRN---------------KPHKFIGLDIEINTTNNTATLLT 186
           L  N F +   K +++                     K  + + LD+EI    N+     
Sbjct: 77  LVGNLFGSLSHKNMDLTNMKNEKSLDRFKQEDKCKILKKSEIVRLDLEIGVLGNS----- 136

The following BLAST results are available for this feature:
BLAST of Carg16576 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022924639.11.8e-6595.16zinc finger protein 11-like [Cucurbita moschata][more]
XP_023526745.14.0e-6596.24zinc finger protein 11-like [Cucurbita pepo subsp. pepo][more]
XP_022979614.11.2e-3776.22transcriptional regulator SUPERMAN-like [Cucurbita maxima][more]
XP_004134421.14.3e-3565.52PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis sativus] >KGN56891.1... [more]
XP_008438560.12.3e-2857.82PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo][more]
BLAST of Carg16576 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G17810.15.5e-1689.47C2H2 and C2HC zinc fingers superfamily protein[more]
AT2G42410.11.8e-1476.19zinc finger protein 11[more]
AT2G37740.13.0e-1484.21zinc-finger protein 10[more]
AT3G23130.13.9e-1486.11C2H2 and C2HC zinc fingers superfamily protein[more]
AT5G06070.11.5e-1381.58C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of Carg16576 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SLB8|ZFP11_ARATH3.2e-1376.19Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1[more]
sp|O80942|ZFP10_ARATH5.4e-1384.21Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1[more]
sp|Q38895|SUP_ARATH7.0e-1386.11Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S... [more]
sp|Q9LHS9|RBE_ARATH2.7e-1281.58Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G... [more]
sp|Q9SR34|TAC1_ARATH4.4e-0775.00Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1[more]
BLAST of Carg16576 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L9Y8|A0A0A0L9Y8_CUCSA2.9e-3565.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G141870 PE=4 SV=1[more]
tr|A0A1S3AWP0|A0A1S3AWP0_CUCME1.5e-2857.82transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103483626 ... [more]
tr|A0A2I4DUB9|A0A2I4DUB9_9ROSI9.2e-1848.06transcriptional regulator SUPERMAN-like isoform X2 OS=Juglans regia OX=51240 GN=... [more]
tr|A0A1Q3CMC2|A0A1Q3CMC2_CEPFO2.1e-1769.01Zf-C2H2_6 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v... [more]
tr|A0A2P4LVP4|A0A2P4LVP4_QUESU3.5e-1742.65Transcriptional regulator superman OS=Quercus suber OX=58331 GN=CFP56_48395 PE=4... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16576-RACarg16576-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 79..101
e-value: 0.0045
score: 26.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 81..101
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 79..106
score: 11.219
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 79..102
e-value: 1.9E-6
score: 27.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..48
NoneNo IPR availablePANTHERPTHR26374:SF248C2H2-TYPE ZINC FINGER PROTEIN-RELATEDcoord: 56..128
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 56..128
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 76..106

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg16576Cla021552Watermelon (97103) v1carwmB0223
Carg16576Cla007566Watermelon (97103) v1carwmB0224
Carg16576Csa2G190780Cucumber (Chinese Long) v2carcuB0261
Carg16576Csa3G141870Cucumber (Chinese Long) v2carcuB0262
Carg16576MELO3C006453Melon (DHL92) v3.5.1carmeB0240
Carg16576MELO3C026785Melon (DHL92) v3.5.1carmeB0238
Carg16576ClCG07G000860Watermelon (Charleston Gray)carwcgB0228
Carg16576ClCG06G006780Watermelon (Charleston Gray)carwcgB0227
Carg16576CSPI03G12290Wild cucumber (PI 183967)carcpiB0266
Carg16576CSPI02G10570Wild cucumber (PI 183967)carcpiB0265
Carg16576Cucsa.255130Cucumber (Gy14) v1carcgyB0276
Carg16576Cucsa.383800Cucumber (Gy14) v1carcgyB0277
Carg16576CmaCh14G017900Cucurbita maxima (Rimu)carcmaB0325
Carg16576CmaCh08G010990Cucurbita maxima (Rimu)carcmaB0330
Carg16576CmoCh14G018270Cucurbita moschata (Rifu)carcmoB0328
Carg16576Lsi05G009970Bottle gourd (USVL1VR-Ls)carlsiB211
Carg16576Lsi09G012540Bottle gourd (USVL1VR-Ls)carlsiB209
Carg16576Lsi05G016940Bottle gourd (USVL1VR-Ls)carlsiB210
Carg16576Cp4.1LG03g10150Cucurbita pepo (Zucchini)carcpeB0334
Carg16576Cp4.1LG17g01800Cucurbita pepo (Zucchini)carcpeB0333
Carg16576Cp4.1LG15g00600Cucurbita pepo (Zucchini)carcpeB0332
Carg16576CsGy2G010580Cucumber (Gy14) v2carcgybB0250
Carg16576CsGy3G012420Cucumber (Gy14) v2carcgybB0251
Carg16576MELO3C026785.2Melon (DHL92) v3.6.1carmedB0246
Carg16576MELO3C006453.2Melon (DHL92) v3.6.1carmedB0248
Carg16576CsaV3_2G012990Cucumber (Chinese Long) v3carcucB0265
Carg16576CsaV3_3G012410Cucumber (Chinese Long) v3carcucB0266
Carg16576Cla97C05G085440Watermelon (97103) v2carwmbB0236
Carg16576BhiUN425G2Wax gourdcarwgoB0300
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg16576Carg16865Silver-seed gourdcarcarB272
Carg16576Carg10948Silver-seed gourdcarcarB275
The following block(s) are covering this gene:
GeneOrganismBlock
Carg16576Silver-seed gourdcarcarB259
Carg16576Silver-seed gourdcarcarB274
Carg16576Silver-seed gourdcarcarB273
Carg16576Cucurbita maxima (Rimu)carcmaB0324
Carg16576Cucurbita maxima (Rimu)carcmaB0326
Carg16576Cucurbita maxima (Rimu)carcmaB0327
Carg16576Cucurbita maxima (Rimu)carcmaB0329
Carg16576Cucurbita moschata (Rifu)carcmoB0329
Carg16576Cucurbita moschata (Rifu)carcmoB0332
Carg16576Cucurbita moschata (Rifu)carcmoB0333
Carg16576Cucurbita pepo (Zucchini)carcpeB0331
Carg16576Cucurbita pepo (Zucchini)carcpeB0335
Carg16576Cucurbita pepo (Zucchini)carcpeB0336
Carg16576Watermelon (Charleston Gray)carwcgB0226
Carg16576Watermelon (97103) v2carwmbB0237
Carg16576Watermelon (97103) v2carwmbB0238
Carg16576Wax gourdcarwgoB0290
Carg16576Wax gourdcarwgoB0297