CmoCh19G000840 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh19G000840
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(C2H2 type zinc finger transcription factor family protein) (Zinc finger, C2H2-type)
LocationCmo_Chr19 : 468370 .. 468879 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGTGGGAAGATTATTGCGAACGATCAAGAACAAGAACAGGAACAAGAACGACGATGGAGTTTCGTCGTAAAAGACGAAACTTTTTCGTGCAATCAATTTCAATGGCCTGCAAAGAATTATTCTTGTAATTTTTGCAAGAGGGAATTCAAGTCAGCTCAAGCTCTTGGTGGGCATATGAATGTTCATAGAAGGGATAGGGCAAGAATGAGGCTTTTGCCTTCATGGATGGCTGATAATTCTTACCCTAACCCTAATTCTTGCTTCACTTTCAAATTGAATTCCAACAACTCTTTGTGTTCCAATACTCAAGAAGAGAAGAAAGCTTTTGGGAGTTGTTCATGGAACAATTACAAGCCCTCATTCAGCTCTCAAGATGATCATGATGATGTTCTTCATGTTTTGAAGAAGAAAAAGAAGAAAAATTTAGTGAATTTAGAGCTCAAAATGGGGAATTTGGAAGATGATTCTTCAAATGAAGATCTTGATTTGGAGCTTCATCTTTGA

mRNA sequence

ATGGAGGGTGGGAAGATTATTGCGAACGATCAAGAACAAGAACAGGAACAAGAACGACGATGGAGTTTCGTCGTAAAAGACGAAACTTTTTCGTGCAATCAATTTCAATGGCCTGCAAAGAATTATTCTTGTAATTTTTGCAAGAGGGAATTCAAGTCAGCTCAAGCTCTTGGTGGGCATATGAATGTTCATAGAAGGGATAGGGCAAGAATGAGGCTTTTGCCTTCATGGATGGCTGATAATTCTTACCCTAACCCTAATTCTTGCTTCACTTTCAAATTGAATTCCAACAACTCTTTGTGTTCCAATACTCAAGAAGAGAAGAAAGCTTTTGGGAGTTGTTCATGGAACAATTACAAGCCCTCATTCAGCTCTCAAGATGATCATGATGATGTTCTTCATGTTTTGAAGAAGAAAAAGAAGAAAAATTTAGTGAATTTAGAGCTCAAAATGGGGAATTTGGAAGATGATTCTTCAAATGAAGATCTTGATTTGGAGCTTCATCTTTGA

Coding sequence (CDS)

ATGGAGGGTGGGAAGATTATTGCGAACGATCAAGAACAAGAACAGGAACAAGAACGACGATGGAGTTTCGTCGTAAAAGACGAAACTTTTTCGTGCAATCAATTTCAATGGCCTGCAAAGAATTATTCTTGTAATTTTTGCAAGAGGGAATTCAAGTCAGCTCAAGCTCTTGGTGGGCATATGAATGTTCATAGAAGGGATAGGGCAAGAATGAGGCTTTTGCCTTCATGGATGGCTGATAATTCTTACCCTAACCCTAATTCTTGCTTCACTTTCAAATTGAATTCCAACAACTCTTTGTGTTCCAATACTCAAGAAGAGAAGAAAGCTTTTGGGAGTTGTTCATGGAACAATTACAAGCCCTCATTCAGCTCTCAAGATGATCATGATGATGTTCTTCATGTTTTGAAGAAGAAAAAGAAGAAAAATTTAGTGAATTTAGAGCTCAAAATGGGGAATTTGGAAGATGATTCTTCAAATGAAGATCTTGATTTGGAGCTTCATCTTTGA
Homology
[Close]
BLAST of CmoCh19G000840 vs. Swiss-Prot
Match: SUP_ARATH (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.0e-15
Identity = 39/66 (59.09%), Postives = 50/66 (75.76%), Query Frame = 1 

Query: 35  FQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNS----YPNPNSCF 94
           F WP ++Y+C+FCKREF+SAQALGGHMNVHRRDRAR+RL  S  + ++    YPNPN  +
Sbjct: 40  FSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYSY 99

Query: 95  TFKLNS 97
           +   NS
Sbjct: 100 STMANS 105

[Close]
BLAST of CmoCh19G000840 vs. Swiss-Prot
Match: RBE_ARATH (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-09
Identity = 57/169 (33.73%), Postives = 75/169 (44.38%), Query Frame = 1 

Query: 37  WPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNSYPNPNSCFTFKLNS 96
           WP ++YSC+FC REFKSAQALGGHMNVHRRDRAR++      +      P  C   +   
Sbjct: 50  WPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTDQATPPECDRQQQVL 109

Query: 97  NNSLCSNTQEE-------KKAFGSCSWNNYKPSFSSQDDHD--DVLHVLKK--------K 156
           +       QEE       K+       NN   S   + +HD  +V   L           
Sbjct: 110 DVGSKVLVQEETRKPNGTKREISDVCNNNVLESSMKRYEHDNGEVKTDLSVGLLSTEFDP 169

Query: 157 KKKNLVN-------------------LELKMGNLEDDSSNEDLDLELHL 170
           +KK L+N                   L L +G  E +  +E+LDLEL L
Sbjct: 170 RKKQLINGSSSSWKRAKTDVSRFPMMLGLVIGISEINGHHEELDLELRL 218

[Close]
BLAST of CmoCh19G000840 vs. Swiss-Prot
Match: TAC1_ARATH (Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.2e-07
Identity = 22/34 (64.71%), Postives = 30/34 (88.24%), Query Frame = 1 

Query: 39 AKNYSCNFCKREFKSAQALGGHMNVHRRDRARMR 73
          +++Y C+FC R F +AQALGGHMN+HRRDRA++R
Sbjct: 32 SRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLR 65

[Close]
BLAST of CmoCh19G000840 vs. TrEMBL
Match: A0A0A0L7I0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G392775 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.5e-48
Identity = 118/188 (62.77%), Postives = 137/188 (72.87%), Query Frame = 1 

Query: 9   NDQEQEQEQERRWSFVVKDETFSCNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDR 68
           N ++Q+Q+Q+R ++   K+ TFS N+FQWPAKNY CNFCKREFKSAQALGGHMNVHRRDR
Sbjct: 45  NGKQQQQQQQRGYA---KEGTFSSNEFQWPAKNYGCNFCKREFKSAQALGGHMNVHRRDR 104

Query: 69  ARMRLLPSWMADNSY-------PNPN------SCFTFKLNSN-NSLCSNTQ-EEKKAFGS 128
           ARMRLLPSW++DN+Y       PNPN      SCF F+ +SN NSLCS+ Q ++KK  GS
Sbjct: 105 ARMRLLPSWVSDNNYNNNYYSCPNPNFSNFSPSCFNFRSSSNKNSLCSSLQDQDKKEIGS 164

Query: 129 CSWNN--YKPSF---------SSQDDHDDVLHVLKKKKKKNLVNLELKMGNLEDDSS-NE 170
           CSWNN  YKPS             DD D VLHV  KKKKK +VNLELKMG+L D SS NE
Sbjct: 165 CSWNNNIYKPSSLVVPHDDQEHVDDDADQVLHVF-KKKKKGMVNLELKMGSLGDASSNNE 224

[Close]
BLAST of CmoCh19G000840 vs. TrEMBL
Match: A0A0D2NY19_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G247700 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-16
Identity = 69/168 (41.07%), Postives = 97/168 (57.74%), Query Frame = 1 

Query: 27  DETFSCNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARM-----------RLLP 86
           +E + C    WP ++Y+C+FCKREF+SAQALGGHMNVHRR+RAR+           +  P
Sbjct: 29  EEDYVCGGISWPPRSYTCSFCKREFRSAQALGGHMNVHRRERARLLRQSSTPPGDYKDQP 88

Query: 87  SWMADNSYPNPN-------------SCFTFKLNSNNSLCSNTQEEKKAFGSCSWNNYKPS 146
           S++  N  PNPN             S     L+S++S  SN  ++ +  G+ S    K  
Sbjct: 89  SFLNLNPNPNPNFRSSSSLIAPSFCSTLPHHLSSSSSGFSNEMKKWRRKGAKSVFQVK-E 148

Query: 147 FSSQDDHDDVLHVLKKKKKKN-LVNLELKMGNLEDDSSNEDLDLELHL 170
           F   + +++  ++LKKKKK N  V LEL++G + D  SNEDLDLEL L
Sbjct: 149 FKDYECNNN--NLLKKKKKINESVRLELEVGVVRD--SNEDLDLELRL 191

[Close]
BLAST of CmoCh19G000840 vs. TrEMBL
Match: M5VLU7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb024794mg PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.5e-16
Identity = 59/152 (38.82%), Postives = 85/152 (55.92%), Query Frame = 1 

Query: 37  WPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADN---SYPNPNSCFTFK 96
           W AKNY+C+FCKREF+SAQALGGHMNVHRRDRAR+RLLP  ++       PNP+S F+  
Sbjct: 18  WAAKNYACSFCKREFRSAQALGGHMNVHRRDRARLRLLPPSLSSEICPHNPNPSSYFSPS 77

Query: 97  LNSNNSLCSNTQEEKKAFGSC-----------------SWNNYKPSFSSQDDHDDVLHVL 156
            +S++S  S+++     + SC                 +  N KP F      + V +++
Sbjct: 78  SSSSSSSLSSSKGLPHNYSSCHSLLSPSLRALMSATSSTDGNKKPKFKYNSPQNHVPNLI 137

Query: 157 KKKKKKNLVNLELKMGNLEDDSSNEDLDLELH 169
            KK K+  V+ E   G +    + +DLD E +
Sbjct: 138 PKKGKRGAVDHE--AGEILKGFAQKDLDDEFN 167

[Close]
BLAST of CmoCh19G000840 vs. TrEMBL
Match: V4VV39_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10023342mg PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.1e-15
Identity = 42/72 (58.33%), Postives = 51/72 (70.83%), Query Frame = 1 

Query: 31  SCNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNSYPNPNSCF 90
           SC    WP KNY+C+FC+REF+SAQALGGHMNVHRRDRAR+R+LP  +     PNP   F
Sbjct: 33  SCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDRARLRMLPPPLLQYRNPNPIPSF 92

Query: 91  TFKLNSNNSLCS 103
                S++SL S
Sbjct: 93  AASSTSSSSLSS 104

[Close]
BLAST of CmoCh19G000840 vs. TrEMBL
Match: A0A067FM45_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0481742mg PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.1e-15
Identity = 42/72 (58.33%), Postives = 51/72 (70.83%), Query Frame = 1 

Query: 31  SCNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNSYPNPNSCF 90
           SC    WP KNY+C+FC+REF+SAQALGGHMNVHRRDRAR+R+LP  +     PNP   F
Sbjct: 895 SCGLIVWPPKNYNCSFCRREFRSAQALGGHMNVHRRDRARLRMLPPPLLQYRNPNPIPSF 954

Query: 91  TFKLNSNNSLCS 103
                S++SL S
Sbjct: 955 AASSTSSSSLSS 966

[Close]
BLAST of CmoCh19G000840 vs. TAIR10
Match: AT3G23130.1 (AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 84.7 bits (208), Expect = 5.9e-17
Identity = 39/66 (59.09%), Postives = 50/66 (75.76%), Query Frame = 1 

Query: 35  FQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNS----YPNPNSCF 94
           F WP ++Y+C+FCKREF+SAQALGGHMNVHRRDRAR+RL  S  + ++    YPNPN  +
Sbjct: 40  FSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPNYSY 99

Query: 95  TFKLNS 97
           +   NS
Sbjct: 100 STMANS 105

[Close]
BLAST of CmoCh19G000840 vs. TAIR10
Match: AT2G42410.1 (AT2G42410.1 zinc finger protein 11)

HSP 1 Score: 79.7 bits (195), Expect = 1.9e-15
Identity = 57/179 (31.84%), Postives = 94/179 (52.51%), Query Frame = 1 

Query: 11  QEQEQEQERRWSFVVKD--ETFSCNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDR 70
           QE+E E     + V+ +  + +      WP KNY+C+FC+REF+SAQALGGHMNVHRRDR
Sbjct: 16  QEEEGEDGNGDNRVIMNHYKNYEAGLIPWPPKNYTCSFCRREFRSAQALGGHMNVHRRDR 75

Query: 71  ARMRLLPSWMADNSY----PNPNSCFTFKLNSNNSLC------SNTQEEKKAFGSCSWNN 130
           A++R +PSW+ +  +     NPN  F+   +S+ +        +N + +   F S  ++ 
Sbjct: 76  AKLRQIPSWLFEPHHHTPIANPNPNFSSSSSSSTTTAHLEPSLTNQRSKTTPFPSARFDL 135

Query: 131 YKPSFS----SQDDHDDVLHVLKKKKKKNL------VNLELKMGNLEDDSSNEDLDLEL 168
              + S      D   +  +V  ++ KK+       V  E+  G+L +   ++ + LEL
Sbjct: 136 LDSTTSYGGLMMDREKNKSNVCSREIKKSAIDACHSVRCEISRGDLMNKKDDQVMGLEL 194

[Close]
BLAST of CmoCh19G000840 vs. TAIR10
Match: AT2G37740.1 (AT2G37740.1 zinc-finger protein 10)

HSP 1 Score: 74.7 bits (182), Expect = 6.1e-14
Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 1 

Query: 37  WPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMR------LLPSWMADNSYP------ 96
           WP ++Y+C+FC+REFKSAQALGGHMNVHRRDRAR++      L P   +   YP      
Sbjct: 34  WPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADDQYLFPKSSSSPEYPSHKDSD 93

[Close]
BLAST of CmoCh19G000840 vs. TAIR10
Match: AT4G17810.1 (AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 70.9 bits (172), Expect = 8.7e-13
Identity = 37/76 (48.68%), Postives = 50/76 (65.79%), Query Frame = 1 

Query: 1  MEGGKIIANDQEQEQEQERRWSFVVK----DETFSCNQFQWPAKNYSCNFCKREFKSAQA 60
          M GG  + N  + E+ ++   S+ VK    D   + +   WP ++Y+CNFC+REF+SAQA
Sbjct: 1  MNGGAWMWNPNKIEELEDDDESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQA 60

Query: 61 LGGHMNVHRRDRARMR 73
          LGGHMNVHRRDRA  R
Sbjct: 61 LGGHMNVHRRDRASSR 76

[Close]
BLAST of CmoCh19G000840 vs. TAIR10
Match: AT5G06070.1 (AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 8.2e-11
Identity = 57/169 (33.73%), Postives = 75/169 (44.38%), Query Frame = 1 

Query: 37  WPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNSYPNPNSCFTFKLNS 96
           WP ++YSC+FC REFKSAQALGGHMNVHRRDRAR++      +      P  C   +   
Sbjct: 50  WPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTDQATPPECDRQQQVL 109

Query: 97  NNSLCSNTQEE-------KKAFGSCSWNNYKPSFSSQDDHD--DVLHVLKK--------K 156
           +       QEE       K+       NN   S   + +HD  +V   L           
Sbjct: 110 DVGSKVLVQEETRKPNGTKREISDVCNNNVLESSMKRYEHDNGEVKTDLSVGLLSTEFDP 169

Query: 157 KKKNLVN-------------------LELKMGNLEDDSSNEDLDLELHL 170
           +KK L+N                   L L +G  E +  +E+LDLEL L
Sbjct: 170 RKKQLINGSSSSWKRAKTDVSRFPMMLGLVIGISEINGHHEELDLELRL 218

[Close]
BLAST of CmoCh19G000840 vs. NCBI nr
Match: gi|659109369|ref|XP_008454679.1| (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo])

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-49
Identity = 123/200 (61.50%), Postives = 144/200 (72.00%), Query Frame = 1 

Query: 1   MEGGKIIAND-----QEQEQEQERRWSFVVKDETFSCNQFQWPAKNYSCNFCKREFKSAQ 60
           M+ G  ++N+     Q+Q+Q+Q+R +   VK+ TFS N+FQWPAKNY CNFCKREFKSAQ
Sbjct: 1   MDNGAYMSNNTNNGKQQQQQQQQRGY---VKEGTFSSNEFQWPAKNYGCNFCKREFKSAQ 60

Query: 61  ALGGHMNVHRRDRARMRLLPSWMADNSY-------PNPN------SCFTFKLNSN-NSLC 120
           ALGGHMNVHRRDRARMRLLPSW++DN+Y       PNPN      SCF F+ +SN NSLC
Sbjct: 61  ALGGHMNVHRRDRARMRLLPSWVSDNNYNNNYYSCPNPNFPNFSPSCFNFRSSSNKNSLC 120

Query: 121 SNTQEE-KKAFGSCSWNN-YKPSF---------SSQDDHDDVLHVLKKKKKKNLVNLELK 170
           S+ Q++ KK  GSCSWNN YKPS             DD D VLHV K KKKK+LVNLELK
Sbjct: 121 SSLQDQDKKEIGSCSWNNNYKPSSLFVPHDDQEHVGDDSDQVLHVFK-KKKKSLVNLELK 180

[Close]
BLAST of CmoCh19G000840 vs. NCBI nr
Match: gi|778688627|ref|XP_011652797.1| (PREDICTED: uncharacterized protein LOC101216448 [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 3.5e-48
Identity = 118/188 (62.77%), Postives = 137/188 (72.87%), Query Frame = 1 

Query: 9   NDQEQEQEQERRWSFVVKDETFSCNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDR 68
           N ++Q+Q+Q+R ++   K+ TFS N+FQWPAKNY CNFCKREFKSAQALGGHMNVHRRDR
Sbjct: 139 NGKQQQQQQQRGYA---KEGTFSSNEFQWPAKNYGCNFCKREFKSAQALGGHMNVHRRDR 198

Query: 69  ARMRLLPSWMADNSY-------PNPN------SCFTFKLNSN-NSLCSNTQ-EEKKAFGS 128
           ARMRLLPSW++DN+Y       PNPN      SCF F+ +SN NSLCS+ Q ++KK  GS
Sbjct: 199 ARMRLLPSWVSDNNYNNNYYSCPNPNFSNFSPSCFNFRSSSNKNSLCSSLQDQDKKEIGS 258

Query: 129 CSWNN--YKPSF---------SSQDDHDDVLHVLKKKKKKNLVNLELKMGNLEDDSS-NE 170
           CSWNN  YKPS             DD D VLHV  KKKKK +VNLELKMG+L D SS NE
Sbjct: 259 CSWNNNIYKPSSLVVPHDDQEHVDDDADQVLHVF-KKKKKGMVNLELKMGSLGDASSNNE 318

[Close]
BLAST of CmoCh19G000840 vs. NCBI nr
Match: gi|700202792|gb|KGN57925.1| (hypothetical protein Csa_3G392775 [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 3.5e-48
Identity = 118/188 (62.77%), Postives = 137/188 (72.87%), Query Frame = 1 

Query: 9   NDQEQEQEQERRWSFVVKDETFSCNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDR 68
           N ++Q+Q+Q+R ++   K+ TFS N+FQWPAKNY CNFCKREFKSAQALGGHMNVHRRDR
Sbjct: 45  NGKQQQQQQQRGYA---KEGTFSSNEFQWPAKNYGCNFCKREFKSAQALGGHMNVHRRDR 104

Query: 69  ARMRLLPSWMADNSY-------PNPN------SCFTFKLNSN-NSLCSNTQ-EEKKAFGS 128
           ARMRLLPSW++DN+Y       PNPN      SCF F+ +SN NSLCS+ Q ++KK  GS
Sbjct: 105 ARMRLLPSWVSDNNYNNNYYSCPNPNFSNFSPSCFNFRSSSNKNSLCSSLQDQDKKEIGS 164

Query: 129 CSWNN--YKPSF---------SSQDDHDDVLHVLKKKKKKNLVNLELKMGNLEDDSS-NE 170
           CSWNN  YKPS             DD D VLHV  KKKKK +VNLELKMG+L D SS NE
Sbjct: 165 CSWNNNIYKPSSLVVPHDDQEHVDDDADQVLHVF-KKKKKGMVNLELKMGSLGDASSNNE 224

[Close]
BLAST of CmoCh19G000840 vs. NCBI nr
Match: gi|747067174|ref|XP_011080293.1| (PREDICTED: transcriptional regulator SUPERMAN-like [Sesamum indicum])

HSP 1 Score: 99.4 bits (246), Expect = 6.5e-18
Identity = 68/181 (37.57%), Postives = 95/181 (52.49%), Query Frame = 1 

Query: 26  KDETFSCNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSWMADNSYPN 85
           KD T+    F WP +NY C+FCK+EFKSAQALGGHMNVHRRDRARMRL PSW +    PN
Sbjct: 27  KDRTYG---FSWPQRNYRCSFCKKEFKSAQALGGHMNVHRRDRARMRLSPSWDSQIPNPN 86

Query: 86  PNSCFTFKLNSNNSLCSNTQEEKKAFGSCSWNNYKPSFS--SQDDHD------------- 145
           PN   +F L+S+  L  +   +   + S S +++ P++S  S   H              
Sbjct: 87  PNPNPSFSLSSSTRLRPSV-AKFSPYNSISCHSFLPNYSPPSASQHQEKPVPAVIERSIT 146

Query: 146 -----------------DVLHVLKKKKKK-----NLVNLELKMGNLEDDSSNEDLDLELH 170
                            DV  + +++  +       V L+L +G L+ D+ ++DLDLEL 
Sbjct: 147 AFRGGERGKTTAKGTMLDVTSLARRRDARVWTASEFVRLDLNLGLLQ-DTKDQDLDLELR 202

[Close]
BLAST of CmoCh19G000840 vs. NCBI nr
Match: gi|823166712|ref|XP_012483307.1| (PREDICTED: transcriptional regulator SUPERMAN-like [Gossypium raimondii])

HSP 1 Score: 94.7 bits (234), Expect = 1.6e-16
Identity = 69/168 (41.07%), Postives = 97/168 (57.74%), Query Frame = 1 

Query: 27  DETFSCNQFQWPAKNYSCNFCKREFKSAQALGGHMNVHRRDRARM-----------RLLP 86
           +E + C    WP ++Y+C+FCKREF+SAQALGGHMNVHRR+RAR+           +  P
Sbjct: 29  EEDYVCGGISWPPRSYTCSFCKREFRSAQALGGHMNVHRRERARLLRQSSTPPGDYKDQP 88

Query: 87  SWMADNSYPNPN-------------SCFTFKLNSNNSLCSNTQEEKKAFGSCSWNNYKPS 146
           S++  N  PNPN             S     L+S++S  SN  ++ +  G+ S    K  
Sbjct: 89  SFLNLNPNPNPNFRSSSSLIAPSFCSTLPHHLSSSSSGFSNEMKKWRRKGAKSVFQVK-E 148

Query: 147 FSSQDDHDDVLHVLKKKKKKN-LVNLELKMGNLEDDSSNEDLDLELHL 170
           F   + +++  ++LKKKKK N  V LEL++G + D  SNEDLDLEL L
Sbjct: 149 FKDYECNNN--NLLKKKKKINESVRLELEVGVVRD--SNEDLDLELRL 191

The following BLAST results are available for this feature:
BLAST of CmoCh19G000840 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SUP_ARATH1.0e-1559.09Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1[more]
RBE_ARATH1.5e-0933.73Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE... [more]
TAC1_ARATH5.2e-0764.71Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1[more]
BLAST of CmoCh19G000840 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7I0_CUCSA2.5e-4862.77Uncharacterized protein OS=Cucumis sativus GN=Csa_3G392775 PE=4 SV=1[more]
A0A0D2NY19_GOSRA1.1e-1641.07Uncharacterized protein OS=Gossypium raimondii GN=B456_006G247700 PE=4 SV=1[more]
M5VLU7_PRUPE9.5e-1638.82Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb024794mg PE=4 SV=1[more]
V4VV39_9ROSI2.1e-1558.33Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10023342mg PE=... [more]
A0A067FM45_CITSI2.1e-1558.33Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0481742mg PE=4 ... [more]
BLAST of CmoCh19G000840 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G23130.15.9e-1759.09 C2H2 and C2HC zinc fingers superfamily protein[more]
AT2G42410.11.9e-1531.84 zinc finger protein 11[more]
AT2G37740.16.1e-1448.65 zinc-finger protein 10[more]
AT4G17810.18.7e-1348.68 C2H2 and C2HC zinc fingers superfamily protein[more]
AT5G06070.18.2e-1133.73 C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of CmoCh19G000840 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659109369|ref|XP_008454679.1|2.5e-4961.50PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo][more]
gi|778688627|ref|XP_011652797.1|3.5e-4862.77PREDICTED: uncharacterized protein LOC101216448 [Cucumis sativus][more]
gi|700202792|gb|KGN57925.1|3.5e-4862.77hypothetical protein Csa_3G392775 [Cucumis sativus][more]
gi|747067174|ref|XP_011080293.1|6.5e-1837.57PREDICTED: transcriptional regulator SUPERMAN-like [Sesamum indicum][more]
gi|823166712|ref|XP_012483307.1|1.6e-1641.07PREDICTED: transcriptional regulator SUPERMAN-like [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
IPR013087Znf_C2H2_type
IPR015880Zinc finger, C2H2-like
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0097159 organic cyclic compound binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G000840.1CmoCh19G000840.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PFAMPF13912zf-C2H2_6coord: 42..65
score: 6.
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 44..64
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 42..69
score: 11
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 40..67
score: 2.
IPR015880Zinc finger, C2H2-likeSMARTSM00355c2h2final6coord: 42..64
score: 0.
NoneNo IPR availableunknownCoilCoilcoord: 137..157
scor
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 35..167
score: 4.7
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 39..69
score: 7.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh19G000840Cucsa.383800Cucumber (Gy14) v1cgycmoB1056
CmoCh19G000840CmaCh02G017600Cucurbita maxima (Rimu)cmacmoB598
CmoCh19G000840Cla007566Watermelon (97103) v1cmowmB500
CmoCh19G000840Cla005998Watermelon (97103) v1cmowmB485
CmoCh19G000840Csa2G190780Cucumber (Chinese Long) v2cmocuB497
CmoCh19G000840MELO3C026785Melon (DHL92) v3.5.1cmomeB467
CmoCh19G000840ClCG06G006780Watermelon (Charleston Gray)cmowcgB465
CmoCh19G000840ClCG07G000860Watermelon (Charleston Gray)cmowcgB466
CmoCh19G000840CSPI02G10570Wild cucumber (PI 183967)cmocpiB503
CmoCh19G000840Lsi05G009970Bottle gourd (USVL1VR-Ls)cmolsiB470
CmoCh19G000840Cp4.1LG15g00600Cucurbita pepo (Zucchini)cmocpeB481
CmoCh19G000840Cp4.1LG03g10150Cucurbita pepo (Zucchini)cmocpeB491
CmoCh19G000840Cp4.1LG05g01460Cucurbita pepo (Zucchini)cmocpeB498
CmoCh19G000840MELO3C006453.2Melon (DHL92) v3.6.1cmomedB546
CmoCh19G000840CsaV3_3G012410Cucumber (Chinese Long) v3cmocucB0606
CmoCh19G000840Cla97C07G129150Watermelon (97103) v2cmowmbB521
CmoCh19G000840Bhi05G000173Wax gourdcmowgoB0654
CmoCh19G000840Carg16865Silver-seed gourdcarcmoB1021
CmoCh19G000840Carg08976Silver-seed gourdcarcmoB1055
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh19G000840CmoCh14G018270Cucurbita moschata (Rifu)cmocmoB207
CmoCh19G000840CmoCh02G018050Cucurbita moschata (Rifu)cmocmoB387
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh19G000840Silver-seed gourdcarcmoB1286
CmoCh19G000840Cucurbita maxima (Rimu)cmacmoB508
CmoCh19G000840Wild cucumber (PI 183967)cmocpiB513