Cucsa.356420 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.356420
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Antigen receptor-like protein
Location	scaffold03577 : 1223864 .. 1225303 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTGGGCATCTTCCAGATGGGTGCAGTAATTTTGCACTCCAGATTATTGACAACAGCGAATTATAGCCCTCAAGGATCATGTCTTACCAATATGCCCTGCCTAATCCACTACTGGGGCTATGAGGCTATCTTTAATGGACGCAGTTCAAGCTTTCTCCTGAAATCTGCACCATTTCCTCAAAAAaGGTACAAGTGGAGTTTTTAAACTTGTATCACGCCTTGTTAAGAGGCCTGCGCTATTTTTCTTGCGTATATTTCCATTTTAATTGTTGAATCCTTGGGTAATTAGATGACTGCTTATATTATATTGAGAACTAGAGAGGAATATTAGTTCTTAGAGAGATTGGAAGATCTTGGGTGGAGGTCAGAGCCGTCGCTAGGTTTAAAGCATCTGTACGGGTGTATCCACTCTTTGTTTGTAATTACCAGCTTGGTTTCATTCTTTTGGATTGGAGTCGGCTCTCCTAATTTTTGTTAGGATCAGTGTTTCAAAAGCCCGCTTGGAGGCGCACGCCTAGGCTCAATGCTCAAGGGTCAAGTTTAGCGCCTTGGATTGAAAAAGCAAGGCTCATGAAATAAGGCACGCCTTAGGTGCACGAAATAAGGCACGCCTTAGGTGCACGAAATAAGGCACGCCTTAGGTGCACGAAATAAGGCACGCCTTAGGTGCACGCCTTTTGTGATGTCCCATGGCTCACAGCCCTGGCCGTTGGGGCTTTTTCATTATTTCTAATAAAaGTAATAATTAGGGTTTTTtCCTTCTTTATTAACTAAAATGATTAAATTTAGTAAGCCCAAATGCAATTTCTTGTGTTTATTGGGTTTCCTTTTCCTATATGTCCACTTTAACCATGCTTTCTCATGAATGTAGTATGTTTATATATAATGCGCCTCATTAAAGAACTATTGCGTTGAGCCCTAAAAACTATTGCGCTAAGCCCTAAAGAGTATTGCGTTTTCTTGTGGGTTGAGGATTAAGAAACACTGGTTGGTTCTTTGACTCCTTATGTCATGTGAAATTGTTCTTTTGTATCTTCTTGTGCATTCTTTCATTTTTCTCAACAAAAGCTCGGTTTCGTATGAAAGGAAGTTTATATATTAATGCTGTTATGAACCTGTTTGTGATGTTACTTGTTACAGTCTCCAGACGAGTAGACATGCCAATAAATTAGCCTTTGCATTAGATACAGGTGGGGTATCTAGTAGTGGTGGGGGAGACAACATCGACGATGGTGATGAGTCCAATCTGGGTCGTACTCGATTAGGCAGGCTAGTTAGTTCAGGTGCCAGACAGTTGCTGGAAAAACTGAACTCAGCGAGAAAAAACTTTCCTACAAAGATATTTTTGCTTCTTTTGGGTTTCTACACAGCAAATGCACTTGCTACAATTCTTGGACAGACGGGTGATTGGGATGTTTTGGTTGCTGGTGTGGTG

mRNA sequence

ATGGAAGTGGGCATCTTCCAGATGGGTGCAGTAATTTTGCACTCCAGATTATTGACAACAGCGAATTATAGCCCTCAAGGATCATGTCTTACCAATATGCCCTGCCTAATCCACTACTGGGGCTATGAGGCTATCTTTAATGGACGCAGTTCAAGCTTTCTCCTGAAATCTGCACCATTTCCTCAAAAAAGTCTCCAGACGAGTAGACATGCCAATAAATTAGCCTTTGCATTAGATACAGGTGGGGTATCTAGTAGTGGTGGGGGAGACAACATCGACGATGGTGATGAGTCCAATCTGGGTCGTACTCGATTAGGCAGGCTAGTTAGTTCAGGTGCCAGACAGTTGCTGGAAAAACTGAACTCAGCGAGAAAAAACTTTCCTACAAAGATATTTTTGCTTCTTTTGGGTTTCTACACAGCAAATGCACTTGCTACAATTCTTGGACAGACGGGTGATTGGGATGTTTTGGTTGCTGGTGTGGTG

Coding sequence (CDS)

ATGGAAGTGGGCATCTTCCAGATGGGTGCAGTAATTTTGCACTCCAGATTATTGACAACAGCGAATTATAGCCCTCAAGGATCATGTCTTACCAATATGCCCTGCCTAATCCACTACTGGGGCTATGAGGCTATCTTTAATGGACGCAGTTCAAGCTTTCTCCTGAAATCTGCACCATTTCCTCAAAAAaGTCTCCAGACGAGTAGACATGCCAATAAATTAGCCTTTGCATTAGATACAGGTGGGGTATCTAGTAGTGGTGGGGGAGACAACATCGACGATGGTGATGAGTCCAATCTGGGTCGTACTCGATTAGGCAGGCTAGTTAGTTCAGGTGCCAGACAGTTGCTGGAAAAACTGAACTCAGCGAGAAAAAACTTTCCTACAAAGATATTTTTGCTTCTTTTGGGTTTCTACACAGCAAATGCACTTGCTACAATTCTTGGACAGACGGGTGATTGGGATGTTTTGGTTGCTGGTGTGGTG

Protein sequence

MEVGIFQMGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPFPQKSLQTSRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV

Homology

[Close]

BLAST of Cucsa.356420 vs. Swiss-Prot
Match: YC20L_ARATH (Ycf20-like protein OS=Arabidopsis thaliana GN=At1g65420 PE=2 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 5.3e-33
Identity = 73/115 (63.48%), Postives = 86/115 (74.78%), Query Frame = 1


Query: 49  RSSSFLLKSAPFPQKSLQTSRHANKLAFALDTGGVSSSGGGDNID-DGDESNLGRTRLGR 108
           ++SS  L S P+P KS Q  R   K+AFALDTG       G+  + +GD + LG TRLGR
Sbjct: 32  KASSITLTSFPYPMKSFQIRRPNRKIAFALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGR 91

Query: 109 LVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 163
           +  +G +QLL K+NSARKNFP KIFLLLLGFYTANALATILGQTGDWDVLVAG+V
Sbjct: 92  IAIAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIV 146

[Close]

BLAST of Cucsa.356420 vs. Swiss-Prot
Match: YCF20_MESVI (Uncharacterized protein ycf20 OS=Mesostigma viride GN=ycf20 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 1


Query: 100 LGRTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVA 159
           +  TRL    ++  + L  K+ +   NFP KI LLLLGF+ A  LAT+ GQTGDWDVLVA
Sbjct: 1   MSNTRLTLFFTNIFQLLDSKIQNYSINFPIKILLLLLGFFIATVLATVFGQTGDWDVLVA 60

Query: 160 GVV 163
           G++
Sbjct: 61  GIL 63

[Close]

BLAST of Cucsa.356420 vs. TrEMBL
Match: A0A0A0LXR2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652280 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 4.6e-84
Identity = 159/162 (98.15%), Postives = 160/162 (98.77%), Query Frame = 1


Query: 1   MEVGIFQMGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPF 60
           MEVGIFQMGAVILHSRLLTTANYSPQ SCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPF
Sbjct: 1   MEVGIFQMGAVILHSRLLTTANYSPQVSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPF 60

Query: 61  PQKSLQTSRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKL 120
           P+KSLQTSRH NKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKL
Sbjct: 61  PRKSLQTSRHVNKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKL 120

Query: 121 NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 163
           NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV
Sbjct: 121 NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 162

[Close]

BLAST of Cucsa.356420 vs. TrEMBL
Match: A0A061EXE3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_025117 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.7e-43
Identity = 99/157 (63.06%), Postives = 115/157 (73.25%), Query Frame = 1


Query: 7   QMGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPFPQKSLQ 66
           Q+G + L + L    N   + SC+T   C I  W  E    G++S   LKSA FP+KS  
Sbjct: 4   QVGRMYLQAGLSILENEVLESSCMTLATCAIQRWIIEPSICGQASKIGLKSALFPKKSFS 63

Query: 67  T-SRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARK 126
           T  RH  K+AFALDTGGVS  GG D+++  D SNLG TRLGR+VS+G+RQLLEKLNSARK
Sbjct: 64  TRKRHGWKIAFALDTGGVSGDGGEDSLNS-DSSNLGGTRLGRIVSAGSRQLLEKLNSARK 123

Query: 127 NFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 163
           NFP K+FLLLLGFYTANALATILGQTGDWDVLVAGVV
Sbjct: 124 NFPMKVFLLLLGFYTANALATILGQTGDWDVLVAGVV 159

[Close]

BLAST of Cucsa.356420 vs. TrEMBL
Match: D7U6I2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00110 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-42
Identity = 96/157 (61.15%), Postives = 116/157 (73.89%), Query Frame = 1


Query: 7   QMGAVILHSRLLTTANYSPQGSCLT-NMPCLIHYWGYEAIFNGRSSSFLLKSAPFPQKSL 66
           +MG ++L S L    + S   S +T    C I  W  E  F+G+ S   +KSAPFP+KS 
Sbjct: 20  RMGGIMLQSTLSVPESESSDCSYITFTTCCTIQNWNNEPSFSGQISKLGMKSAPFPRKSF 79

Query: 67  QTSRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARK 126
           QT RH  K AFALDTGG+  +GG +N++ G+  +LG+TRLGR+VS+G RQLL KLNSARK
Sbjct: 80  QTRRHGWKTAFALDTGGIPDNGGQENLN-GNGPDLGQTRLGRIVSAGGRQLLAKLNSARK 139

Query: 127 NFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 163
           NFP K+FLLLLGFYTANALATILGQTGDWDVLVAGVV
Sbjct: 140 NFPMKVFLLLLGFYTANALATILGQTGDWDVLVAGVV 175

[Close]

BLAST of Cucsa.356420 vs. TrEMBL
Match: A0A0D2QHN5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G088400 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.8e-41
Identity = 98/156 (62.82%), Postives = 111/156 (71.15%), Query Frame = 1


Query: 7   QMGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPFPQKSLQ 66
           Q+G + L + L  + N     SCLT   C I  W  E   +G+SS   LKS  FP+KS  
Sbjct: 8   QVGRINLQAGLSISENDVVASSCLTLATCAIQRWSNELSLSGQSSKIGLKSLTFPKKS-S 67

Query: 67  TSRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKN 126
           T RH  K+A ALDTGGV   G G++  + D SNLG TRLGR+VS+G RQLLEKLNSARKN
Sbjct: 68  TQRHGWKIALALDTGGVP--GNGEDSLNSDSSNLGGTRLGRIVSAGGRQLLEKLNSARKN 127

Query: 127 FPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 163
           FP KIFLLLLGFYTANALATILGQTGDWDVLVAGVV
Sbjct: 128 FPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 160

[Close]

BLAST of Cucsa.356420 vs. TrEMBL
Match: A0A0D2QQF2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G088400 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.8e-41
Identity = 98/156 (62.82%), Postives = 111/156 (71.15%), Query Frame = 1


Query: 7   QMGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPFPQKSLQ 66
           Q+G + L + L  + N     SCLT   C I  W  E   +G+SS   LKS  FP+KS  
Sbjct: 8   QVGRINLQAGLSISENDVVASSCLTLATCAIQRWSNELSLSGQSSKIGLKSLTFPKKS-S 67

Query: 67  TSRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKN 126
           T RH  K+A ALDTGGV   G G++  + D SNLG TRLGR+VS+G RQLLEKLNSARKN
Sbjct: 68  TQRHGWKIALALDTGGVP--GNGEDSLNSDSSNLGGTRLGRIVSAGGRQLLEKLNSARKN 127

Query: 127 FPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 163
           FP KIFLLLLGFYTANALATILGQTGDWDVLVAGVV
Sbjct: 128 FPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 160

[Close]

BLAST of Cucsa.356420 vs. TAIR10
Match: AT1G65420.1 (AT1G65420.1 Protein of unknown function (DUF565))

HSP 1 Score: 142.1 bits (357), Expect = 3.0e-34
Identity = 73/115 (63.48%), Postives = 86/115 (74.78%), Query Frame = 1


Query: 49  RSSSFLLKSAPFPQKSLQTSRHANKLAFALDTGGVSSSGGGDNID-DGDESNLGRTRLGR 108
           ++SS  L S P+P KS Q  R   K+AFALDTG       G+  + +GD + LG TRLGR
Sbjct: 32  KASSITLTSFPYPMKSFQIRRPNRKIAFALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGR 91

Query: 109 LVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 163
           +  +G +QLL K+NSARKNFP KIFLLLLGFYTANALATILGQTGDWDVLVAG+V
Sbjct: 92  IAIAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIV 146

[Close]

BLAST of Cucsa.356420 vs. TAIR10
Match: AT3G56830.1 (AT3G56830.1 Protein of unknown function (DUF565))

HSP 1 Score: 69.3 bits (168), Expect = 2.4e-12
Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = 1


Query: 69  RHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRT----RLGRLVSSGARQLLEKLNSAR 128
           RH  ++++      + SS GGD  D    S+   +    RL + +     +LL K+   +
Sbjct: 48  RHQRRMSWTT----IKSSVGGDRFDPASGSSSNNSSRGLRLIKAIQVLRSKLLVKIQEIK 107

Query: 129 KNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGV 162
           K+ P K+F LL+GFY+A A +T +GQTGDWDVL AG+
Sbjct: 108 KDLPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGL 140

[Close]

BLAST of Cucsa.356420 vs. NCBI nr
Match: gi|449442657|ref|XP_004139097.1| (PREDICTED: ycf20-like protein [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 6.5e-84
Identity = 159/162 (98.15%), Postives = 160/162 (98.77%), Query Frame = 1


Query: 1   MEVGIFQMGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPF 60
           MEVGIFQMGAVILHSRLLTTANYSPQ SCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPF
Sbjct: 1   MEVGIFQMGAVILHSRLLTTANYSPQVSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPF 60

Query: 61  PQKSLQTSRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKL 120
           P+KSLQTSRH NKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKL
Sbjct: 61  PRKSLQTSRHVNKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKL 120

Query: 121 NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 163
           NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV
Sbjct: 121 NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 162

[Close]

BLAST of Cucsa.356420 vs. NCBI nr
Match: gi|659086607|ref|XP_008444023.1| (PREDICTED: ycf20-like protein [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 4.6e-45
Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 1


Query: 66  QTSRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARK 125
           QTSRH NK+AFALDTGGVSSSGGGDN+DDGDESNLGRTRLGRLVSSGARQLLEKLNSARK
Sbjct: 71  QTSRHVNKIAFALDTGGVSSSGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARK 130

Query: 126 NFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 163
           NFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV
Sbjct: 131 NFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 167

[Close]

BLAST of Cucsa.356420 vs. NCBI nr
Match: gi|590637811|ref|XP_007029223.1| (Uncharacterized protein TCM_025117 [Theobroma cacao])

HSP 1 Score: 181.8 bits (460), Expect = 9.6e-43
Identity = 99/157 (63.06%), Postives = 115/157 (73.25%), Query Frame = 1


Query: 7   QMGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPFPQKSLQ 66
           Q+G + L + L    N   + SC+T   C I  W  E    G++S   LKSA FP+KS  
Sbjct: 4   QVGRMYLQAGLSILENEVLESSCMTLATCAIQRWIIEPSICGQASKIGLKSALFPKKSFS 63

Query: 67  T-SRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARK 126
           T  RH  K+AFALDTGGVS  GG D+++  D SNLG TRLGR+VS+G+RQLLEKLNSARK
Sbjct: 64  TRKRHGWKIAFALDTGGVSGDGGEDSLNS-DSSNLGGTRLGRIVSAGSRQLLEKLNSARK 123

Query: 127 NFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 163
           NFP K+FLLLLGFYTANALATILGQTGDWDVLVAGVV
Sbjct: 124 NFPMKVFLLLLGFYTANALATILGQTGDWDVLVAGVV 159

[Close]

BLAST of Cucsa.356420 vs. NCBI nr
Match: gi|298205056|emb|CBI38352.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-42
Identity = 96/157 (61.15%), Postives = 116/157 (73.89%), Query Frame = 1


Query: 7   QMGAVILHSRLLTTANYSPQGSCLT-NMPCLIHYWGYEAIFNGRSSSFLLKSAPFPQKSL 66
           +MG ++L S L    + S   S +T    C I  W  E  F+G+ S   +KSAPFP+KS 
Sbjct: 20  RMGGIMLQSTLSVPESESSDCSYITFTTCCTIQNWNNEPSFSGQISKLGMKSAPFPRKSF 79

Query: 67  QTSRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARK 126
           QT RH  K AFALDTGG+  +GG +N++ G+  +LG+TRLGR+VS+G RQLL KLNSARK
Sbjct: 80  QTRRHGWKTAFALDTGGIPDNGGQENLN-GNGPDLGQTRLGRIVSAGGRQLLAKLNSARK 139

Query: 127 NFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 163
           NFP K+FLLLLGFYTANALATILGQTGDWDVLVAGVV
Sbjct: 140 NFPMKVFLLLLGFYTANALATILGQTGDWDVLVAGVV 175

[Close]

BLAST of Cucsa.356420 vs. NCBI nr
Match: gi|731440263|ref|XP_002267846.3| (PREDICTED: ycf20-like protein [Vitis vinifera])

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-42
Identity = 96/157 (61.15%), Postives = 116/157 (73.89%), Query Frame = 1


Query: 7   QMGAVILHSRLLTTANYSPQGSCLT-NMPCLIHYWGYEAIFNGRSSSFLLKSAPFPQKSL 66
           +MG ++L S L    + S   S +T    C I  W  E  F+G+ S   +KSAPFP+KS 
Sbjct: 4   RMGGIMLQSTLSVPESESSDCSYITFTTCCTIQNWNNEPSFSGQISKLGMKSAPFPRKSF 63

Query: 67  QTSRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARK 126
           QT RH  K AFALDTGG+  +GG +N++ G+  +LG+TRLGR+VS+G RQLL KLNSARK
Sbjct: 64  QTRRHGWKTAFALDTGGIPDNGGQENLN-GNGPDLGQTRLGRIVSAGGRQLLAKLNSARK 123

Query: 127 NFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVV 163
           NFP K+FLLLLGFYTANALATILGQTGDWDVLVAGVV
Sbjct: 124 NFPMKVFLLLLGFYTANALATILGQTGDWDVLVAGVV 159

The following BLAST results are available for this feature:

BLAST of Cucsa.356420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YC20L_ARATH	5.3e-33	63.48	Ycf20-like protein OS=Arabidopsis thaliana GN=At1g65420 PE=2 SV=2	[more]
YCF20_MESVI	1.1e-09	50.79	Uncharacterized protein ycf20 OS=Mesostigma viride GN=ycf20 PE=3 SV=1	[more]

BLAST of Cucsa.356420 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXR2_CUCSA	4.6e-84	98.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652280 PE=4 SV=1	[more]
A0A061EXE3_THECC	6.7e-43	63.06	Uncharacterized protein OS=Theobroma cacao GN=TCM_025117 PE=4 SV=1	[more]
D7U6I2_VITVI	1.1e-42	61.15	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0207g00110 PE=4 SV=...	[more]
A0A0D2QHN5_GOSRA	2.8e-41	62.82	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G088400 PE=4 SV=1	[more]
A0A0D2QQF2_GOSRA	2.8e-41	62.82	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G088400 PE=4 SV=1	[more]

BLAST of Cucsa.356420 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65420.1	3.0e-34	63.48	Protein of unknown function (DUF565)	[more]
AT3G56830.1	2.4e-12	38.14	Protein of unknown function (DUF565)	[more]

BLAST of Cucsa.356420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442657\|ref\|XP_004139097.1\|	6.5e-84	98.15	PREDICTED: ycf20-like protein [Cucumis sativus]	[more]
gi\|659086607\|ref\|XP_008444023.1\|	4.6e-45	96.91	PREDICTED: ycf20-like protein [Cucumis melo]	[more]
gi\|590637811\|ref\|XP_007029223.1\|	9.6e-43	63.06	Uncharacterized protein TCM_025117 [Theobroma cacao]	[more]
gi\|298205056\|emb\|CBI38352.3\|	1.6e-42	61.15	unnamed protein product [Vitis vinifera]	[more]
gi\|731440263\|ref\|XP_002267846.3\|	1.6e-42	61.15	PREDICTED: ycf20-like protein [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.356420.1	Cucsa.356420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33787	FAMILY NOT NAMED	coord: 7..162 score: 1.7
None	No IPR available	PANTHER	PTHR33787:SF4	YCF20-LIKE PROTEIN	coord: 7..162 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.356420	Cla009511	Watermelon (97103) v1	cgywmB638
Cucsa.356420	Csa1G652280	Cucumber (Chinese Long) v2	cgycuB500
Cucsa.356420	MELO3C010023	Melon (DHL92) v3.5.1	cgymeB574
Cucsa.356420	ClCG03G010340	Watermelon (Charleston Gray)	cgywcgB605
Cucsa.356420	CSPI01G32020	Wild cucumber (PI 183967)	cgycpiB528
Cucsa.356420	CmaCh11G009250	Cucurbita maxima (Rimu)	cgycmaB0970
Cucsa.356420	CmoCh11G009470	Cucurbita moschata (Rifu)	cgycmoB0973
Cucsa.356420	Lsi06G006760	Bottle gourd (USVL1VR-Ls)	cgylsiB573
Cucsa.356420	Cp4.1LG00g01450	Cucurbita pepo (Zucchini)	cgycpeB0927
Cucsa.356420	MELO3C010023.2	Melon (DHL92) v3.6.1	cgymedB575
Cucsa.356420	CsaV3_1G044300	Cucumber (Chinese Long) v3	cgycucB542
Cucsa.356420	Cla97C03G061050	Watermelon (97103) v2	cgywmbB608
Cucsa.356420	Bhi02G001108	Wax gourd	cgywgoB711
Cucsa.356420	Carg22715	Silver-seed gourd	carcgyB0613

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.356420	Cucurbita maxima (Rimu)	cgycmaB0969
Cucsa.356420	Cucurbita moschata (Rifu)	cgycmoB0972
Cucsa.356420	Watermelon (Charleston Gray)	cgywcgB607
Cucsa.356420	Cucurbita pepo (Zucchini)	cgycpeB0928
Cucsa.356420	Silver-seed gourd	carcgyB1085