Cla97C03G061050 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C03G061050
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	ycf20-like protein
Location	Cla97Chr03 : 17471827 .. 17473335 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAATGAGCATCTGCCAGATGGAAGCAGTGGTTTTGCAGTCCAGATTATTGACAATAGCGAATTATAGCTCCAAAGGGTCATGTCTTACTAATATGCCTTGCCTAATACATTACTGTGGCTATGAAGCTTTCTTTAATGGACACAATTCAAGCCTTTTCCTGAAATCTGCACCTTTTCCTCGAAAAAGGTAGACGTAGAATTTATAAACTTGTATACGTGTTGGTAGGAGGTCTGGCTATTCTTCTTGCGTATATTTCCATTTTAACTGTTGAATCCTTGGGTAATTAGATGAATGCTTATATTATATCGAGCACTAGAGAGGAATAGTAGGTGTTTTTAGAGAGATTGAGAGATTTTGGGAAGAGGCTTGAAGGGTTGCAAGGTTTAAAGTATATTTATGGGCGTATGCACTCTTTGTTTGTATGCACTCTTTACTTATAAGAAAATGAGAAATTAAGAATGGATACTTAATGTCCACTTTGATAATCATTTTGCTTTTATTTTATATTTTTTAAATTAAACCTGTAAGTTTCTTTATTTTGTGACTTACCTTTTAAAAACATTTTCAAAATCAATGTTAAATTTTTTATTTTAAAAAAATTGTTTCTAGACATTGTTTTTAACATCTTGTTTTGGAATTCAAATATGTGGTGAAAAATGTATCAAGAAAATTATGTGTTGTTAAGAGGCCTGGGCTATTCTTTTTGCGCATATTTCCATTTTACCATTGAATCCTTGGGTAATTAGATGAATGCATATGTTATATTGAGCACTAGAGAGGAATAGTAGGAATACGTTATATTGAGCACTAGAGATGCTAGGTTTAAAGCATCTTTATGGGCATATCCGCACTTTGTTTGTAATTACCAAGTTGGTCTCATTCATTTGGATTCGACTCCGTTCTTGTAGTTATTGTTGGGACTTTGACTCCTGTAGAATTGTTGTTTTGTATGTTCTTGTACTTCCATTTTTTTTCAATGAAAACTCGGTTATGTATGAAGAAAATTATGTATTAATGGTGTTATGAACATTCCCTTTGTGATGTTACTTCTTACAGTTTCCAGACGAGTAGACATCTCAAGAAATTAGCCTTTGCATTAGATACAGGTGGGGTATTTAGTAATGGTGGGGGAGACAACGTCGATGATGGTGATGAGTCCAATCTGGGTCGTACGCGATTAGGTAGGCTAGTTAGCTCAGGTGCCAGACAATTGCTAGAAAAGCTGAACTCAGCAAGAAAGAACTTCCCTACAAAGATATTTTTGCTTCTTTTGGGTTTCTATACAGCAAATGCACTTGCTACAATTCTTGGGCAGACGGGTGACTGGGATGTTTTGGTTGCTGGTGTGGTGGTTGCTGCCATCGAATGGATCGGTATTCTCATGTACAGGAAGCCGCCTCCTCTATTAACTAGGAGGTTGAAATCATTTATTGTGATGGTAAACTATTGGAAAGCTGGCGTGTGCTTAGGTCTCTTTGTTGATGCGTTCAAATTAGGGAGTTGA

mRNA sequence

ATGCAAATGAGCATCTGCCAGATGGAAGCAGTGGTTTTGCAGTCCAGATTATTGACAATAGCGAATTATAGCTCCAAAGGGTCATGTCTTACTAATATGCCTTGCCTAATACATTACTGTGGCTATGAAGCTTTCTTTAATGGACACAATTCAAGCCTTTTCCTGAAATCTGCACCTTTTCCTCGAAAAAGTTTCCAGACGAGTAGACATCTCAAGAAATTAGCCTTTGCATTAGATACAGGTGGGGTATTTAGTAATGGTGGGGGAGACAACGTCGATGATGGTGATGAGTCCAATCTGGGTCGTACGCGATTAGGTAGGCTAGTTAGCTCAGGTGCCAGACAATTGCTAGAAAAGCTGAACTCAGCAAGAAAGAACTTCCCTACAAAGATATTTTTGCTTCTTTTGGGTTTCTATACAGCAAATGCACTTGCTACAATTCTTGGGCAGACGGGTGACTGGGATGTTTTGGTTGCTGGTGTGGTGGTTGCTGCCATCGAATGGATCGGTATTCTCATGTACAGGAAGCCGCCTCCTCTATTAACTAGGAGGTTGAAATCATTTATTGTGATGGTAAACTATTGGAAAGCTGGCGTGTGCTTAGGTCTCTTTGTTGATGCGTTCAAATTAGGGAGTTGA

Coding sequence (CDS)

ATGCAAATGAGCATCTGCCAGATGGAAGCAGTGGTTTTGCAGTCCAGATTATTGACAATAGCGAATTATAGCTCCAAAGGGTCATGTCTTACTAATATGCCTTGCCTAATACATTACTGTGGCTATGAAGCTTTCTTTAATGGACACAATTCAAGCCTTTTCCTGAAATCTGCACCTTTTCCTCGAAAAAGTTTCCAGACGAGTAGACATCTCAAGAAATTAGCCTTTGCATTAGATACAGGTGGGGTATTTAGTAATGGTGGGGGAGACAACGTCGATGATGGTGATGAGTCCAATCTGGGTCGTACGCGATTAGGTAGGCTAGTTAGCTCAGGTGCCAGACAATTGCTAGAAAAGCTGAACTCAGCAAGAAAGAACTTCCCTACAAAGATATTTTTGCTTCTTTTGGGTTTCTATACAGCAAATGCACTTGCTACAATTCTTGGGCAGACGGGTGACTGGGATGTTTTGGTTGCTGGTGTGGTGGTTGCTGCCATCGAATGGATCGGTATTCTCATGTACAGGAAGCCGCCTCCTCTATTAACTAGGAGGTTGAAATCATTTATTGTGATGGTAAACTATTGGAAAGCTGGCGTGTGCTTAGGTCTCTTTGTTGATGCGTTCAAATTAGGGAGTTGA

Protein sequence

MQMSICQMEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPRKSFQTSRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS

Homology

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BLAST of Cla97C03G061050 vs. NCBI nr
Match: XP_004139097.1 (PREDICTED: ycf20-like protein [Cucumis sativus] >XP_011660206.1 PREDICTED: ycf20-like protein [Cucumis sativus] >XP_011660207.1 PREDICTED: ycf20-like protein [Cucumis sativus] >KGN66645.1 hypothetical protein Csa_1G652280 [Cucumis sativus])

HSP 1 Score: 372.9 bits (956), Expect = 7.4e-100
Identity = 189/212 (89.15%), Postives = 197/212 (92.92%), Query Frame = 0


Query: 1   MQMSICQMEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPF 60
           M++ I QM AV+L SRLLT ANYS + SCLTNMPCLIHY GYEA FNG +SS  LKSAPF
Sbjct: 1   MEVGIFQMGAVILHSRLLTTANYSPQVSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPF 60

Query: 61  PRKSFQTSRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKL 120
           PRKS QTSRH+ KLAFALDTGGV S+GGGDN+DDGDESNLGRTRLGRLVSSGARQLLEKL
Sbjct: 61  PRKSLQTSRHVNKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKL 120

Query: 121 NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPL 180
           NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPL
Sbjct: 121 NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPL 180

Query: 181 LTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           LTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS
Sbjct: 181 LTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 212

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BLAST of Cla97C03G061050 vs. NCBI nr
Match: XP_022924878.1 (ycf20-like protein [Cucurbita moschata] >XP_022924885.1 ycf20-like protein [Cucurbita moschata] >XP_022924895.1 ycf20-like protein [Cucurbita moschata] >XP_022924902.1 ycf20-like protein [Cucurbita moschata] >XP_022924910.1 ycf20-like protein [Cucurbita moschata] >XP_022924918.1 ycf20-like protein [Cucurbita moschata])

HSP 1 Score: 362.8 bits (930), Expect = 7.7e-97
Identity = 181/205 (88.29%), Postives = 194/205 (94.63%), Query Frame = 0


Query: 8   MEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPRKSFQT 67
           MEA+++QSRLLTIANY SKG CLT MPCLIH  GY A  NGHNS+L LKSAPFPRKSF+T
Sbjct: 1   MEAMIMQSRLLTIANYISKGLCLTYMPCLIHNMGYVAILNGHNSTLCLKSAPFPRKSFRT 60

Query: 68  SRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF 127
           SRHL++LAFALDTGGV SNGGGDN+DDG+ESNLGRTRLGRLVS+GARQLLEKLNSARKNF
Sbjct: 61  SRHLQQLAFALDTGGVSSNGGGDNLDDGNESNLGRTRLGRLVSAGARQLLEKLNSARKNF 120

Query: 128 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS 187
           PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMY+KPPPLLTRRLKS
Sbjct: 121 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYKKPPPLLTRRLKS 180

Query: 188 FIVMVNYWKAGVCLGLFVDAFKLGS 213
            IV++NYWKAGVCLGLFVDAFKLGS
Sbjct: 181 LIVLINYWKAGVCLGLFVDAFKLGS 205

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BLAST of Cla97C03G061050 vs. NCBI nr
Match: XP_023520636.1 (ycf20-like protein [Cucurbita pepo subsp. pepo] >XP_023520637.1 ycf20-like protein [Cucurbita pepo subsp. pepo] >XP_023520638.1 ycf20-like protein [Cucurbita pepo subsp. pepo] >XP_023520639.1 ycf20-like protein [Cucurbita pepo subsp. pepo] >XP_023520640.1 ycf20-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.3 bits (926), Expect = 2.2e-96
Identity = 180/205 (87.80%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 8   MEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPRKSFQT 67
           MEA+++QSRLLTIANY SKG CLT MPCLIH  GY A  NGHNS+L LKS PFPRKSF+T
Sbjct: 1   MEAMIMQSRLLTIANYISKGLCLTYMPCLIHNMGYVAILNGHNSTLCLKSVPFPRKSFRT 60

Query: 68  SRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF 127
           SRHL++LAFALDTGGV SNGGGDN+DDG+ESNLGRTRLGRLVS+GARQLLEKLNSARKNF
Sbjct: 61  SRHLQQLAFALDTGGVSSNGGGDNLDDGNESNLGRTRLGRLVSAGARQLLEKLNSARKNF 120

Query: 128 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS 187
           PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMY+KPPPLLTRRLKS
Sbjct: 121 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYKKPPPLLTRRLKS 180

Query: 188 FIVMVNYWKAGVCLGLFVDAFKLGS 213
            IV++NYWKAGVCLGLFVDAFKLGS
Sbjct: 181 LIVLINYWKAGVCLGLFVDAFKLGS 205

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BLAST of Cla97C03G061050 vs. NCBI nr
Match: XP_022973215.1 (ycf20-like protein [Cucurbita maxima] >XP_022973224.1 ycf20-like protein [Cucurbita maxima] >XP_022973228.1 ycf20-like protein [Cucurbita maxima] >XP_022973233.1 ycf20-like protein [Cucurbita maxima] >XP_022973241.1 ycf20-like protein [Cucurbita maxima] >XP_022973250.1 ycf20-like protein [Cucurbita maxima])

HSP 1 Score: 360.1 bits (923), Expect = 5.0e-96
Identity = 180/205 (87.80%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 8   MEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPRKSFQT 67
           MEA+++QSRLLTIANY SKG CLT MPCLIH   Y A  NGHNS+L LKSAPFPRKSF+T
Sbjct: 1   MEAMIMQSRLLTIANYISKGLCLTYMPCLIHNMDYVAILNGHNSTLCLKSAPFPRKSFRT 60

Query: 68  SRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF 127
           SRHL++LAFALDTGGV SNGGGDN+DDG+ESNLGRTRLGRLVS+GARQLLEKLNSARKNF
Sbjct: 61  SRHLQQLAFALDTGGVSSNGGGDNLDDGNESNLGRTRLGRLVSAGARQLLEKLNSARKNF 120

Query: 128 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS 187
           PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMY+KPPPLLTRRLKS
Sbjct: 121 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYKKPPPLLTRRLKS 180

Query: 188 FIVMVNYWKAGVCLGLFVDAFKLGS 213
            IV++NYWKAGVCLGLFVDAFKLGS
Sbjct: 181 LIVLINYWKAGVCLGLFVDAFKLGS 205

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BLAST of Cla97C03G061050 vs. NCBI nr
Match: XP_022149955.1 (ycf20-like protein [Momordica charantia])

HSP 1 Score: 334.0 bits (855), Expect = 3.8e-88
Identity = 174/212 (82.08%), Postives = 188/212 (88.68%), Query Frame = 0


Query: 3   MSICQMEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPR 62
           M+ C M A++LQSRLL I +YSS+GSCLTN+ CL++Y GY A FN  NS+  LKSAPFPR
Sbjct: 1   MTTCHMGAMILQSRLLKIESYSSRGSCLTNISCLVYYWGYAAVFNAQNSTRCLKSAPFPR 60

Query: 63  KSFQTSRHL--KKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKL 122
           +SFQTSRHL  +KLAFALDT G+  NGG DN  DGDESNLGRTRLGRLVSS ARQLLEKL
Sbjct: 61  RSFQTSRHLRKRKLAFALDTSGLPRNGGEDN-PDGDESNLGRTRLGRLVSSAARQLLEKL 120

Query: 123 NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPL 182
           NSARKNFP KIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIE IG+LMYRKPPPL
Sbjct: 121 NSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGVLMYRKPPPL 180

Query: 183 LTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           LTRRLKSFIVM+NYWKAGVCLGLFVDAFKLGS
Sbjct: 181 LTRRLKSFIVMINYWKAGVCLGLFVDAFKLGS 211

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BLAST of Cla97C03G061050 vs. TrEMBL
Match: tr|A0A0A0LXR2|A0A0A0LXR2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G652280 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 4.9e-100
Identity = 189/212 (89.15%), Postives = 197/212 (92.92%), Query Frame = 0


Query: 1   MQMSICQMEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPF 60
           M++ I QM AV+L SRLLT ANYS + SCLTNMPCLIHY GYEA FNG +SS  LKSAPF
Sbjct: 1   MEVGIFQMGAVILHSRLLTTANYSPQVSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPF 60

Query: 61  PRKSFQTSRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKL 120
           PRKS QTSRH+ KLAFALDTGGV S+GGGDN+DDGDESNLGRTRLGRLVSSGARQLLEKL
Sbjct: 61  PRKSLQTSRHVNKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKL 120

Query: 121 NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPL 180
           NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPL
Sbjct: 121 NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPL 180

Query: 181 LTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           LTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS
Sbjct: 181 LTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 212

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BLAST of Cla97C03G061050 vs. TrEMBL
Match: tr|A0A1S3B8Z3|A0A1S3B8Z3_CUCME (ycf20-like protein OS=Cucumis melo OX=3656 GN=LOC103487471 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.3e-73
Identity = 144/151 (95.36%), Postives = 147/151 (97.35%), Query Frame = 0


Query: 62  RKSFQTSRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLN 121
           R  FQTSRH+ K+AFALDTGGV S+GGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLN
Sbjct: 67  RCGFQTSRHVNKIAFALDTGGVSSSGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLN 126

Query: 122 SARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLL 181
           SARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLL
Sbjct: 127 SARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLL 186

Query: 182 TRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           TRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS
Sbjct: 187 TRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 217

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BLAST of Cla97C03G061050 vs. TrEMBL
Match: tr|A0A061EXE3|A0A061EXE3_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_025117 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 7.9e-66
Identity = 142/208 (68.27%), Postives = 162/208 (77.88%), Query Frame = 0


Query: 6   CQMEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPRKSF 65
           CQ+  + LQ+ L  + N   + SC+T   C I     E    G  S + LKSA FP+KSF
Sbjct: 3   CQVGRMYLQAGLSILENEVLESSCMTLATCAIQRWIIEPSICGQASKIGLKSALFPKKSF 62

Query: 66  QT-SRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSAR 125
            T  RH  K+AFALDTGGV  +GG D++ + D SNLG TRLGR+VS+G+RQLLEKLNSAR
Sbjct: 63  STRKRHGWKIAFALDTGGVSGDGGEDSL-NSDSSNLGGTRLGRIVSAGSRQLLEKLNSAR 122

Query: 126 KNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRR 185
           KNFP K+FLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIE IG+LMYRKPP L T R
Sbjct: 123 KNFPMKVFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYRKPPSLKTGR 182

Query: 186 LKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           L+SF+VMVNYWKAGVCLGLFVDAFKLGS
Sbjct: 183 LQSFVVMVNYWKAGVCLGLFVDAFKLGS 209

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BLAST of Cla97C03G061050 vs. TrEMBL
Match: tr|A0A1Q3C7M3|A0A1Q3C7M3_CEPFO (DUF565 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_19649 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.3e-64
Identity = 138/206 (66.99%), Postives = 158/206 (76.70%), Query Frame = 0


Query: 7   QMEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPRKSFQ 66
           +MEA+VLQ  L  + N  S   C+T   C I     E  F G  S++ +KS P P+ S+Q
Sbjct: 8   RMEAMVLQPGLSLMENKVSGRLCMTLATCAIQNWHSEPSFGGQISNIRIKSMPCPKTSYQ 67

Query: 67  TSRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKN 126
             RH  +LAFALDTGG   NGG +++ + D  +LG TRLGR+VS+G RQLLEKLNSARKN
Sbjct: 68  RRRHHLQLAFALDTGGNLVNGGQESL-NSDSPDLGGTRLGRIVSAGGRQLLEKLNSARKN 127

Query: 127 FPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLK 186
           FP KIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIE IG+LMYRKPP L T RL+
Sbjct: 128 FPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYRKPPSLSTGRLQ 187

Query: 187 SFIVMVNYWKAGVCLGLFVDAFKLGS 213
           SF+ MVNYWKAGVCLGLFVDAFKLGS
Sbjct: 188 SFVAMVNYWKAGVCLGLFVDAFKLGS 212

[Close]

BLAST of Cla97C03G061050 vs. TrEMBL
Match: tr|A0A067JSH3|A0A067JSH3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_18069 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 3.7e-63
Identity = 133/207 (64.25%), Postives = 158/207 (76.33%), Query Frame = 0


Query: 6   CQMEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPRKSF 65
           CQ+E  +L+S LL +    SK SC+ +  C +        F+G  S + +   PF ++ F
Sbjct: 3   CQLEFRMLRSGLLAMETEVSKRSCINHATCAMQNWSVAPNFSGQTSKIGVNFPPFLKQRF 62

Query: 66  QTSRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARK 125
           Q  R   ++ FALDTGG+  NGG +N+ DGD S LG TRLGR+VS+G+RQLL+KLNSARK
Sbjct: 63  QLRRCDWRIPFALDTGGIAGNGGPENL-DGDSSGLGGTRLGRIVSAGSRQLLQKLNSARK 122

Query: 126 NFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRL 185
           NFP KIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIE IG+LMY+KP  L T RL
Sbjct: 123 NFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYKKPTSLSTGRL 182

Query: 186 KSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           +SF+VMVNYWKAGVCLGLFVDAFKLGS
Sbjct: 183 QSFVVMVNYWKAGVCLGLFVDAFKLGS 208

[Close]

BLAST of Cla97C03G061050 vs. Swiss-Prot
Match: sp|O80813|YC20L_ARATH (Ycf20-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g65420 PE=2 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 2.7e-53
Identity = 109/164 (66.46%), Postives = 131/164 (79.88%), Query Frame = 0


Query: 51  SSLFLKSAPFPRKSFQTSRHLKKLAFALDTGGVFSNGGGDNVD-DGDESNLGRTRLGRLV 110
           SS+ L S P+P KSFQ  R  +K+AFALDTG       G+  + +GD + LG TRLGR+ 
Sbjct: 34  SSITLTSFPYPMKSFQIRRPNRKIAFALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGRIA 93

Query: 111 SSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWI 170
            +G +QLL K+NSARKNFP KIFLLLLGFYTANALATILGQTGDWDVLVAG+VVAAIE I
Sbjct: 94  IAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGI 153

Query: 171 GILMYRKP-PPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           G+LMY+KP   + + +L+SF+V +N+WKAGVCLGLFVDAFKLGS
Sbjct: 154 GMLMYKKPSSSMFSGKLQSFVVFMNFWKAGVCLGLFVDAFKLGS 197

[Close]

BLAST of Cla97C03G061050 vs. Swiss-Prot
Match: sp|Q9MUL5|YCF20_MESVI (Uncharacterized protein ycf20 OS=Mesostigma viride OX=41882 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 57/118 (48.31%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 100 LGRTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVA 159
           +  TRL    ++  + L  K+ +   NFP KI LLLLGF+ A  LAT+ GQTGDWDVLVA
Sbjct: 1   MSNTRLTLFFTNIFQLLDSKIQNYSINFPIKILLLLLGFFIATVLATVFGQTGDWDVLVA 60

Query: 160 GVVVAAIEWIGILMYRKPPPLLTRRLK---SF--IVMVNYWKAGVCLGLFVDAFKLGS 213
           G++VA IE +G  MY K    ++++     SF  ++ +NY K G+  GLFVDAFKLGS
Sbjct: 61  GILVAMIEILGNKMYSK--KYISKKQVFDISFLSLIGINYIKIGLIFGLFVDAFKLGS 116

[Close]

BLAST of Cla97C03G061050 vs. Swiss-Prot
Match: sp|Q1XDS2|YCF20_PYRYE (Uncharacterized protein ycf20 OS=Pyropia yezoensis OX=2788 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.1e-12
Identity = 43/111 (38.74%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 102 RTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGV 161
           +TRL    +   + L  KL  +     T +  LLLGF+ +  L+TI GQTGDW ++ A +
Sbjct: 3   KTRLSTFFAYLIKNLNNKLYYSLSELTTGLISLLLGFFISTGLSTIPGQTGDWGIIAASL 62

Query: 162 VVAAIEWIGILMYRKPPPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           +VAA E    ++Y        ++L   I + N +K G+  GLFVDAFKLGS
Sbjct: 63  IVAATELTSKIVYSS-----HKQLNIKINLFNNFKIGITYGLFVDAFKLGS 108

[Close]

BLAST of Cla97C03G061050 vs. Swiss-Prot
Match: sp|P51214|YCF20_PORPU (Uncharacterized protein ycf20 OS=Porphyra purpurea OX=2787 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.0e-12
Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = 0


Query: 102 RTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGV 161
           RT+L    S   + L  +L  +       +  LLLGF+ +  L+TI GQTGDW ++ A +
Sbjct: 3   RTKLSIFFSYFVQNLSSRLYYSLNELTAGLISLLLGFFISTGLSTIPGQTGDWGIIAASL 62

Query: 162 VVAAIEWIGILMYRKPPPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           +VAAIE +  ++Y        R     I ++N  K G+  GLFVDAFKLGS
Sbjct: 63  IVAAIELVSKIVYSNKKKYGVR-----INLLNNLKIGITYGLFVDAFKLGS 108

[Close]

BLAST of Cla97C03G061050 vs. Swiss-Prot
Match: sp|P72983|YC20L_SYNY3 (Ycf20-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll1509 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07
Identity = 34/111 (30.63%), Postives = 55/111 (49.55%), Query Frame = 0


Query: 102 RTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGV 161
           RTRL  +V    +QL +   +  +     +   L GF+   A+AT  GQ   WDV+ A  
Sbjct: 3   RTRLNTIVEVRGQQLSQFFRNPWRRISLSLLSFLFGFFVGTAVATTAGQNSQWDVVCAAF 62

Query: 162 VVAAIEWIGILMYRKPPPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           ++   E +    YR+   +   + +    ++N +K GV   LF++AFKLGS
Sbjct: 63  ILLFCELVNRWFYRRGVKMGDLQAE----VLNIFKMGVSYSLFLEAFKLGS 109

[Close]

BLAST of Cla97C03G061050 vs. TAIR10
Match: AT1G65420.1 (Protein of unknown function (DUF565))

HSP 1 Score: 209.9 bits (533), Expect = 1.5e-54
Identity = 109/164 (66.46%), Postives = 131/164 (79.88%), Query Frame = 0


Query: 51  SSLFLKSAPFPRKSFQTSRHLKKLAFALDTGGVFSNGGGDNVD-DGDESNLGRTRLGRLV 110
           SS+ L S P+P KSFQ  R  +K+AFALDTG       G+  + +GD + LG TRLGR+ 
Sbjct: 34  SSITLTSFPYPMKSFQIRRPNRKIAFALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGRIA 93

Query: 111 SSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWI 170
            +G +QLL K+NSARKNFP KIFLLLLGFYTANALATILGQTGDWDVLVAG+VVAAIE I
Sbjct: 94  IAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGI 153

Query: 171 GILMYRKP-PPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           G+LMY+KP   + + +L+SF+V +N+WKAGVCLGLFVDAFKLGS
Sbjct: 154 GMLMYKKPSSSMFSGKLQSFVVFMNFWKAGVCLGLFVDAFKLGS 197

[Close]

BLAST of Cla97C03G061050 vs. TAIR10
Match: AT3G56830.1 (Protein of unknown function (DUF565))

HSP 1 Score: 112.5 bits (280), Expect = 3.3e-25
Identity = 61/145 (42.07%), Postives = 90/145 (62.07%), Query Frame = 0


Query: 69  RHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRT----RLGRLVSSGARQLLEKLNSAR 128
           RH +++++      + S+ GGD  D    S+   +    RL + +     +LL K+   +
Sbjct: 48  RHQRRMSWTT----IKSSVGGDRFDPASGSSSNNSSRGLRLIKAIQVLRSKLLVKIQEIK 107

Query: 129 KNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRR 188
           K+ P K+F LL+GFY+A A +T +GQTGDWDVL AG+ V  +E IG LMYR   PL+  +
Sbjct: 108 KDLPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYRASIPLI-NK 167

Query: 189 LKSFIVMVNYWKAGVCLGLFVDAFK 210
           ++S I M NYWK G+ LGLF+D+FK
Sbjct: 168 MRSTITMFNYWKTGLALGLFLDSFK 187

[Close]

BLAST of Cla97C03G061050 vs. TAIR10
Match: AT5G43050.1 (Protein of unknown function (DUF565))

HSP 1 Score: 42.0 bits (97), Expect = 5.5e-04
Identity = 29/80 (36.25%), Postives = 41/80 (51.25%), Query Frame = 0


Query: 134 LLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKSF-IVMV 193
           LL GFY A  ++   G  G  DV+ A + V   E++    Y       +R   +F I ++
Sbjct: 86  LLGGFYVAQTISLSFGALGVNDVIAAVLCVLLTEYVTRFYY-------SRTTVTFPIALL 145

Query: 194 NYWKAGVCLGLFVDAFKLGS 213
           N +K G   GLF+DAFKL S
Sbjct: 146 NNFKMGFTYGLFIDAFKLAS 158

The following BLAST results are available for this feature:

BLAST of Cla97C03G061050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139097.1	7.4e-100	89.15	PREDICTED: ycf20-like protein [Cucumis sativus] >XP_011660206.1 PREDICTED: ycf20...	[more]
XP_022924878.1	7.7e-97	88.29	ycf20-like protein [Cucurbita moschata] >XP_022924885.1 ycf20-like protein [Cucu...	[more]
XP_023520636.1	2.2e-96	87.80	ycf20-like protein [Cucurbita pepo subsp. pepo] >XP_023520637.1 ycf20-like prote...	[more]
XP_022973215.1	5.0e-96	87.80	ycf20-like protein [Cucurbita maxima] >XP_022973224.1 ycf20-like protein [Cucurb...	[more]
XP_022149955.1	3.8e-88	82.08	ycf20-like protein [Momordica charantia]	[more]

BLAST of Cla97C03G061050 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LXR2\|A0A0A0LXR2_CUCSA	4.9e-100	89.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G652280 PE=4 SV=1	[more]
tr\|A0A1S3B8Z3\|A0A1S3B8Z3_CUCME	1.3e-73	95.36	ycf20-like protein OS=Cucumis melo OX=3656 GN=LOC103487471 PE=4 SV=1	[more]
tr\|A0A061EXE3\|A0A061EXE3_THECC	7.9e-66	68.27	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_025117 PE=4 SV=1	[more]
tr\|A0A1Q3C7M3\|A0A1Q3C7M3_CEPFO	3.3e-64	66.99	DUF565 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_1...	[more]
tr\|A0A067JSH3\|A0A067JSH3_JATCU	3.7e-63	64.25	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_18069 PE=4 SV=1	[more]

BLAST of Cla97C03G061050 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O80813\|YC20L_ARATH	2.7e-53	66.46	Ycf20-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g65420 PE=2 SV=2	[more]
sp\|Q9MUL5\|YCF20_MESVI	1.3e-18	48.31	Uncharacterized protein ycf20 OS=Mesostigma viride OX=41882 GN=ycf20 PE=3 SV=1	[more]
sp\|Q1XDS2\|YCF20_PYRYE	3.1e-12	38.74	Uncharacterized protein ycf20 OS=Pyropia yezoensis OX=2788 GN=ycf20 PE=3 SV=1	[more]
sp\|P51214\|YCF20_PORPU	4.0e-12	38.74	Uncharacterized protein ycf20 OS=Porphyra purpurea OX=2787 GN=ycf20 PE=3 SV=1	[more]
sp\|P72983\|YC20L_SYNY3	1.0e-07	30.63	Ycf20-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN...	[more]

BLAST of Cla97C03G061050 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65420.1	1.5e-54	66.46	Protein of unknown function (DUF565)	[more]
AT3G56830.1	3.3e-25	42.07	Protein of unknown function (DUF565)	[more]
AT5G43050.1	5.5e-04	36.25	Protein of unknown function (DUF565)	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007572	Uncharacterised_Ycf20

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010196	nonphotochemical quenching
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C03G061050.1	Cla97C03G061050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007572	Uncharacterised protein family Ycf20	PFAM	PF04483	DUF565	coord: 150..212 e-value: 1.5E-21 score: 76.6
IPR007572	Uncharacterised protein family Ycf20	PANTHER	PTHR33787	FAMILY NOT NAMED	coord: 6..212
None	No IPR available	PANTHER	PTHR33787:SF4	YCF20-LIKE PROTEIN	coord: 6..212

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C03G061050	Cla009511	Watermelon (97103) v1	wmwmbB126
Cla97C03G061050	Csa1G652280	Cucumber (Chinese Long) v2	cuwmbB035
Cla97C03G061050	MELO3C010023	Melon (DHL92) v3.5.1	mewmbB244
Cla97C03G061050	ClCG03G010340	Watermelon (Charleston Gray)	wcgwmbB186
Cla97C03G061050	CSPI01G32020	Wild cucumber (PI 183967)	cpiwmbB035
Cla97C03G061050	Cucsa.356420	Cucumber (Gy14) v1	cgywmbB608
Cla97C03G061050	CmaCh11G009250	Cucurbita maxima (Rimu)	cmawmbB111
Cla97C03G061050	CmoCh11G009470	Cucurbita moschata (Rifu)	cmowmbB097
Cla97C03G061050	Lsi06G006760	Bottle gourd (USVL1VR-Ls)	lsiwmbB362
Cla97C03G061050	CsGy1G031030	Cucumber (Gy14) v2	cgybwmbB035
Cla97C03G061050	MELO3C010023.2	Melon (DHL92) v3.6.1	medwmbB229
Cla97C03G061050	Carg22715	Silver-seed gourd	carwmbB0560
Cla97C03G061050	CsaV3_1G044300	Cucumber (Chinese Long) v3	cucwmbB033
Cla97C03G061050	Bhi02G001108	Wax gourd	wgowmbB639

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C03G061050	Silver-seed gourd	carwmbB1021
Cla97C03G061050	Cucurbita maxima (Rimu)	cmawmbB065
Cla97C03G061050	Cucurbita moschata (Rifu)	cmowmbB052