CsGy1G031030 (gene) Cucumber (Gy14) v2

NameCsGy1G031030
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionycf20-like protein isoform X1
LocationChr1 : 29697997 .. 29700872 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTAGTAATTCACAGCAACTATATCGTTTAAAATAATTTTCTTTAAAAAAAGAAAGAAAAGGATAAAGCTACCCCCGTCAATCGCCACCGCCTCACGTCTACCTCTCTCTCACAGCGATCTGCAGAAATCTCCAACGGACAGCCTCTCCGTCGTCGTTGGCCGCCGTTCGACCACTCCCCACCGACGCCCGCGTTGGTCCGATAAGTTGTGCGCCGCCTAACGATCTTGCCATCAGCCCTCTCGGGTCTGCTGTTCGCCGCCGGTCATTGCTACGCCTCTTCTTGGCGTCCAGTGTCTCCACCTTCGTTCTTGTGGTCTTCTCCGGAATTTCGTTTGGGTGAGTTTTTGTGTTAGTTGGAAAGATGTTTTTGACGCATCTAGAATGCCTGTTAACTGATGGTCTCAGTATATTGACACCCTTTGTGTTTCGGTTTTAGATTGAATATCAGAATTGTTGTTAGTTACTGTCCTGCAAGTTCGGGACCGGTTTCGGCAAGATGTGGATAAGTATTTGTCTTTGAGGTTTGAGGGCCGTTTGGAATGTTAAGGATGCTTTAAATTAATTTTCTAATTCTTGGCGGTGGTCTATGTTCGGGTTGGGTTACTTGATTGAAGTTTCGAAGTGGTTTTGGATCAAACCACGTGTTGGGTAAGTCGTGCAGTATGGAGATTTTGTTATAAGTTAAATGTATGTTTAGAATGAAGTCTTATACAGTTTGGAATAAGTATGCAAGGTGTTATTCGGATGTTAATAAATCACACTCGTCCATTAATTTTTAGATTTGTGGAAAGATTTGTAGATTGAACCAATGTTGATTTTAATTTGCAGTATAGAAGCTGTTTCTTTTGATTGTAGATTGTCTAAGAAATGGCAATAATGTGAGTATGGAAGTGGGCATCTTCCAGATGGGTGCAGTAATTTTGCACTCCAGATTATTGACAACAGCGAATTATAGCCCTCAAGGATCATGTCTTACCAATATGCCCTGCCTAATCCACTACTGGGGCTATGAGGCTATCTTTAATGGACGCAGTTCAAGCTTTCTCCTGAAATCTGCACCATTTCCTCAAAAAAGGTACAAGTGGAGTTTTTAAACTTGTATCACGCCTTGTTAAGAGGCCTGCGCTATTTTTCTTGCGTATATTTCCATTTTAATTGTTGAATCCTTGGGTAATTAGATGACTGCTTATATTATATTGAGAACTAGAGAGGAATATTAGTTCTTAGAGAGATTGGAAGATCTTGGGTGGAGGTCAGAGCCGTCGCTAGGTTTAAAGCATCTGTACGGGTGTATCCACTCTTTGTTTGTAATTACCAGCTTGGTTTCATTCTTTTGGATTGGAGTCGGCTCTCCTAATTTTTGTTAGGATCAGTGTTTCAAAAGCCCGCTTGGAGGCGCACGCCTAGGCTCAATGCTCAAGGGTCAAGTTTAGCGCCTTGGATTGAAAAAGCAAGGCTCATGAAATAAGGCACGCCTTAGGTGCACGAAATAAGGCACGCCTTAGGTGCACGAAATAAGGCACGCCTTAGGTGCACGAAATAAGGCACGCCTTAGGTGCACGCCTTTTGTGATGTCCCATGGCTCACAGCCCTGGCCGTTGGGGCTTTTTCATTATTTCTAATAAAAGTAATAATTAGGGTTTTTTCCTTCTTTATTAACTAAAATGATTAAATTTAGTAAGCCCAAATGCAATTTCTTGTGTTTATTGGGTTTCCTTTTCCTATATGTCCACTTTAACCATGCTTTCTCATGAATGTAGTATGTTTATATATAATGCGCCTCATTAAAGAACTATTGCGTTGAGCCCTAAAAACTATTGCGCTAAGCCCTAAAGAGTATTGCGTTTTCTTGTGGGTTGAGGATTAAGAAACACTGGTTGGTTCTTTGACTCCTTATGTCATGTGAAATTGTTCTTTTGTATCTTCTTGTGCATTCTTTCATTTTTCTCAACAAAAGCTCGGTTTCGTATGAAAGGAAGTTTATATATTAATGCTGTTATGAACCTGTTTGTGATGTTACTTGTTACAGTCTCCAGACGAGTAGACATGCCAATAAATTAGCCTTTGCATTAGATACAGGTGGGGTATCTAGTAGTGGTGGGGGAGACAACATCGACGATGGTGATGAGTCCAATCTGGGTCGTACTCGATTAGGCAGGCTAGTTAGTTCAGGTGCCAGACAGTTGCTGGAAAAACTGAACTCAGCGAGAAAAAACTTTCCTACAAAGATATTTTTGCTTCTTTTGGGTTTCTACACAGCAAATGCACTTGCTACAATTCTTGGACAGACGGGTGATTGGGATGTTTTGGTTGCTGGTGTGGTGGTTGCTGCTATAGAATGGATTGGTATACTCATGTACAGGAAGCCTCCACCTCTATTAACTAGGAGGCTGAAATCATTTATTGTAATGGTTAACTATTGGAAAGCTGGTGTGTGCTTGGGCCTCTTTGTCGATGCGTTCAAATTAGGGAGTTGAAAGATGTTGCTTCCTCAATTGAAAAAGAAAAAACATAGGTAATTCTTTTTACCTTAGAGGAAAATCATTTCTGCGCAAGGCAGACATTTTTGTTTCATTTGTGTTTCTTTTGTCACTGTGTAATCTTATAGATATCTTTTGTTCTAGGATGTTACTGTACTATAATCCTTTGCAATTTTCAATCTTTTAAAAAACAATTTTACTAATTAATGCATGGACTGTGTAGAATTTAGAGTGGGAAAACAGAAAATAATTAGACAGGTTATGTGACTGCCAGCTTTTCTATATTTTCATCTTCTCCCAAGTTGATTAGAAGAAGAATCTGTCTCGGTTGTGAAATAAGTTGTCGATATGTGAAAAGAATCCATCACATTCTATTCTGTTTGAGAAATGCTG

mRNA sequence

TTTTAGTAATTCACAGCAACTATATCGTTTAAAATAATTTTCTTTAAAAAAAGAAAGAAAAGGATAAAGCTACCCCCGTCAATCGCCACCGCCTCACGTCTACCTCTCTCTCACAGCGATCTGCAGAAATCTCCAACGGACAGCCTCTCCGTCGTCGTTGGCCGCCGTTCGACCACTCCCCACCGACGCCCGCGTTGGTCCGATAAGTTGTGCGCCGCCTAACGATCTTGCCATCAGCCCTCTCGGGTCTGCTGTTCGCCGCCGGTCATTGCTACGCCTCTTCTTGGCGTCCAGTGTCTCCACCTTCGTTCTTGTGGTCTTCTCCGGAATTTCGTTTGGATTGAATATCAGAATTGTTGTTAGTTACTGTCCTGCAAGTTCGGGACCGGTTTCGGCAAGATGTGGATAAGTATTTGTCTTTGAGGTTTGAGGGCCGTTTGGAATGTTAAGGATGCTTTAAATTAATTTTCTAATTCTTGGCGGTGGTCTATGTTCGGGTTGGGTTACTTGATTGAAGTTTCGAAGTGGTTTTGGATCAAACCACGTGTTGGTATAGAAGCTGTTTCTTTTGATTGTAGATTGTCTAAGAAATGGCAATAATGTGAGTATGGAAGTGGGCATCTTCCAGATGGGTGCAGTAATTTTGCACTCCAGATTATTGACAACAGCGAATTATAGCCCTCAAGGATCATGTCTTACCAATATGCCCTGCCTAATCCACTACTGGGGCTATGAGGCTATCTTTAATGGACGCAGTTCAAGCTTTCTCCTGAAATCTGCACCATTTCCTCAAAAAAGTCTCCAGACGAGTAGACATGCCAATAAATTAGCCTTTGCATTAGATACAGGTGGGGTATCTAGTAGTGGTGGGGGAGACAACATCGACGATGGTGATGAGTCCAATCTGGGTCGTACTCGATTAGGCAGGCTAGTTAGTTCAGGTGCCAGACAGTTGCTGGAAAAACTGAACTCAGCGAGAAAAAACTTTCCTACAAAGATATTTTTGCTTCTTTTGGGTTTCTACACAGCAAATGCACTTGCTACAATTCTTGGACAGACGGGTGATTGGGATGTTTTGGTTGCTGGTGTGGTGGTTGCTGCTATAGAATGGATTGGTATACTCATGTACAGGAAGCCTCCACCTCTATTAACTAGGAGGCTGAAATCATTTATTGTAATGGTTAACTATTGGAAAGCTGGTGTGTGCTTGGGCCTCTTTGTCGATGCGTTCAAATTAGGGAGTTGAAAGATGTTGCTTCCTCAATTGAAAAAGAAAAAACATAGGTAATTCTTTTTACCTTAGAGGAAAATCATTTCTGCGCAAGGCAGACATTTTTGTTTCATTTGTGTTTCTTTTGTCACTGTGTAATCTTATAGATATCTTTTGTTCTAGGATGTTACTGTACTATAATCCTTTGCAATTTTCAATCTTTTAAAAAACAATTTTACTAATTAATGCATGGACTGTGTAGAATTTAGAGTGGGAAAACAGAAAATAATTAGACAGGTTATGTGACTGCCAGCTTTTCTATATTTTCATCTTCTCCCAAGTTGATTAGAAGAAGAATCTGTCTCGGTTGTGAAATAAGTTGTCGATATGTGAAAAGAATCCATCACATTCTATTCTGTTTGAGAAATGCTG

Coding sequence (CDS)

ATGGAAGTGGGCATCTTCCAGATGGGTGCAGTAATTTTGCACTCCAGATTATTGACAACAGCGAATTATAGCCCTCAAGGATCATGTCTTACCAATATGCCCTGCCTAATCCACTACTGGGGCTATGAGGCTATCTTTAATGGACGCAGTTCAAGCTTTCTCCTGAAATCTGCACCATTTCCTCAAAAAAGTCTCCAGACGAGTAGACATGCCAATAAATTAGCCTTTGCATTAGATACAGGTGGGGTATCTAGTAGTGGTGGGGGAGACAACATCGACGATGGTGATGAGTCCAATCTGGGTCGTACTCGATTAGGCAGGCTAGTTAGTTCAGGTGCCAGACAGTTGCTGGAAAAACTGAACTCAGCGAGAAAAAACTTTCCTACAAAGATATTTTTGCTTCTTTTGGGTTTCTACACAGCAAATGCACTTGCTACAATTCTTGGACAGACGGGTGATTGGGATGTTTTGGTTGCTGGTGTGGTGGTTGCTGCTATAGAATGGATTGGTATACTCATGTACAGGAAGCCTCCACCTCTATTAACTAGGAGGCTGAAATCATTTATTGTAATGGTTAACTATTGGAAAGCTGGTGTGTGCTTGGGCCTCTTTGTCGATGCGTTCAAATTAGGGAGTTGA

Protein sequence

MEVGIFQMGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPFPQKSLQTSRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS
BLAST of CsGy1G031030 vs. NCBI nr
Match: XP_004139097.1 (PREDICTED: ycf20-like protein [Cucumis sativus] >XP_011660206.1 PREDICTED: ycf20-like protein [Cucumis sativus] >XP_011660207.1 PREDICTED: ycf20-like protein [Cucumis sativus] >KGN66645.1 hypothetical protein Csa_1G652280 [Cucumis sativus])

HSP 1 Score: 415.2 bits (1066), Expect = 1.3e-112
Identity = 209/212 (98.58%), Postives = 210/212 (99.06%), Query Frame = 0

Query: 1   MEVGIFQMGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPF 60
           MEVGIFQMGAVILHSRLLTTANYSPQ SCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPF
Sbjct: 1   MEVGIFQMGAVILHSRLLTTANYSPQVSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPF 60

Query: 61  PQKSLQTSRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKL 120
           P+KSLQTSRH NKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKL
Sbjct: 61  PRKSLQTSRHVNKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKL 120

Query: 121 NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPL 180
           NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPL
Sbjct: 121 NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPL 180

Query: 181 LTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           LTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS
Sbjct: 181 LTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 212

BLAST of CsGy1G031030 vs. NCBI nr
Match: XP_022924878.1 (ycf20-like protein [Cucurbita moschata] >XP_022924885.1 ycf20-like protein [Cucurbita moschata] >XP_022924895.1 ycf20-like protein [Cucurbita moschata] >XP_022924902.1 ycf20-like protein [Cucurbita moschata] >XP_022924910.1 ycf20-like protein [Cucurbita moschata] >XP_022924918.1 ycf20-like protein [Cucurbita moschata])

HSP 1 Score: 343.6 bits (880), Expect = 4.8e-91
Identity = 172/205 (83.90%), Postives = 187/205 (91.22%), Query Frame = 0

Query: 8   MGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPFPQKSLQT 67
           M A+I+ SRLLT ANY  +G CLT MPCLIH  GY AI NG +S+  LKSAPFP+KS +T
Sbjct: 1   MEAMIMQSRLLTIANYISKGLCLTYMPCLIHNMGYVAILNGHNSTLCLKSAPFPRKSFRT 60

Query: 68  SRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF 127
           SRH  +LAFALDTGGVSS+GGGDN+DDG+ESNLGRTRLGRLVS+GARQLLEKLNSARKNF
Sbjct: 61  SRHLQQLAFALDTGGVSSNGGGDNLDDGNESNLGRTRLGRLVSAGARQLLEKLNSARKNF 120

Query: 128 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS 187
           PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMY+KPPPLLTRRLKS
Sbjct: 121 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYKKPPPLLTRRLKS 180

Query: 188 FIVMVNYWKAGVCLGLFVDAFKLGS 213
            IV++NYWKAGVCLGLFVDAFKLGS
Sbjct: 181 LIVLINYWKAGVCLGLFVDAFKLGS 205

BLAST of CsGy1G031030 vs. NCBI nr
Match: XP_023520636.1 (ycf20-like protein [Cucurbita pepo subsp. pepo] >XP_023520637.1 ycf20-like protein [Cucurbita pepo subsp. pepo] >XP_023520638.1 ycf20-like protein [Cucurbita pepo subsp. pepo] >XP_023520639.1 ycf20-like protein [Cucurbita pepo subsp. pepo] >XP_023520640.1 ycf20-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342.0 bits (876), Expect = 1.4e-90
Identity = 171/205 (83.41%), Postives = 186/205 (90.73%), Query Frame = 0

Query: 8   MGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPFPQKSLQT 67
           M A+I+ SRLLT ANY  +G CLT MPCLIH  GY AI NG +S+  LKS PFP+KS +T
Sbjct: 1   MEAMIMQSRLLTIANYISKGLCLTYMPCLIHNMGYVAILNGHNSTLCLKSVPFPRKSFRT 60

Query: 68  SRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF 127
           SRH  +LAFALDTGGVSS+GGGDN+DDG+ESNLGRTRLGRLVS+GARQLLEKLNSARKNF
Sbjct: 61  SRHLQQLAFALDTGGVSSNGGGDNLDDGNESNLGRTRLGRLVSAGARQLLEKLNSARKNF 120

Query: 128 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS 187
           PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMY+KPPPLLTRRLKS
Sbjct: 121 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYKKPPPLLTRRLKS 180

Query: 188 FIVMVNYWKAGVCLGLFVDAFKLGS 213
            IV++NYWKAGVCLGLFVDAFKLGS
Sbjct: 181 LIVLINYWKAGVCLGLFVDAFKLGS 205

BLAST of CsGy1G031030 vs. NCBI nr
Match: XP_022973215.1 (ycf20-like protein [Cucurbita maxima] >XP_022973224.1 ycf20-like protein [Cucurbita maxima] >XP_022973228.1 ycf20-like protein [Cucurbita maxima] >XP_022973233.1 ycf20-like protein [Cucurbita maxima] >XP_022973241.1 ycf20-like protein [Cucurbita maxima] >XP_022973250.1 ycf20-like protein [Cucurbita maxima])

HSP 1 Score: 340.9 bits (873), Expect = 3.1e-90
Identity = 171/205 (83.41%), Postives = 186/205 (90.73%), Query Frame = 0

Query: 8   MGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPFPQKSLQT 67
           M A+I+ SRLLT ANY  +G CLT MPCLIH   Y AI NG +S+  LKSAPFP+KS +T
Sbjct: 1   MEAMIMQSRLLTIANYISKGLCLTYMPCLIHNMDYVAILNGHNSTLCLKSAPFPRKSFRT 60

Query: 68  SRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF 127
           SRH  +LAFALDTGGVSS+GGGDN+DDG+ESNLGRTRLGRLVS+GARQLLEKLNSARKNF
Sbjct: 61  SRHLQQLAFALDTGGVSSNGGGDNLDDGNESNLGRTRLGRLVSAGARQLLEKLNSARKNF 120

Query: 128 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS 187
           PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMY+KPPPLLTRRLKS
Sbjct: 121 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYKKPPPLLTRRLKS 180

Query: 188 FIVMVNYWKAGVCLGLFVDAFKLGS 213
            IV++NYWKAGVCLGLFVDAFKLGS
Sbjct: 181 LIVLINYWKAGVCLGLFVDAFKLGS 205

BLAST of CsGy1G031030 vs. NCBI nr
Match: XP_022149955.1 (ycf20-like protein [Momordica charantia])

HSP 1 Score: 324.7 bits (831), Expect = 2.3e-85
Identity = 167/207 (80.68%), Postives = 183/207 (88.41%), Query Frame = 0

Query: 8   MGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPFPQKSLQT 67
           MGA+IL SRLL   +YS +GSCLTN+ CL++YWGY A+FN ++S+  LKSAPFP++S QT
Sbjct: 6   MGAMILQSRLLKIESYSSRGSCLTNISCLVYYWGYAAVFNAQNSTRCLKSAPFPRRSFQT 65

Query: 68  SRH--ANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARK 127
           SRH    KLAFALDT G+  +GG DN  DGDESNLGRTRLGRLVSS ARQLLEKLNSARK
Sbjct: 66  SRHLRKRKLAFALDTSGLPRNGGEDN-PDGDESNLGRTRLGRLVSSAARQLLEKLNSARK 125

Query: 128 NFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRL 187
           NFP KIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIE IG+LMYRKPPPLLTRRL
Sbjct: 126 NFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGVLMYRKPPPLLTRRL 185

Query: 188 KSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           KSFIVM+NYWKAGVCLGLFVDAFKLGS
Sbjct: 186 KSFIVMINYWKAGVCLGLFVDAFKLGS 211

BLAST of CsGy1G031030 vs. TAIR10
Match: AT1G65420.1 (Protein of unknown function (DUF565))

HSP 1 Score: 205.7 bits (522), Expect = 2.9e-53
Identity = 108/166 (65.06%), Postives = 130/166 (78.31%), Query Frame = 0

Query: 49  RSSSFLLKSAPFPQKSLQTSRHANKLAFALDTGGVSSSGGGDNID-DGDESNLGRTRLGR 108
           ++SS  L S P+P KS Q  R   K+AFALDTG       G+  + +GD + LG TRLGR
Sbjct: 32  KASSITLTSFPYPMKSFQIRRPNRKIAFALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGR 91

Query: 109 LVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIE 168
           +  +G +QLL K+NSARKNFP KIFLLLLGFYTANALATILGQTGDWDVLVAG+VVAAIE
Sbjct: 92  IAIAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIE 151

Query: 169 WIGILMYRKP-PPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
            IG+LMY+KP   + + +L+SF+V +N+WKAGVCLGLFVDAFKLGS
Sbjct: 152 GIGMLMYKKPSSSMFSGKLQSFVVFMNFWKAGVCLGLFVDAFKLGS 197

BLAST of CsGy1G031030 vs. TAIR10
Match: AT3G56830.1 (Protein of unknown function (DUF565))

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-25
Identity = 62/145 (42.76%), Postives = 89/145 (61.38%), Query Frame = 0

Query: 69  RHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRT----RLGRLVSSGARQLLEKLNSAR 128
           RH  ++++      + SS GGD  D    S+   +    RL + +     +LL K+   +
Sbjct: 48  RHQRRMSWTT----IKSSVGGDRFDPASGSSSNNSSRGLRLIKAIQVLRSKLLVKIQEIK 107

Query: 129 KNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRR 188
           K+ P K+F LL+GFY+A A +T +GQTGDWDVL AG+ V  +E IG LMYR   PL+  +
Sbjct: 108 KDLPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYRASIPLI-NK 167

Query: 189 LKSFIVMVNYWKAGVCLGLFVDAFK 210
           ++S I M NYWK G+ LGLF+D+FK
Sbjct: 168 MRSTITMFNYWKTGLALGLFLDSFK 187

BLAST of CsGy1G031030 vs. TAIR10
Match: AT5G43050.1 (Protein of unknown function (DUF565))

HSP 1 Score: 42.0 bits (97), Expect = 5.5e-04
Identity = 29/80 (36.25%), Postives = 41/80 (51.25%), Query Frame = 0

Query: 134 LLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKSF-IVMV 193
           LL GFY A  ++   G  G  DV+ A + V   E++    Y       +R   +F I ++
Sbjct: 86  LLGGFYVAQTISLSFGALGVNDVIAAVLCVLLTEYVTRFYY-------SRTTVTFPIALL 145

Query: 194 NYWKAGVCLGLFVDAFKLGS 213
           N +K G   GLF+DAFKL S
Sbjct: 146 NNFKMGFTYGLFIDAFKLAS 158

BLAST of CsGy1G031030 vs. Swiss-Prot
Match: sp|O80813|YC20L_ARATH (Ycf20-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g65420 PE=2 SV=2)

HSP 1 Score: 205.7 bits (522), Expect = 5.1e-52
Identity = 108/166 (65.06%), Postives = 130/166 (78.31%), Query Frame = 0

Query: 49  RSSSFLLKSAPFPQKSLQTSRHANKLAFALDTGGVSSSGGGDNID-DGDESNLGRTRLGR 108
           ++SS  L S P+P KS Q  R   K+AFALDTG       G+  + +GD + LG TRLGR
Sbjct: 32  KASSITLTSFPYPMKSFQIRRPNRKIAFALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGR 91

Query: 109 LVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIE 168
           +  +G +QLL K+NSARKNFP KIFLLLLGFYTANALATILGQTGDWDVLVAG+VVAAIE
Sbjct: 92  IAIAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIE 151

Query: 169 WIGILMYRKP-PPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
            IG+LMY+KP   + + +L+SF+V +N+WKAGVCLGLFVDAFKLGS
Sbjct: 152 GIGMLMYKKPSSSMFSGKLQSFVVFMNFWKAGVCLGLFVDAFKLGS 197

BLAST of CsGy1G031030 vs. Swiss-Prot
Match: sp|Q9MUL5|YCF20_MESVI (Uncharacterized protein ycf20 OS=Mesostigma viride OX=41882 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 57/118 (48.31%), Postives = 76/118 (64.41%), Query Frame = 0

Query: 100 LGRTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVA 159
           +  TRL    ++  + L  K+ +   NFP KI LLLLGF+ A  LAT+ GQTGDWDVLVA
Sbjct: 1   MSNTRLTLFFTNIFQLLDSKIQNYSINFPIKILLLLLGFFIATVLATVFGQTGDWDVLVA 60

Query: 160 GVVVAAIEWIGILMYRKPPPLLTRRLK---SF--IVMVNYWKAGVCLGLFVDAFKLGS 213
           G++VA IE +G  MY K    ++++     SF  ++ +NY K G+  GLFVDAFKLGS
Sbjct: 61  GILVAMIEILGNKMYSK--KYISKKQVFDISFLSLIGINYIKIGLIFGLFVDAFKLGS 116

BLAST of CsGy1G031030 vs. Swiss-Prot
Match: sp|Q1XDS2|YCF20_PYRYE (Uncharacterized protein ycf20 OS=Pyropia yezoensis OX=2788 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.1e-12
Identity = 43/111 (38.74%), Postives = 62/111 (55.86%), Query Frame = 0

Query: 102 RTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGV 161
           +TRL    +   + L  KL  +     T +  LLLGF+ +  L+TI GQTGDW ++ A +
Sbjct: 3   KTRLSTFFAYLIKNLNNKLYYSLSELTTGLISLLLGFFISTGLSTIPGQTGDWGIIAASL 62

Query: 162 VVAAIEWIGILMYRKPPPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           +VAA E    ++Y        ++L   I + N +K G+  GLFVDAFKLGS
Sbjct: 63  IVAATELTSKIVYSS-----HKQLNIKINLFNNFKIGITYGLFVDAFKLGS 108

BLAST of CsGy1G031030 vs. Swiss-Prot
Match: sp|P51214|YCF20_PORPU (Uncharacterized protein ycf20 OS=Porphyra purpurea OX=2787 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.0e-12
Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = 0

Query: 102 RTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGV 161
           RT+L    S   + L  +L  +       +  LLLGF+ +  L+TI GQTGDW ++ A +
Sbjct: 3   RTKLSIFFSYFVQNLSSRLYYSLNELTAGLISLLLGFFISTGLSTIPGQTGDWGIIAASL 62

Query: 162 VVAAIEWIGILMYRKPPPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           +VAAIE +  ++Y        R     I ++N  K G+  GLFVDAFKLGS
Sbjct: 63  IVAAIELVSKIVYSNKKKYGVR-----INLLNNLKIGITYGLFVDAFKLGS 108

BLAST of CsGy1G031030 vs. Swiss-Prot
Match: sp|P72983|YC20L_SYNY3 (Ycf20-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll1509 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07
Identity = 34/111 (30.63%), Postives = 55/111 (49.55%), Query Frame = 0

Query: 102 RTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGV 161
           RTRL  +V    +QL +   +  +     +   L GF+   A+AT  GQ   WDV+ A  
Sbjct: 3   RTRLNTIVEVRGQQLSQFFRNPWRRISLSLLSFLFGFFVGTAVATTAGQNSQWDVVCAAF 62

Query: 162 VVAAIEWIGILMYRKPPPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           ++   E +    YR+   +   + +    ++N +K GV   LF++AFKLGS
Sbjct: 63  ILLFCELVNRWFYRRGVKMGDLQAE----VLNIFKMGVSYSLFLEAFKLGS 109

BLAST of CsGy1G031030 vs. TrEMBL
Match: tr|A0A0A0LXR2|A0A0A0LXR2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G652280 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 8.6e-113
Identity = 209/212 (98.58%), Postives = 210/212 (99.06%), Query Frame = 0

Query: 1   MEVGIFQMGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPF 60
           MEVGIFQMGAVILHSRLLTTANYSPQ SCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPF
Sbjct: 1   MEVGIFQMGAVILHSRLLTTANYSPQVSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPF 60

Query: 61  PQKSLQTSRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKL 120
           P+KSLQTSRH NKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKL
Sbjct: 61  PRKSLQTSRHVNKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKL 120

Query: 121 NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPL 180
           NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPL
Sbjct: 121 NSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPL 180

Query: 181 LTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           LTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS
Sbjct: 181 LTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 212

BLAST of CsGy1G031030 vs. TrEMBL
Match: tr|A0A1S3B8Z3|A0A1S3B8Z3_CUCME (ycf20-like protein OS=Cucumis melo OX=3656 GN=LOC103487471 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.0e-73
Identity = 144/147 (97.96%), Postives = 146/147 (99.32%), Query Frame = 0

Query: 66  QTSRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARK 125
           QTSRH NK+AFALDTGGVSSSGGGDN+DDGDESNLGRTRLGRLVSSGARQLLEKLNSARK
Sbjct: 71  QTSRHVNKIAFALDTGGVSSSGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARK 130

Query: 126 NFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRL 185
           NFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRL
Sbjct: 131 NFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRL 190

Query: 186 KSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           KSFIVMVNYWKAGVCLGLFVDAFKLGS
Sbjct: 191 KSFIVMVNYWKAGVCLGLFVDAFKLGS 217

BLAST of CsGy1G031030 vs. TrEMBL
Match: tr|A0A061EXE3|A0A061EXE3_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_025117 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 7.2e-67
Identity = 142/207 (68.60%), Postives = 161/207 (77.78%), Query Frame = 0

Query: 7   QMGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPFPQKSLQ 66
           Q+G + L + L    N   + SC+T   C I  W  E    G++S   LKSA FP+KS  
Sbjct: 4   QVGRMYLQAGLSILENEVLESSCMTLATCAIQRWIIEPSICGQASKIGLKSALFPKKSFS 63

Query: 67  T-SRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARK 126
           T  RH  K+AFALDTGGVS  GG D++ + D SNLG TRLGR+VS+G+RQLLEKLNSARK
Sbjct: 64  TRKRHGWKIAFALDTGGVSGDGGEDSL-NSDSSNLGGTRLGRIVSAGSRQLLEKLNSARK 123

Query: 127 NFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRL 186
           NFP K+FLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIE IG+LMYRKPP L T RL
Sbjct: 124 NFPMKVFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYRKPPSLKTGRL 183

Query: 187 KSFIVMVNYWKAGVCLGLFVDAFKLGS 213
           +SF+VMVNYWKAGVCLGLFVDAFKLGS
Sbjct: 184 QSFVVMVNYWKAGVCLGLFVDAFKLGS 209

BLAST of CsGy1G031030 vs. TrEMBL
Match: tr|A0A1U8NUU7|A0A1U8NUU7_GOSHI (ycf20-like protein isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107951948 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.6e-64
Identity = 139/206 (67.48%), Postives = 155/206 (75.24%), Query Frame = 0

Query: 7   QMGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPFPQKSLQ 66
           Q+G + L + L  + N     SCLT   C I  W  E   +G+SS   LKS  FP+KS  
Sbjct: 4   QVGRINLQAGLSISENDVFASSCLTLATCAIQRWSNEYSLSGQSSKIGLKSLTFPRKSSS 63

Query: 67  TSRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKN 126
           T RH  K+A ALDTGGV   G G++  + D SNLG TRLGR+VS+G RQLLEKLNSARKN
Sbjct: 64  TKRHGWKIALALDTGGV--PGNGEDSLNSDSSNLGGTRLGRVVSAGGRQLLEKLNSARKN 123

Query: 127 FPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLK 186
           FP KIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIE IG+LMYRK P L T RL+
Sbjct: 124 FPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYRKSPSLKTGRLQ 183

Query: 187 SFIVMVNYWKAGVCLGLFVDAFKLGS 213
           S +VMVNYWKAGVCLGLFVDAFKLGS
Sbjct: 184 SIVVMVNYWKAGVCLGLFVDAFKLGS 207

BLAST of CsGy1G031030 vs. TrEMBL
Match: tr|A0A1U8NXB9|A0A1U8NXB9_GOSHI (ycf20-like protein isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107951948 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.6e-64
Identity = 139/206 (67.48%), Postives = 155/206 (75.24%), Query Frame = 0

Query: 7   QMGAVILHSRLLTTANYSPQGSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPFPQKSLQ 66
           Q+G + L + L  + N     SCLT   C I  W  E   +G+SS   LKS  FP+KS  
Sbjct: 8   QVGRINLQAGLSISENDVFASSCLTLATCAIQRWSNEYSLSGQSSKIGLKSLTFPRKSSS 67

Query: 67  TSRHANKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKN 126
           T RH  K+A ALDTGGV   G G++  + D SNLG TRLGR+VS+G RQLLEKLNSARKN
Sbjct: 68  TKRHGWKIALALDTGGV--PGNGEDSLNSDSSNLGGTRLGRVVSAGGRQLLEKLNSARKN 127

Query: 127 FPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLK 186
           FP KIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIE IG+LMYRK P L T RL+
Sbjct: 128 FPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYRKSPSLKTGRLQ 187

Query: 187 SFIVMVNYWKAGVCLGLFVDAFKLGS 213
           S +VMVNYWKAGVCLGLFVDAFKLGS
Sbjct: 188 SIVVMVNYWKAGVCLGLFVDAFKLGS 211

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004139097.11.3e-11298.58PREDICTED: ycf20-like protein [Cucumis sativus] >XP_011660206.1 PREDICTED: ycf20... [more]
XP_022924878.14.8e-9183.90ycf20-like protein [Cucurbita moschata] >XP_022924885.1 ycf20-like protein [Cucu... [more]
XP_023520636.11.4e-9083.41ycf20-like protein [Cucurbita pepo subsp. pepo] >XP_023520637.1 ycf20-like prote... [more]
XP_022973215.13.1e-9083.41ycf20-like protein [Cucurbita maxima] >XP_022973224.1 ycf20-like protein [Cucurb... [more]
XP_022149955.12.3e-8580.68ycf20-like protein [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT1G65420.12.9e-5365.06Protein of unknown function (DUF565)[more]
AT3G56830.11.5e-2542.76Protein of unknown function (DUF565)[more]
AT5G43050.15.5e-0436.25Protein of unknown function (DUF565)[more]
Match NameE-valueIdentityDescription
sp|O80813|YC20L_ARATH5.1e-5265.06Ycf20-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g65420 PE=2 SV=2[more]
sp|Q9MUL5|YCF20_MESVI1.3e-1848.31Uncharacterized protein ycf20 OS=Mesostigma viride OX=41882 GN=ycf20 PE=3 SV=1[more]
sp|Q1XDS2|YCF20_PYRYE3.1e-1238.74Uncharacterized protein ycf20 OS=Pyropia yezoensis OX=2788 GN=ycf20 PE=3 SV=1[more]
sp|P51214|YCF20_PORPU4.0e-1238.74Uncharacterized protein ycf20 OS=Porphyra purpurea OX=2787 GN=ycf20 PE=3 SV=1[more]
sp|P72983|YC20L_SYNY31.0e-0730.63Ycf20-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LXR2|A0A0A0LXR2_CUCSA8.6e-11398.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G652280 PE=4 SV=1[more]
tr|A0A1S3B8Z3|A0A1S3B8Z3_CUCME1.0e-7397.96ycf20-like protein OS=Cucumis melo OX=3656 GN=LOC103487471 PE=4 SV=1[more]
tr|A0A061EXE3|A0A061EXE3_THECC7.2e-6768.60Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_025117 PE=4 SV=1[more]
tr|A0A1U8NUU7|A0A1U8NUU7_GOSHI2.6e-6467.48ycf20-like protein isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107951948 PE=4... [more]
tr|A0A1U8NXB9|A0A1U8NXB9_GOSHI2.6e-6467.48ycf20-like protein isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107951948 PE=4... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007572Uncharacterised_Ycf20
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010196 nonphotochemical quenching
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G031030.1CsGy1G031030.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007572Uncharacterised protein family Ycf20PFAMPF04483DUF565coord: 150..212
e-value: 1.5E-21
score: 76.6
IPR007572Uncharacterised protein family Ycf20PANTHERPTHR33787FAMILY NOT NAMEDcoord: 7..212
NoneNo IPR availablePANTHERPTHR33787:SF4YCF20-LIKE PROTEINcoord: 7..212