Cucsa.260120 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.260120
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Locationscaffold02229 : 6400940 .. 6401540 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCAAGATTCTCATCCCGATACTACTCAAAAAGAACTCGCCGCTCTGTTTGCGCATGCATCTCCATCTTCCTCCTCGTAATTGGTGTCGTGGCTCTCACTCTGTGGCTTGTCTACCGCCCCATTGACCCTCAATTCACCGTGGTTGGAGCCGCAATATATGACCTCAACATGTCATCTCTTCCGCTGCTGTCTACAACCATGCAATTCACAATCGTTACGAGGAACCCCAACAGGCGAGTTTCCATTTATTACGACAGACTGACTGTCTTTGTGTCGTATAGGAACCAGCAGATAACGTCGCAGGTGATATTGCCTCCGCTGGCTCACGAAAAGCGGAGCACAGTTGCGATGTCTCCAGTACTAGGCGGTGGGGCGGTGGCAGTGTCGTTGGAGGTGGCAAATGGGTTGGTAACGGATCAAACAATTGGAGTTTTAGGGTTGAGAGTAGTGTTGTTGGGTAGACTAAGATGGAAAGCTGGGCCACTAAAGACTGGACGTTATTCAGTATATGTAAAATGTGATGTGTTGGTGGGTGTGAAAAGAGGCTTGGTGGGTCAACTTCCCATGCTTGCCTCTCCCCCTTGCAAAGTTGATATCTAG

mRNA sequence

AGCAAGATTCTCATCCCGATACTACTCAAAAAGAACTCGCCGCTCTGTTTGCGCATGCATCTCCATCTTCCTCCTCGTAATTGGTGTCGTGGCTCTCACTCTGTGGCTTGTCTACCGCCCCATTGACCCTCAATTCACCGTGGTTGGAGCCGCAATATATGACCTCAACATGTCATCTCTTCCGCTGCTGTCTACAACCATGCAATTCACAATCGTTACGAGGAACCCCAACAGGCGAGTTTCCATTTATTACGACAGACTGACTGTCTTTGTGTCGTATAGGAACCAGCAGATAACGTCGCAGGTGATATTGCCTCCGCTGGCTCACGAAAAGCGGAGCACAGTTGCGATGTCTCCAGTACTAGGCGGTGGGGCGGTGGCAGTGTCGTTGGAGGTGGCAAATGGGTTGGTAACGGATCAAACAATTGGAGTTTTAGGGTTGAGAGTAGTGTTGTTGGGTAGACTAAGATGGAAAGCTGGGCCACTAAAGACTGGACGTTATTCAGTATATGTAAAATGTGATGTGTTGGTGGGTGTGAAAAGAGGCTTGGTGGGTCAACTTCCCATGCTTGCCTCTCCCCCTTGCAAAGTTGATATCTAG

Coding sequence (CDS)

AGCAAGATTCTCATCCCGATACTACTCAAAAAGAACTCGCCGCTCTGTTTGCGCATGCATCTCCATCTTCCTCCTCGTAATTGGTGTCGTGGCTCTCACTCTGTGGCTTGTCTACCGCCCCATTGACCCTCAATTCACCGTGGTTGGAGCCGCAATATATGACCTCAACATGTCATCTCTTCCGCTGCTGTCTACAACCATGCAATTCACAATCGTTACGAGGAACCCCAACAGGCGAGTTTCCATTTATTACGACAGACTGACTGTCTTTGTGTCGTATAGGAACCAGCAGATAACGTCGCAGGTGATATTGCCTCCGCTGGCTCACGAAAAGCGGAGCACAGTTGCGATGTCTCCAGTACTAGGCGGTGGGGCGGTGGCAGTGTCGTTGGAGGTGGCAAATGGGTTGGTAACGGATCAAACAATTGGAGTTTTAGGGTTGAGAGTAGTGTTGTTGGGTAGACTAAGATGGAAAGCTGGGCCACTAAAGACTGGACGTTATTCAGTATATGTAAAATGTGATGTGTTGGTGGGTGTGAAAAGAGGCTTGGTGGGTCAACTTCCCATGCTTGCCTCTCCCCCTTGCAAAGTTGATATCTAG

Protein sequence

ARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASPPCKVDI*
Homology
[Close]
BLAST of Cucsa.260120 vs. Swiss-Prot
Match: NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-26
Identity = 58/168 (34.52%), Postives = 95/168 (56.55%), Query Frame = 1 

Query: 12  TRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTI 71
           T   +C  I  F++++ +    +W++ +P  P+F +  A +Y  N+S   LL++  Q TI
Sbjct: 17  TASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITI 76

Query: 72  VTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLE 131
            +RN N R+ IYYDRL V+ +YRNQQIT +  +PP     +     SP + G +V ++  
Sbjct: 77  ASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPF 136

Query: 132 VANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGV 180
            A  L  +Q  G + L +   GR+RWK G L TG+Y ++V+C   + +
Sbjct: 137 NAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINL 184

[Close]
BLAST of Cucsa.260120 vs. Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.3e-13
Identity = 50/179 (27.93%), Postives = 84/179 (46.93%), Query Frame = 1 

Query: 8   YSKRTRRSVCAC--ISIF-------LLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMS 67
           Y +R     C C  +S+F       ++++GV AL  WL+ RP   +F V  A++   + +
Sbjct: 24  YYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHT 83

Query: 68  SLP-LLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAM 127
           S   +L   +  T+  RNPN+R+ +YYDR+     Y  ++ ++  + P     K +TV  
Sbjct: 84  SPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLT 143

Query: 128 SPVLGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVL 177
               G   V  +   +  L  ++  GV  + +    R+R+K G LK  R    V CD L
Sbjct: 144 PTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDL 202

[Close]
BLAST of Cucsa.260120 vs. Swiss-Prot
Match: NHL3_ARATH (NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-10
Identity = 42/154 (27.27%), Postives = 74/154 (48.05%), Query Frame = 1 

Query: 25  LVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRNPNRRVSIYY 84
           +++G+ AL +WL++RP   +F V  A + +  +     L   +      RNPNRR+ +YY
Sbjct: 57  VLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYY 116

Query: 85  DRLTVFVSYRNQQI-TSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANGLVTDQTIG 144
           D + V   Y +Q+   S  I       K +TV  + ++G   V +       L  D    
Sbjct: 117 DEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQ 176

Query: 145 VLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLV 178
           +  +   L  ++R+K G +K+ R+   +KCD+ V
Sbjct: 177 IYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKV 210

[Close]
BLAST of Cucsa.260120 vs. TrEMBL
Match: A0A0A0L882_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116630 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 6.8e-106
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1 

Query: 1   ARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSL 60
           ARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSL
Sbjct: 24  ARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSL 83

Query: 61  PLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPV 120
           PLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPV
Sbjct: 84  PLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPV 143

Query: 121 LGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVK 180
           LGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVK
Sbjct: 144 LGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVK 203

Query: 181 RGLVGQLPMLASPPCKVDI 200
           RGLVGQLPMLASPPCKVDI
Sbjct: 204 RGLVGQLPMLASPPCKVDI 222

[Close]
BLAST of Cucsa.260120 vs. TrEMBL
Match: M5X269_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011309mg PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 9.0e-74
Identity = 139/196 (70.92%), Postives = 160/196 (81.63%), Query Frame = 1 

Query: 4   SSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLL 63
           SS  Y+    RS+C C+SIFLL+ GV ALTLWLVYRP  PQFTVVGAA+YDLN +S PL+
Sbjct: 20  SSPIYTSGPYRSICTCLSIFLLLAGVTALTLWLVYRPHKPQFTVVGAAVYDLNATSPPLI 79

Query: 64  STTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGG 123
           STTMQFT+VT NPNRRVSIYYDRL  FVSY+NQ IT QV LP L HE RSTVA+SPVLGG
Sbjct: 80  STTMQFTLVTHNPNRRVSIYYDRLYAFVSYKNQAITPQVALPSLVHEHRSTVAVSPVLGG 139

Query: 124 GAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGL 183
            AV VSLEV NGL  D+  GV+GLRVV++GRLRWKAG ++T  Y VYVKCDVLVG+KRG 
Sbjct: 140 RAVPVSLEVVNGLTMDEAYGVVGLRVVVMGRLRWKAGAIRTAHYGVYVKCDVLVGLKRGF 199

Query: 184 VGQLPMLASPPCKVDI 200
           VGQ+P+L +P C+VDI
Sbjct: 200 VGQVPLLGNPSCQVDI 215

[Close]
BLAST of Cucsa.260120 vs. TrEMBL
Match: B9RNK9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1339920 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.3e-69
Identity = 127/192 (66.15%), Postives = 158/192 (82.29%), Query Frame = 1 

Query: 8   YSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTM 67
           Y    RR++C  I+IFLL+ G+    +WL+YRP  P+FTV+GAAIYDLN +S P +S +M
Sbjct: 35  YKSDPRRTICTVITIFLLLAGLAVFIVWLIYRPHKPRFTVLGAAIYDLNTTSPPFVSASM 94

Query: 68  QFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVA 127
           QFTIVTRNPN+RV+I YD+L+ +VSYRNQ IT  V+LPPL H+K+STVA+SPVLGG  V 
Sbjct: 95  QFTIVTRNPNKRVAIIYDKLSAYVSYRNQAITPTVVLPPLYHDKKSTVALSPVLGGAQVP 154

Query: 128 VSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGLVGQL 187
           VS+EVANGLV D++ GV+ LRVVLLGRLRWKAG +KTGRY VYVKCD+ VG+KRGLVGQ+
Sbjct: 155 VSVEVANGLVMDESYGVVALRVVLLGRLRWKAGVIKTGRYGVYVKCDIWVGLKRGLVGQV 214

Query: 188 PMLASPPCKVDI 200
           P+L SP CKVD+
Sbjct: 215 PLLGSPQCKVDV 226

[Close]
BLAST of Cucsa.260120 vs. TrEMBL
Match: A5BJJ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027904 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.3e-69
Identity = 134/195 (68.72%), Postives = 155/195 (79.49%), Query Frame = 1 

Query: 5   SRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLS 64
           S Y  K  RR+ C  I I LL+ G+ AL +WLVYRP +PQFTV+G AIYDLN +S PL+S
Sbjct: 797 SPYRPKDPRRACCTFIFILLLLAGITALVVWLVYRPQEPQFTVMGVAIYDLNTTSPPLIS 856

Query: 65  TTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGG 124
           T MQFTIVTRNPN+RVSIYYDRL+ FVSYRNQ IT   +LPPL H K STVA+SPVLGG 
Sbjct: 857 TNMQFTIVTRNPNKRVSIYYDRLSAFVSYRNQAITPPAMLPPLYHRKHSTVALSPVLGGE 916

Query: 125 AVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGLV 184
           AV VSLEVANGLV D+  GV+GLR+VLLGRL+WKAG   +  Y VYVKCDVLVG+K+G+V
Sbjct: 917 AVPVSLEVANGLVMDEAYGVMGLRLVLLGRLKWKAGAFWSMHYGVYVKCDVLVGLKKGVV 976

Query: 185 GQLPMLASPPCKVDI 200
           GQ+PML SP C VDI
Sbjct: 977 GQVPMLGSPXCNVDI 991

[Close]
BLAST of Cucsa.260120 vs. TrEMBL
Match: F6I2Y6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02530 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.9e-69
Identity = 134/195 (68.72%), Postives = 155/195 (79.49%), Query Frame = 1 

Query: 5   SRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLS 64
           S Y  K  RR+ C  I I LL+ G+ AL +WLVYRP +PQFTV+G AIYDLN +S PL+S
Sbjct: 8   SPYRPKDPRRACCTFIFILLLLAGITALVVWLVYRPQEPQFTVMGVAIYDLNTTSPPLIS 67

Query: 65  TTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGG 124
           T MQFTIVTRNPN+RVSIYYDRL+ FVSYRNQ IT   +LPPL H K STVA+SPVLGG 
Sbjct: 68  TNMQFTIVTRNPNKRVSIYYDRLSAFVSYRNQAITPPAMLPPLYHRKHSTVALSPVLGGE 127

Query: 125 AVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGLV 184
           AV VSLEVANGLV D+  GV+GLR+VLLGRL+WKAG   +  Y VYVKCDVLVG+K+G+V
Sbjct: 128 AVPVSLEVANGLVMDEAYGVMGLRLVLLGRLKWKAGAFWSMHYGVYVKCDVLVGLKKGVV 187

Query: 185 GQLPMLASPPCKVDI 200
           GQ+PML SP C VDI
Sbjct: 188 GQVPMLGSPLCNVDI 202

[Close]
BLAST of Cucsa.260120 vs. TAIR10
Match: AT4G01410.1 (AT4G01410.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 217.2 bits (552), Expect = 8.9e-57
Identity = 101/187 (54.01%), Postives = 141/187 (75.40%), Query Frame = 1 

Query: 13  RRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIV 72
           RR++C  I   L+++G++AL LWLVYRP  P+ TVVGAAIYDLN ++ PL+ST++QF+++
Sbjct: 41  RRAICGAIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVL 100

Query: 73  TRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEV 132
            RNPNRRVSI+YD+L+++V+Y++Q IT  + LPPL    +STV ++PV+GG  + VS EV
Sbjct: 101 ARNPNRRVSIHYDKLSMYVTYKDQIITPPLPLPPLRLGHKSTVVIAPVMGGNGIPVSPEV 160

Query: 133 ANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLAS 192
           ANGL  D+  GV+ +RVV+ GRLRWKAG +KTGRY  Y +CDV +       GQ+P+LA 
Sbjct: 161 ANGLKNDEAYGVVLMRVVIFGRLRWKAGAIKTGRYGFYARCDVWLRFNPSSNGQVPLLAP 220

Query: 193 PPCKVDI 200
             CKVD+
Sbjct: 221 STCKVDV 227

[Close]
BLAST of Cucsa.260120 vs. TAIR10
Match: AT3G52470.1 (AT3G52470.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 123.6 bits (309), Expect = 1.3e-28
Identity = 59/174 (33.91%), Postives = 97/174 (55.75%), Query Frame = 1 

Query: 14  RSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVT 73
           R +CA I  F++++ +    +W++ RP  P+F +  A +Y  N+S   LL++  Q TI +
Sbjct: 17  RKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLSQPNLLTSNFQVTIAS 76

Query: 74  RNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVA 133
           RNPN ++ IYYDRL V+ +Y NQQIT +  +PP     +     SP + G AV ++   +
Sbjct: 77  RNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWSPFVYGTAVPIAPYNS 136

Query: 134 NGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGLVGQL 188
             L  ++  G +GL +   G +RWK   L TG+Y ++V+C   + +     G L
Sbjct: 137 VALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFINLGNKAAGVL 190

[Close]
BLAST of Cucsa.260120 vs. TAIR10
Match: AT2G35960.1 (AT2G35960.1 NDR1/HIN1-like 12)

HSP 1 Score: 120.9 bits (302), Expect = 8.7e-28
Identity = 58/168 (34.52%), Postives = 95/168 (56.55%), Query Frame = 1 

Query: 12  TRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTI 71
           T   +C  I  F++++ +    +W++ +P  P+F +  A +Y  N+S   LL++  Q TI
Sbjct: 17  TASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITI 76

Query: 72  VTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLE 131
            +RN N R+ IYYDRL V+ +YRNQQIT +  +PP     +     SP + G +V ++  
Sbjct: 77  ASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPF 136

Query: 132 VANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGV 180
            A  L  +Q  G + L +   GR+RWK G L TG+Y ++V+C   + +
Sbjct: 137 NAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINL 184

[Close]
BLAST of Cucsa.260120 vs. TAIR10
Match: AT5G06330.1 (AT5G06330.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 120.9 bits (302), Expect = 8.7e-28
Identity = 70/196 (35.71%), Postives = 108/196 (55.10%), Query Frame = 1 

Query: 8   YSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLP--LLST 67
           +S   R+ V   ISI LL+I VV L +W + +P  P+F +  A +++ N+S  P  LL++
Sbjct: 12  HSSCNRKIVIWTISIILLLILVVILLVWAILQPSKPRFVLQDATVFNFNVSGNPPNLLTS 71

Query: 68  TMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGA 127
             QFT+ +RNPN ++ IYYDRL V+ SYR+QQIT    +       +     SP +GG +
Sbjct: 72  NFQFTLSSRNPNDKIGIYYDRLDVYASYRSQQITLPSPMLTTYQGHKEVNVWSPFVGGYS 131

Query: 128 VAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGLVG 187
           V V+   A  L  D + G + L + L GR+RWK G   TG+Y ++V+C  L+       G
Sbjct: 132 VPVAPYNAFYLDQDHSSGAIMLMLHLDGRVRWKVGSFITGKYHLHVRCHALINFGSSAAG 191

Query: 188 QL--PMLASPPCKVDI 200
            +    + +  C V +
Sbjct: 192 VIVGKYMLTETCSVSV 207

[Close]
BLAST of Cucsa.260120 vs. TAIR10
Match: AT4G09590.1 (AT4G09590.1 NDR1/HIN1-like 22)

HSP 1 Score: 114.8 bits (286), Expect = 6.2e-26
Identity = 55/162 (33.95%), Postives = 88/162 (54.32%), Query Frame = 1 

Query: 16  VCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVTRN 75
           +C  I  F++++ +    +W++ +P +P+F +    +Y  N+S   LL++  Q TI +RN
Sbjct: 22  ICGAIIGFIIIVLMTIFLVWIILQPKNPEFILQDTTVYAFNLSQPNLLTSKFQITIASRN 81

Query: 76  PNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVANG 135
            N  + IYYD L  + SYRNQQIT    LPP     +     SP+L G  V ++   A  
Sbjct: 82  RNSNIGIYYDHLHAYASYRNQQITLASDLPPTYQRHKEDSVWSPLLYGNQVPIAPFNAVA 141

Query: 136 LVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLV 178
           L  +Q  GV  L + + G++RWK G L  G Y ++V+C   +
Sbjct: 142 LGDEQNSGVFTLTICVDGQVRWKVGTLTIGNYHLHVRCQAFI 183

[Close]
BLAST of Cucsa.260120 vs. NCBI nr
Match: gi|449431934|ref|XP_004133755.1| (PREDICTED: protein YLS9-like [Cucumis sativus])

HSP 1 Score: 391.3 bits (1004), Expect = 9.8e-106
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1 

Query: 1   ARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSL 60
           ARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSL
Sbjct: 24  ARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSL 83

Query: 61  PLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPV 120
           PLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPV
Sbjct: 84  PLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPV 143

Query: 121 LGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVK 180
           LGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVK
Sbjct: 144 LGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVK 203

Query: 181 RGLVGQLPMLASPPCKVDI 200
           RGLVGQLPMLASPPCKVDI
Sbjct: 204 RGLVGQLPMLASPPCKVDI 222

[Close]
BLAST of Cucsa.260120 vs. NCBI nr
Match: gi|659074695|ref|XP_008437747.1| (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 384.0 bits (985), Expect = 1.6e-103
Identity = 193/199 (96.98%), Postives = 197/199 (98.99%), Query Frame = 1 

Query: 1   ARFSSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSL 60
           ARFS RYYSK TRRSVCACISIFLL+IGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSL
Sbjct: 24  ARFSHRYYSKSTRRSVCACISIFLLIIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSL 83

Query: 61  PLLSTTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPV 120
           PLLSTTMQFTIVTRNPNRRVSIYYDRLT+FVSYRNQQITSQVILPPLAHEKRSTVAMSPV
Sbjct: 84  PLLSTTMQFTIVTRNPNRRVSIYYDRLTIFVSYRNQQITSQVILPPLAHEKRSTVAMSPV 143

Query: 121 LGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVK 180
           LGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRY+VYVKCDVL+GVK
Sbjct: 144 LGGGAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYAVYVKCDVLMGVK 203

Query: 181 RGLVGQLPMLASPPCKVDI 200
           RGLVGQLPMLASPPCKVDI
Sbjct: 204 RGLVGQLPMLASPPCKVDI 222

[Close]
BLAST of Cucsa.260120 vs. NCBI nr
Match: gi|694380987|ref|XP_009366593.1| (PREDICTED: protein YLS9 [Pyrus x bretschneideri])

HSP 1 Score: 285.0 bits (728), Expect = 9.9e-74
Identity = 134/186 (72.04%), Postives = 160/186 (86.02%), Query Frame = 1 

Query: 14  RSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLLSTTMQFTIVT 73
           R++C C+SIFLL+ GV ALTLWLVYRP  PQFT+VGAA+Y LN++S PL+STTMQFTIVT
Sbjct: 28  RALCTCLSIFLLLAGVTALTLWLVYRPHKPQFTIVGAAVYSLNVTSPPLISTTMQFTIVT 87

Query: 74  RNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGGGAVAVSLEVA 133
           RNPNRRVSIYYDRL+ FV+Y+NQ IT QV LPPL HE RSTVA+SPVLGGG V V++EV 
Sbjct: 88  RNPNRRVSIYYDRLSAFVAYKNQAITPQVTLPPLVHEHRSTVAVSPVLGGGEVPVAVEVV 147

Query: 134 NGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGLVGQLPMLASP 193
           NGLV D+  GV+GLRVV+ GRLRWKAG ++TG Y +YVKCDVLVG+K+G VGQ+P+L +P
Sbjct: 148 NGLVMDEVYGVVGLRVVVTGRLRWKAGAIRTGHYGIYVKCDVLVGLKKGFVGQVPLLGNP 207

Query: 194 PCKVDI 200
            CKVDI
Sbjct: 208 ACKVDI 213

[Close]
BLAST of Cucsa.260120 vs. NCBI nr
Match: gi|596005536|ref|XP_007218377.1| (hypothetical protein PRUPE_ppa011309mg [Prunus persica])

HSP 1 Score: 284.6 bits (727), Expect = 1.3e-73
Identity = 139/196 (70.92%), Postives = 160/196 (81.63%), Query Frame = 1 

Query: 4   SSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLL 63
           SS  Y+    RS+C C+SIFLL+ GV ALTLWLVYRP  PQFTVVGAA+YDLN +S PL+
Sbjct: 20  SSPIYTSGPYRSICTCLSIFLLLAGVTALTLWLVYRPHKPQFTVVGAAVYDLNATSPPLI 79

Query: 64  STTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGG 123
           STTMQFT+VT NPNRRVSIYYDRL  FVSY+NQ IT QV LP L HE RSTVA+SPVLGG
Sbjct: 80  STTMQFTLVTHNPNRRVSIYYDRLYAFVSYKNQAITPQVALPSLVHEHRSTVAVSPVLGG 139

Query: 124 GAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGL 183
            AV VSLEV NGL  D+  GV+GLRVV++GRLRWKAG ++T  Y VYVKCDVLVG+KRG 
Sbjct: 140 RAVPVSLEVVNGLTMDEAYGVVGLRVVVMGRLRWKAGAIRTAHYGVYVKCDVLVGLKRGF 199

Query: 184 VGQLPMLASPPCKVDI 200
           VGQ+P+L +P C+VDI
Sbjct: 200 VGQVPLLGNPSCQVDI 215

[Close]
BLAST of Cucsa.260120 vs. NCBI nr
Match: gi|645284125|ref|XP_008245646.1| (PREDICTED: protein YLS9 [Prunus mume])

HSP 1 Score: 283.9 bits (725), Expect = 2.2e-73
Identity = 139/196 (70.92%), Postives = 159/196 (81.12%), Query Frame = 1 

Query: 4   SSRYYSKRTRRSVCACISIFLLVIGVVALTLWLVYRPIDPQFTVVGAAIYDLNMSSLPLL 63
           SS  Y     RS+C C+SIFLL+ GV ALTLWLVYRP  PQFTVVGAA+YDLN +S PL+
Sbjct: 36  SSPIYPSGPYRSICTCLSIFLLLAGVTALTLWLVYRPHKPQFTVVGAAVYDLNATSPPLI 95

Query: 64  STTMQFTIVTRNPNRRVSIYYDRLTVFVSYRNQQITSQVILPPLAHEKRSTVAMSPVLGG 123
           STTMQFT+VT NPNRRVSIYYDRL  FVSY+NQ IT QV LP L HE RSTVA+SPVLGG
Sbjct: 96  STTMQFTLVTHNPNRRVSIYYDRLYAFVSYKNQAITPQVALPSLVHEHRSTVAVSPVLGG 155

Query: 124 GAVAVSLEVANGLVTDQTIGVLGLRVVLLGRLRWKAGPLKTGRYSVYVKCDVLVGVKRGL 183
            AV VSLEV NGL  D+  GV+GLRVV++GRLRWKAG ++T  Y VYVKCDVLVG+KRG 
Sbjct: 156 RAVPVSLEVVNGLTMDEAYGVVGLRVVVMGRLRWKAGAIRTAHYGVYVKCDVLVGLKRGF 215

Query: 184 VGQLPMLASPPCKVDI 200
           VGQ+P+L +P C+VDI
Sbjct: 216 VGQVPLLGNPSCQVDI 231

The following BLAST results are available for this feature:
BLAST of Cucsa.260120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NHL12_ARATH1.5e-2634.52NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1[more]
YLS9_ARATH3.3e-1327.93Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1[more]
NHL3_ARATH1.6e-1027.27NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1[more]
BLAST of Cucsa.260120 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L882_CUCSA6.8e-106100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116630 PE=4 SV=1[more]
M5X269_PRUPE9.0e-7470.92Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011309mg PE=4 SV=1[more]
B9RNK9_RICCO2.3e-6966.15Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1339920 PE=4 SV=1[more]
A5BJJ5_VITVI2.3e-6968.72Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027904 PE=4 SV=1[more]
F6I2Y6_VITVI3.9e-6968.72Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02530 PE=4 SV=... [more]
BLAST of Cucsa.260120 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G01410.18.9e-5754.01 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT3G52470.11.3e-2833.91 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT2G35960.18.7e-2834.52 NDR1/HIN1-like 12[more]
AT5G06330.18.7e-2835.71 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT4G09590.16.2e-2633.95 NDR1/HIN1-like 22[more]
BLAST of Cucsa.260120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449431934|ref|XP_004133755.1|9.8e-106100.00PREDICTED: protein YLS9-like [Cucumis sativus][more]
gi|659074695|ref|XP_008437747.1|1.6e-10396.98PREDICTED: protein YLS9-like [Cucumis melo][more]
gi|694380987|ref|XP_009366593.1|9.9e-7472.04PREDICTED: protein YLS9 [Pyrus x bretschneideri][more]
gi|596005536|ref|XP_007218377.1|1.3e-7370.92hypothetical protein PRUPE_ppa011309mg [Prunus persica][more]
gi|645284125|ref|XP_008245646.1|2.2e-7370.92PREDICTED: protein YLS9 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000160 phosphorelay signal transduction system
cellular_component GO:0005622 intracellular
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.260120.1Cucsa.260120.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA-14PFAMPF03168LEA_2coord: 74..173
score: 7.
NoneNo IPR availablePANTHERPTHR31415FAMILY NOT NAMEDcoord: 8..199
score: 6.3E
NoneNo IPR availablePANTHERPTHR31415:SF9SUBFAMILY NOT NAMEDcoord: 8..199
score: 6.3E